Miyakogusa Predicted Gene

Lj4g3v0783220.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0783220.3 Non Chatacterized Hit- tr|I3T8S7|I3T8S7_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,87.45,0,NATRESASSCMP,Natural resistance-associated macrophage
protein; NATURAL RESISTANCE-ASSOCIATED MACROPH,CUFF.48045.3
         (238 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G47240.1 | Symbols: NRAMP2, ATNRAMP2 | NRAMP metal ion transp...   392   e-109
AT2G23150.1 | Symbols: NRAMP3, ATNRAMP3 | natural resistance-ass...   390   e-109
AT5G67330.1 | Symbols: ATNRAMP4, NRAMP4 | natural resistance ass...   378   e-105
AT4G18790.1 | Symbols: NRAMP5, ATNRAMP5 | NRAMP metal ion transp...   351   3e-97
AT1G15960.1 | Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transp...   158   4e-39
AT1G80830.1 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | natural resista...   154   3e-38

>AT1G47240.1 | Symbols: NRAMP2, ATNRAMP2 | NRAMP metal ion
           transporter 2 | chr1:17309043-17311308 REVERSE
           LENGTH=530
          Length = 530

 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/230 (80%), Positives = 215/230 (93%)

Query: 1   MALSFAWMFGETKPCGKDLLLGILVPKLSSRTIQQAVGVVGCLIMPYNLFLHSALVQSRK 60
           M LSFAWMFGETKP GK+L++GIL+P+LSS+TI+QAVGVVGC+IMP+N+FLHSALVQSRK
Sbjct: 216 MGLSFAWMFGETKPSGKELMIGILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRK 275

Query: 61  IDHTNKGRVQEALNYYSIESTIALLVSFVINIFVTSVFAKGFYGSQRANSIGLANAGQYL 120
           ID   K RVQEALNYY IES++AL +SF+IN+FVT+VFAKGFYG+++AN+IGL NAGQYL
Sbjct: 276 IDPKRKSRVQEALNYYLIESSVALFISFMINLFVTTVFAKGFYGTEKANNIGLVNAGQYL 335

Query: 121 QEAYGSGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAI 180
           QE +G G+ PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLR+KKWMRA+ITRSCAI
Sbjct: 336 QEKFGGGLLPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRAVITRSCAI 395

Query: 181 IPTMIVALIFDSSEQSLDVLSGWLNVLQSVQIPFALIPLLCLVSKEEIMG 230
           +PTMIVA++F++SE SLDVL+ WLNVLQSVQIPFAL+PLL LVSKEEIMG
Sbjct: 396 VPTMIVAIVFNTSEASLDVLNEWLNVLQSVQIPFALLPLLTLVSKEEIMG 445


>AT2G23150.1 | Symbols: NRAMP3, ATNRAMP3 | natural
           resistance-associated macrophage protein 3 |
           chr2:9856422-9858565 REVERSE LENGTH=509
          Length = 509

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/231 (80%), Positives = 212/231 (91%)

Query: 1   MALSFAWMFGETKPCGKDLLLGILVPKLSSRTIQQAVGVVGCLIMPYNLFLHSALVQSRK 60
           M +SFAWMFG+ KP G +LL+GILVPKLSSRTIQ+AVGVVGC+IMP+N+FLHSALVQSR+
Sbjct: 204 MGVSFAWMFGQAKPSGSELLIGILVPKLSSRTIQKAVGVVGCIIMPHNVFLHSALVQSRE 263

Query: 61  IDHTNKGRVQEALNYYSIESTIALLVSFVINIFVTSVFAKGFYGSQRANSIGLANAGQYL 120
           +D   K RVQEALNYY+IESTIAL +SF+IN+FVT+VFAKGFY +  ANSIGL NAGQYL
Sbjct: 264 VDKRQKYRVQEALNYYTIESTIALFISFLINLFVTTVFAKGFYNTDLANSIGLVNAGQYL 323

Query: 121 QEAYGSGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAI 180
           QE YG GVFPILYIW IGLLAAGQSSTITGTYAGQFIMGGFLN ++KKW+RALITRSCAI
Sbjct: 324 QEKYGGGVFPILYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNFKMKKWLRALITRSCAI 383

Query: 181 IPTMIVALIFDSSEQSLDVLSGWLNVLQSVQIPFALIPLLCLVSKEEIMGT 231
           IPT+IVAL+FDSSE +LDVL+ WLNVLQS+QIPFALIPLLCLVSKE+IMG+
Sbjct: 384 IPTIIVALVFDSSEATLDVLNEWLNVLQSIQIPFALIPLLCLVSKEQIMGS 434


>AT5G67330.1 | Symbols: ATNRAMP4, NRAMP4 | natural resistance
           associated macrophage protein 4 | chr5:26861822-26863580
           FORWARD LENGTH=512
          Length = 512

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/231 (77%), Positives = 210/231 (90%)

Query: 1   MALSFAWMFGETKPCGKDLLLGILVPKLSSRTIQQAVGVVGCLIMPYNLFLHSALVQSRK 60
           MAL+FAWMFG+TKP G +LL+G LVPKLSSRTI+QAVG+VGC+IMP+N+FLHSALVQSR+
Sbjct: 200 MALAFAWMFGQTKPSGTELLVGALVPKLSSRTIKQAVGIVGCIIMPHNVFLHSALVQSRE 259

Query: 61  IDHTNKGRVQEALNYYSIESTIALLVSFVINIFVTSVFAKGFYGSQRANSIGLANAGQYL 120
           +D   + RV+EAL YYSIEST AL VSF+IN+FVT+VFAK FYG++ A++IGLANAGQYL
Sbjct: 260 VDPKKRFRVKEALKYYSIESTGALAVSFIINVFVTTVFAKSFYGTEIADTIGLANAGQYL 319

Query: 121 QEAYGSGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAI 180
           Q+ YG G FPILYIW IG+LAAGQSSTITGTYAGQFIMGGFLNL++KKW+RALITRSCAI
Sbjct: 320 QDKYGGGFFPILYIWAIGVLAAGQSSTITGTYAGQFIMGGFLNLKMKKWVRALITRSCAI 379

Query: 181 IPTMIVALIFDSSEQSLDVLSGWLNVLQSVQIPFALIPLLCLVSKEEIMGT 231
           IPTMIVAL+FDSS+  LD L+ WLNVLQSVQIPFA+IPLLCLVS E+IMG+
Sbjct: 380 IPTMIVALVFDSSDSMLDELNEWLNVLQSVQIPFAVIPLLCLVSNEQIMGS 430


>AT4G18790.1 | Symbols: NRAMP5, ATNRAMP5 | NRAMP metal ion
           transporter family protein | chr4:10317785-10319660
           REVERSE LENGTH=530
          Length = 530

 Score =  351 bits (900), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 166/230 (72%), Positives = 202/230 (87%)

Query: 1   MALSFAWMFGETKPCGKDLLLGILVPKLSSRTIQQAVGVVGCLIMPYNLFLHSALVQSRK 60
           MALSFAWMF ETKP  ++L +GI++PKL S+TI++AVGVVGC+I P+N+FLHSALVQSRK
Sbjct: 218 MALSFAWMFNETKPSVEELFIGIIIPKLGSKTIREAVGVVGCVITPHNVFLHSALVQSRK 277

Query: 61  IDHTNKGRVQEALNYYSIESTIALLVSFVINIFVTSVFAKGFYGSQRANSIGLANAGQYL 120
            D     RVQEALNYY+IES+ AL VSF+IN+FVT+VFAKGFYG+++A+SIGL NAG YL
Sbjct: 278 TDPKEINRVQEALNYYTIESSAALFVSFMINLFVTAVFAKGFYGTKQADSIGLVNAGYYL 337

Query: 121 QEAYGSGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRIKKWMRALITRSCAI 180
           QE YG GVFPILYIWGIGLLAAGQSSTITGTYAGQFIM GFL+L++++W+ A ITRS AI
Sbjct: 338 QEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMEGFLDLQMEQWLSAFITRSFAI 397

Query: 181 IPTMIVALIFDSSEQSLDVLSGWLNVLQSVQIPFALIPLLCLVSKEEIMG 230
           +PTM VA++F++SE SLDVL+ WLN+LQS+QIPFA+IPLL +VS E IMG
Sbjct: 398 VPTMFVAIMFNTSEGSLDVLNEWLNILQSMQIPFAVIPLLTMVSNEHIMG 447


>AT1G15960.1 | Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion
           transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527
          Length = 527

 Score =  158 bits (399), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/245 (41%), Positives = 148/245 (60%), Gaps = 14/245 (5%)

Query: 1   MALSFAWMFGETKPCGKDLLLGILVPKLSSR-TIQQAVGVVGCLIMPYNLFLHSALVQSR 59
           +AL F      +KP  K++L G+ VP+L        A+ ++G ++MP+NLFLHSALV SR
Sbjct: 184 IALCFFVELHYSKPDPKEVLYGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSR 243

Query: 60  KIDHTNKGRVQEALNYYSIESTIALLVSFVINIFVTSVF-----AKGFYGSQRAN--SIG 112
           KI  +  G ++EA  YY IES +AL+V+F+IN+ V SV      A       RA+   + 
Sbjct: 244 KIPRSVTG-IKEACRYYLIESGLALMVAFLINVSVISVSGAVCNASDLSPEDRASCQDLD 302

Query: 113 LANAGQYLQEAYGSGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRIKKWMRA 172
           L  A   L+   G     +   + I LLA+GQSSTITGTYAGQ++M GFL+LR++ W+R 
Sbjct: 303 LNKASFLLRNVVGKWSSKL---FAIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWLRN 359

Query: 173 LITRSCAIIPTMIVALIFDSSEQSLDVLSGWLNVLQSVQIPFALIPLLCLVSKEEIMGTG 232
            +TR  AIIP++IVALI  S+     ++    +++ S ++PFAL+PLL   S +  MG+ 
Sbjct: 360 FLTRCLAIIPSLIVALIGGSAGAGKLIIIA--SMILSFELPFALVPLLKFTSSKTKMGSH 417

Query: 233 CSEWV 237
            +  V
Sbjct: 418 ANSLV 422


>AT1G80830.1 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | natural
           resistance-associated macrophage protein 1 |
           chr1:30373066-30375644 REVERSE LENGTH=532
          Length = 532

 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/239 (41%), Positives = 146/239 (61%), Gaps = 14/239 (5%)

Query: 1   MALSFAWMFGETKPCGKDLLLGILVPKLSSR-TIQQAVGVVGCLIMPYNLFLHSALVQSR 59
           +A+ F      +KP   ++L G+ VP+L        A+ ++G ++MP+NLFLHSALV SR
Sbjct: 192 IAICFFVELHYSKPDPGEVLHGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSR 251

Query: 60  KIDHTNKGRVQEALNYYSIESTIALLVSFVINIFVTSVF-----AKGFYGSQRAN--SIG 112
           KI  +  G ++EA  +Y IES +AL+V+F+IN+ V SV      A       RAN   + 
Sbjct: 252 KIPRSASG-IKEACRFYLIESGLALMVAFLINVSVISVSGAVCNAPNLSPEDRANCEDLD 310

Query: 113 LANAGQYLQEAYGSGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRIKKWMRA 172
           L  A   L+   G     +   + I LLA+GQSSTITGTYAGQ++M GFL+LR++ W+R 
Sbjct: 311 LNKASFLLRNVVGKWSSKL---FAIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWLRN 367

Query: 173 LITRSCAIIPTMIVALIFDSSEQSLDVLSGWLNVLQSVQIPFALIPLLCLVSKEEIMGT 231
           L+TR  AIIP++IVALI  S+     ++    +++ S ++PFAL+PLL   S +  MG+
Sbjct: 368 LLTRCLAIIPSLIVALIGGSAGAGKLIIIA--SMILSFELPFALVPLLKFTSCKTKMGS 424