Miyakogusa Predicted Gene

Lj4g3v0772150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0772150.1 Non Chatacterized Hit- tr|I1MVQ3|I1MVQ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28984
PE,81.99,0,TETRATRICOPEPTIDE REPEAT PROTEIN, TPR,NULL,CUFF.48038.1
         (372 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37460.1 | Symbols: SRFR1 | Tetratricopeptide repeat (TPR)-li...   491   e-139

>AT4G37460.1 | Symbols: SRFR1 | Tetratricopeptide repeat (TPR)-like
            superfamily protein | chr4:17608623-17615534 REVERSE
            LENGTH=1052
          Length = 1052

 Score =  491 bits (1264), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/375 (65%), Positives = 304/375 (81%), Gaps = 7/375 (1%)

Query: 1    MAGLAAIEIAQKVSKAWRSLHAEWKYS-KGNSKNGKRAKRRERINRPSQNRGGVGCSTSS 59
            MAGLA IEIAQKVSKAWR    EW+ S KG +KNGK+ +RRER N  SQNRGG GCS+SS
Sbjct: 681  MAGLAVIEIAQKVSKAWR---IEWRNSTKGTTKNGKKNRRRERTNILSQNRGGAGCSSSS 737

Query: 60   TLETSL-HGTVDDRSSS-CTMSWQDVYSLAVRWRQISEPCDPVMWVNKLSKDLNSGIGSH 117
              ETS  + +++DRSS    +SWQDVYS AVRWRQISEPCDPV+WVNKLS++ NSG GSH
Sbjct: 738  FSETSTGYASLEDRSSGRSILSWQDVYSPAVRWRQISEPCDPVVWVNKLSEEFNSGFGSH 797

Query: 118  TPMILGQAKVVRYFPNYERTLDLAKTVMKERSFVYSNTDEMINLSKDGKLEQVMLAKSCS 177
            TPM+LGQAKVVRYFPNYERTL LAK+++K++  V S  D++I+LSKD K+E++M A++C 
Sbjct: 798  TPMVLGQAKVVRYFPNYERTLTLAKSIIKDKLSVRSKKDKVIDLSKDEKIEKIMRAETCD 857

Query: 178  DLYRVIGEDFWLATSCNSTAFEGKQLEGTRIT-LEKKGEHGFDFAIRTPCTSARWEDFDA 236
            +L+ ++GEDFW+AT C+ST  EGK+LEGTRIT ++K G  G+DF+IRTPCT ARW DFD 
Sbjct: 858  ELHNIVGEDFWVATWCDSTGSEGKRLEGTRITCIQKPGRLGYDFSIRTPCTPARWSDFDE 917

Query: 237  EMEVAWETLCSAYCGENYGSTDFNVLEDVRNAILRMTYYWYNFRPLYKGSAAVGFVVMQG 296
            EM  AWE LC+AYCGENYGST+ + LE VR+AILRMTYYWYNF PL +G+A  GFVV+ G
Sbjct: 918  EMTSAWEALCTAYCGENYGSTELDALETVRDAILRMTYYWYNFMPLARGTAVTGFVVLLG 977

Query: 297  LLLAANMEFTGSIPQGLQVDLEAILSSDTNSFVDSVETWLYPSLKLTTLWKGYPDIVSTF 356
            LLLAANMEFT +IP+GLQ+D EAIL+ +  SFVDSV++WLYPSLK+ T W+ + +I S F
Sbjct: 978  LLLAANMEFTETIPKGLQIDWEAILNVEPGSFVDSVKSWLYPSLKINTSWRDHTEISSAF 1037

Query: 357  ETIGSVVAALSFSDD 371
             T G+VVAALS  +D
Sbjct: 1038 STTGAVVAALSTYND 1052