Miyakogusa Predicted Gene

Lj4g3v0758040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0758040.1 Non Chatacterized Hit- tr|I3T3Q6|I3T3Q6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,86.96,0.000000000000005,seg,NULL; coiled-coil,NULL,CUFF.47984.1
         (203 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49890.1 | Symbols:  | unknown protein; Has 27 Blast hits to ...   111   4e-25

>AT3G49890.1 | Symbols:  | unknown protein; Has 27 Blast hits to 27
           proteins in 13 species: Archae - 0; Bacteria - 0;
           Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other
           Eukaryotes - 3 (source: NCBI BLink). |
           chr3:18499296-18500501 FORWARD LENGTH=220
          Length = 220

 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 100/154 (64%), Gaps = 14/154 (9%)

Query: 26  WKAAIDSVAGTNSYASSFTNGSSATKHNDRHDNSEGN---KPEKIQLKHYQLKAQKLLDD 82
           W+AAI+S+A T  Y +S T  ++   HN       G+   KP+K  L H Q+K + LL++
Sbjct: 20  WRAAINSIATTTVYGASATKPAATQSHN------YGDFRLKPKK--LTHGQIKVKNLLNE 71

Query: 83  ILEKTLEIVKEPVPVLNEDPKVNDECGGIRLFKHSQPGIILDHADEPEPPRKRPRILPGE 142
           ++EKTL+ V++PV +  + P+  ++CG +RLFK    GI+ DH DE   P+K+P + P +
Sbjct: 72  MVEKTLDFVEDPVNIPEDKPE--NDCG-VRLFKRCATGIVFDHVDEIRGPKKKPNLRPDK 128

Query: 143 DIDEKSKKFRRRIRSVAVDGEGLMAAANDAYKKS 176
            ++  SK+F++R++S+AVDG  ++ AA +A KK+
Sbjct: 129 GVEGSSKEFKKRVKSIAVDGSDILTAAVEAAKKA 162