Miyakogusa Predicted Gene

Lj4g3v1034350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1034350.1 tr|A7DX09|A7DX09_LOTJA Parvulin-type
peptidyl-prolyl cis/trans isomerase OS=Lotus japonicus GN=pin1
,100,0,PTHR10657,NULL; PPIC_PPIASE_2,Peptidyl-prolyl cis-trans
isomerase, PpiC-type; PPIC_PPIASE_1,Peptidyl,CUFF.48291.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18040.1 | Symbols: PIN1AT | peptidylprolyl cis/trans isomera...   204   1e-53
AT1G26550.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    57   4e-09

>AT2G18040.1 | Symbols: PIN1AT | peptidylprolyl cis/trans isomerase,
           NIMA-interacting 1 | chr2:7842346-7843537 FORWARD
           LENGTH=119
          Length = 119

 Score =  204 bits (519), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 95/113 (84%), Positives = 108/113 (95%)

Query: 9   EVRASHILIKHQGSRRKASWKDPEGRVIKNTTRESAVAQLSTLREDILSGKANFEDVASR 68
           +V+ASHILIKHQGSRRKASWKDPEG++I  TTRE+AV QL ++REDI+SGKANFE+VA+R
Sbjct: 6   QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGDISEIVDTDSGVHIIKRT 121
           +SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVGDIS+IVDTDSGVHIIKRT
Sbjct: 66  VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118


>AT1G26550.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr1:9171800-9172716 FORWARD
           LENGTH=142
          Length = 142

 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 34/59 (57%)

Query: 60  ANFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGDISEIVDTDSGVHII 118
           A F  +A+  S+C S K+GGDLG F RG+M  PF++  F   VG  S    +  G HII
Sbjct: 77  AEFAKIAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHII 135