Miyakogusa Predicted Gene

Lj4g3v0985590.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0985590.2 tr|G7LDW4|G7LDW4_MEDTR Tm-1^GCR26 protein
OS=Medicago truncatula GN=MTR_8g076950 PE=4 SV=1,83.17,0,FAMILY NOT
NAMED,NULL; UPF0261,Uncharacterised protein family UPF0261;
TIM-br_sig_trns,TIM-barrel si,CUFF.48734.2
         (703 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66420.2 | Symbols:  | LOCATED IN: cellular_component unknown...   817   0.0  
AT5G66420.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Uncharacte...   743   0.0  

>AT5G66420.2 | Symbols:  | LOCATED IN: cellular_component unknown;
           EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
           growth stages; CONTAINS InterPro DOMAIN/s:
           Uncharacterised conserved protein UCP033271
           (InterPro:IPR008322), TIM-barrel signal transduction
           protein, predicted (InterPro:IPR009215); Has 1232 Blast
           hits to 1230 proteins in 311 species: Archae - 18;
           Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42;
           Viruses - 0; Other Eukaryotes - 128 (source: NCBI
           BLink). | chr5:26521893-26524986 REVERSE LENGTH=754
          Length = 754

 Score =  817 bits (2111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/702 (61%), Positives = 501/702 (71%), Gaps = 10/702 (1%)

Query: 9   TLRVLCIGTLDTKLDELRFLSDSLRSNLHRFTHHSSPNLQLVLVDVSTGPNAPPQQPSPN 68
           T RV C+GT DTKLDELRFL+ S+RSN+  F+ +SS  +++V+VDVS G +        +
Sbjct: 5   TYRVFCVGTADTKLDELRFLAGSVRSNIGAFSKNSSSKVEVVIVDVSAGADQKQIDNVAD 64

Query: 69  FTFVSRNDVXXXXXXXXX-----XXPEDRGEAVAVMSQALENFLNESSHD--IAXXXXXX 121
           F FV+R +V                P+DRGEAV VMS+ LENFL ++  D  +A      
Sbjct: 65  FAFVTREEVLSCYIGSNQEEKPVKLPDDRGEAVGVMSKCLENFLRQAFEDNSLAGAIGLG 124

Query: 122 XXXXXXXXXXXXXXXXXGIPKLIVSTVASGQTEPYVGTSDLVLFPSIVDVAGXXXXXXXX 181
                            GIPK+IVSTVASGQTEPYVGTSDLVL PS+VDV G        
Sbjct: 125 GSGGTSLISSAFRSLPIGIPKVIVSTVASGQTEPYVGTSDLVLIPSLVDVCGINSVSRVV 184

Query: 182 XXXXXXXXXGMVVGRVQSLKDLDSRGEDCKPTVGLTMFGVTTSCVNAVRDRLRDEGYESL 241
                    GMVVGR++  +   S    C  TVG+TMFGVTT CVNAV++ L  EGYE+L
Sbjct: 185 FSNAGASFAGMVVGRLELFRSSPSDNGKC--TVGITMFGVTTPCVNAVQEILTREGYETL 242

Query: 242 VFHATGVGGRAMEDLVRQGFIQGVFDITTTEVADHIVGGVMACDGSRFDAIIEKKIPLVL 301
           VFHATGVGGRAME LV++GFIQGV DITTTEVADH+VGGVMACD SRFD  IEK IPLVL
Sbjct: 243 VFHATGVGGRAMESLVKEGFIQGVMDITTTEVADHLVGGVMACDSSRFDITIEKGIPLVL 302

Query: 302 SVGALDMVNFGAKDTVPQEFQQRNIYEHNKQVSLMRTTADENRRFADFIAKKLNNSSSKI 361
           SVGALDMVNFG KDT+P  FQ R I+ HN+QVSL+RTTA+EN++FA FIA KLN S+SK+
Sbjct: 303 SVGALDMVNFGGKDTIPSHFQTRKIHVHNEQVSLIRTTAEENKKFARFIADKLNKSTSKV 362

Query: 362 RVCLPEKGISALDAPGKPFYDPEATGTLIHELQRLVQTDDNRKVKVYPHHINDLEFANAL 421
           RVC+PEKG+SALDAPGKPF DPEATG LI+ELQ L+QT+D+R+V +Y HHIND EFA AL
Sbjct: 363 RVCIPEKGLSALDAPGKPFCDPEATGALINELQGLIQTNDDRQVNIYSHHINDPEFAEAL 422

Query: 422 VDAFLEIDETTSKDSTHSPVASPESVVHFHEDYISNASSSGTIVYAPSDFPNARPETLEK 481
           V +FLEI   T      S   S +     H+D     S    I Y+P +FPNA+PETLE+
Sbjct: 423 VASFLEICPKTYAQIKPSETTSTKPSTGEHDDG-HVRSRLERIPYSPKEFPNAKPETLER 481

Query: 482 TQLILQQLKHQXXXXXXXXXXXXXXXXXXKFEEVGGVDLIVLYNSGRFRMAGRGSLAGLL 541
           TQ IL +L+ Q                  KFEE GG+DLIV+YNSGRFRMAGRGSLAGLL
Sbjct: 482 TQAILGRLRDQIEKGIPIIGGGAGTGISAKFEEAGGIDLIVIYNSGRFRMAGRGSLAGLL 541

Query: 542 PFADANAVVLDMANEXXXXXXXXXXXXXXCATDPFRRMEYFLKQVESTGFSGVQNFPTVG 601
           PFADANAVVL+MANE              CATDPFRRM+YFLKQ+ES GF GVQNFPTVG
Sbjct: 542 PFADANAVVLEMANEVLPVVKAVPVLAGVCATDPFRRMDYFLKQLESIGFVGVQNFPTVG 601

Query: 602 LFDGNFRQNLEETGMGYSLEVEMIRKAHNMGLLTTPYAFNQHEAIEMAKAGADIIVAHMG 661
           LFDGNFRQNLEETGMGY LEV+MI +AH MGLLTTPYAFN  E  EMAKAGADIIVAHMG
Sbjct: 602 LFDGNFRQNLEETGMGYGLEVKMISEAHKMGLLTTPYAFNPKEGEEMAKAGADIIVAHMG 661

Query: 662 LTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPNAIVLCHG 703
           LTT+G+IGAKTAVS+EESVVRVQAIADAA R NP+ IVLCHG
Sbjct: 662 LTTSGNIGAKTAVSVEESVVRVQAIADAARRFNPDIIVLCHG 703


>AT5G66420.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
           Uncharacterised conserved protein UCP033271
           (InterPro:IPR008322), TIM-barrel signal transduction
           protein, predicted (InterPro:IPR009215); Has 30201 Blast
           hits to 17322 proteins in 780 species: Archae - 12;
           Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
           5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:26521893-26524537 REVERSE LENGTH=655
          Length = 655

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/607 (64%), Positives = 444/607 (73%), Gaps = 5/607 (0%)

Query: 99  MSQALENFLNESSHD--IAXXXXXXXXXXXXXXXXXXXXXXXGIPKLIVSTVASGQTEPY 156
           MS+ LENFL ++  D  +A                       GIPK+IVSTVASGQTEPY
Sbjct: 1   MSKCLENFLRQAFEDNSLAGAIGLGGSGGTSLISSAFRSLPIGIPKVIVSTVASGQTEPY 60

Query: 157 VGTSDLVLFPSIVDVAGXXXXXXXXXXXXXXXXXGMVVGRVQSLKDLDSRGEDCKPTVGL 216
           VGTSDLVL PS+VDV G                 GMVVGR++  +   S    C  TVG+
Sbjct: 61  VGTSDLVLIPSLVDVCGINSVSRVVFSNAGASFAGMVVGRLELFRSSPSDNGKC--TVGI 118

Query: 217 TMFGVTTSCVNAVRDRLRDEGYESLVFHATGVGGRAMEDLVRQGFIQGVFDITTTEVADH 276
           TMFGVTT CVNAV++ L  EGYE+LVFHATGVGGRAME LV++GFIQGV DITTTEVADH
Sbjct: 119 TMFGVTTPCVNAVQEILTREGYETLVFHATGVGGRAMESLVKEGFIQGVMDITTTEVADH 178

Query: 277 IVGGVMACDGSRFDAIIEKKIPLVLSVGALDMVNFGAKDTVPQEFQQRNIYEHNKQVSLM 336
           +VGGVMACD SRFD  IEK IPLVLSVGALDMVNFG KDT+P  FQ R I+ HN+QVSL+
Sbjct: 179 LVGGVMACDSSRFDITIEKGIPLVLSVGALDMVNFGGKDTIPSHFQTRKIHVHNEQVSLI 238

Query: 337 RTTADENRRFADFIAKKLNNSSSKIRVCLPEKGISALDAPGKPFYDPEATGTLIHELQRL 396
           RTTA+EN++FA FIA KLN S+SK+RVC+PEKG+SALDAPGKPF DPEATG LI+ELQ L
Sbjct: 239 RTTAEENKKFARFIADKLNKSTSKVRVCIPEKGLSALDAPGKPFCDPEATGALINELQGL 298

Query: 397 VQTDDNRKVKVYPHHINDLEFANALVDAFLEIDETTSKDSTHSPVASPESVVHFHEDYIS 456
           +QT+D+R+V +Y HHIND EFA ALV +FLEI   T      S   S +     H+D   
Sbjct: 299 IQTNDDRQVNIYSHHINDPEFAEALVASFLEICPKTYAQIKPSETTSTKPSTGEHDDG-H 357

Query: 457 NASSSGTIVYAPSDFPNARPETLEKTQLILQQLKHQXXXXXXXXXXXXXXXXXXKFEEVG 516
             S    I Y+P +FPNA+PETLE+TQ IL +L+ Q                  KFEE G
Sbjct: 358 VRSRLERIPYSPKEFPNAKPETLERTQAILGRLRDQIEKGIPIIGGGAGTGISAKFEEAG 417

Query: 517 GVDLIVLYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEXXXXXXXXXXXXXXCATDPF 576
           G+DLIV+YNSGRFRMAGRGSLAGLLPFADANAVVL+MANE              CATDPF
Sbjct: 418 GIDLIVIYNSGRFRMAGRGSLAGLLPFADANAVVLEMANEVLPVVKAVPVLAGVCATDPF 477

Query: 577 RRMEYFLKQVESTGFSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIRKAHNMGLLTT 636
           RRM+YFLKQ+ES GF GVQNFPTVGLFDGNFRQNLEETGMGY LEV+MI +AH MGLLTT
Sbjct: 478 RRMDYFLKQLESIGFVGVQNFPTVGLFDGNFRQNLEETGMGYGLEVKMISEAHKMGLLTT 537

Query: 637 PYAFNQHEAIEMAKAGADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPN 696
           PYAFN  E  EMAKAGADIIVAHMGLTT+G+IGAKTAVS+EESVVRVQAIADAA R NP+
Sbjct: 538 PYAFNPKEGEEMAKAGADIIVAHMGLTTSGNIGAKTAVSVEESVVRVQAIADAARRFNPD 597

Query: 697 AIVLCHG 703
            IVLCHG
Sbjct: 598 IIVLCHG 604