Miyakogusa Predicted Gene

Lj4g3v0843260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0843260.1 tr|Q54J54|Q54J54_DICDI DUF1649 family protein
OS=Dictyostelium discoideum GN=DDB_0187874 PE=4
SV=1,30,2e-18,DUF1649,Autophagy-related protein 1010; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,Autophagy-related ,CUFF.48102.1
         (218 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66930.2 | Symbols:  | unknown protein; CONTAINS InterPro DOM...   317   3e-87
AT5G66930.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   296   9e-81
AT5G66930.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...   208   2e-54

>AT5G66930.2 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1649
           (InterPro:IPR012445); Has 251 Blast hits to 251 proteins
           in 113 species: Archae - 0; Bacteria - 0; Metazoa - 91;
           Fungi - 85; Plants - 58; Viruses - 0; Other Eukaryotes -
           17 (source: NCBI BLink). | chr5:26725997-26727549
           FORWARD LENGTH=215
          Length = 215

 Score =  317 bits (813), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/219 (71%), Positives = 179/219 (81%), Gaps = 5/219 (2%)

Query: 1   MNCEVCQLKELEVEHFEIREILRCILHTVVFHRALGLVRPKDVDMELFDVTYVQCGXXXX 60
           MNCEVCQLKELEVE FEIRE+LRCILHT+VFHRALGL+RPKD+D+ELF++TYVQCG    
Sbjct: 1   MNCEVCQLKELEVESFEIREVLRCILHTIVFHRALGLIRPKDIDLELFEITYVQCGEIEV 60

Query: 61  XXXXXXXXXQFICWVEKHPNKKSQICLSFYEVKNKQVSWFSNKIERLYWEQWYINLNVAQ 120
                    QFI W+EKHPNKKSQICLSFYEVK+KQ SWF+ KIERLYWEQWYINLNV Q
Sbjct: 61  EKKIDEKIEQFINWIEKHPNKKSQICLSFYEVKSKQPSWFT-KIERLYWEQWYINLNVLQ 119

Query: 121 HQKAHSSKSHLSKVV-DPGEGALEDRNARSATLEASLREVLFQIIKFVNEKKDHVPPIPN 179
             K    KSH SK+V DPGE + E+R++R   LE SL+EVLFQIIKFVNEKKDHVPPI +
Sbjct: 120 PTKPPVGKSHHSKLVMDPGEAS-EERSSRRTLLEQSLQEVLFQIIKFVNEKKDHVPPIND 178

Query: 180 LEGAISFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS 218
             G I +P+EITIPSSSDSAFGMDM KR+L +GHP+ML 
Sbjct: 179 --GVIYYPFEITIPSSSDSAFGMDMFKRILHSGHPSMLG 215


>AT5G66930.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 15 growth stages; CONTAINS
           InterPro DOMAIN/s: Protein of unknown function DUF1649
           (InterPro:IPR012445); Has 247 Blast hits to 247 proteins
           in 111 species: Archae - 0; Bacteria - 0; Metazoa - 89;
           Fungi - 83; Plants - 58; Viruses - 0; Other Eukaryotes -
           17 (source: NCBI BLink). | chr5:26725839-26727549
           FORWARD LENGTH=251
          Length = 251

 Score =  296 bits (757), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 147/208 (70%), Positives = 168/208 (80%), Gaps = 5/208 (2%)

Query: 12  EVEHFEIREILRCILHTVVFHRALGLVRPKDVDMELFDVTYVQCGXXXXXXXXXXXXXQF 71
           EVE FEIRE+LRCILHT+VFHRALGL+RPKD+D+ELF++TYVQCG             QF
Sbjct: 48  EVESFEIREVLRCILHTIVFHRALGLIRPKDIDLELFEITYVQCGEIEVEKKIDEKIEQF 107

Query: 72  ICWVEKHPNKKSQICLSFYEVKNKQVSWFSNKIERLYWEQWYINLNVAQHQKAHSSKSHL 131
           I W+EKHPNKKSQICLSFYEVK+KQ SWF+ KIERLYWEQWYINLNV Q  K    KSH 
Sbjct: 108 INWIEKHPNKKSQICLSFYEVKSKQPSWFT-KIERLYWEQWYINLNVLQPTKPPVGKSHH 166

Query: 132 SKVV-DPGEGALEDRNARSATLEASLREVLFQIIKFVNEKKDHVPPIPNLEGAISFPYEI 190
           SK+V DPGE A E+R++R   LE SL+EVLFQIIKFVNEKKDHVPPI +  G I +P+EI
Sbjct: 167 SKLVMDPGE-ASEERSSRRTLLEQSLQEVLFQIIKFVNEKKDHVPPIND--GVIYYPFEI 223

Query: 191 TIPSSSDSAFGMDMIKRMLQTGHPTMLS 218
           TIPSSSDSAFGMDM KR+L +GHP+ML 
Sbjct: 224 TIPSSSDSAFGMDMFKRILHSGHPSMLG 251


>AT5G66930.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1649
           (InterPro:IPR012445); Has 236 Blast hits to 236 proteins
           in 105 species: Archae - 0; Bacteria - 0; Metazoa - 93;
           Fungi - 70; Plants - 56; Viruses - 0; Other Eukaryotes -
           17 (source: NCBI BLink). | chr5:26725997-26727127
           FORWARD LENGTH=157
          Length = 157

 Score =  208 bits (530), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/139 (73%), Positives = 113/139 (81%), Gaps = 2/139 (1%)

Query: 1   MNCEVCQLKELEVEHFEIREILRCILHTVVFHRALGLVRPKDVDMELFDVTYVQCGXXXX 60
           MNCEVCQLKELEVE FEIRE+LRCILHT+VFHRALGL+RPKD+D+ELF++TYVQCG    
Sbjct: 1   MNCEVCQLKELEVESFEIREVLRCILHTIVFHRALGLIRPKDIDLELFEITYVQCGEIEV 60

Query: 61  XXXXXXXXXQFICWVEKHPNKKSQICLSFYEVKNKQVSWFSNKIERLYWEQWYINLNVAQ 120
                    QFI W+EKHPNKKSQICLSFYEVK+KQ SWF+ KIERLYWEQWYINLNV Q
Sbjct: 61  EKKIDEKIEQFINWIEKHPNKKSQICLSFYEVKSKQPSWFT-KIERLYWEQWYINLNVLQ 119

Query: 121 HQKAHSSKSHLSKVV-DPG 138
             K    KSH SK+V DPG
Sbjct: 120 PTKPPVGKSHHSKLVMDPG 138