Miyakogusa Predicted Gene

Lj4g3v0818970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0818970.1 Non Chatacterized Hit- tr|I1K265|I1K265_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.372
PE=4,83.21,0,UPF0034,tRNA-dihydrouridine synthase, conserved site;
FMN-linked oxidoreductases,NULL; no descriptio,CUFF.48089.1
         (414 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67220.1 | Symbols:  | FMN-linked oxidoreductases superfamily...   590   e-169
AT3G49640.1 | Symbols:  | Aldolase-type TIM barrel family protei...   119   3e-27
AT3G49640.2 | Symbols:  | Aldolase-type TIM barrel family protei...   106   3e-23
AT4G38890.1 | Symbols:  | FMN-linked oxidoreductases superfamily...    72   6e-13
AT3G63510.1 | Symbols:  | FMN-linked oxidoreductases superfamily...    64   2e-10

>AT5G67220.1 | Symbols:  | FMN-linked oxidoreductases superfamily
           protein | chr5:26820276-26821926 REVERSE LENGTH=423
          Length = 423

 Score =  590 bits (1521), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 288/398 (72%), Positives = 327/398 (82%), Gaps = 21/398 (5%)

Query: 30  MAQTP-PSPDPNS-------PQQTDN------DDHQQPPFSPPRNLAGETQVERAWAHWT 75
           M Q P P PDP+         +Q D       D       SP R L+ +T+VERAWAHW 
Sbjct: 24  MTQNPDPKPDPSQVLDDILCSEQRDGQIEETVDTAPASLGSPSRVLSIDTRVERAWAHWK 83

Query: 76  KLGRPKFLVAPMVDNSELPFRMLCRKYGAEGAYTPMLHSRIFTETEKYRKEEFTTCKEDR 135
           KLGRPK++VAPMVDNSELPFR+LC+KYGA+ AYTPMLHSRIFTETEKYR +EFTTCKEDR
Sbjct: 84  KLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQEFTTCKEDR 143

Query: 136 PLFVQFCANDPDVLLEAARKVEPYCDYVDINLGCPQRIAKRGYYGAFLMDNLPLVKSLVE 195
           PLFVQFCANDPD LLEAA++VEPYCDYVDINLGCPQRIA+RG YGAFLMDNLPLVKSLVE
Sbjct: 144 PLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVE 203

Query: 196 NLALNLQVPVSCKIRLFPNLEDTLKYARMLEEAGCFLLAVHGRTRDEKDGKKFRADWKAI 255
            LA NL VPVSCKIR+FPNLEDTLKYA+MLE+AGC LLAVHGRTRDEKDGKKFRADW AI
Sbjct: 204 KLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAI 263

Query: 256 KAVKDAVRIPVLANGNIRHVDDVRDCLEETGVEGVLSAETLLENPALFAGFRTAEWVSGS 315
           K VK+A+RIPVLANGN+R ++DV +C++ETGVEGVLSAETLLENPA FAGFRTAEW   +
Sbjct: 264 KEVKNAMRIPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTAEWAKDN 323

Query: 316 EGTIVDSEGTIVDGRLDQADLVIEYLKLCEKYPVPWRMIRSHVHKMLGDWFSLQPHIREE 375
           E      E   VDG LDQ DLV+EYLKLCEK+PVPWRMIRSHVHKMLG+WF + P +RE+
Sbjct: 324 E------EEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRIHPQVREQ 377

Query: 376 LNQQSKLTFEFLYDMVDRLRATGTRIPLYLKDDRVETL 413
           LN Q+ LTFEFLY +VD+LR  G R+PLY K  +++TL
Sbjct: 378 LNAQNILTFEFLYGLVDQLRELGGRVPLY-KKKKIDTL 414


>AT3G49640.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr3:18400480-18402809 REVERSE LENGTH=329
          Length = 329

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 18/247 (7%)

Query: 81  KFLVAPMVDNSELPFRMLCRKYGAEGAYTPMLHSRIFTETEKYRKEE------------- 127
           K ++APMV    L FRML  +YGA+  Y   +      + E+                  
Sbjct: 6   KLVLAPMVRVGTLSFRMLAAEYGADITYGEEIIDHKLVKCERRLNVASGTSEFVEKGTDN 65

Query: 128 --FTTCKEDRPLFV-QFCANDPDVLLEAARKVEPYCDYVDINLGCPQRIAKRGYYGAFLM 184
             F+TC E++   V Q   +D    L+A+  V      +DIN+GCP+  + +G  GA L+
Sbjct: 66  VVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGMGAALL 125

Query: 185 DNLPLVKSLVENLALNLQVPVSCKIRLFPNLEDTLKYARMLEEAGCFLLAVHGRTRDEKD 244
               L+  ++  L  NL VPV+CKIRL  +  DT++ AR +E+ G   LAVHGR     D
Sbjct: 126 SKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHGRKI--AD 183

Query: 245 GKKFRADWKAIKAVKDAVRIPVLANGNIRHVDDVRDCLEETGVEGVLSAETLLENPALFA 304
             +  A W  I  V  A+ IPV+ANG++   DD       TG   V+ A   + N ++F+
Sbjct: 184 RPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNASIFS 243

Query: 305 GFRTAEW 311
               + W
Sbjct: 244 PKGKSHW 250


>AT3G49640.2 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr3:18400480-18402593 REVERSE LENGTH=290
          Length = 290

 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 3/185 (1%)

Query: 128 FTTCKEDRPLFV-QFCANDPDVLLEAARKVEPYCDYVDINLGCPQRIAKRGYYGAFLMDN 186
           F+TC E++   V Q   +D    L+A+  V      +DIN+GCP+  + +G  GA L+  
Sbjct: 29  FSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGMGAALLSK 88

Query: 187 LPLVKSLVENLALNLQVPVSCKIRLFPNLEDTLKYARMLEEAGCFLLAVHGRTRDEKDGK 246
             L+  ++  L  NL VPV+CKIRL  +  DT++ AR +E+ G   LAVHGR     D  
Sbjct: 89  PELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHGRKI--ADRP 146

Query: 247 KFRADWKAIKAVKDAVRIPVLANGNIRHVDDVRDCLEETGVEGVLSAETLLENPALFAGF 306
           +  A W  I  V  A+ IPV+ANG++   DD       TG   V+ A   + N ++F+  
Sbjct: 147 RDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNASIFSPK 206

Query: 307 RTAEW 311
             + W
Sbjct: 207 GKSHW 211


>AT4G38890.1 | Symbols:  | FMN-linked oxidoreductases superfamily
           protein | chr4:18135909-18139100 REVERSE LENGTH=691
          Length = 691

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 8/200 (4%)

Query: 79  RPKFLVAPMVDNSELPFRMLCRKYGAEGAYTPMLHSRIFTETEKYRKEEFTTCKEDRPLF 138
           R K  +AP+     LPFR LC+  GA+     M       + +            +    
Sbjct: 337 RDKLYLAPLTTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFG 396

Query: 139 VQFCANDPDVLLEAARKVEPYC--DYVDINLGCPQRIAKRGYYGAFLMDNLPLVKSLVEN 196
           VQ C + PD +      ++  C  D++DIN+GCP  +      G+ L++    +K++VE 
Sbjct: 397 VQICGSYPDTVSRVVELIDRECTVDFIDINMGCPIDMVVNKSAGSALLNKPLRMKNIVEV 456

Query: 197 LALNLQVPVSCKIR--LFPNLEDTLKYARMLEEAGCFLLAVHGRTRDEKDGKKFRADWKA 254
            +  ++ P++ K+R   F            +   G   + +HGR+R ++  K   ADW  
Sbjct: 457 SSSIVETPITIKVRTAFFEGKNRIDSLIADIGNWGATAVTIHGRSRQQRYSKS--ADWDY 514

Query: 255 I-KAVKDA-VRIPVLANGNI 272
           I +  K+A   + V+ NG++
Sbjct: 515 IYQCTKNATTNLQVIGNGDV 534


>AT3G63510.1 | Symbols:  | FMN-linked oxidoreductases superfamily
           protein | chr3:23450542-23452682 FORWARD LENGTH=419
          Length = 419

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 24/240 (10%)

Query: 80  PKFLVAPMVDNSELPFRMLCRKYGAEG-AYTPMLHSRIFTETEKYRKEEFTTCKEDRPLF 138
           P F VAPM+D ++  +R L R        YT M+ +      +           +  P+ 
Sbjct: 52  PSFSVAPMMDWTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQHPIV 111

Query: 139 VQFCANDPDVLLEAARKVEPYC-DYVDINLGCPQ-RIAKRGYYGAFLMDNLPLVKSLVEN 196
           +Q   ++ + L +AA+  + Y  D +++N GCP  ++A  G +G  LM    LV   +  
Sbjct: 112 LQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSA 171

Query: 197 LALNLQVPVSCKIRL-------FPNLEDTLKYARMLEEAGCFLLAVHGRTRDEKDGKKFR 249
           +A N  VPV+ K R+       +  L D +     L     F++     +R    G    
Sbjct: 172 IAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIV----HSRKALLGGISP 227

Query: 250 ADWKAI---------KAVKDAVRIPVLANGNIRHVDDVRDCLEETGVEGVLSAETLLENP 300
           AD + I           V+D   +    NG I  V  V   L+E G  GV+       NP
Sbjct: 228 ADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSVSKVNAALKE-GAHGVMVGRAAYNNP 286