Miyakogusa Predicted Gene

Lj4g3v1021110.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1021110.2 Non Chatacterized Hit- tr|E6ZZG9|E6ZZG9_SPORE
Putative uncharacterized protein OS=Sporisorium
reilia,37.72,4e-17,coiled-coil,NULL; DUF1640,Protein of unknown
function DUF1640; UNCHARACTERIZED,Coiled-coil domain-co,CUFF.48272.2
         (259 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16460.1 | Symbols:  | Protein of unknown function (DUF1640) ...   218   4e-57
AT2G16460.2 | Symbols:  | Protein of unknown function (DUF1640) ...   217   6e-57
AT3G51090.1 | Symbols:  | Protein of unknown function (DUF1640) ...   207   5e-54
AT2G35070.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    51   8e-07
AT2G35090.1 | Symbols:  | Protein of unknown function (DUF1640) ...    51   1e-06

>AT2G16460.1 | Symbols:  | Protein of unknown function (DUF1640) |
           chr2:7133704-7135483 REVERSE LENGTH=230
          Length = 230

 Score =  218 bits (554), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 107/131 (81%), Positives = 117/131 (89%)

Query: 129 RHISELVKSNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITGVLNDSLENVSQSLVS 188
           R  SEL K+NG+  FLVDTLALVR LE QGVPSKQAEAIT+AIT VLNDSLENVS+S VS
Sbjct: 39  RQFSELTKANGRRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEVLNDSLENVSESFVS 98

Query: 189 KGEMQKTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRYEMDKVTA 248
           K EMQK EMIQ+SNLSKFKSEV+SSQ HHF++LQ ETEKLR DIEKMRSELRYE+DKVTA
Sbjct: 99  KAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVLQRETEKLRGDIEKMRSELRYEIDKVTA 158

Query: 249 GQRLDMNLERG 259
           GQRLD+NLERG
Sbjct: 159 GQRLDLNLERG 169


>AT2G16460.2 | Symbols:  | Protein of unknown function (DUF1640) |
           chr2:7133808-7135483 REVERSE LENGTH=173
          Length = 173

 Score =  217 bits (553), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 107/131 (81%), Positives = 117/131 (89%)

Query: 129 RHISELVKSNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITGVLNDSLENVSQSLVS 188
           R  SEL K+NG+  FLVDTLALVR LE QGVPSKQAEAIT+AIT VLNDSLENVS+S VS
Sbjct: 39  RQFSELTKANGRRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEVLNDSLENVSESFVS 98

Query: 189 KGEMQKTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRYEMDKVTA 248
           K EMQK EMIQ+SNLSKFKSEV+SSQ HHF++LQ ETEKLR DIEKMRSELRYE+DKVTA
Sbjct: 99  KAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVLQRETEKLRGDIEKMRSELRYEIDKVTA 158

Query: 249 GQRLDMNLERG 259
           GQRLD+NLERG
Sbjct: 159 GQRLDLNLERG 169


>AT3G51090.1 | Symbols:  | Protein of unknown function (DUF1640) |
           chr3:18978192-18979853 REVERSE LENGTH=298
          Length = 298

 Score =  207 bits (527), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 102/132 (77%), Positives = 116/132 (87%)

Query: 128 TRHISELVKSNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITGVLNDSLENVSQSLV 187
            R IS+L+K+NGK LFLVDTLALVR LE QG+PSKQAEAIT AIT VLNDSL  VSQ +V
Sbjct: 106 ARFISQLIKTNGKRLFLVDTLALVRSLEAQGLPSKQAEAITGAITEVLNDSLGVVSQLVV 165

Query: 188 SKGEMQKTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRYEMDKVT 247
           SKGEMQK EM QESNLSKFKSE+ SS  HHFSLLQHE EKLRNDIE++RS++R+E+DKVT
Sbjct: 166 SKGEMQKAEMTQESNLSKFKSEINSSLDHHFSLLQHENEKLRNDIERIRSDIRHEIDKVT 225

Query: 248 AGQRLDMNLERG 259
           AGQRLD+NLE+G
Sbjct: 226 AGQRLDLNLEKG 237


>AT2G35070.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: pollen tube
           development, pollen development; LOCATED IN:
           mitochondrion; BEST Arabidopsis thaliana protein match
           is: Protein of unknown function (DUF1640)
           (TAIR:AT2G35090.1); Has 62 Blast hits to 62 proteins in
           11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr2:14783518-14784508 FORWARD
           LENGTH=158
          Length = 158

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 27/103 (26%)

Query: 137 SNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITGVLNDSLENVSQSLVSKGEMQKTE 196
           S+G H   VD L +V+ LE   VPS QAEA+T AIT                        
Sbjct: 23  SSGNH---VDKLGMVKALEAINVPSTQAEALTGAITSGF--------------------- 58

Query: 197 MIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSEL 239
              ES + K K+++  S+ +  + +  E  K+R DIEKMR+++
Sbjct: 59  ---ESVMGKVKADIAKSEEYKSTRVAEEFRKMRADIEKMRADI 98


>AT2G35090.1 | Symbols:  | Protein of unknown function (DUF1640) |
           chr2:14792187-14793030 FORWARD LENGTH=158
          Length = 158

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 20/108 (18%)

Query: 137 SNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITGVLNDSLENVSQSLVSKGEMQKTE 196
           S+G H   VD L +V+ LE   VPS QAEA+T AIT  L   +E V   +    E Q T 
Sbjct: 23  SSGNH---VDKLGMVKALEAINVPSTQAEALTGAITSGLESVVEKVKADIAKSEEYQSTS 79

Query: 197 MIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRYEMD 244
           + +E  + K ++++                K+R DI  M++E R + D
Sbjct: 80  VAEE--VRKMRADIN---------------KVRADIATMQAEKRCDHD 110