Miyakogusa Predicted Gene

Lj4g3v1034400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1034400.1 Non Chatacterized Hit- tr|I1JCI6|I1JCI6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11890
PE,86.18,0,PMSR,Peptide methionine sulphoxide reductase MsrA; Peptide
methionine sulfoxide reductase,Peptide me,CUFF.48289.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18030.1 | Symbols:  | Peptide methionine sulfoxide reductase...   356   9e-99
AT2G18030.2 | Symbols:  | Peptide methionine sulfoxide reductase...   246   1e-65
AT5G61640.1 | Symbols: PMSR1, ATMSRA1 | peptidemethionine sulfox...   110   8e-25
AT5G07470.1 | Symbols: PMSR3, ATMSRA3 | peptidemethionine sulfox...   105   4e-23
AT5G07460.1 | Symbols: PMSR2, ATMSRA2 | peptidemethionine sulfox...   104   5e-23
AT4G25130.1 | Symbols: PMSR4 | peptide met sulfoxide reductase 4...   104   6e-23

>AT2G18030.1 | Symbols:  | Peptide methionine sulfoxide reductase
           family protein | chr2:7840207-7841496 FORWARD LENGTH=254
          Length = 254

 Score =  356 bits (913), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 165/238 (69%), Positives = 199/238 (83%), Gaps = 1/238 (0%)

Query: 11  VFIIVLIASLFDDALCIRFPDRVAQPARDPPDQQRLQTAVFALGSFWRSEAVFGCIPGVV 70
           VF   L  SL D  + IR  ++++    D PD+  L++AVFALGSFWRSEA FGCI GVV
Sbjct: 18  VFFFFLCVSLLDKTVSIRISNQISDTVVDSPDRP-LKSAVFALGSFWRSEAAFGCINGVV 76

Query: 71  RTTVGYAGGSKPHPEYRSLADHAESVQVEYDTRLISFRELIDIFWSSHDPRQVYGQGPDV 130
           RT+ GYAGG+K +PEYR+L DHAESVQVEYD R+I +R+L+D+FWSSHD RQV+GQGPDV
Sbjct: 77  RTSAGYAGGTKTNPEYRNLGDHAESVQVEYDPRIIGYRQLLDVFWSSHDSRQVFGQGPDV 136

Query: 131 GNQYRSIIFVNGTEESRMAAVSKEQEQTRSRSSIVTTQILQLGTFYPAEPEHQKFELKQN 190
           GNQYRS IF N TEE R+A+ SKE+EQ  +RSSIVTTQI QLGTFY AEP+HQKFELKQ+
Sbjct: 137 GNQYRSCIFTNSTEELRLASTSKEREQLNTRSSIVTTQIQQLGTFYRAEPDHQKFELKQH 196

Query: 191 TFLLQLIGNLPEEELERSSLATKLNGYVAELCPPNIQKHIDAKINEIIKKGWPILREL 248
            FL+QLIGN+ EEELERS+LATKLNGY AELCPP IQKHID+++NEII+KGWP+LR++
Sbjct: 197 PFLIQLIGNMVEEELERSALATKLNGYAAELCPPRIQKHIDSRVNEIIRKGWPVLRDI 254


>AT2G18030.2 | Symbols:  | Peptide methionine sulfoxide reductase
           family protein | chr2:7840207-7841206 FORWARD LENGTH=192
          Length = 192

 Score =  246 bits (627), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 115/173 (66%), Positives = 138/173 (79%), Gaps = 1/173 (0%)

Query: 11  VFIIVLIASLFDDALCIRFPDRVAQPARDPPDQQRLQTAVFALGSFWRSEAVFGCIPGVV 70
           VF   L  SL D  + IR  ++++    D PD+  L++AVFALGSFWRSEA FGCI GVV
Sbjct: 18  VFFFFLCVSLLDKTVSIRISNQISDTVVDSPDRP-LKSAVFALGSFWRSEAAFGCINGVV 76

Query: 71  RTTVGYAGGSKPHPEYRSLADHAESVQVEYDTRLISFRELIDIFWSSHDPRQVYGQGPDV 130
           RT+ GYAGG+K +PEYR+L DHAESVQVEYD R+I +R+L+D+FWSSHD RQV+GQGPDV
Sbjct: 77  RTSAGYAGGTKTNPEYRNLGDHAESVQVEYDPRIIGYRQLLDVFWSSHDSRQVFGQGPDV 136

Query: 131 GNQYRSIIFVNGTEESRMAAVSKEQEQTRSRSSIVTTQILQLGTFYPAEPEHQ 183
           GNQYRS IF N TEE R+A+ SKE+EQ  +RSSIVTTQI QLGTFY AEP+HQ
Sbjct: 137 GNQYRSCIFTNSTEELRLASTSKEREQLNTRSSIVTTQIQQLGTFYRAEPDHQ 189


>AT5G61640.1 | Symbols: PMSR1, ATMSRA1 | peptidemethionine sulfoxide
           reductase 1 | chr5:24775107-24776147 FORWARD LENGTH=202
          Length = 202

 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 5/170 (2%)

Query: 30  PDRVAQPARDPPDQQRLQTAVFALGSFWRSEAVFGCIPGVVRTTVGYAGGSKPHPEYRSL 89
           P  +AQ   D       Q   F  G FW  E  +  +PGV +T VGY+ G    P Y+ +
Sbjct: 19  PSPIAQVIDDEAPAPGNQFTQFGAGCFWSVELAYQRVPGVTQTEVGYSQGITHDPSYKDV 78

Query: 90  A----DHAESVQVEYDTRLISFRELIDIFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEE 145
                +HAE V+V+YD +  S++ L+D+FWS HDP  +  QG DVG QYRS I+    E+
Sbjct: 79  CSGTTNHAEIVRVQYDPKECSYQSLLDLFWSKHDPTTLNRQGNDVGTQYRSGIYFYNPEQ 138

Query: 146 SRMAAVSKEQEQTRSRSSIVTTQILQLGTFYPAEPEHQKFELKQNTFLLQ 195
            ++A  S E+ Q +    +V T+IL    FY AE  HQ++  K   F L+
Sbjct: 139 EKLARESLERHQQQVDRKVV-TEILPAKKFYRAEEHHQQYLSKGGRFGLK 187


>AT5G07470.1 | Symbols: PMSR3, ATMSRA3 | peptidemethionine sulfoxide
           reductase 3 | chr5:2362760-2364286 REVERSE LENGTH=202
          Length = 202

 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 5/167 (2%)

Query: 30  PDRVAQPARDPPDQQRLQTAVFALGSFWRSEAVFGCIPGVVRTTVGYAGGSKPHPEYRSL 89
           P  +AQ   D       Q A F  G FW  E  F  +PGV +T  GY  G+  +P Y  +
Sbjct: 19  PSPIAQGNDDDTPAPGNQFAQFGAGCFWGVELAFQRVPGVTQTEAGYTQGTVDNPSYGDV 78

Query: 90  AD----HAESVQVEYDTRLISFRELIDIFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEE 145
                 H+E V+V+YD    ++  L+D+FWS HDP  +  QG DVG QYRS I+    E+
Sbjct: 79  CSGTTGHSEVVRVQYDLNDCTYESLLDLFWSRHDPTTLNRQGNDVGTQYRSGIYFYTPEQ 138

Query: 146 SRMAAVSKEQEQTRSRSSIVTTQILQLGTFYPAEPEHQKFELKQNTF 192
            ++A  S E+ Q +    I+ T+IL    FY AE  HQ++  K   F
Sbjct: 139 EKLARESLERHQQQMERKIM-TEILPAKKFYRAEEHHQQYLSKGGRF 184


>AT5G07460.1 | Symbols: PMSR2, ATMSRA2 | peptidemethionine sulfoxide
           reductase 2 | chr5:2360844-2361885 REVERSE LENGTH=218
          Length = 218

 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 5/144 (3%)

Query: 49  AVFALGSFWRSEAVFGCIPGVVRTTVGYAGGSKPHPEYRSLA----DHAESVQVEYDTRL 104
           A FA G FW  E  F  IPGV  T VGY  G   +P Y  +     +HAE V+V+YD + 
Sbjct: 54  AEFAAGCFWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVCTNTTNHAEVVRVQYDPKE 113

Query: 105 ISFRELIDIFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRMAAVSKEQEQTRSRSSI 164
            ++  L+D+FWS H+P  +  QG  +G QYRS I+    E+ ++A  S E+EQ +    I
Sbjct: 114 CTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPEQEKLARESLEKEQKKLEDKI 173

Query: 165 VTTQILQLGTFYPAEPEHQKFELK 188
           V T+IL    FY AE  HQ++ +K
Sbjct: 174 V-TEILPAKKFYKAEEYHQQYLVK 196


>AT4G25130.1 | Symbols: PMSR4 | peptide met sulfoxide reductase 4 |
           chr4:12898802-12899998 REVERSE LENGTH=258
          Length = 258

 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 9/162 (5%)

Query: 33  VAQPARDPPDQQRLQTAVFALGSFWRSEAVFGCIPGVVRTTVGYAGGSKPHPEYRSLA-- 90
           +AQ   D       Q A F  G FW  E  +  +PGV +T VGY+ G   +P Y  +   
Sbjct: 78  IAQGPDDDVPSSGQQFAQFGAGCFWGVELAYQRVPGVTKTEVGYSHGIVHNPSYEDVCTG 137

Query: 91  --DHAESVQVEYDTRLISFRELIDIFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRM 148
              H E V+V+YD +  SF  L+D+FW+ HDP  +  QG DVG QYRS I+    E+ R+
Sbjct: 138 TTGHNEVVRVQYDPKECSFESLLDVFWNRHDPTTLNRQGGDVGTQYRSGIYYYTDEQERI 197

Query: 149 A--AVSKEQEQTRSRSSIVTTQILQLGTFYPAEPEHQKFELK 188
           A  AV K+Q+    R   + T+IL    FY AE  HQ++  K
Sbjct: 198 AREAVEKQQKILNKR---IVTEILPATKFYRAENYHQQYLAK 236