Miyakogusa Predicted Gene

Lj4g3v0985590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0985590.1 tr|G7LDW3|G7LDW3_MEDTR Tm-1^GCR26 protein
OS=Medicago truncatula GN=MTR_8g076950 PE=4 SV=1,95.5,0,FAMILY NOT
NAMED,NULL; TIM-br_sig_trns,TIM-barrel signal transduction protein,
predicted; seg,NULL; ,CUFF.48734.1
         (223 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66420.2 | Symbols:  | LOCATED IN: cellular_component unknown...   348   2e-96
AT5G66420.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Uncharacte...   348   2e-96

>AT5G66420.2 | Symbols:  | LOCATED IN: cellular_component unknown;
           EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
           growth stages; CONTAINS InterPro DOMAIN/s:
           Uncharacterised conserved protein UCP033271
           (InterPro:IPR008322), TIM-barrel signal transduction
           protein, predicted (InterPro:IPR009215); Has 1232 Blast
           hits to 1230 proteins in 311 species: Archae - 18;
           Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42;
           Viruses - 0; Other Eukaryotes - 128 (source: NCBI
           BLink). | chr5:26521893-26524986 REVERSE LENGTH=754
          Length = 754

 Score =  348 bits (893), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 181/223 (81%), Positives = 195/223 (87%), Gaps = 1/223 (0%)

Query: 1   MAGRGSLAGLLPFADANAVVLDMANEXXXXXXXXXXXXXXCATDPFRRMEYFLKQVESTG 60
           MAGRGSLAGLLPFADANAVVL+MANE              CATDPFRRM+YFLKQ+ES G
Sbjct: 531 MAGRGSLAGLLPFADANAVVLEMANEVLPVVKAVPVLAGVCATDPFRRMDYFLKQLESIG 590

Query: 61  FSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIRKAHNMGLLTTPYAFNQHEAIEMAK 120
           F GVQNFPTVGLFDGNFRQNLEETGMGY LEV+MI +AH MGLLTTPYAFN  E  EMAK
Sbjct: 591 FVGVQNFPTVGLFDGNFRQNLEETGMGYGLEVKMISEAHKMGLLTTPYAFNPKEGEEMAK 650

Query: 121 AGADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPNAIVLCHGGPISGPE 180
           AGADIIVAHMGLTT+G+IGAKTAVS+EESVVRVQAIADAA R NP+ IVLCHGGPISGPE
Sbjct: 651 AGADIIVAHMGLTTSGNIGAKTAVSVEESVVRVQAIADAARRFNPDIIVLCHGGPISGPE 710

Query: 181 EAEFILKRTKG-VHGFYGASSMERLPVEQAITSTVKQYKSIFI 222
           EAEF+LKRT+G VHGFYGASSMERLPVEQAIT+TV++YKSI I
Sbjct: 711 EAEFVLKRTQGCVHGFYGASSMERLPVEQAITNTVQKYKSISI 753


>AT5G66420.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
           Uncharacterised conserved protein UCP033271
           (InterPro:IPR008322), TIM-barrel signal transduction
           protein, predicted (InterPro:IPR009215); Has 30201 Blast
           hits to 17322 proteins in 780 species: Archae - 12;
           Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
           5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:26521893-26524537 REVERSE LENGTH=655
          Length = 655

 Score =  348 bits (892), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 181/223 (81%), Positives = 195/223 (87%), Gaps = 1/223 (0%)

Query: 1   MAGRGSLAGLLPFADANAVVLDMANEXXXXXXXXXXXXXXCATDPFRRMEYFLKQVESTG 60
           MAGRGSLAGLLPFADANAVVL+MANE              CATDPFRRM+YFLKQ+ES G
Sbjct: 432 MAGRGSLAGLLPFADANAVVLEMANEVLPVVKAVPVLAGVCATDPFRRMDYFLKQLESIG 491

Query: 61  FSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIRKAHNMGLLTTPYAFNQHEAIEMAK 120
           F GVQNFPTVGLFDGNFRQNLEETGMGY LEV+MI +AH MGLLTTPYAFN  E  EMAK
Sbjct: 492 FVGVQNFPTVGLFDGNFRQNLEETGMGYGLEVKMISEAHKMGLLTTPYAFNPKEGEEMAK 551

Query: 121 AGADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPNAIVLCHGGPISGPE 180
           AGADIIVAHMGLTT+G+IGAKTAVS+EESVVRVQAIADAA R NP+ IVLCHGGPISGPE
Sbjct: 552 AGADIIVAHMGLTTSGNIGAKTAVSVEESVVRVQAIADAARRFNPDIIVLCHGGPISGPE 611

Query: 181 EAEFILKRTKG-VHGFYGASSMERLPVEQAITSTVKQYKSIFI 222
           EAEF+LKRT+G VHGFYGASSMERLPVEQAIT+TV++YKSI I
Sbjct: 612 EAEFVLKRTQGCVHGFYGASSMERLPVEQAITNTVQKYKSISI 654