Miyakogusa Predicted Gene

Lj4g3v0975580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0975580.1 Non Chatacterized Hit- tr|A2V887|A2V887_TOBAC
Putative uncharacterized protein RsRG3-11 (Fragment)
O,65.28,1e-18,seg,NULL; PALMITOYL PROTEIN THIOESTERASE-RELATED,NULL;
PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOS,CUFF.48249.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50920.2 | Symbols:  | Phosphatidic acid phosphatase (PAP2) f...   105   2e-23
AT3G50920.1 | Symbols:  | Phosphatidic acid phosphatase (PAP2) f...   105   3e-23
AT5G66450.1 | Symbols:  | Phosphatidic acid phosphatase (PAP2) f...   101   4e-22
AT5G66450.2 | Symbols:  | Phosphatidic acid phosphatase (PAP2) f...   101   5e-22

>AT3G50920.2 | Symbols:  | Phosphatidic acid phosphatase (PAP2)
           family protein | chr3:18922403-18923380 REVERSE
           LENGTH=228
          Length = 228

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 2/111 (1%)

Query: 64  FKGACAHRDEKSDGQVQVVEQEAFIDGSSEFHPKFLFHE-LESTLNQMSKWLVTAIFGVF 122
           F      R    + Q   +EQE+FI+ SSE     +    +E+ +N++SKW+V+ +FG  
Sbjct: 6   FSSRVGSRSNDGNEQFGALEQESFINNSSEIRKDLVTGGGIEAIVNRLSKWVVSVLFGSI 65

Query: 123 ILWRHDAEALWFAAGSFLNAMLSASLKQMLNQKRP-STLKSDPGMPSSHAQ 172
           IL RHD  ALW   GS  N+ LS  LK++LNQ+RP +TL+SDPGMPSSHAQ
Sbjct: 66  ILLRHDGAALWAVIGSISNSALSVVLKRILNQERPTTTLRSDPGMPSSHAQ 116


>AT3G50920.1 | Symbols:  | Phosphatidic acid phosphatase (PAP2)
           family protein | chr3:18922403-18923533 REVERSE
           LENGTH=279
          Length = 279

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 2/111 (1%)

Query: 64  FKGACAHRDEKSDGQVQVVEQEAFIDGSSEFHPKFLFHE-LESTLNQMSKWLVTAIFGVF 122
           F      R    + Q   +EQE+FI+ SSE     +    +E+ +N++SKW+V+ +FG  
Sbjct: 57  FSSRVGSRSNDGNEQFGALEQESFINNSSEIRKDLVTGGGIEAIVNRLSKWVVSVLFGSI 116

Query: 123 ILWRHDAEALWFAAGSFLNAMLSASLKQMLNQKRP-STLKSDPGMPSSHAQ 172
           IL RHD  ALW   GS  N+ LS  LK++LNQ+RP +TL+SDPGMPSSHAQ
Sbjct: 117 ILLRHDGAALWAVIGSISNSALSVVLKRILNQERPTTTLRSDPGMPSSHAQ 167


>AT5G66450.1 | Symbols:  | Phosphatidic acid phosphatase (PAP2)
           family protein | chr5:26534801-26535951 FORWARD
           LENGTH=286
          Length = 286

 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 78/120 (65%), Gaps = 9/120 (7%)

Query: 62  DGFKGAC--AHRDEKSDGQ--VQVVEQEAFI-DGSSEFHPKFLFHE---LESTLNQMSKW 113
            GFK        + + DG+   Q +EQEAFI + SSE   + +      +E+  N++SKW
Sbjct: 55  SGFKSMADLVKTNARRDGEDRFQALEQEAFISNSSSELQNELVSDAGDGIEAIANRLSKW 114

Query: 114 LVTAIFGVFILWRHDAEALWFAAGSFLNAMLSASLKQMLNQKRP-STLKSDPGMPSSHAQ 172
           +V A+FG  +L RHD  ALW   GS  N++LS +LK++LNQ+RP +TL+SDPGMPSSHAQ
Sbjct: 115 IVAALFGSVLLLRHDGAALWAVIGSVSNSVLSVALKRILNQERPVATLRSDPGMPSSHAQ 174


>AT5G66450.2 | Symbols:  | Phosphatidic acid phosphatase (PAP2)
           family protein | chr5:26534978-26535951 FORWARD
           LENGTH=227
          Length = 227

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/109 (49%), Positives = 75/109 (68%), Gaps = 7/109 (6%)

Query: 69  AHRDEKSDGQVQVVEQEAFI-DGSSEFHPKFLFHE---LESTLNQMSKWLVTAIFGVFIL 124
           A RD   + + Q +EQEAFI + SSE   + +      +E+  N++SKW+V A+FG  +L
Sbjct: 9   ARRD--GEDRFQALEQEAFISNSSSELQNELVSDAGDGIEAIANRLSKWIVAALFGSVLL 66

Query: 125 WRHDAEALWFAAGSFLNAMLSASLKQMLNQKRP-STLKSDPGMPSSHAQ 172
            RHD  ALW   GS  N++LS +LK++LNQ+RP +TL+SDPGMPSSHAQ
Sbjct: 67  LRHDGAALWAVIGSVSNSVLSVALKRILNQERPVATLRSDPGMPSSHAQ 115