Miyakogusa Predicted Gene

Lj4g3v0973380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0973380.1 tr|Q0PJF9|Q0PJF9_SOYBN MYB transcription factor
MYB164 (Fragment) OS=Glycine max GN=MYB164 PE=2
SV=1,65.15,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
SANT,SANT domain; SANT  SWI3, ADA2, N-CoR and TFIII,gene.g53616.t1.1
         (151 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39250.1 | Symbols: ATRL1, RSM2, RL1 | RAD-like 1 | chr4:1827...   100   5e-22
AT1G75250.1 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:2824...    97   3e-21
AT1G75250.2 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:2824...    96   7e-21
AT1G19510.1 | Symbols: ATRL5, RSM4, RL5 | RAD-like 5 | chr1:6756...    93   7e-20
AT2G21650.1 | Symbols: MEE3, ATRL2, RSM1 | Homeodomain-like supe...    87   3e-18
AT2G18328.1 | Symbols: ATRL4, RL4 | RAD-like 4 | chr2:7964478-79...    80   6e-16
AT5G58900.1 | Symbols:  | Homeodomain-like transcriptional regul...    78   3e-15
AT2G38090.1 | Symbols:  | Duplicated homeodomain-like superfamil...    77   5e-15
AT5G05790.1 | Symbols:  | Duplicated homeodomain-like superfamil...    76   9e-15
AT3G11280.2 | Symbols:  | Duplicated homeodomain-like superfamil...    71   3e-13
AT3G11280.1 | Symbols:  | Duplicated homeodomain-like superfamil...    71   3e-13
AT5G08520.1 | Symbols:  | Duplicated homeodomain-like superfamil...    68   3e-12
AT4G36570.1 | Symbols: ATRL3, RL3 | RAD-like 3 | chr4:17254660-1...    67   7e-12
AT5G04760.1 | Symbols:  | Duplicated homeodomain-like superfamil...    66   9e-12
AT1G49010.1 | Symbols:  | Duplicated homeodomain-like superfamil...    66   1e-11
AT5G23650.1 | Symbols:  | Homeodomain-like transcriptional regul...    62   1e-10
AT5G01200.1 | Symbols:  | Duplicated homeodomain-like superfamil...    59   2e-09
AT3G10595.1 | Symbols:  | Duplicated homeodomain-like superfamil...    50   5e-07

>AT4G39250.1 | Symbols: ATRL1, RSM2, RL1 | RAD-like 1 |
           chr4:18271457-18271857 REVERSE LENGTH=100
          Length = 100

 Score =  100 bits (248), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 55/68 (80%), Gaps = 1/68 (1%)

Query: 84  WTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQVPF 142
           WT +QNK FEQALA YD++TP+RWQNVA +V G++ EEVKRHYE+L +D+  IE+G VPF
Sbjct: 14  WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73

Query: 143 PRYRTNSN 150
           P YRT+  
Sbjct: 74  PNYRTSGG 81


>AT1G75250.1 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 |
           chr1:28245073-28245453 REVERSE LENGTH=126
          Length = 126

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)

Query: 82  SSWTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQV 140
           S WT  QNKMFE+ALA+YD++TPDRW NVA  V G++VEEVKRHY+IL ED+  IE G+V
Sbjct: 10  SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 141 PFPRYRT 147
           P P Y+T
Sbjct: 70  PLPNYKT 76


>AT1G75250.2 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 |
           chr1:28244463-28245453 REVERSE LENGTH=97
          Length = 97

 Score = 96.3 bits (238), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)

Query: 82  SSWTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQV 140
           S WT  QNKMFE+ALA+YD++TPDRW NVA  V G++VEEVKRHY+IL ED+  IE G+V
Sbjct: 10  SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 141 PFPRYRT 147
           P P Y+T
Sbjct: 70  PLPNYKT 76


>AT1G19510.1 | Symbols: ATRL5, RSM4, RL5 | RAD-like 5 |
           chr1:6756483-6757290 REVERSE LENGTH=100
          Length = 100

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 51/62 (82%), Gaps = 1/62 (1%)

Query: 87  RQNKMFEQALALYDRETPDRWQNVANIVG-RSVEEVKRHYEILKEDVQRIEHGQVPFPRY 145
           +QNKMFE+ALA+YD++TPDRWQNVA  VG +S EEVKRHY+IL ED+  IE   VP P+Y
Sbjct: 15  KQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKY 74

Query: 146 RT 147
           +T
Sbjct: 75  KT 76


>AT2G21650.1 | Symbols: MEE3, ATRL2, RSM1 | Homeodomain-like
           superfamily protein | chr2:9259654-9260419 FORWARD
           LENGTH=101
          Length = 101

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 4/71 (5%)

Query: 84  WTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQVPF 142
           WT +QNK FE+ALA+YD++TPDRW NVA  V G++ EE KR Y++L  D++ IE+G VPF
Sbjct: 14  WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73

Query: 143 PRYRT---NSN 150
           P Y+T   NSN
Sbjct: 74  PDYKTTTGNSN 84


>AT2G18328.1 | Symbols: ATRL4, RL4 | RAD-like 4 |
           chr2:7964478-7964711 FORWARD LENGTH=77
          Length = 77

 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 2/65 (3%)

Query: 87  RQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQVPFPRY 145
           R++K FE ALA +D++TPDRWQ +A  V G+S EEVKRHYE+L  DV  IE G+ P PRY
Sbjct: 14  REDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRY 73

Query: 146 RTNSN 150
           R N+N
Sbjct: 74  R-NTN 77


>AT5G58900.1 | Symbols:  | Homeodomain-like transcriptional
           regulator | chr5:23783275-23784667 REVERSE LENGTH=288
          Length = 288

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 81  GSSWTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQ 139
           G++WT  +NK FE ALA+YD  TPDRWQ VA ++ G++V +V R Y  L+ DV  IE G 
Sbjct: 31  GATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGL 90

Query: 140 VPFPRYRT 147
           +P P Y T
Sbjct: 91  IPVPGYIT 98


>AT2G38090.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr2:15945278-15946775 FORWARD LENGTH=298
          Length = 298

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 81  GSSWTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQ 139
           G+ WT  +NK FE ALA YD++TPDRW  VA ++ G++V +V + Y  L+EDV  IE G 
Sbjct: 26  GTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAGL 85

Query: 140 VPFPRYRTNS 149
           +P P Y ++S
Sbjct: 86  IPIPGYASDS 95


>AT5G05790.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:1740724-1741671 REVERSE LENGTH=277
          Length = 277

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 5/90 (5%)

Query: 63  PILSSSLTQIIIFLCNEM----GSSWTPRQNKMFEQALALYDRETPDRWQNVANIV-GRS 117
           P+LS   T    F+  EM     SSWT  +NK FE+ALA+Y  +TPDRW  VA ++ G++
Sbjct: 6   PLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKT 65

Query: 118 VEEVKRHYEILKEDVQRIEHGQVPFPRYRT 147
           + +V R Y  L+ED+  IE G VP P YR+
Sbjct: 66  ISDVMRQYSKLEEDLFDIEAGLVPIPGYRS 95


>AT3G11280.2 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3533477-3534393 REVERSE LENGTH=263
          Length = 263

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 1/68 (1%)

Query: 84  WTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQVPF 142
           WT  +NKMFE+ALA+Y  ++PDRW  VA+++ G++V +V + Y  L+EDV  IE G+VP 
Sbjct: 33  WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92

Query: 143 PRYRTNSN 150
           P Y   S+
Sbjct: 93  PGYPAASS 100


>AT3G11280.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3533477-3534393 REVERSE LENGTH=263
          Length = 263

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 1/68 (1%)

Query: 84  WTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQVPF 142
           WT  +NKMFE+ALA+Y  ++PDRW  VA+++ G++V +V + Y  L+EDV  IE G+VP 
Sbjct: 33  WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92

Query: 143 PRYRTNSN 150
           P Y   S+
Sbjct: 93  PGYPAASS 100


>AT5G08520.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:2755470-2757741 REVERSE LENGTH=298
          Length = 298

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)

Query: 81  GSSWTPRQNKMFEQALALYDRETPDRWQNVA-NIVGRSVEEVKRHYEILKEDVQRIEHGQ 139
           GS W+   +  FE+ALA    E+ +RW+ +A ++ G+SVE++K HYE+L EDV RIE G 
Sbjct: 9   GSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGC 68

Query: 140 VPFPRYRTNSNS 151
           VP P Y +   S
Sbjct: 69  VPLPAYGSPEGS 80


>AT4G36570.1 | Symbols: ATRL3, RL3 | RAD-like 3 |
           chr4:17254660-17254836 FORWARD LENGTH=58
          Length = 58

 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query: 84  WTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYE 126
           WT ++NK+FE+ALA YD++TPDRW NVA  V G+S EEV+RHYE
Sbjct: 12  WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYE 55


>AT5G04760.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:1373752-1374529 REVERSE LENGTH=215
          Length = 215

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 43/64 (67%)

Query: 82  SSWTPRQNKMFEQALALYDRETPDRWQNVANIVGRSVEEVKRHYEILKEDVQRIEHGQVP 141
           S WT  ++KMFEQAL L+   +P+RW+ +A+ + +S  EV+ HYE+L  DV  I+ G+V 
Sbjct: 4   SQWTRSEDKMFEQALVLFPEGSPNRWERIADQLHKSAGEVREHYEVLVHDVFEIDSGRVD 63

Query: 142 FPRY 145
            P Y
Sbjct: 64  VPDY 67


>AT1G49010.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr1:18132714-18133778 FORWARD LENGTH=314
          Length = 314

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 50/68 (73%), Gaps = 4/68 (5%)

Query: 82  SSWTPRQNKMFEQALALYDRE---TPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEH 137
           ++W+  + K FE A+AL+  E   T D+W  ++++V  +++EEVK+HY+IL EDV+ IE+
Sbjct: 6   ATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIEN 65

Query: 138 GQVPFPRY 145
           GQVP PRY
Sbjct: 66  GQVPLPRY 73


>AT5G23650.1 | Symbols:  | Homeodomain-like transcriptional
           regulator | chr5:7969812-7971019 FORWARD LENGTH=337
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 80  MGSSWTPRQNKMFEQALALYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHG 138
           +GSSW+   +  FE+ALA+Y+ +T  RW+ +A +V G+++E+V  HY IL  DV  IE G
Sbjct: 9   VGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLIESG 68

Query: 139 QVPFPRY 145
            V  P Y
Sbjct: 69  CVRLPDY 75


>AT5G01200.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:77116-78294 FORWARD LENGTH=267
          Length = 267

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 2/72 (2%)

Query: 82  SSWTPRQNKMFEQALA-LYDRETPDRWQNVANIV-GRSVEEVKRHYEILKEDVQRIEHGQ 139
           ++WT  +NK FE+ALA L D++  + W  +A+++ G++V +V + Y+ L++DV  IE G 
Sbjct: 28  ATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAGL 87

Query: 140 VPFPRYRTNSNS 151
           +P P Y  +++S
Sbjct: 88  IPIPGYGGDASS 99


>AT3G10595.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3311905-3312815 REVERSE LENGTH=183
          Length = 183

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 39/62 (62%)

Query: 82  SSWTPRQNKMFEQALALYDRETPDRWQNVANIVGRSVEEVKRHYEILKEDVQRIEHGQVP 141
           +SWT  +N+MF+ AL ++      R+++VA  V RSV++VK HY+ L  D+  +   +V 
Sbjct: 4   NSWTTEENEMFKDALVMFTAFLLTRFESVAEYVDRSVDDVKEHYKELVNDLLEMGSSRVA 63

Query: 142 FP 143
           FP
Sbjct: 64  FP 65