Miyakogusa Predicted Gene

Lj4g3v0913490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0913490.1 tr|E9BZ66|E9BZ66_CAPO3 Vacuolar proton pump
subunit H OS=Capsaspora owczarzaki (strain ATCC 30864)
G,33.96,0.00000000003,ARM repeat,Armadillo-type fold; V-TYPE PROTON
ATPASE SUBUNIT H,NULL; V-TYPE PROTON ATPASE SUBUNIT
H,,NODE_40529_length_590_cov_184.867798.path2.1
         (129 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42050.1 | Symbols:  | vacuolar ATP synthase subunit H family...   183   2e-47

>AT3G42050.1 | Symbols:  | vacuolar ATP synthase subunit H family
           protein | chr3:14228846-14232228 REVERSE LENGTH=441
          Length = 441

 Score =  183 bits (465), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 85/115 (73%), Positives = 99/115 (86%)

Query: 1   MDQAELTVDQVLSRDIPWETYMSTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRV 60
           MDQAEL+++QVL RDIPWETYM+TKL+S   LQLLRRYD + ES RAQLLD+DGPAYV +
Sbjct: 1   MDQAELSIEQVLKRDIPWETYMNTKLVSAKGLQLLRRYDKKPESARAQLLDEDGPAYVHL 60

Query: 61  FIHVLRDIFKEDTVEYVLALIDEMLTANPKRARLFHDSALADEDTYEPFLNCFGK 115
           F+ +LRDIFKE+TVEYVLALI EML+ANP RARLFHD +LA+EDTYEPFL    K
Sbjct: 61  FVSILRDIFKEETVEYVLALIYEMLSANPTRARLFHDESLANEDTYEPFLRLLWK 115