Miyakogusa Predicted Gene

Lj4g3v0866420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0866420.1 Non Chatacterized Hit- tr|K4BCH0|K4BCH0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,66.67,3e-16,
,CUFF.48122.1
         (63 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23520.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    87   3e-18
AT4G37100.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    79   7e-16
AT5G66950.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    76   4e-15
AT5G51920.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    54   2e-08
AT4G22980.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    51   2e-07

>AT2G23520.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr2:10014256-10016943 REVERSE LENGTH=895
          Length = 895

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/58 (74%), Positives = 45/58 (77%), Gaps = 2/58 (3%)

Query: 2   ENGRRNGKGSFVRLEVVTASLGFLTNFEGVYKLWAFVAKFLNPAFIREGGGGLPTVQE 59
           E G+R GK  FVR EVVTASL FL+NFE VYKLWAFVAKFLNP F RE  G LPTV E
Sbjct: 832 EAGKRGGKNGFVRFEVVTASLSFLSNFEDVYKLWAFVAKFLNPGFSRE--GSLPTVIE 887


>AT4G37100.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr4:17479173-17481863 REVERSE LENGTH=896
          Length = 896

 Score = 78.6 bits (192), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/50 (76%), Positives = 39/50 (78%), Gaps = 2/50 (4%)

Query: 8   GKGSFVRLEVVTASLGFLTNFEGVYKLWAFVAKFLNPAFIREGGGGLPTV 57
           GK  F+R EVVTASL FLTNFE VYKLW FVAKFLNP F RE  G LPTV
Sbjct: 837 GKNGFIRFEVVTASLSFLTNFEDVYKLWVFVAKFLNPGFSRE--GSLPTV 884


>AT5G66950.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr5:26733333-26735945 FORWARD LENGTH=870
          Length = 870

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 5/60 (8%)

Query: 4   GRRNGKGSFVRLEVVTASLGFLTNFEGVYKLWAFVAKFLNPAFIREGGGGLPTVQEGSET 63
           GR NG   F+R+EVVTASLGFLTNFE VY+LW FVAKFL+P F ++  G LPTV E  ++
Sbjct: 813 GRNNG---FIRVEVVTASLGFLTNFEDVYRLWNFVAKFLSPGFAKQ--GTLPTVIEEDDS 867


>AT5G51920.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr5:21097202-21098914 REVERSE LENGTH=570
          Length = 570

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 31/43 (72%)

Query: 5   RRNGKGSFVRLEVVTASLGFLTNFEGVYKLWAFVAKFLNPAFI 47
           +RN      R+ V+TA+LGFL NFE VYKLW FVA+FL+  F+
Sbjct: 508 KRNRDVDEPRISVLTAALGFLANFEDVYKLWIFVARFLDSEFV 550


>AT4G22980.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast; EXPRESSED IN: 13 plant structures;
           EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
           thaliana protein match is: Pyridoxal phosphate
           (PLP)-dependent transferases superfamily protein
           (TAIR:AT5G51920.1); Has 520 Blast hits to 468 proteins
           in 130 species: Archae - 5; Bacteria - 23; Metazoa - 99;
           Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes
           - 31 (source: NCBI BLink). | chr4:12043974-12045653
           REVERSE LENGTH=559
          Length = 559

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 3   NGRRNGKGSFVRLEVVTASLG-FLTNFEGVYKLWAFVAKFLNPAFIRE 49
           N RR+ +   +RL VVT  LG F+TNFE V+K+W FV++FL+  F+ +
Sbjct: 500 NKRRSDEAVSLRLSVVTVRLGGFMTNFEDVFKVWEFVSRFLDADFVEK 547