Miyakogusa Predicted Gene

Lj4g3v0853330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0853330.1 Non Chatacterized Hit- tr|A3BG41|A3BG41_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,41.67,3e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; WINS1, 2
PROTEIN,Protein Lines,CUFF.48183.1
         (663 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50430.1 | Symbols:  | unknown protein; Has 54 Blast hits to ...   346   3e-95

>AT3G50430.1 | Symbols:  | unknown protein; Has 54 Blast hits to 54
           proteins in 22 species: Archae - 0; Bacteria - 0;
           Metazoa - 29; Fungi - 0; Plants - 24; Viruses - 0; Other
           Eukaryotes - 1 (source: NCBI BLink). |
           chr3:18713718-18716759 FORWARD LENGTH=642
          Length = 642

 Score =  346 bits (888), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 235/674 (34%), Positives = 346/674 (51%), Gaps = 84/674 (12%)

Query: 13  LVDESLRPSTKPQACVSITREKENEILIASSEVVNKIQ-----------LRVREFDSVPN 61
           L+D  +R   + +     T+E E ++L++ S+V+ +IQ           +  RE ++V +
Sbjct: 13  LIDLCVRQFPEREEVTLPTKETEKDLLLSLSQVLREIQSWRSEISCDKAVESRE-ETVVD 71

Query: 62  KDESCSS--EKHCSVHQCLPKIITEMVILLSVKSEFVQHVTVKALVLTSQFVFTTGNNWN 119
            DES  +        + CL +++ ++V LL +++  V+H+    LV  S  +  +G+ W+
Sbjct: 72  HDESADALYGPDSIEYLCLERLVADLVCLLGMENVHVKHLAGNILVEVSGCLVESGSQWD 131

Query: 120 EFINFLCCSWEMVLARILSSSAESSDFDF-----------LMQCGLTNCDWSTVTGITQA 168
           EFI  LC    + +       A  S+  F           +++C L   +WSTV+ I + 
Sbjct: 132 EFIRLLCECLRLAVIYSFPIPAVGSETGFGSLDQCFFGSDVLKCKLEKANWSTVSDIFRV 191

Query: 169 MRVICKHLKEDYDDEVVKVFYDSVDSCLLKMPWDLLDEYWSCDIGSMERSSSMNQLNLKD 228
           +R I K L ++ ++E+  V+ +SV+S L K+PW  LD  +S   GS ER       N + 
Sbjct: 192 LRNILKRLSQEDNEEIFDVYLESVNSTLAKVPWCRLDTIFSHQHGSGER-------NFQG 244

Query: 229 VSG-MEPRIKFLGTLLQLLCSLVDRDDFVETGCDSADEHPLFITI---MNLIPRLVKWSL 284
            SG  E    FLG+ +Q LCS+V +   VE   DS D  P ++ +   + LIP L++W  
Sbjct: 245 QSGNSEEATVFLGSFVQFLCSMVQQVHVVE---DSDDFEPSYLILQKTIKLIPDLLRWCQ 301

Query: 285 SKQEDGAETCIIHYLKHKSLILMIRLGSISCVNCLVHLSWFELLHNYFQELLGEPLTQYQ 344
            K +  + +C+  YL HK L+LMIRL   S + C + LSW + L    Q  L   LT+++
Sbjct: 302 PKLKSQSGSCMSRYLGHKLLVLMIRLTDKSKIKCTILLSWLQYLQRDSQGFLQHTLTKFK 361

Query: 345 SDQGDVLEGSPFLLSLSNGQACGMHFSHLQRQAIFLLLACSFSLISQRGLNADNCNRSTM 404
             Q + LEGSPF +SLS+ +   MH +HLQR ++FL L CSF+LI     N   C     
Sbjct: 362 PVQDNCLEGSPFFVSLSDREVNEMHSNHLQRLSVFLFLRCSFTLIYSSRHNDKLC----- 416

Query: 405 CSRFTTSPDSELDDFCRKKGLLELYKWIQGHLPTEISIQHGKYMEICMNFMSSXXXXXXX 464
                     E D  CRKKG+ E++KWI+  +P  +   H  Y +  + F +S       
Sbjct: 417 ----------EFD--CRKKGMAEMFKWIERQIPGNMFSDHRIYSKKNVEFSASFVRLFMH 464

Query: 465 XXXXXXXXXXXXXXXXXXXXXETERKDAAHLDVKKDFSFDLSDIFNPVRLFHLFLSEIHY 524
                                    +  +  D ++   F LS +FNPVRLF +FLSE+HY
Sbjct: 465 EDDLLFKVLLQLLSVPLHRQELPNVEGGSLEDEEQITLFRLSTLFNPVRLFCIFLSELHY 524

Query: 525 DHQVLLDYLISKDIGICCAKYLLRCMNLICNSWKLFVEFPFSEEFLYQSSCKRRKVPGDG 584
           DHQVLLDYLISKDIG  CA+YLLRC+  +C+SW LFVEFPF E      S KRRKV    
Sbjct: 525 DHQVLLDYLISKDIGASCAEYLLRCLRAVCDSWTLFVEFPF-EGSTDAPSPKRRKV---- 579

Query: 585 QQFLADGMPSSVDKNESIILHMKNSTEEGEYGFKHYDIKPFNKASECLLSLNNSIVNLHQ 644
                  +P + +  ++  LH                 + F  A +CLLSL NS+V LHQ
Sbjct: 580 -------LPETSEVEQNWRLHA----------------QAFEDAKDCLLSLQNSVVKLHQ 616

Query: 645 KNLFPYNPEALLKR 658
           K LFPYNPEALL+R
Sbjct: 617 KKLFPYNPEALLRR 630