Miyakogusa Predicted Gene

Lj4g3v0758330.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0758330.3 Non Chatacterized Hit- tr|I1K9P8|I1K9P8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,48.1,0.00000000000001, ,CUFF.47995.3
         (96 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09730.2 | Symbols:  | Cysteine proteinases superfamily prote...    50   2e-07
AT1G09730.1 | Symbols:  | Cysteine proteinases superfamily prote...    50   2e-07

>AT1G09730.2 | Symbols:  | Cysteine proteinases superfamily protein
           | chr1:3148017-3154236 REVERSE LENGTH=931
          Length = 931

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 6/79 (7%)

Query: 15  GVLLFRSAVLRCAVVHRHHCRDDLGIDELKIAIVDYNWSLRHKQITSLNEKYKAMWSTLL 74
           G+++ R  VL    +   +C +D+  +ELKIA+ ++NW  + ++I SL+ KY A+W+T L
Sbjct: 303 GLIILRIRVL----LKDENCHEDM--EELKIAVKEHNWPNKQQKINSLHVKYPAVWNTDL 356

Query: 75  DMDVDGDENLLPGPRCYFP 93
           + DV+     L   + YFP
Sbjct: 357 EDDVEVSGYNLNQQKRYFP 375


>AT1G09730.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr1:3148017-3154236 REVERSE LENGTH=963
          Length = 963

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 6/79 (7%)

Query: 15  GVLLFRSAVLRCAVVHRHHCRDDLGIDELKIAIVDYNWSLRHKQITSLNEKYKAMWSTLL 74
           G+++ R  VL    +   +C +D+  +ELKIA+ ++NW  + ++I SL+ KY A+W+T L
Sbjct: 335 GLIILRIRVL----LKDENCHEDM--EELKIAVKEHNWPNKQQKINSLHVKYPAVWNTDL 388

Query: 75  DMDVDGDENLLPGPRCYFP 93
           + DV+     L   + YFP
Sbjct: 389 EDDVEVSGYNLNQQKRYFP 407