Miyakogusa Predicted Gene

Lj4g3v0803490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0803490.1 Non Chatacterized Hit- tr|I1K283|I1K283_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.5,0,MORTALITY
FACTOR 4-LIKE PROTEIN,MRG; MRG,MRG domain; seg,NULL,CUFF.48062.1
         (202 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37280.1 | Symbols:  | MRG family protein | chr4:17546748-175...   271   2e-73
AT1G02740.1 | Symbols:  | MRG family protein | chr1:599734-60202...   192   9e-50

>AT4G37280.1 | Symbols:  | MRG family protein |
           chr4:17546748-17549362 REVERSE LENGTH=320
          Length = 320

 Score =  271 bits (693), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 129/202 (63%), Positives = 160/202 (79%), Gaps = 1/202 (0%)

Query: 2   DAKVDKEDIKSNVSKGKKRKSDSGAEKGSATIEKFVKIQIPATLKKQLVDDWDFVTQQDK 61
           D K DK+D K+N +KGKKRK +SG EK + T EK +KIQIPA+LKKQL DDW+++ Q+DK
Sbjct: 119 DTKADKDDTKTNAAKGKKRKHESGNEKDNVTAEKLMKIQIPASLKKQLTDDWEYIAQKDK 178

Query: 62  LVKLPRSPTIDDILTKYLEYKSKKDSLAADSIGEILKGIRCYFDKALPMMLLYKKERKQY 121
           +VKLPRSP +D+IL+KYLE+K+KKD +  DS+ EILKGIR YFDKALP+MLLYKKER+QY
Sbjct: 179 VVKLPRSPNVDEILSKYLEFKTKKDGMVTDSVAEILKGIRSYFDKALPVMLLYKKERRQY 238

Query: 122 SELVVDNASPSTIYGAEHLLRLFVKLPELLAYVNIEEETLTRXXXXXXXXXXXXXXNQNT 181
            E +VD+ SPST+YGAEHLLRLFVKLP+L +YVN+EEET +R              NQ+T
Sbjct: 239 QESIVDDTSPSTVYGAEHLLRLFVKLPDLFSYVNMEEETWSRMQQTLSDFLKFIQKNQST 298

Query: 182 FFL-SAYDVTKVSEGKGKGNDE 202
           F L SAYD  KVS+GKGKG D+
Sbjct: 299 FLLPSAYDSDKVSDGKGKGKDD 320


>AT1G02740.1 | Symbols:  | MRG family protein | chr1:599734-602021
           REVERSE LENGTH=327
          Length = 327

 Score =  192 bits (489), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 103/198 (52%), Positives = 127/198 (64%), Gaps = 2/198 (1%)

Query: 1   MDAKVDKEDIKS-NVSKGKKRKSDS-GAEKGSATIEKFVKIQIPATLKKQLVDDWDFVTQ 58
           M  KV K   +S NV++G+KRK DS   EK     +  +   IP  L+KQL+DD++FVTQ
Sbjct: 128 MAWKVSKMKPRSPNVARGRKRKQDSVDTEKNVLPSDNLLSFNIPPALRKQLLDDFEFVTQ 187

Query: 59  QDKLVKLPRSPTIDDILTKYLEYKSKKDSLAADSIGEILKGIRCYFDKALPMMLLYKKER 118
             KLV+LPRSP +D IL KY++ + KK     DS+ EILKG+RCYFDKALP+MLLY  ER
Sbjct: 188 MQKLVQLPRSPNVDGILKKYIDSQMKKHGRVTDSLEEILKGLRCYFDKALPVMLLYNNER 247

Query: 119 KQYSELVVDNASPSTIYGAEHLLRLFVKLPELLAYVNIEEETLTRXXXXXXXXXXXXXXN 178
           KQY E V    SPST+YGAEHLLRLFVKLPELL +VN+ EETL                N
Sbjct: 248 KQYEESVSGGVSPSTVYGAEHLLRLFVKLPELLVHVNMAEETLKELQDNFVDILRFLRKN 307

Query: 179 QNTFFLSAYDVTKVSEGK 196
           Q+  F+S Y   +  E K
Sbjct: 308 QSVLFVSTYKAVEEMEKK 325