Miyakogusa Predicted Gene
- Lj4g3v0756950.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0756950.2 tr|A9TSP1|A9TSP1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_197840,21.33,2e-18,PPR,Pentatricopeptide repeat; FAMILY
NOT NAMED,NULL; PPR: pentatricopeptide repeat
domain,Pentatrico,CUFF.47974.2
(551 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 597 e-171
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 338 5e-93
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 325 4e-89
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 92 1e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 92 1e-18
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 86 8e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 86 1e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 84 2e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 80 4e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 80 4e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 79 8e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 77 3e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 76 5e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 7e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 75 1e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 74 2e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 73 4e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 73 5e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 6e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 70 3e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 68 2e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 2e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 63 5e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 60 4e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 59 6e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 59 9e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 2e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 56 7e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 9e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 55 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 54 2e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 53 7e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 52 1e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 50 4e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 50 4e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 597 bits (1540), Expect = e-171, Method: Compositional matrix adjust.
Identities = 305/553 (55%), Positives = 403/553 (72%), Gaps = 22/553 (3%)
Query: 1 MEALQLHAHPLPLRPVAKFEPDTDKIRRNLLQKGVHPTPKIVHTIRKKEIQKHNRKLKRQ 60
M+A + P R +FEPD +KI+R LL+ GV PTPKI++ +RKKEIQKHNR+ KR+
Sbjct: 1 MDASVVRFSQSPARVPPEFEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRE 60
Query: 61 AIVSPPL-SESQTKALSEEQHFQELKHEYKEFTRAVERE---SVGLSVVGKPWEGIQRVE 116
+ +E+Q +++ EE FQ L+ EYK+FTR++ + VGL +VG PWEGI+RV+
Sbjct: 61 TESEAEVYTEAQKQSMEEEARFQTLRREYKQFTRSISGKRGGDVGL-MVGNPWEGIERVK 119
Query: 117 FLERTRGNGEYGGEKLKRESLNELKEMFQARKM------DQLKWVFDDDIEINEHWYNES 170
E G ++RE ++ + + K L+WV DDD+++ E ++
Sbjct: 120 LKELVSG--------VRREEVSAGELKKENLKELKKILEKDLRWVLDDDVDVEEFDLDKE 171
Query: 171 YGLLKRTQKRSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGL 230
+ KR R+E E +R LV+RLS REI K WK R+M SGL FTE Q+L+I++ LG
Sbjct: 172 FDPAKRW--RNEGEAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGR 229
Query: 231 RGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYP 290
+ WKQA +VV WVY+ K + +SRFVYTKLL+VLG ARRP+EALQIFN M G+ +YP
Sbjct: 230 KQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYP 289
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKP-KTFKFKYSKNWDPIIEPDIVIYNAVLN 349
DMAAYH IAVTLGQAGLLKELL ++E M+QKP K K KNWDP++EPD+V+YNA+LN
Sbjct: 290 DMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILN 349
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
ACVP+ QWK VSWVF +L+K+GL+PNGATYGLAMEV ++SG +D VH+ F +++ SGE P
Sbjct: 350 ACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAP 409
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+A+TYKVLVR W+EGK++EAVEA+R+ME++GVIGT SVYYELACCLC GRW DA+ EV
Sbjct: 410 KAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEV 469
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQN 529
+++RL RPLE+TFTG+I +S++GGH+DDC IF+ MKD C PNIGT N MLKVYG+N
Sbjct: 470 GRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRN 529
Query: 530 DKFSKAKFLFEEV 542
D FS+AK LFEE+
Sbjct: 530 DMFSEAKELFEEI 542
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 240/358 (67%), Gaps = 3/358 (0%)
Query: 186 IRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVY 245
I L + L+ +I +W+ S+ ++ + + +T+ ++R++ LG G W++ L V++W+
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496
Query: 246 NYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQA 305
++ + R +YT L VLGK+RRP EAL +F+ M I YPDM AY SIAVTLGQA
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556
Query: 306 GLLKELLNIVECMKQKP-KTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVF 364
G +KEL +++ M+ P K FK + WDP +EPD+V+YNAVLNACV KQW+G WV
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616
Query: 365 KQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKE 424
+QLK+ G KP+ TYGL MEV + Y+LVHE F ++++S +P AL Y+VLV T WKE
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSS-IPNALAYRVLVNTLWKE 675
Query: 425 GKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVT 484
GK DEAV + +ME RG++G+A++YY+LA CLC GR + + ++KI R+ +PL VT
Sbjct: 676 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVAN-KPLVVT 734
Query: 485 FTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+TG+I++ +D G+I + A IF+ MK CSPN+ T N MLK Y Q F +A+ LF+++
Sbjct: 735 YTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKM 792
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 28/260 (10%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
Y L+ L K + EA+ M + A Y+ +A L AG E LN+++
Sbjct: 663 LAYRVLVNTLWKEGKSDEAVHTVEDMESR-GIVGSAALYYDLARCLCSAGRCNEGLNMLK 721
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
+ + +P +V Y ++ ACV S K +++F Q+KK PN
Sbjct: 722 KICRVAN--------------KPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNL 766
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGE------------VPEALTYKVLVRTFWKE 424
T + ++ +Q G ++ ELF ++ G +P+ T+ ++ T ++
Sbjct: 767 VTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQ 826
Query: 425 GKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVT 484
K D+ A REM + G A + + G+ + E +RR R P +
Sbjct: 827 EKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLI 886
Query: 485 FTGMIKSSMDGGHIDDCACI 504
+ G HI + +
Sbjct: 887 KERFFRKLEKGDHISAISSL 906
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 325 bits (833), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 241/385 (62%), Gaps = 29/385 (7%)
Query: 186 IRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVY 245
I L + L+ +I +W+ S+ ++ + + +T+ ++R++ LG G W++ L V++W+
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496
Query: 246 NYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQA 305
++ + R +YT L VLGK+RRP EAL +F+ M I YPDM AY SIAVTLGQA
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556
Query: 306 GLLKELLNIVECMKQKP-KTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVF 364
G +KEL +++ M+ P K FK + WDP +EPD+V+YNAVLNACV KQW+G WV
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616
Query: 365 KQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKE 424
+QLK+ G KP+ TYGL MEV + Y+LVHE F ++++S +P AL Y+VLV T WKE
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSS-IPNALAYRVLVNTLWKE 675
Query: 425 GKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE-------------- 470
GK DEAV + +ME RG++G+A++YY+LA CLC GR + + V
Sbjct: 676 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLI 735
Query: 471 -----------KIRRLPRA--RPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIG 517
+++++ R +PL VT+TG+I++ +D G+I + A IF+ MK CSPN+
Sbjct: 736 YKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLV 795
Query: 518 TINTMLKVYGQNDKFSKAKFLFEEV 542
T N MLK Y Q F +A+ LF+++
Sbjct: 796 TCNIMLKAYLQGGLFEEARELFQKM 820
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 105/274 (38%), Gaps = 28/274 (10%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
Y L+ L K + EA+ M + A Y+ +A L AG E LN+V
Sbjct: 663 LAYRVLVNTLWKEGKSDEAVHTVEDMESR-GIVGSAALYYDLARCLCSAGRCNEGLNMVN 721
Query: 317 CMK--------------QKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSW 362
+ T +F+ K +P +V Y ++ ACV S K ++
Sbjct: 722 FVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAY 781
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGE------------VPE 410
+F Q+KK PN T + ++ +Q G ++ ELF ++ G +P+
Sbjct: 782 IFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPD 840
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE 470
T+ ++ T ++ K D+ A REM + G A + + G+ + E
Sbjct: 841 TYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWE 900
Query: 471 KIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACI 504
+RR R P + + G HI + +
Sbjct: 901 HMRRSNRIPPSPLIKERFFRKLEKGDHISAISSL 934
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 160/356 (44%), Gaps = 33/356 (9%)
Query: 217 TEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEAL 276
T +LL L+ LG + AL W KD++ V ++++LGK R A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 277 QIFNLMRGN---IDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTFKF--- 327
+FN ++ + +DVY +Y S+ +G +E +N+ + M++ KP +
Sbjct: 194 NMFNGLQEDGFSLDVY----SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVI 249
Query: 328 -----KYSKNWDPI-----------IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSG 371
K W+ I I PD YN ++ C + + VF+++K +G
Sbjct: 250 LNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG 309
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
+ TY ++V +S ++ ++ +G P +TY L+ + ++G +DEA+
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
E +M ++G Y L G+ + A+ E++R +P TF IK
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-AGCKPNICTFNAFIKM 428
Query: 492 SMDGGHIDDCACIFECMKDHC--SPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
+ G + IF+ + + C SP+I T NT+L V+GQN S+ +F+E+K A
Sbjct: 429 YGNRGKFTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 147/348 (42%), Gaps = 65/348 (18%)
Query: 256 RFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
+ Y LL V GK+ RPKEA+++ N M N P + Y+S+ + G+L E + +
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 316 ECMKQK---PKTFKFK------------------YSKNWDPIIEPDIVIYNAVLNACVPS 354
M +K P F + + + + +P+I +NA +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 355 KQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTY 414
++ + +F ++ GL P+ T+ + V Q+G V +F +++R+G VPE T+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 415 KVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA---IPEVEK 471
L+ + + G ++A+ R M GV S Y + L G W+ + + E+E
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 472 IRRLPRARPLEVTFTGMIKSSMDG---------------GHIDDCACIFECMKDHC---- 512
R +P E+T+ ++ + +G G I+ A + + + C
Sbjct: 553 ----GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608
Query: 513 -----------------SPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
SP+I T+N+M+ +YG+ +KA + + +K
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 128/347 (36%), Gaps = 65/347 (18%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRG-----NIDVY---------------------- 289
F YT LL+ +A + + A+ IF MR NI +
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 290 -------PDMAAYHSIAVTLGQAGLLKELLNIVECMKQK---PKTFKFK----------- 328
PD+ ++++ GQ G+ E+ + + MK+ P+ F
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 329 -------YSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGL 381
Y + D + PD+ YN VL A W+ V +++ KPN TY
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 382 AMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
+ L+H L ++ P A+ K LV K + EA A E+++RG
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 442 VIGTASVYYELACCLCYYGRWQ-----DAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
+ L + YGR Q + + + K R + + M S D G
Sbjct: 625 FSPDITT---LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 497 HIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
++ + E + P+I + NT++ Y +N + A +F E++
Sbjct: 682 KSEE--ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
PD+ +S+ G+ ++ + +++ MK++ T P + YN+++
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT--------------PSMATYNSLMY 672
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
S + + +++ G+KP+ +Y + ++ +F ++R SG VP
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ +TY + ++ + +EA+ +R M K G + Y + C R +A V
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 470 EKIRRLPRARP 480
E +R L P
Sbjct: 793 EDLRNLDPHAP 803
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 308 LKELLNIVECMKQK---PKTF-KFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWV 363
L LL++V + K F +F+ ++ P +P + +YN +L +C+ ++ + VSW+
Sbjct: 75 LSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWL 134
Query: 364 FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWK 423
+K + G+ P T+ L + S D ELF ++ G P T+ +LVR + K
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEV 483
G D+ +E + ME GV+ +Y + C GR D+ VEK+R P V
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMRE-EGLVPDIV 253
Query: 484 TFTGMIKSSMDGGHIDDCACIFECMK-----DHCSPNIGTINTMLKVYGQNDKFSKAKFL 538
TF I + G + D + IF M+ PN T N MLK + + AK L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 539 FEEVK 543
FE ++
Sbjct: 314 FESIR 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 46/314 (14%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVY-----PDMAAYHSIAVTLGQAGLLKELL 312
+ ++ L K + +A +IF+ M +D Y P+ Y+ + + GLL++
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDME--LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311
Query: 313 NIVECMKQKPKTFKFKYSKNW---------------------DPIIEPDIVIYNAVLNAC 351
+ E +++ + W D I P I YN +++
Sbjct: 312 TLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
Query: 352 VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEA 411
+ +K++G+ P+ TYG + G D L ++ R+ +P A
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 412 LTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELAC-CLCYYGRWQDAIPEVE 470
T +L+ + WK G++ EA E +R+M ++G G +V + LC G AI V+
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKMNEKGY-GLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 471 KIRRLPRAR--PLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQ 528
+R A L ++ G++ S+ ++++C P++ T +T+L +
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSL--------------IENNCLPDLITYSTLLNGLCK 536
Query: 529 NDKFSKAKFLFEEV 542
+F++AK LF E+
Sbjct: 537 AGRFAEAKNLFAEM 550
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 360 VSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVR 419
+ V L ++ P+ TY + ++G + LF ++ P+++ Y + +
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 420 TFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRAR 479
F K+GK+ A +++MEK+G + Y L L ++ I E+ + + +
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL----GIKNQIFEIHGLMDEMKEK 623
Query: 480 ---PLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKA 535
P T+ I+ +G ++D + E M+ + +PN+ + +++ + + F A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 536 KFLFE 540
+ +FE
Sbjct: 684 QEVFE 688
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 18/288 (6%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
YT ++ VL KA R EA+++F + N V P AY+++ + G AG E +++E
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+ K P ++ YN +L + VF+++KK PN +
Sbjct: 334 QRAKGSI--------------PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLS 378
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + +++ ++G D EL ++++G P T ++V K K+DEA EM
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+ + + L L GR DA EK+ R + +T +IK+ + G
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD-SDCRTNSIVYTSLIKNFFNHGR 497
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
+D I++ M +CSP++ +NT + + + K + +FEE+K
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 36/329 (10%)
Query: 232 GCWK-----QALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNI 286
GC K + VVQ + +K + + YT L+ L +F M+ +
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSA---YTTLIGAFSAVNHSDMMLTLFQQMQ-EL 197
Query: 287 DVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNA 346
P + + ++ + G + L++++ MK ++ DIV+YN
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS--------------LDADIVLYNV 243
Query: 347 VLNACVPSKQWKG---VSW-VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
C+ S G ++W F +++ +GLKP+ TY + V ++ D E+F +
Sbjct: 244 ----CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW 462
++ VP Y ++ + GK DEA + +G I + Y + CL G+
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 463 QDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINT 521
+A+ E++++ A P T+ +I G +D + + M K PN+ T+N
Sbjct: 360 DEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 522 MLKVYGQNDKFSKAKFLFEEV--KVATSD 548
M+ ++ K +A +FEE+ KV T D
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 141/324 (43%), Gaps = 18/324 (5%)
Query: 222 LRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQ-SRFVYTKLLAVLGKARRPKEALQIFN 280
+R + ++ R C Q L ++ D++ + L+ LGK R +A +++
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Query: 281 LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPD 340
M + D + Y S L+K N + K +K ++N PD
Sbjct: 472 KMLDS-DCRTNSIVYTS---------LIKNFFNHGR-KEDGHKIYKDMINQN----CSPD 516
Query: 341 IVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFG 400
+ + N ++ + + + +F+++K P+ +Y + + +++G + +ELF
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 401 QIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYG 460
++ G V + Y +++ F K GKV++A + + EM+ +G T Y + L
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Query: 461 RWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTI 519
R +A E+ + R V ++ +I G ID+ I E M+ +PN+ T
Sbjct: 637 RLDEAYMLFEEAKS-KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 520 NTMLKVYGQNDKFSKAKFLFEEVK 543
N++L + ++ ++A F+ +K
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMK 719
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 101/244 (41%), Gaps = 20/244 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y ++ L K R EA +F + + ++ Y S+ G+ G + E I+E
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+ QK T P++ +N++L+A V +++ F+ +K+ PN
Sbjct: 683 LMQKGLT--------------PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TYG+ + + ++ + ++++ G P ++Y ++ K G + EA
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+ G + ++ Y + L R DA E+ RR R P+ ++ +D H
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR--RGLPIHNKTCVVL---LDTLH 843
Query: 498 IDDC 501
+DC
Sbjct: 844 KNDC 847
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 193/453 (42%), Gaps = 47/453 (10%)
Query: 100 VGLSVVGKPWEGIQRVEFLERTRGNGEYGGEKLKRESLNELKEMFQARKMDQLKWVFDDD 159
+G +VV K + R F+ R NG +GG NE+ F L FD+D
Sbjct: 7 LGTNVVRKAY----RFLFISRKFCNGNFGG--------NEIDNGFP-----DLDCGFDED 49
Query: 160 IEINE--HWYNESYGLLKRTQKRSEVEVIRFLVERLSDREITTKDWKLSRL-MKLSGLPF 216
I+E E + R + + R LV D L L +++SGL
Sbjct: 50 SNISELRSIDREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLV 109
Query: 217 TEGQLLRILEMLGLRG---CWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPK 273
E L+ IL L C K A W + R + Y L+ + + K
Sbjct: 110 RE-VLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNS--YHLLMKIFAECGEYK 166
Query: 274 EALQIFNLMRGNIDVYPDMA-AYHSIAVTLGQAGLLKELLNIVECMKQKPKTFK-FKYSK 331
++ + M D +P A ++ + + G+AGL K+ +V+ MK K ++ FK+S
Sbjct: 167 AMWRLVDEMVQ--DGFPTTARTFNLLICSCGEAGLAKQA--VVQFMKSKTFNYRPFKHS- 221
Query: 332 NWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGN 391
YNA+LN+ + KQ+K + WV+KQ+ + G P+ TY + + + G
Sbjct: 222 ------------YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK 269
Query: 392 YDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYE 451
D LF ++ R G P++ TY +L+ K K A+ + M++ G+ + Y
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 452 LACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH 511
L L G + ++++ + RP V +T MI + G +D +F M
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVK-AGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 512 CS-PNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
PN+ T N+M++ +F +A +L +E++
Sbjct: 389 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 15/185 (8%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ Y LL +LGK +P AL N M+ + + P + Y ++ L +AG N+
Sbjct: 290 YTYNILLHILGKGNKPLAALTTLNHMK-EVGIDPSVLHYTTLIDGLSRAG------NLEA 342
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
C K+ + PD+V Y ++ V S + +F+++ G PN
Sbjct: 343 C--------KYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + +G + L ++ G P + Y LV K GK+ EA + IRE
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 437 MEKRG 441
M K+G
Sbjct: 455 MVKKG 459
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+P ++ Y +++ + + + ++ K+G +P+ Y + + + SG D
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
E+F ++ G++P TY ++R G+ EA ++EME RG VY L L
Sbjct: 380 EMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 457 CYYGRWQDA 465
G+ +A
Sbjct: 440 RKAGKLSEA 448
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 134/291 (46%), Gaps = 18/291 (6%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGL-LKELLNIV 315
+ ++ L++ G++ +EA+ +FN M+ + P++ Y+++ G+ G+ K++
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
+ M++ ++PD + +N++L C W+ +F ++ ++ +
Sbjct: 328 DEMQRNG--------------VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQD 373
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
+Y ++ + G DL E+ Q+ +P ++Y ++ F K G+ DEA+
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
EM G+ Y L GR ++A+ + ++ + + + VT+ ++
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV-VTYNALLGGYGKQ 492
Query: 496 GHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
G D+ +F MK +H PN+ T +T++ Y + + +A +F E K A
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 121/315 (38%), Gaps = 52/315 (16%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y+ ++ KA R EAL +F MR + + D +Y+++ + G +E L+I+ M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMR-YLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
I+ D+V YNA+L ++ V VF ++K+ + PN T
Sbjct: 471 ASVG--------------IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y ++ + G Y E+F + + +G + + Y L+ K G V AV I EM
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 439 KRGVIGTASVY------------------YELACCLCYYGRWQDAIPEVEKIRRLPRARP 480
K G+ Y Y L + A+ E E R
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNR------- 629
Query: 481 LEVTFTGMIKSSMDGGHIDDC-------ACIFECMKD----HCSPNIGTINTMLKVYGQN 529
+ G + + + DC +CI E + PN+ T + +L +
Sbjct: 630 -VIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRC 688
Query: 530 DKFSKAKFLFEEVKV 544
+ F A L EE+++
Sbjct: 689 NSFEDASMLLEELRL 703
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 341 IVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG-NYDLVHELF 399
+ ++A+++A S + VF +K+ GL+PN TY ++ + G + V + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
+++R+G P+ +T+ L+ + G + A EM R + Y L +C
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 460 GRWQDAIPEVEKIRRLP--RARPLEVTFTGMIKSSMDGGHIDDCACIFECMK------DH 511
G+ A E + ++P R P V+++ +I G D+ +F M+ D
Sbjct: 388 GQMDLAF---EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 512 CSPN------------------------------IGTINTMLKVYGQNDKFSKAKFLFEE 541
S N + T N +L YG+ K+ + K +F E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 542 VK 543
+K
Sbjct: 505 MK 506
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 137/307 (44%), Gaps = 21/307 (6%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMR 283
++ +LG G + L V + + R S F YT L+ G+ R + +L++ + M+
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSR---SVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 284 GNIDVYPDMAAYHSIAVTLGQAGLLKE-LLNIVECMKQKPKTFKFKYSKNWDPIIEPDIV 342
N + P + Y+++ + GL E LL + M+ + I+PDIV
Sbjct: 204 -NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG--------------IQPDIV 248
Query: 343 IYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
YN +L+AC VF+ + G+ P+ TY +E + + V +L G++
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW 462
G +P+ +Y VL+ + K G + EA+ +M+ G A+ Y L GR+
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRY 368
Query: 463 QDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINT 521
D + ++ + P T+ +I+ +GG+ + +F M +++ P++ T
Sbjct: 369 DD-VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 522 MLKVYGQ 528
++ G+
Sbjct: 428 IIFACGK 434
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 158/367 (43%), Gaps = 78/367 (21%)
Query: 206 SRLMKLSGLPFTEGQLLRILEML----------------GLRGCWKQALSVVQWVYNYKD 249
S + KLS LP G + R L++ RG W+++L + +++
Sbjct: 78 SLINKLSSLP-PRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYM----- 131
Query: 250 HRKY---QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAG 306
R+ + +YT ++++LG+ + L++F+ M V + +Y ++ G+ G
Sbjct: 132 QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ-GVSRSVFSYTALINAYGRNG 190
Query: 307 LLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSK-QWKGVSWVFK 365
+ L +++ MK + I P I+ YN V+NAC W+G+ +F
Sbjct: 191 RYETSLELLDRMKNEK--------------ISPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 366 QLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEG 425
+++ G++P+ TY + G D +F + G VP+ TY LV TF K
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 426 KVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTF 485
++++ + + EM G ++P++ ++
Sbjct: 297 RLEKVCDLLGEMASGG-----------------------SLPDI-------------TSY 320
Query: 486 TGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
++++ G I + +F M+ C+PN T + +L ++GQ+ ++ + LF E+K
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 545 ATSDFNA 551
+ +D +A
Sbjct: 381 SNTDPDA 387
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 24/284 (8%)
Query: 250 HRKYQSRFV-YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLL 308
H Q V Y LL+ EA +F M + PD+ Y + T G+ L
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRL 298
Query: 309 KELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLK 368
+++ +++ M PDI YN +L A S K VF Q++
Sbjct: 299 EKVCDLLGEMASGGSL--------------PDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 369 KSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVD 428
+G PN TY + + + QSG YD V +LF +++ S P+A TY +L+ F + G
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 429 EAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRAR---PLEVTF 485
E V +M + + Y + G +DA KI + A P +
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA----RKILQYMTANDIVPSSKAY 460
Query: 486 TGMIKSSMDGGHIDDCACIFECMKDHCS-PNIGTINTMLKVYGQ 528
TG+I++ ++ F M + S P+I T +++L + +
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 23/289 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y+ LL + G++ R + Q+F M+ + + PD A Y+ + G+ G KE++ +
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M ++ IEPD+ Y ++ AC + + + + + + P+
Sbjct: 413 MVEEN--------------IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
Y +E Q+ Y+ F + G P T+ L+ +F + G V E+ + +
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRL 518
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIP---EVEKIRRLPRARPLEVTFTGMIKSSMD 494
G+ + G++++A+ ++EK R P R LE + + +
Sbjct: 519 VDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL- 577
Query: 495 GGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+D+C FE MK P+I ML VYG+ +++ L EE+
Sbjct: 578 ---VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 105/274 (38%), Gaps = 25/274 (9%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMR 283
++E+ G G +K+ VV ++ + Y ++ GK ++A +I M
Sbjct: 393 LIEVFGEGGYFKE---VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 449
Query: 284 GNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVI 343
N D+ P AY + GQA L +E L M + P I
Sbjct: 450 AN-DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN--------------PSIET 494
Query: 344 YNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
++++L + K + +L SG+ N T+ +E Q G ++ + + +
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYG--- 460
+S P+ T + ++ + VDE E EM+ ++ + Y + L YG
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMM---LAVYGKTE 611
Query: 461 RWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMD 494
RW D +E++ R + MIK D
Sbjct: 612 RWDDVNELLEEMLS-NRVSNIHQVIGQMIKGDYD 644
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 184/436 (42%), Gaps = 33/436 (7%)
Query: 113 QRVEFLERTRGNGEYGGEKLKRESLNELKEMFQARKMDQLKWVFDDDIEINEHWYNESYG 172
R F R NG GG+ + LK +++ +MD E ++ E
Sbjct: 17 SRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMD---------CEFDQEENGEKIS 67
Query: 173 LLKRTQKRSEVEVIRFLVERLSDREITTKDWKLSRL-MKLSGLPFTEG--QLLRILEMLG 229
+ KR + +++ R L D L L + +SGL E +LR L
Sbjct: 68 VRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGILRTLSFDN 127
Query: 230 LRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVY 289
C K A W ++ R + Y L+ + + K ++ + M D Y
Sbjct: 128 KTRCAKLAYKFFVWCGGQENFR--HTANCYHLLMKIFAECGEYKAMCRLIDEMIK--DGY 183
Query: 290 PDMAA-YHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVL 348
P A ++ + T G+AGL ++++ K KTF ++ K+ YNA+L
Sbjct: 184 PTTACTFNLLICTCGEAGLARDVVEQF----IKSKTFNYRPYKHS----------YNAIL 229
Query: 349 NACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEV 408
++ + KQ+K + WV++Q+ + G P+ TY + M + G D ++ L ++ + G
Sbjct: 230 HSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFS 289
Query: 409 PEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPE 468
P+ TY +L+ K A+ + M + GV + L L G+ +
Sbjct: 290 PDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYF 349
Query: 469 VEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCS-PNIGTINTMLKVYG 527
+++ ++ P V +T MI + GG ++ +F+ M + PN+ T N+M++ +
Sbjct: 350 MDETVKVG-CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFC 408
Query: 528 QNDKFSKAKFLFEEVK 543
KF +A L +E++
Sbjct: 409 MAGKFKEACALLKEME 424
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ Y LL L +P AL + N MR + V P + + ++ L +AG L+
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMR-EVGVEPGVIHFTTLIDGLSRAGKLEA------ 345
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
C +T K + PD+V Y ++ + + + +FK++ + G PN
Sbjct: 346 CKYFMDETVKVGCT--------PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + +G + L ++ G P + Y LV GKV EA E +++
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Query: 437 MEKRG 441
M ++G
Sbjct: 458 MVEKG 462
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+EP ++ + +++ + + + + + K G P+ Y + + + G +
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAE 382
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELA 453
E+F ++ G++P TY ++R F GK EA ++EME RG VY L
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 137/332 (41%), Gaps = 58/332 (17%)
Query: 260 TKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMK 319
T+LL L KA R K+A+++ LM + + PD +AY + L + G + + +VE M+
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSS-GIIPDASAYTYLVNQLCKRGNVGYAMQLVEKME 168
Query: 320 QKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
Y N V YNA++ C+ + + +V ++L + GL PN T
Sbjct: 169 DH------GYPSN--------TVTYNALVRGLCMLGSLNQSLQFV-ERLMQKGLAPNAFT 213
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y +E + D +L +I G P ++Y VL+ F KEG+ D+A+ RE+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDA---IPEVEKIRRLPRA----------------- 478
+G Y L CLC GRW++A + E++ R P
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 479 ----------------RPLEVTFTGMIKSSMDGGHIDDCA-CIFECMKDHCSPNIGTINT 521
R ++ +I G +D C+ E + C PN GT N
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 522 MLKVYGQNDKFSKAKFLFEEV----KVATSDF 549
+ + N K +A ++ + + K T DF
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF 425
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 21/290 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
++ L+ V K + EA +++N M RG + PD Y+S+ G KE
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRG---IAPDTITYNSLI-----DGFCKE-----N 364
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
C+ + + F SK EPDIV Y+ ++N+ +K+ +F+++ GL PN
Sbjct: 365 CLHEANQMFDLMVSKGC----EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + QSG + ELF ++ G P +TY +L+ G++++A+E +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
M+K + +Y + +C + DA + +P VT+ MI G
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD-KGVKPDVVTYNVMIGGLCKKG 539
Query: 497 HIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
+ + +F MK D C+P+ T N +++ + + L EE+KV
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 24/307 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAG-------LLKEL 311
Y+ ++ L K +AL +FN M + D+ Y S+ L G +L+E+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 312 LN------------IVECMKQKPKTFKFK--YSKNWDPIIEPDIVIYNAVLNACVPSKQW 357
+ +++ ++ K + K Y++ I PD + YN++++
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 358 KGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVL 417
+ +F + G +P+ TY + + ++ D LF +I G +P +TY L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 418 VRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPR 477
V F + GK++ A E +EM RGV + Y L LC G A+ EK+++
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 478 ARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAK 536
+ + + +I + +DD +F + D P++ T N M+ + S+A
Sbjct: 487 TLGIGI-YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 537 FLFEEVK 543
LF ++K
Sbjct: 546 MLFRKMK 552
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
PD+V + ++N + + ++ + G +P+ TYG + +SGN L +L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
F ++ + Y +++ + K+G D+A+ EME +G+ Y L LC
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 459 YGRWQDAIPEV-EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNI 516
G+W D + E I R P VTF+ +I + G + + ++ E + +P+
Sbjct: 293 DGKWDDGAKMLREMIGR--NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 517 GTINTMLKVYGQNDKFSKAKFLFE 540
T N+++ + + + +A +F+
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFD 374
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 23/271 (8%)
Query: 266 LGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTF 325
LGK R+ A +I ++ G+ V PD+ Y+ + +AG + L++++ M
Sbjct: 150 LGKTRK---AAKILEILEGSGAV-PDVITYNVMISGYCKAGEINNALSVLDRMS------ 199
Query: 326 KFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEV 385
+ PD+V YN +L + S + K V ++ + P+ TY + +E
Sbjct: 200 -----------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 386 TMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGT 445
T + +L ++R G P+ +TY VLV KEG++DEA++ + +M G
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 446 ASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF 505
+ + +C GRW DA + + R P VTF +I G + I
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLR-KGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 506 ECMKDH-CSPNIGTINTMLKVYGQNDKFSKA 535
E M H C PN + N +L + + K +A
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 127/310 (40%), Gaps = 29/310 (9%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
Y +++ KA AL + + M V PD+ Y++I +L +G LK+ + +++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 317 CMKQK---PKTFKFK------------------YSKNWDPIIEPDIVIYNAVLNACVPSK 355
M Q+ P + + D PD+V YN ++N
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
+ + SG +PN T+ + + +G + +L + R G P +T+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRL 475
+L+ ++G + A++ + +M + G + Y L C + AI +E R +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE--RMV 406
Query: 476 PRA-RPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFS 533
R P VT+ M+ + G ++D I + CSP + T NT++ + K
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 534 KAKFLFEEVK 543
KA L +E++
Sbjct: 467 KAIKLLDEMR 476
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQ----------KPKTFKFKYSKNWDPIIE- 338
P + ++ + L + GLL ++I+E M Q P F K D IE
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 339 ----------PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
PDIV YN +L A + + + QL G P TY ++ +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
+G +L ++R P+ +TY LV +EGKVDEA++ E E+ G+ A
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 449 YYELACCLCYYGRWQDAIP-EVEKIRRLPRARPLEVTFTGMIK 490
+ + LC + AI V I R +P E ++T +I+
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINR--GCKPNETSYTILIE 562
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 111/273 (40%), Gaps = 19/273 (6%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMR 283
IL L G KQA+ V+ + Y YT L+ + A+++ + MR
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQ---RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 284 GNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVI 343
+ PD+ Y+ + + + G L E + + M +P+++
Sbjct: 267 -DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG--------------CQPNVIT 311
Query: 344 YNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
+N +L + + +W + + + G P+ T+ + + + G ++ ++
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQ 463
+ G P +L+Y L+ F KE K+D A+E + M RG Y + LC G+ +
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 464 DAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
DA+ + ++ P+ +T+ +I G
Sbjct: 432 DAVEILNQLSS-KGCSPVLITYNTVIDGLAKAG 463
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 38/250 (15%)
Query: 219 GQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQI 278
G+ + ILE + GC +LS Y LL K ++ A++
Sbjct: 361 GRAIDILEKMPQHGCQPNSLS-------------------YNPLLHGFCKEKKMDRAIEY 401
Query: 279 FNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPI 336
M RG YPD+ Y+++ L + G +++ + I+ + SK P+
Sbjct: 402 LERMVSRG---CYPDIVTYNTMLTALCKDGKVEDAVEILNQLS----------SKGCSPV 448
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+ + YN V++ + + + +++ LKP+ TY + + G D
Sbjct: 449 L----ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ F + R G P A+T+ ++ K + D A++ + M RG + Y L L
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 457 CYYGRWQDAI 466
Y G ++A+
Sbjct: 565 AYEGMAKEAL 574
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 17/286 (5%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
+T L+ R +EA+ + N M + + PD+ Y +I +L + G + L++
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALSL---- 199
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
F +N+ I PD+V+Y +++N S +W+ + + + K +KP+ T
Sbjct: 200 --------FDQMENYG--IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
+ ++ ++ G + EL+ ++ R P TY L+ F EG VDEA + ME
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
+G Y L C + DA+ ++ + +T+T +I+ G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN-TITYTTLIQGFGQVGKP 368
Query: 499 DDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ +F M PNI T N +L N K KA +FE+++
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 28/294 (9%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+YT ++ L K AL +F+ M N + PD+ Y S+ L +G ++ +++
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M ++ I+PD++ +NA+++A V ++ ++ ++ + + PN
Sbjct: 238 MTKRK--------------IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + G D ++F + G P+ + Y L+ F K KVD+A++ EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEK---IRRLPRARPLEV-TFTGMIKSSM 493
++G+ G Y L G Q P V + + R P + T+ ++
Sbjct: 344 SQKGLTGNTITYTTLI-----QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 494 DGGHIDDCACIFECMK----DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
G + IFE M+ D +PNI T N +L N K KA +FE+++
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
PD+V Y +++N K+ +F ++ + GL N TY ++ Q G ++ E+
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTAS---VYYELACC 455
F + G P TY VL+ GKV +A+ +M+KR + G A Y L
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 456 LCYYGRWQDAIPEVEKIRR 474
LCY G+ + A+ E +R+
Sbjct: 435 LCYNGKLEKALMVFEDMRK 453
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 123/296 (41%), Gaps = 19/296 (6%)
Query: 249 DHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLL 308
+ R S +TKLL V+ K ++ F+++ D M H +
Sbjct: 65 ESRPLPSIIDFTKLLNVIAKMKK-------FDVVINLCDHLQIMGVSHDLYTC------- 110
Query: 309 KELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQL 367
LL C +P K EPDIV + +++N C+ ++ + +S V Q+
Sbjct: 111 -NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV-NQM 168
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
+ G+KP+ Y ++ ++G+ + LF Q+ G P+ + Y LV G+
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTG 487
+A +R M KR + + L G++ DA ++ R+ A P T+T
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA-PNIFTYTS 287
Query: 488 MIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+I G +D+ +F M+ C P++ +++ + + K A +F E+
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
YT L+ G+ +P A ++F+ M RG V P++ Y+ + L G +K+ L I E
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRG---VPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M+++ + P+I YN +L+ + + + VF+ ++K +
Sbjct: 412 DMQKREMDG-----------VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + ++ ++G LF + G P +TY ++ ++EG EA R+
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 437 MEKRGV 442
M++ GV
Sbjct: 521 MKEDGV 526
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 17/268 (6%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y ++ L K+++ AL + N M + + PD+ Y+S+ L +G + +V C
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M ++ I PD+ +NA+++ACV + ++++ + L P+
Sbjct: 247 MTKRE--------------IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY L + D E+FG + G P+ +TY +L+ + K KV+ ++ EM
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+RGV+ Y L C G+ A E+ + P +T+ ++ D G
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVA-EEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLK 524
I+ I M K+ +I T N +++
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIR 439
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 253 YQSRFVYTKLLAVLGKARRPKEALQIFN-LMRGNIDVYPDMAAYHSIAVTLGQAGLLKEL 311
Y F + L+ K R EA + + ++R ++D PD+ Y + L L E
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD--PDIVTYSLLIYGLCMYSRLDE- 309
Query: 312 LNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSG 371
+ F F SK PD+V Y+ ++N SK+ + +F ++ + G
Sbjct: 310 ---------AEEMFGFMVSKG----CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
+ N TY + ++ ++G ++ E+F ++ G P +TY VL+ GK+++A+
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRWQDA 465
+ +M+K G+ Y + +C G DA
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 37/242 (15%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+P++VIYN +++ SKQ + +++K G+ P+ TY + SG +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
+ + + P+ T+ L+ KEG+V EA E EM +R + Y L LC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 458 YYGRWQDA------------IPEVEK----IRRLPRARPLE------------------V 483
Y R +A P+V I +++ +E V
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 484 TFTGMIKSSMDGGHIDDCACIFECMKDHCS--PNIGTINTMLKVYGQNDKFSKAKFLFEE 541
T+T +I+ G ++ IF M C PNI T N +L N K KA + +
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMV-FCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 542 VK 543
++
Sbjct: 422 MQ 423
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 4/208 (1%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
EP IV + ++LN + ++F Q+ G KPN Y ++ +S D +
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + G P+ +TY L+ G+ +A + M KR + + L
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 458 YYGRWQDAIPEVEK-IRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPN 515
GR +A E+ IRR P VT++ +I +D+ +F M C P+
Sbjct: 268 KEGRVSEAEEFYEEMIRR--SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ T + ++ Y ++ K LF E+
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMS 353
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Query: 339 PDIVIYNAVLNAC-VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
PD + + +++ + +K + V+ V + +++ G +PN TYG+ + + G+ DL
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + + + + ++ + K VD+A+ +EME +G+ Y L CLC
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
YGRW DA + + + P VTF +I + + G + + + M K P+I
Sbjct: 232 SYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 517 GTINTMLKVYGQNDKFSKAKFLFE 540
T N+++ + +D+ KAK +FE
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFE 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+ + + F+F SK+ PD+ YN ++ SK+ + + +F+++ GL +
Sbjct: 306 LDKAKQMFEFMVSKDC----FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ G+ D ++F Q+ G P+ +TY +L+ GK+++A+E M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+K + +Y + +C G+ D + L +P VT+ MI
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRL 480
Query: 498 IDDCACIFECMK-DHCSPNIGTINTMLKVYGQN-DKFSKAKFLFE 540
+ + + + MK D P+ GT NT+++ + ++ DK + A+ + E
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 126/324 (38%), Gaps = 60/324 (18%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTL---GQAGLLKEL 311
+T L+ L + EA+ + + M RG P++ Y + L G L L
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 312 LNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSG 371
LN +E K IE D+VI+N ++++ + +FK+++ G
Sbjct: 173 LNKMEAAK-----------------IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
++PN TY + G + +L + P +T+ L+ F KEGK EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRW------------QDAIPEVEK----IRRL 475
+ +M KR + Y L C + R +D P+++ I+
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 476 PRARPLE------------------VTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
+++ +E VT+T +I+ G D+ +F+ M D P+I
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 517 GTINTMLKVYGQNDKFSKAKFLFE 540
T + +L N K KA +F+
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFD 419
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 29/196 (14%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT L+ L A ++F M + V PD+ Y + L G L++ L + + M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSW-VFKQLKKSGLKPNG 376
++ I+ DI IY ++ C K G W +F L G+KPN
Sbjct: 422 QKSE--------------IKLDIYIYTTMIEGMCKAGKVDDG--WDLFCSLSLKGVKPNV 465
Query: 377 ATY-----GLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
TY GL + +Q + L +++ G +P++ TY L+R ++G +
Sbjct: 466 VTYNTMISGLCSKRLLQEA-----YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Query: 432 EAIREMEKRGVIGTAS 447
E IREM +G AS
Sbjct: 521 ELIREMRSCRFVGDAS 536
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 17/269 (6%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ Y +++ L K KEA+++ + M D P+ Y+++ TL + ++E +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
+ K I PD+ +N+++ ++ + +F++++ G +P+
Sbjct: 390 VLTSKG--------------ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDE 435
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + ++ G D + Q+ SG +TY L+ F K K EA E E
Sbjct: 436 FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
ME GV + Y L LC R +DA ++++ + +P + T+ ++ GG
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IMEGQKPDKYTYNSLLTHFCRGG 554
Query: 497 HIDDCACIFECMKDH-CSPNIGTINTMLK 524
I A I + M + C P+I T T++
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
PD +N ++N + K + + + G P+ TY + + G E+
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
Q+ P +TY L+ T KE +V+EA E R + +G++ + L LC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 459 YGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIG 517
+ A+ E++R P E T+ +I S G +D+ + + M+ C+ ++
Sbjct: 413 TRNHRVAMELFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 518 TINTMLKVYGQNDKFSKAKFLFEEVKV 544
T NT++ + + +K +A+ +F+E++V
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEV 498
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+PD+ +N ++ A + Q + + + + GL P+ T+ M+ ++ G+ D
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKR-GVIGTASVYYELACC 455
+ Q+ G ++ V+V F KEG+V++A+ I+EM + G + L
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 456 LCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSP 514
LC G + AI E+ + P T+ +I G + + + + M CSP
Sbjct: 305 LCKAGHVKHAI-EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 515 NIGTINTMLKVYGQNDKFSKAKFLFEEVKVATS 547
N T NT++ + ++ +A E +V TS
Sbjct: 364 NTVTYNTLISTLCKENQVEEAT---ELARVLTS 393
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 125/310 (40%), Gaps = 35/310 (11%)
Query: 172 GLLKRTQKRSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLR 231
GL K + +E++ +++ D ++ T + +S L KL + + + +L+ + R
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK----EAVEVLDQMITR 359
Query: 232 GCWKQALSVVQWVY-----NYKDHRKYQSRFVYTK-----------LLAVLGKARRPKEA 275
C ++ + N + +R + +K L+ L R + A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 276 LQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDP 335
+++F MR PD Y+ + +L G L E LN+++ M+
Sbjct: 420 MELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG------------- 465
Query: 336 IIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLV 395
++ YN +++ + + + +F +++ G+ N TY ++ +S +
Sbjct: 466 -CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 396 HELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
+L Q+ G+ P+ TY L+ F + G + +A + ++ M G Y L
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 456 LCYYGRWQDA 465
LC GR + A
Sbjct: 585 LCKAGRVEVA 594
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 37/252 (14%)
Query: 222 LRILEMLGLRGCWKQALSVVQWVYNY----------------KDHRKYQSRFVYTKLLAV 265
L +L+ + L GC + ++ + + + H ++ Y L+
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 266 LGKARRPKEALQIFN--LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPK 323
L K+RR ++A Q+ + +M G PD Y+S+ + G +K+ +IV+ M
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQ---KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG- 570
Query: 324 TFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAM 383
EPDIV Y +++ + + + S + + ++ G+ Y +
Sbjct: 571 -------------CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 384 EVTMQSGNYDLVHELFGQIRRSGEV-PEALTYKVLVRTFWK-EGKVDEAVEAIREMEKRG 441
+ + LF ++ E P+A++Y+++ R G + EAV+ + E+ ++G
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
Query: 442 VIGTASVYYELA 453
+ S Y LA
Sbjct: 678 FVPEFSSLYMLA 689
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 339 PDIVIYNAVLNAC-VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
PD + + +++ + +K + V+ V + +++ G +PN TYG+ + + G+ DL
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + + + + ++ + K VD+A+ +EME +G+ Y L CLC
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
YGRW DA + + + P VTF +I + + G + +++ M K P+I
Sbjct: 307 SYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 517 GTINTMLKVYGQNDKFSKAKFLFE 540
T N+++ + +D+ KAK +FE
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFE 389
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+ + + F+F SK+ PD+V YN ++ SK+ + + +F+++ GL +
Sbjct: 381 LDKAKQMFEFMVSKDC----FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ G+ D ++F Q+ G P+ +TY +L+ GK+++A+E M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+K + +Y + +C G+ D + L +P VT+ MI
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRL 555
Query: 498 IDDCACIFECMK-DHCSPNIGTINTMLKVYGQN-DKFSKAKFLFE 540
+ + + + MK D PN GT NT+++ + ++ DK + A+ + E
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 125/324 (38%), Gaps = 60/324 (18%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTL---GQAGLLKEL 311
+T L+ L + EA+ + + M RG P++ Y + L G L L
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 312 LNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSG 371
LN +E K IE D+VI+N ++++ + +FK+++ G
Sbjct: 248 LNKMEAAK-----------------IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
++PN TY + G + +L + P +T+ L+ F KEGK EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRW------------QDAIPEVEK----IRRL 475
+ +M KR + Y L C + R +D P+V I+
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 476 PRARPLE------------------VTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
+++ +E VT+T +I+ G D+ +F+ M D P+I
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 517 GTINTMLKVYGQNDKFSKAKFLFE 540
T + +L N K KA +F+
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFD 494
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT L+ L A ++F M + V PD+ Y + L G L++ L + + M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSW-VFKQLKKSGLKPNG 376
++ I+ DI IY ++ C K G W +F L G+KPN
Sbjct: 497 QKSE--------------IKLDIYIYTTMIEGMCKAGKVDDG--WDLFCSLSLKGVKPNV 540
Query: 377 ATY-----GLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
TY GL + +Q + L +++ G +P + TY L+R ++G +
Sbjct: 541 VTYNTMISGLCSKRLLQEA-----YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Query: 432 EAIREMEKRGVIGTAS 447
E IREM +G AS
Sbjct: 596 ELIREMRSCRFVGDAS 611
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 45/353 (12%)
Query: 222 LRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQ---SRFVYTKLLAVLGKARRPKEALQI 278
L I + L ++G KQA Y + R++ + + Y L+ +L K+R EA+++
Sbjct: 157 LTIFKSLSVKGGLKQA------PYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV 210
Query: 279 FN--LMRGNIDVYPDMAAYHSIAVTLGQ-------AGLLKELLNIVECMKQKPKTFKF-- 327
+ ++ G P + Y S+ V LG+ GLLKE+ E + KP + F
Sbjct: 211 YRRMILEG---FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM----ETLGLKPNVYTFTI 263
Query: 328 ---------KYSKNW-------DPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSG 371
K ++ + D PD+V Y +++A +++ VF+++K
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
KP+ TY ++ + + D V + + ++ + G VP+ +T+ +LV K G EA
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
+ + M +G++ Y L C L R DA+ + L +P T+ I
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG-VKPTAYTYIVFIDY 442
Query: 492 SMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
G FE MK +PNI N L + + +AK +F +K
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 133/317 (41%), Gaps = 44/317 (13%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLK---ELLNIV 315
+T L+ L KA EA ++MR + P++ Y+++ L + L EL +
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 316 ECMKQKPKTFKF-----KYSKNWDPI-------------IEPDIVIYNAVLNACVPSKQW 357
E + KP + + Y K+ D + I P+IV NA L + + +
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 358 KGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVL 417
+ +F LK GL P+ TY + M+ + G D +L ++ +G P+ + L
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 418 VRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPR 477
+ T +K +VDEA + M++ + T Y L L G+ Q+AI E + +
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ-KG 603
Query: 478 ARPLEVTFTGMIKSSMDGGHIDDCAC-----------IFECMKDHCSPNIGTINTMLKVY 526
P +TF + DC C +F+ M C P++ T NT++
Sbjct: 604 CPPNTITFNTLF----------DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 527 GQNDKFSKAKFLFEEVK 543
+N + +A F ++K
Sbjct: 654 VKNGQVKEAMCFFHQMK 670
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 128/318 (40%), Gaps = 41/318 (12%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV- 315
F Y ++ L K + KEA+ F+ M+ VYPD ++ + +A L+++ I+
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 316 ----ECMKQKPKTF----------------KFKYS---------KNWDPIIEPDIVIYNA 346
C Q F +S ++ D I+ P I+ Y+
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP-IIRYSC 760
Query: 347 VLNACVPSKQWKGVSWVFKQLKKS-GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRS 405
N G +F++ K G++P TY L + +++ ++ ++F Q++ +
Sbjct: 761 KHN------NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 406 GEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA 465
G +P+ TY L+ + K GK+DE E +EM + + L G DA
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 466 IPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLK 524
+ + P T+ +I G + + +FE M D+ C PN N ++
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 525 VYGQNDKFSKAKFLFEEV 542
+G+ + A LF+ +
Sbjct: 935 GFGKAGEADAACALFKRM 952
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 17/271 (6%)
Query: 250 HRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLK 309
H + + +++ L KA +AL ++ + + D P Y + L ++G L
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 310 ELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKK 369
E + E M D P+ IYN ++N + + +FK++ K
Sbjct: 909 EAKQLFEGM--------------LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 370 SGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDE 429
G++P+ TY + ++ G D F +++ SG P+ + Y +++ K +++E
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 430 AVEAIREME-KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGM 488
A+ EM+ RG+ Y L L G ++A +I+R P TF +
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR-AGLEPNVFTFNAL 1073
Query: 489 IKSSMDGGHIDDCACIFECM-KDHCSPNIGT 518
I+ G + +++ M SPN GT
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 263 LAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKP 322
L L KA R +EA QIF ++ +I + PD Y+ + + G + E + ++ M +
Sbjct: 475 LYSLAKAGRDREAKQIFYGLK-DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 323 KTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLA 382
EPD+++ N+++N + + +F ++K+ LKP TY
Sbjct: 534 --------------CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 383 MEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV 442
+ ++G ELF + + G P +T+ L K +V A++ + +M G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 443 IGTASVYYELACCLCYYGRWQDAIPEVEKIRRL--PRARPLEVTFTGMIKSSM 493
+ Y + L G+ ++A+ ++++L P L G++K+S+
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASL 692
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 26/318 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
V L+ L KA R EA ++F M+ + + P + Y+++ LG+ G ++E + + E
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMK-EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 318 MKQK---PKTFKFK------------------YSKNWDPIIEPDIVIYNAVLNACVPSKQ 356
M QK P T F K D PD+ YN ++ V + Q
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQ-IRRSGEVPEALTYK 415
K F Q+KK + P+ T + +++ + +++ + + P L ++
Sbjct: 659 VKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVIGTA-SVYYELACCLCYYGRWQDAIPEVEKIRR 474
L+ + E +D AV + G+ S+ + C + A EK +
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 475 LPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFS 533
+P T+ +I ++ I+ +F +K C P++ T N +L YG++ K
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 534 KAKFLFEEVKVATSDFNA 551
+ L++E+ + N
Sbjct: 838 ELFELYKEMSTHECEANT 855
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y L+ GKA A +F M V PD+ Y + L G + E L+ +
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKE-GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS-GLKPNG 376
+K+ + PD+V YN ++N S + + +F ++K S G+ P+
Sbjct: 987 LKESG--------------LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + +G + +++ +I+R+G P T+ L+R + GK + A +
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Query: 437 MEKRGVIGTASVYYEL 452
M G Y +L
Sbjct: 1093 MVTGGFSPNTGTYEQL 1108
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 118/317 (37%), Gaps = 65/317 (20%)
Query: 245 YNYKDHRKYQSRFVYTKLLAVLG-KARRPKEALQIFNLMRGNI-----DVY--------- 289
Y+ K + +R ++ K LG + + P L I L+ ++ DV+
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
PD+A Y+ + G++G + EL + + M E + + +N V++
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHE--------------CEANTITHNIVIS 863
Query: 350 ACVPSKQWK-GVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEV 408
V + + + + P TYG ++ +SG +LF + G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 409 PEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPE 468
P Y +L+ F K G+ D A + M K GV Y L CLC GR + +
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 469 VEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQ 528
++++ +G+ +P++ N ++ G+
Sbjct: 984 FKELKE-----------SGL------------------------NPDVVCYNLIINGLGK 1008
Query: 529 NDKFSKAKFLFEEVKVA 545
+ + +A LF E+K +
Sbjct: 1009 SHRLEEALVLFNEMKTS 1025
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 150/350 (42%), Gaps = 37/350 (10%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQ-IFNL- 281
+L+ L L L WV N K QS F+ +L LG+AR A +F++
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFL---MLEFLGRARNLNVARNFLFSIE 127
Query: 282 MRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTFKFKYSKN------ 332
R N V ++S+ + G AGL +E + + + MKQ P F +
Sbjct: 128 RRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRG 187
Query: 333 --------WDPI-----IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATY 379
+D + + PD +N ++N + +FK ++ P+ TY
Sbjct: 188 RTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTY 247
Query: 380 GLAMEVTMQSGNYDLVHE-LFGQIRRSGEV-PEALTYKVLVRTFWKEGKVDEAVEAIREM 437
++ ++G + H L G ++++ +V P ++Y LVR + + ++DEAV +M
Sbjct: 248 NTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPE--VEKIRRLPRARPLEVTFTGMIKSSMDG 495
RG+ A Y L L R+ D I + + P TF +IK+ D
Sbjct: 308 LSRGLKPNAVTYNTLIKGLSEAHRY-DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 496 GHIDDCACIFE---CMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
GH+D +F+ MK H P+ + + +++ ++F +A+ LF E+
Sbjct: 367 GHLDAAMKVFQEMLNMKLH--PDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 131/347 (37%), Gaps = 57/347 (16%)
Query: 204 KLSRLMKLSGLP---FTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYT 260
KL + MK G+ T LL IL G G ++ Y + +
Sbjct: 159 KLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT-----PDSYTFN 213
Query: 261 KLLAVLGKARRPKEALQIFNLMRGNIDVY---PDMAAYHSIAVTLGQAGLLKELLNIVEC 317
L+ K EA +IF ++++Y PD+ Y++I L +AG +K N++
Sbjct: 214 TLINGFCKNSMVDEAFRIFK----DMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSG 269
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M +K + P++V Y ++ ++ VF + GLKPN
Sbjct: 270 MLKKATD------------VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 378 TYGLAMEVTMQSGNYDLVHELF--GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TY ++ ++ YD + ++ G + P+A T+ +L++ G +D A++ +
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
EM + ++ Y L LC + A E F + + +
Sbjct: 378 EMLNMKLHPDSASYSVLIRTLCMRNEFDRA----------------ETLFNELFEKEVLL 421
Query: 496 GHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
G KD C P N M + N K +A+ +F ++
Sbjct: 422 G------------KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+P+ V +N +++ + + ++ G +P+ TYG+ + + G+ DL
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + P L Y ++ K +D+A+ +EME +G+ Y L CLC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 458 YYGRWQDAIPEV-EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPN 515
YGRW DA + + I R + P TF+ +I + + G + + ++ E +K P+
Sbjct: 303 NYGRWSDASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFE 540
I T ++++ + +D+ +AK +FE
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFE 385
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 177/472 (37%), Gaps = 92/472 (19%)
Query: 130 EKLKRESLNELK---------EMFQARKMDQLKWVFDDDIEINEHWYNESYGLLKRTQKR 180
EKL R L+ELK EM ++R F IE ++ LL K
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRP-------FPSIIEFSK--------LLSAIAKM 94
Query: 181 SEVEVIRFLVERLSDREITTKDWKLSRLMKL----SGLPFTEGQLLRILEMLG------- 229
++ +V+ L E++ + I + S L+ S LP L ++++ LG
Sbjct: 95 NKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK-LGYEPNIVT 153
Query: 230 ----LRG-CWKQALSVVQWVYNYKDHRKYQSRFV-YTKLLAVLGKARRPKEALQIFNLMR 283
L G C + +S + + YQ V + L+ L + EA+ + + M
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 284 GNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVI 343
PD+ Y + L + G N++ M+Q +EP ++I
Sbjct: 214 AK-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK--------------LEPGVLI 258
Query: 344 YNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
YN +++ K +FK+++ G++PN TY + G + L +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQ 463
P+ T+ L+ F KEGK+ EA + EM KR + + Y L C + R
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 464 DA------------IPEVEKIRRLPRA-------------------RPL---EVTFTGMI 489
+A P+V L + R L VT+ +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 490 KSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
+ G D IF E + D PNI T NT+L +N K KA +FE
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 19/270 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFN-LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
F ++ L+ K + EA ++++ +++ +ID P + Y S+ L E
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSID--PSIVTYSSLINGFCMHDRLDE----- 379
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
+ F+F SK+ PD+V YN ++ K+ + VF+++ + GL N
Sbjct: 380 -----AKQMFEFMVSKHC----FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TY + ++ Q+G+ D+ E+F ++ G P +TY L+ K GK+++A+
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
+++ + T Y + +C G+ +D + L +P V + MI
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRK 549
Query: 496 GHIDDCACIFECMK-DHCSPNIGTINTMLK 524
G ++ +F+ MK D PN G NT+++
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 129/309 (41%), Gaps = 24/309 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+Y ++ L K + +AL +F M + P++ Y S+ L G + ++
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 317 CM---KQKPKTFKF--------------KYSKNWDPI----IEPDIVIYNAVLNACVPSK 355
M K P F F + K +D + I+P IV Y++++N
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
+ +F+ + P+ TY ++ + + E+F ++ + G V +TY
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRL 475
+L++ ++ G D A E +EM GV Y L LC G+ + A+ E ++R
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR- 494
Query: 476 PRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSK 534
+ P T+ MI+ G ++D +F + P++ NTM+ + + +
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 535 AKFLFEEVK 543
A LF+E+K
Sbjct: 555 ADALFKEMK 563
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ L +A A +IF M + V P++ Y+++ L + G L++ + + E +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSW-VFKQLKKSGLKPNG 376
++ +EP I YN ++ C K G W +F L G+KP+
Sbjct: 493 QRSK--------------MEPTIYTYNIMIEGMCKAGKVEDG--WDLFCNLSLKGVKPDV 536
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
Y + + G+ + LF +++ G +P + Y L+R ++G + + E I+E
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 437 MEKRGVIGTAS 447
M G G AS
Sbjct: 597 MRSCGFAGDAS 607
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 129/287 (44%), Gaps = 17/287 (5%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
FV+++LLA ++ Q+ M+ +I V PD Y+ + T G+
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMK-SIGVKPDRQFYNVVIDTFGK----------FN 458
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
C+ TF S+ IEPD V +N +++ + +F+ +++ G P
Sbjct: 459 CLDHAMTTFDRMLSEG----IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + + +D + L G+++ G +P +T+ LV + K G+ ++A+E + E
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
M+ G+ ++++Y L G + A+ ++ +P + +I + +
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF-RVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 497 HIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ + + MK++ P++ T T++K + DKF K ++EE+
Sbjct: 634 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 17/283 (6%)
Query: 262 LLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK 321
+++ L + R EA +F +R + + P AY+++ + G LK+ ++V M+++
Sbjct: 310 IISALADSGRTLEAEALFEELRQS-GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 322 PKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGL 381
+ PD Y+ +++A V + +W+ V K+++ ++PN +
Sbjct: 369 G--------------VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 414
Query: 382 AMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
+ G + ++ +++ G P+ Y V++ TF K +D A+ M G
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 474
Query: 442 VIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDC 501
+ + L C C +GR A E + R P T+ MI S D DD
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER-RGCLPCATTYNIMINSYGDQERWDDM 533
Query: 502 ACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ MK PN+ T T++ VYG++ +F+ A EE+K
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 127/327 (38%), Gaps = 27/327 (8%)
Query: 237 ALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQI----------FNLMRGNI 286
A +VV W+ + Y+ +Y+ L+ LG++ + EA + +N + G
Sbjct: 150 AYAVVSWLQKHNLCFSYE--LLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGAC 207
Query: 287 DVYPDMAAYHSIAVTLGQAGLLKELLN---IVECMKQKPKTFKFKYSKNWDPI----IEP 339
D+ ++ + Q G + +N +++ + + K + + I +E
Sbjct: 208 ARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLEL 267
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D+ + N ++ S + + +GL AT + SG LF
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
++R+SG P Y L++ + K G + +A + EMEKRGV Y L
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 460 GRWQDA---IPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPN 515
GRW+ A + E+E +P F+ ++ D G + + MK P+
Sbjct: 388 GRWESARIVLKEMEA----GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
N ++ +G+ + A F+ +
Sbjct: 444 RQFYNVVIDTFGKFNCLDHAMTTFDRM 470
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
EP++VIYN ++++ Q V K +KK G++P+ TY + SG + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
+ + R G P+ +T+ L+ + KEG++ EA + EM +R V Y L LC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
+G +A +V + P VT+ +I +DD I M +D +
Sbjct: 301 IHGLLDEA-KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 517 GTINTMLKVYGQNDKFSKAK 536
T NT+ + Y Q KFS A+
Sbjct: 360 FTYNTLYQGYCQAGKFSAAE 379
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 118/293 (40%), Gaps = 24/293 (8%)
Query: 269 ARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTF 325
R EA+ + + + G + P++ Y++I +L + G + L++++ MK+ +P
Sbjct: 162 VNRFYEAMSLVDQIVG-LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Query: 326 KFK-------YSKNWDPI-----------IEPDIVIYNAVLNACVPSKQWKGVSWVFKQL 367
+ +S W I PD++ ++A+++ Q + ++
Sbjct: 221 TYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
+ + PN TY + G D ++ + G P A+TY L+ + K +V
Sbjct: 281 IQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRV 340
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTG 487
D+ ++ + M + GV G Y L C G++ A + ++ P TF
Sbjct: 341 DDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG-VHPDMYTFNI 399
Query: 488 MIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLF 539
++ D G I E + K I T N ++K + DK A +LF
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P IV ++ +L A +++ V +F+ L+ G+ + ++ ++ + L
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
G++ + G P +T+ LV F + EA+ + ++ G +Y + LC
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 459 YGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIG 517
G+ A+ ++ ++++ RP VT+ +I G A I + M+ SP++
Sbjct: 197 KGQVNTALDVLKHMKKMG-IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 518 TINTMLKVYGQNDKFSKAKFLFEEV 542
T + ++ VYG+ + +AK + E+
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEM 280
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 133/287 (46%), Gaps = 17/287 (5%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
V ++L+ LG+A+ +AL +F +G P + Y+S+ + L Q G +++ +
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGR-KCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M + F PD + Y+A++++ + +F ++K + ++P
Sbjct: 223 MCNEGDCF-------------PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEK 269
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
Y + + + G + +LF +++R+G P TY L++ K G+VDEA ++M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG-G 496
+ G+ L L GR ++ + V + R P V++ +IK+ +
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEE-LTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 497 HIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
H+ + + F+ MK D SP+ T + ++ Y + ++ KA L EE+
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMR---GNID--VYPDMAAYHSIAVTLGQAGLLKELL 312
Y L+ LGKA+R + A ++F ++ GN+ VY M + G+ G L E +
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKH------FGKCGKLSEAV 499
Query: 313 NIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGL 372
++ MK + PD+ YNA+++ V + + + ++++++G
Sbjct: 500 DLFNEMKNQGSG--------------PDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 373 KPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
+ + ++ + + ++G E+F I+ SG P+ +TY L+ F G +EA
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAAR 605
Query: 433 AIREMEKRGVIGTASVY 449
+REM+ +G A Y
Sbjct: 606 MMREMKDKGFEYDAITY 622
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 133/322 (41%), Gaps = 33/322 (10%)
Query: 257 FVYTKLLAVLGKARRPKEALQIF-NLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
+ YT+L+ LGKA R EA + +++R + PD+ +++ LG+ G ++EL N+
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT--PDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 316 ECM---KQKPKTFKFK-------------------YSKNWDPIIEPDIVIYNAVLNACVP 353
M + P + + K + P Y+ +++
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCK 421
Query: 354 SKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALT 413
+ + + + +++ + G P A Y + ++ Y+ +ELF +++ + +
Sbjct: 422 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV 481
Query: 414 YKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR 473
Y V+++ F K GK+ EAV+ EM+ +G Y L + G +A + K+
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 474 R---LPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQN 529
+ G ++ + I+ +FE +K P+ T NT+L +
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIE----MFETIKHSGIKPDGVTYNTLLGCFAHA 597
Query: 530 DKFSKAKFLFEEVKVATSDFNA 551
F +A + E+K +++A
Sbjct: 598 GMFEEAARMMREMKDKGFEYDA 619
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 18/287 (6%)
Query: 239 SVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSI 298
S ++ KD+ + +YT LL + K + ++AL +F M+ P + Y +
Sbjct: 251 SAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK-RAGCSPTVYTYTEL 309
Query: 299 AVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWK 358
LG+AG + E + M + T PD+V N ++N + +
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLT--------------PDVVFLNNLMNILGKVGRVE 355
Query: 359 GVSWVFKQLKKSGLKPNGATYGLAMEVTMQS-GNYDLVHELFGQIRRSGEVPEALTYKVL 417
++ VF ++ P +Y ++ +S + V F +++ P TY +L
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 418 VRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPR 477
+ + K +V++A+ + EM+++G + Y L L R++ A E+ K +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE-AANELFKELKENF 474
Query: 478 ARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCS-PNIGTINTML 523
+ MIK G + + +F MK+ S P++ N ++
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 255 SRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
S VY ++ GK + EA+ +FN M+ N PD+ AY+++ + +AG++ E ++
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMK-NQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
+ M++ DI +N +LN + + +F+ +K SG+KP
Sbjct: 537 LRKMEENG--------------CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVD 428
+G TY + +G ++ + +++ G +A+TY ++ G VD
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV---GNVD 633
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 162/374 (43%), Gaps = 65/374 (17%)
Query: 175 KRTQKRSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCW 234
+ + +R ++R L+ R+SDRE K L + +K+ + E LG W
Sbjct: 60 RESAERENRVLVRSLMSRISDREPLVK--TLDKYVKVVRC----DHCFLLFEELGKSDKW 113
Query: 235 KQALSVVQWVYNYKDHRKY-QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMA 293
Q L V +W+ + R Y VY+KL++V+GK + + A+ +F+ M+ N PD +
Sbjct: 114 LQCLEVFRWM---QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMK-NSGCRPDAS 169
Query: 294 AYHSIAV----TLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
Y+++ T +A L+++ ++ MK + +P++V YN +L
Sbjct: 170 VYNALITAHLHTRDKAKALEKVRGYLDKMKGIERC-------------QPNVVTYNILLR 216
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
A S + V+ +FK L S + P+ T+ M+ ++G + + ++R + P
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ +T+ VL+ ++ K+ + ++ + + + +
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMR------------------------------ 306
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQ 528
+ +P TF MI + ID +F+ M D + P+ T M+ +YG
Sbjct: 307 ------SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGY 360
Query: 529 NDKFSKAKFLFEEV 542
S+A+ +FEEV
Sbjct: 361 CGSVSRAREIFEEV 374
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 162/374 (43%), Gaps = 65/374 (17%)
Query: 175 KRTQKRSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCW 234
+ + +R ++R L+ R+SDRE K L + +K+ + E LG W
Sbjct: 60 RESAERENRVLVRSLMSRISDREPLVK--TLDKYVKVVRC----DHCFLLFEELGKSDKW 113
Query: 235 KQALSVVQWVYNYKDHRKY-QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMA 293
Q L V +W+ + R Y VY+KL++V+GK + + A+ +F+ M+ N PD +
Sbjct: 114 LQCLEVFRWM---QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMK-NSGCRPDAS 169
Query: 294 AYHSIAV----TLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
Y+++ T +A L+++ ++ MK + +P++V YN +L
Sbjct: 170 VYNALITAHLHTRDKAKALEKVRGYLDKMKGIERC-------------QPNVVTYNILLR 216
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
A S + V+ +FK L S + P+ T+ M+ ++G + + ++R + P
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ +T+ VL+ ++ K+ + ++ + + + +
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMR------------------------------ 306
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQ 528
+ +P TF MI + ID +F+ M D + P+ T M+ +YG
Sbjct: 307 ------SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGY 360
Query: 529 NDKFSKAKFLFEEV 542
S+A+ +FEEV
Sbjct: 361 CGSVSRAREIFEEV 374
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 157/367 (42%), Gaps = 28/367 (7%)
Query: 168 NESYGLLKRTQKRSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEM 227
NE G LK K+ EV+ LV + ++ +T LSR L+ +++
Sbjct: 95 NERNGSLKLLCKK---EVV--LVNSIVEQPLT----GLSRFFDSVKSELLRTDLVSLVKG 145
Query: 228 LGLRGCWKQALSVVQWVYNYKDHRKYQ-SRFVYTKLLAVLGKARRPKEALQIFNLMRGNI 286
L G W++A+ + +W+ + + V + +LG+ + A ++ + +
Sbjct: 146 LDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQ- 204
Query: 287 DVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNA 346
+ D+ AY +I + G ++ +++ E MK+ + P +V YN
Sbjct: 205 EYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPS--------------PTLVTYNV 250
Query: 347 VLNACVP-SKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRS 405
+L+ + W+ + V +++ GLK + T + + G E F +++
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 406 GEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA 465
G P +TY L++ F K G EA+ ++EME+ + Y EL G ++A
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 466 IPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLK 524
+E + + P +T+T +I + G D+ +F MK+ C PN T N +L
Sbjct: 371 AGVIEMMTK-KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 525 VYGQNDK 531
+ G+ +
Sbjct: 430 LLGKKSR 436
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 146/342 (42%), Gaps = 27/342 (7%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMR 283
+L++ G G + +ALSV++ + +++ Y +L+A +A KEA + +M
Sbjct: 322 LLQVFGKAGVYTEALSVLKEM---EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 284 GNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK---PKTFKF--------KYSKN 332
V P+ Y ++ G+AG E L + MK+ P T + K S++
Sbjct: 379 KK-GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 333 WDPI----------IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLA 382
+ I P+ +N +L C K V+ VF+++K G +P+ T+
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 383 MEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV 442
+ + G+ +++G++ R+G TY L+ ++G I +M+ +G
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 443 IGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCA 502
T + Y + C G + I +E + + P + ++ ++ +
Sbjct: 558 KPTETSYSLMLQCYAKGGNYL-GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE 616
Query: 503 CIFECMKDHC-SPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
F K H P++ N+ML ++ +N+ + +A+ + E ++
Sbjct: 617 RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+PD+VI+N++L+ + + + + +++ GL P+ TY M++ ++ G E
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
+ + +S P+ ++Y +++ F + G + EAV + EM +RG+
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI--------------- 732
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
RP T+ + G + + ECM K+ C PN
Sbjct: 733 ---------------------RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNE 771
Query: 517 GTINTMLKVYGQNDKFSKAKFLFEEVKVATSDFN 550
T ++ Y + K+S+A ++K F+
Sbjct: 772 LTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFD 805
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 224 ILEMLGLRG-CWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLM 282
IL++ G G W++ L V+ + + K+ F + +L+ + +EA + F +
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRS--KGLKFD-EFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 283 RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIV 342
+ + P Y+++ G+AG+ E L++++ M++ N P D V
Sbjct: 308 K-SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE-----------NSCP---ADSV 352
Query: 343 IYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
YN ++ A V + K + V + + K G+ PN TY ++ ++G D +LF +
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
+ +G VP TY ++ K+ + +E ++ + +M+ G
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+PD + +++ + + Q+ + G +P+ TYG + + G+ DL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + + + Y ++ K +D+A+ EM+ +G+ Y L CLC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 458 YYGRWQDAIPEV-EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPN 515
YGRW DA + + I R + P VTF+ +I + + G + + ++ E +K P+
Sbjct: 305 NYGRWSDASRLLSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFE 540
I T ++++ + +D+ +AK +FE
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFE 387
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 54/327 (16%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
F +T L+ L + EA+ + + M RG PD+ Y ++ L + G + L++
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRG---CQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
++ M++ IE D+VIYN +++ K +F ++ G++P
Sbjct: 246 LKKMEKGK--------------IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
+ TY + G + L + P +T+ L+ F KEGK+ EA +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 435 REMEKRGVIGTASVYYELACCLCYYGRW------------QDAIPEVEK----IRRLPRA 478
EM KR + Y L C + R +D P V I+ +A
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 479 RPLE------------------VTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTI 519
+ +E VT+T +I D+ +F+ M PNI T
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 520 NTMLKVYGQNDKFSKAKFLFEEVKVAT 546
N +L +N K +KA +FE ++ +T
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRST 498
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 101/240 (42%), Gaps = 16/240 (6%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
F Y+ L+ R EA +F LM D +P++ Y ++ +A ++E + +
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M Q+ + + V Y +++ ++ VFKQ+ G+ PN
Sbjct: 423 EMSQRG--------------LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + ++ ++G +F ++RS P+ TY +++ K GKV++ E
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
+ +GV Y + C G ++A ++K++ P T+ +I++ + G
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE-DGPLPNSGTYNTLIRARLRDG 587
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 122/308 (39%), Gaps = 24/308 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y ++ L K + +AL +F M N + PD+ Y S+ L G + ++
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 318 M---KQKPKTFKFK------------------YSKNWDPIIEPDIVIYNAVLNACVPSKQ 356
M K P F Y + I+PDI Y++++N +
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
+F+ + PN TY ++ ++ + ELF ++ + G V +TY
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP 476
L+ F++ D A ++M GV Y L LC G+ A+ E ++R
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-S 497
Query: 477 RARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKA 535
P T+ MI+ G ++D +F + SPN+ NTM+ + + +A
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 536 KFLFEEVK 543
L +++K
Sbjct: 558 DSLLKKMK 565
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 116/286 (40%), Gaps = 17/286 (5%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
VYT L+ K + A + F M D+ PD+ Y +I Q G
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGD---------- 401
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M + K F + K +EPD V + ++N + K V + ++G PN
Sbjct: 402 MVEAGKLFHEMFCKG----LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ + G+ D +EL ++ + G P TY +V K G ++EAV+ + E
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
E G+ Y L C G D E+ K +P VTF ++ G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGE-MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
++D + M +PN T N+++K Y + A +++++
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 16/253 (6%)
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
++A+Y+ + + Q G +KE +++ M+ K T PD++ Y+ V+N
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT--------------PDVISYSTVVNG 290
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+ V + + +K+ GLKPN YG + + + E F ++ R G +P+
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE 470
+ Y L+ F K G + A + EM R + Y + C G +A
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 471 KIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQN 529
++ P VTFT +I GH+ D + M + CSPN+ T T++ +
Sbjct: 411 EM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 530 DKFSKAKFLFEEV 542
A L E+
Sbjct: 470 GDLDSANELLHEM 482
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 17/288 (5%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y ++ + + R KEA + LM PD+ +Y ++ + G L ++ ++E M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
K+K ++P+ IY +++ + F ++ + G+ P+
Sbjct: 308 KRKG--------------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y ++ + G+ + F ++ P+ LTY ++ F + G + EA + EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
+G+ + + EL C G +DA V P VT+T +I G +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAF-RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 499 DDC-ACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
D + E K PNI T N+++ ++ +A L E + A
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 8/184 (4%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
VF++ + G+ N A+Y + + Q G H L + G P+ ++Y +V +
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVY---YELACCLCYYGRWQDAIPEVEKIRRLPRAR 479
+ G++D+ + I M+++G+ + +Y L C +C ++A E+ + LP
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT- 351
Query: 480 PLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFL 538
V +T +I G I + F E +P++ T ++ + Q +A L
Sbjct: 352 ---VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 539 FEEV 542
F E+
Sbjct: 409 FHEM 412
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 116/286 (40%), Gaps = 17/286 (5%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
VYT L+ K + A + F M D+ PD+ Y +I Q G
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGD---------- 401
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M + K F + K +EPD V + ++N + K V + ++G PN
Sbjct: 402 MVEAGKLFHEMFCKG----LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ + G+ D +EL ++ + G P TY +V K G ++EAV+ + E
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
E G+ Y L C G D E+ K +P VTF ++ G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGE-MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
++D + M +PN T N+++K Y + A +++++
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 16/253 (6%)
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
++A+Y+ + + Q G +KE +++ M+ K T PD++ Y+ V+N
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT--------------PDVISYSTVVNG 290
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+ V + + +K+ GLKPN YG + + + E F ++ R G +P+
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE 470
+ Y L+ F K G + A + EM R + Y + C G +A
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 471 KIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQN 529
++ P VTFT +I GH+ D + M + CSPN+ T T++ +
Sbjct: 411 EM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 530 DKFSKAKFLFEEV 542
A L E+
Sbjct: 470 GDLDSANELLHEM 482
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 17/288 (5%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y ++ + + R KEA + LM PD+ +Y ++ + G L ++ ++E M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
K+K ++P+ IY +++ + F ++ + G+ P+
Sbjct: 308 KRKG--------------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y ++ + G+ + F ++ P+ LTY ++ F + G + EA + EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
+G+ + + EL C G +DA V P VT+T +I G +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAF-RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 499 DDC-ACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
D + E K PNI T N+++ ++ +A L E + A
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 8/184 (4%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
VF++ + G+ N A+Y + + Q G H L + G P+ ++Y +V +
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVY---YELACCLCYYGRWQDAIPEVEKIRRLPRAR 479
+ G++D+ + I M+++G+ + +Y L C +C ++A E+ + LP
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT- 351
Query: 480 PLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFL 538
V +T +I G I + F E +P++ T ++ + Q +A L
Sbjct: 352 ---VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 539 FEEV 542
F E+
Sbjct: 409 FHEM 412
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 25/292 (8%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
+ LL V K + +EA +++ M RG + P++ Y+++ L E N+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRG---ISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
++ M + PDIV + +++ K+ VF+ + K GL
Sbjct: 356 LDLMVRNK--------------CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
N TY + ++ QSG L ELF ++ G +P+ +TY +L+ GK+++A+E
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 435 REMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP--RARPLEVTFTGMIKSS 492
+++K + +Y + +C G+ +DA LP +P +T+T MI
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW---NLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 493 MDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
G + + + M +D +PN T NT+++ + ++ + + L EE+K
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 9/235 (3%)
Query: 312 LNI-VECMKQKPKTFKFKYS---KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQL 367
LNI + C + KT F YS K EPD +N ++ + + ++
Sbjct: 126 LNIMINCFCRCCKTC-FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
++G +P+ TY + +SG+ L +L ++ + TY ++ + ++G +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD-AIPEVEKIRRLPRARPLEVTFT 486
D A+ +EME +G+ + Y L LC G+W D A+ + + R P +TF
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR--EIVPNVITFN 302
Query: 487 GMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
++ + G + + ++ E + SPNI T NT++ Y ++ S+A + +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 118/285 (41%), Gaps = 29/285 (10%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKP-KTFKFKYSKNWDPI------------ 336
PD+ Y+SI + ++G L+++ M+++ K F YS D +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 337 --------IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
I+ +V YN+++ + +W + + K + + PN T+ + ++V ++
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
G +EL+ ++ G P +TY L+ + + ++ EA + M +
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 449 YYELACCLCYYGRWQDAIPEVEKIRRLPRARPL---EVTFTGMIKSSMDGGHIDDCACIF 505
+ L C R D + K+ R R L VT++ +++ G I +F
Sbjct: 371 FTSLIKGYCMVKRVDDGM----KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 506 ECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVATSDF 549
+ M H P++ T +L N K KA +FE+++ + D
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 43/243 (17%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P +V ++ +A +KQ+ V KQL+ +G+ N T + + + + +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV--------------------------- 431
G++ + G P+ T+ L++ + EGKV EAV
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 432 --------EAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEV 483
+ +R+ME+R V Y + LC G AI +++ + V
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET-KGIKSSVV 264
Query: 484 TFTGMIKSSMDGGHIDDCACIFECMKDHCS----PNIGTINTMLKVYGQNDKFSKAKFLF 539
T+ +++ G +D A + +KD S PN+ T N +L V+ + K +A L+
Sbjct: 265 TYNSLVRGLCKAGKWNDGALL---LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 540 EEV 542
+E+
Sbjct: 322 KEM 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y+ L+ ++ + K A ++F M + V PD+ Y + L G L++ L I E +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSH-GVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
QK K ++ IV+Y ++ + + +F L G+KPN T
Sbjct: 465 -QKSK-------------MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y + + + G+ + L ++ G P TY L+R ++G + + + I EM+
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 439 KRGVIGTAS 447
G AS
Sbjct: 571 SCGFSADAS 579
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 23/304 (7%)
Query: 262 LLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE----- 316
+L +L + P+ A +F+ + YH I L + ++ + IVE
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 317 ---CMKQKPKTFKFKYSKNWDPI--------------IEPDIVIYNAVLNACVPSKQWKG 359
C + + Y KN P EP I YN +LNA V +KQW
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 360 VSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVR 419
V +F + +G+ PN TY + ++++ + ++ + + G P+ +Y ++
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
Query: 420 TFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRAR 479
K GK+D+A+E EM +RGV + Y L + A+ +++
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 480 PLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFL 538
P T MI G +DDC I+E MK + ++ T ++++ KA+ +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 539 FEEV 542
F E+
Sbjct: 313 FNEL 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 120/287 (41%), Gaps = 20/287 (6%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
++ L V G + +Q G++DVY AY SI L + L+E N+V+
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVY----AYASIIDCLCKKKRLEEASNLVKE 454
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M + +E + + NA++ + + S+ +++ K+G +P
Sbjct: 455 MSKHG--------------VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
+Y + + ++G + ++ +G P+ TY +L+ ++ K+D A+E +
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+ G+ ++ L LC G+ DA+ + + L VT+ +++ G
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANL-VTYNTLMEGFFKVGD 619
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ I+ M K P+I + NT++K S A F++ +
Sbjct: 620 SNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 129/313 (41%), Gaps = 38/313 (12%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ K + K A+++++ + + VYP++ ++ + L + G + + L I E M
Sbjct: 222 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 281
Query: 319 KQKPKTFK-FKYSKNWDPIIEP--------------------DIVIYNAVLNA-CVPSKQ 356
KQ + + YS + + D+V YN +L C K
Sbjct: 282 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341
Query: 357 WKGVS-WVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
+ + W + K S N +Y + ++ +++G D ++ + G + TY
Sbjct: 342 KESLELWRIMEHKNS---VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRL 475
+ + G V++A+ ++E+E G Y + CLC R ++A V+++ +
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 476 PRARPLEVTFTGMIKSSMDGGHIDDC----ACIF--ECMKDHCSPNIGTINTMLKVYGQN 529
V + +++ GG I D A F E K+ C P + + N ++ +
Sbjct: 459 G------VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 530 DKFSKAKFLFEEV 542
KF +A +E+
Sbjct: 513 GKFGEASAFVKEM 525
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 339 PDIVIYNAVLNAC-VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
PD + + +++ + +K + V+ V + +++ G +PN TYG+ + + G+ DL
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + + Y ++ + K D+A+ EME +GV Y L CLC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 458 YYGRWQDAIPEV-EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPN 515
Y RW DA + + I R + P VTF +I + + G + + ++ E +K P+
Sbjct: 307 NYERWSDASRLLSDMIER--KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFE 540
I T ++++ + +D+ +AK +FE
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFE 389
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 52/284 (18%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y+ ++ L K R +AL +F M N V P++ Y S+ L C
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEME-NKGVRPNVITYSSLISCL--------------C 306
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
++ S + I P++V +NA+++A V + ++ ++ K + P+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + D +F + P +TY L+ F K ++DE VE REM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+RG++G VT+T +I
Sbjct: 427 SQRGLVGNT------------------------------------VTYTTLIHGFFQARD 450
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
D+ +F+ M D PNI T NT+L +N K KA +FE
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 90/217 (41%), Gaps = 15/217 (6%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
F Y+ L+ R EA +F LM D +P++ Y+++ +A + E + +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M Q+ + + V Y +++ ++ VFKQ+ G+ PN
Sbjct: 425 EMSQRG--------------LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY ++ ++G + +F ++RS P TY +++ K GKV++ +
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR 473
+ +GV +Y + C G ++A K+R
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+PD V + +++ + + +++ G +P+ TYG + + G DL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + + + Y ++ + K VD+A+ EM+ +G+ Y L CLC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNI 516
YGRW DA + + + P VTF +I + G + + +F E ++ PNI
Sbjct: 287 NYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 517 GTINTMLKVYGQNDKFSKAKFLF 539
T N+++ + +D+ +A+ +F
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIF 368
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 112/284 (39%), Gaps = 52/284 (18%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y+ ++ L K R +AL +F M N + PD+ Y S+ L G + ++
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M ++ I P++V +N++++A + +F ++ + + PN
Sbjct: 301 MLERK--------------INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + D ++F + +P+ +TY L+ F K KV + +E R+M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+RG++G VT+T +I
Sbjct: 407 SRRGLVGNT------------------------------------VTYTTLIHGFFQASD 430
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
D+ +F+ M D PNI T NT+L +N K KA +FE
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 20/285 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFN-LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+ L+ K + EA ++F+ +++ +ID P++ Y+S+ L E I
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M K PD+V YN ++N +K+ +F+ + + GL N
Sbjct: 371 MVSKD--------------CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + Q+ + D +F Q+ G P +TY L+ K GK+++A+ +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+K + Y ++ +C G+ +D + L +P + + MI G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKKGL 535
Query: 498 IDDCACIFECMK-DHCSPNIGTINTMLKVYGQN-DKFSKAKFLFE 540
++ +F MK D P+ GT NT+++ + ++ DK + A+ + E
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 26/263 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ R EA QIF LM D PD+ Y+++ +A + + + + M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSK-DCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 319 KQKPKT-------------FKFKYSKNWDPI--------IEPDIVIYNAVLNACVPSKQW 357
++ F+ N + + P+I+ YN +L+ + +
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 358 KGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVL 417
+ VF+ L+KS ++P+ TY + E ++G + +LF + G P+ + Y +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 418 VRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPR 477
+ F K+G +EA +M++ G + + Y L + + R D E I+ +
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL---IRAHLRDGDKAASAELIKEMRS 583
Query: 478 AR-PLEVTFTGMIKSSMDGGHID 499
R + + G++ + G +D
Sbjct: 584 CRFAGDASTYGLVTDMLHDGRLD 606
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 150/328 (45%), Gaps = 33/328 (10%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQ-SRFVYTKLLAVLGKARRPKEALQIFNLM 282
++ +L W+++L+++ WV+ + KY S F Y +L + +A++ A +F+ M
Sbjct: 125 MVSLLSRENDWQRSLALLDWVH---EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEM 181
Query: 283 RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIV 342
R + PD Y ++ + G+ G+ L+ ++ M+Q + D+V
Sbjct: 182 RQRA-LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDR--------------VSGDLV 226
Query: 343 IYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
+Y+ ++ + +F +LK+SG+ P+ Y + V ++ + L ++
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC---LCYY 459
+G +P ++Y L+ + + K EA+ EM++ + +L C + Y
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE------VNCALDLTTCNIMIDVY 340
Query: 460 GRWQDAIPEVEKIRRLPRARPLE---VTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPN 515
G+ D + E +++ R +E V++ +++ + + +F M + N
Sbjct: 341 GQL-DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQN 399
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ T NTM+K+YG+ + KA L +E++
Sbjct: 400 VVTYNTMIKIYGKTMEHEKATNLVQEMQ 427
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 135/319 (42%), Gaps = 52/319 (16%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y+ LL+V + + EAL +F M+ ++ D+ + + GQ ++KE + +
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMK-EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
++ IEP++V YN +L ++ + +F+ +++ ++ N T
Sbjct: 357 RKMD--------------IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVT 402
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y +++ ++ ++ L +++ G P A+TY ++ + K GK+D A +++
Sbjct: 403 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLR 462
Query: 439 KRGV------IGTASVYYELACCLCYYGR------WQDAIPEVEKIRRLPRA-RPLEVTF 485
GV T V YE + + R D IP I L +A R E T+
Sbjct: 463 SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATW 522
Query: 486 TGMIKSSMDGGHIDDCACIFECMKDHCS---------------------PNIGTINTMLK 524
+ + + + G + D + +F CM + S P+ I +L
Sbjct: 523 --VFRQAFESGEVKDIS-VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLN 579
Query: 525 VYGQNDKFSKAKFLFEEVK 543
YG+ +F KA ++ E++
Sbjct: 580 AYGKQREFEKADTVYREMQ 598
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y+ ++++ GKA + A +F +R + V D Y ++ V + GL+ ++
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSS-GVEIDQVLYQTMIVAYERVGLMGHAKRLLHE 495
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+K PD + + + + + +WVF+Q +SG + +
Sbjct: 496 LKL------------------PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS 537
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
+G + + ++ Y V E+F ++R +G P++ +++ + K+ + ++A REM
Sbjct: 538 VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
Query: 438 EKRGVIGTASVYYEL 452
++ G + V++++
Sbjct: 598 QEEGCVFPDEVHFQM 612
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 22/258 (8%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
PD+ AY++I +L + + + + + +++K I P++V Y A++N
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG--------------IRPNVVTYTALVN 233
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
S +W + + + K + PN TY ++ +++G ELF ++ R P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ +TY L+ ++DEA + M +G + Y L C R +D +
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM--- 350
Query: 470 EKIRRLPRARPL---EVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKV 525
K+ R R L VT+ +I+ G +D F M SP+I T N +L
Sbjct: 351 -KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 526 YGQNDKFSKAKFLFEEVK 543
N + KA +FE+++
Sbjct: 410 LCDNGELEKALVIFEDMQ 427
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 24/269 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFN-LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y+ LL K + EA ++F ++R +ID PD+ Y S L L + +
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSID--PDIVTYSS----------LINGLCLHDR 310
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+ + + F SK D+V YN ++N +K+ + +F+++ + GL N
Sbjct: 311 IDEANQMFDLMVSKGC----LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ Q+G+ D E F Q+ G P+ TY +L+ G++++A+ +M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+KR + Y + +C G+ ++A + L +P VT+T M+ G
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 498 IDDCACIFE------CMKDHCSPNIGTIN 520
+ + ++ MK+ C+ + G I
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLSDGDIT 514
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 338 EPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
EPD V +++N C ++ VS V K ++ G KP+ Y ++ ++ +
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ F +I R G P +TY LV + +A + +M K+ + Y L
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPN 515
G+ +A E++ R+ P VT++ +I ID+ +F+ M C +
Sbjct: 271 VKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ + NT++ + + + LF E+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREM 356
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 146/349 (41%), Gaps = 36/349 (10%)
Query: 232 GCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPD 291
G K+A +V+ + K Y L+ L A +E L++ + M+ ++ + PD
Sbjct: 289 GSLKEAFQIVELM---KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK-SLKLQPD 344
Query: 292 MAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTFKFKYSKNW--------------D 334
+ Y+++ + GL E ++E M+ K S W
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 335 PIIE-----PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQS 389
+++ PDIV Y+ ++ A + G + +++ + G+K N T ++ +
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 390 GNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVY 449
D H L + G + + +TY L+ F++E KV++A+E EM+K + T S +
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 450 YELACCLCYYGRWQDAIPEVEKIRRLPRA--RPLEVTFTGMIKSSMDGGHIDDCACIF-E 506
L LC++G+ + A+ EK L + P + TF +I G ++ + E
Sbjct: 525 NSLIGGLCHHGKTELAM---EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 507 CMKDHCSPNIGTINTMLKVYGQNDKFSKA----KFLFEEVKVATSDFNA 551
+K P+ T N +L + KA L EE +V T +N
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNT 630
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 106/232 (45%), Gaps = 24/232 (10%)
Query: 271 RPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYS 330
+P ALQIF M + + P++ +++ + GL++ P +F +
Sbjct: 146 KPHVALQIFQKMI-RLKLKPNLLTCNTLLI-----GLVR-----------YPSSFSISSA 188
Query: 331 KN-WDPIIEPDIVI----YNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAME 384
+ +D +++ + + +N ++N C+ K + + + + + + P+ TY ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 385 VTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIG 444
+ G + EL ++++G VP +TY LV + K G + EA + + M++ V+
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 445 TASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
Y L LC G ++ + ++ ++ L + +P VT+ +I + G
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSL-KLQPDVVTYNTLIDGCFELG 359
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 136/327 (41%), Gaps = 54/327 (16%)
Query: 251 RKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKE 310
R + S ++KLL+ + K + + + M+ N+ + ++ Y + + L
Sbjct: 76 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSILINCFCRRSQLSL 134
Query: 311 LLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSWV------ 363
L ++ K K Y EPDIV N++LN C ++ VS V
Sbjct: 135 ALAVL------AKMMKLGY--------EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 364 ----------------FKQLKKS------------GLKPNGATYGLAMEVTMQSGNYDLV 395
F+ + S G +P+ TYG+ + + G+ DL
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 396 HELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
L ++ + P + Y ++ V++A+ EM+ +G+ Y L C
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 456 LCYYGRWQDAIPEV-EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCS 513
LC YGRW DA + + I R + P VTF+ +I + + G + + ++ E +K
Sbjct: 301 LCNYGRWSDASRLLSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 514 PNIGTINTMLKVYGQNDKFSKAKFLFE 540
P+I T ++++ + +D+ +AK +FE
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFE 385
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 123/321 (38%), Gaps = 54/321 (16%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
F + L+ L + R EA+ + + M +G PD+ Y + L + G + L++
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKG---CQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
++ M+Q IEP +VIYN +++A K +F ++ G++P
Sbjct: 244 LKKMEQGK--------------IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
N TY + G + L + P +T+ L+ F KEGK+ EA +
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 435 REMEKRGVIGTASVYYELACCLCYYGRW------------QDAIPEVEK----IRRLPRA 478
EM KR + Y L C + R +D P V I+ +A
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 479 RPLE------------------VTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTI 519
+ ++ VT+T +I D+ +F+ M D P+I T
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 520 NTMLKVYGQNDKFSKAKFLFE 540
+ +L N K A +FE
Sbjct: 470 SILLDGLCNNGKVETALVVFE 490
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 32/312 (10%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y ++ L + +AL +F M N + P++ Y+S+ L G + ++
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 318 M---KQKPKTFKFK------------------YSKNWDPIIEPDIVIYNAVLNACVPSKQ 356
M K P F Y + I+PDI Y++++N +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
+F+ + PN TY ++ ++ D ELF ++ + G V +TY
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP 476
L+ F++ + D A ++M GV+ Y L LC G+ + A+ E ++R
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR-S 495
Query: 477 RARPLEVTFTGMIKSSMDGGHIDD-----CACIFECMKDHCSPNIGTINTMLKVYGQNDK 531
+ P T+ MI+ G ++D C+ + +K PN+ T TM+ + +
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK----PNVVTYTTMMSGFCRKGL 551
Query: 532 FSKAKFLFEEVK 543
+A LF E+K
Sbjct: 552 KEEADALFREMK 563
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 26/265 (9%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
F Y+ L+ R EA +F LM D +P++ Y+++ +A + E + +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 317 CMKQKPKT-------------FKFKYSKNWDPIIE--------PDIVIYNAVLNACVPSK 355
M Q+ F+ + N + + PDI+ Y+ +L+ +
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
+ + VF+ L++S ++P+ TY + +E ++G + +LF + G P +TY
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRL 475
++ F ++G +EA REM++ G + + Y L + + R D E IR +
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL---IRAHLRDGDKAASAELIREM 597
Query: 476 PRARPL-EVTFTGMIKSSMDGGHID 499
R + + + G++ + + G +D
Sbjct: 598 RSCRFVGDASTIGLVTNMLHDGRLD 622
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 52/287 (18%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT LL G++R+P +A ++F +MR P++ Y+++ G G L E + I M
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKE-RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+Q I+P++V +L AC SK+ V V + G+ N A
Sbjct: 452 EQDG--------------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y A+ + + + L+ +R+ +++T+ +L+ + K EA+ ++EME
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
+ T VY + LC Y + G +
Sbjct: 558 DLSIPLTKEVY---SSVLCAYSK---------------------------------QGQV 581
Query: 499 DDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
+ IF MK C P++ +ML Y ++K+ KA LF E++
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMR 283
++ G G W++AL V + D+ + +L+ R+ +AL F LM+
Sbjct: 219 LINACGSSGNWREALEVCK---KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 275
Query: 284 GNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK-----PKTFKFK-----YS--- 330
G V PD ++ I L + G + L++ M++K P F YS
Sbjct: 276 G-AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 331 --KNWDPIIE--------PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYG 380
+N + E P+IV YNA++ A V +K++G+ P+ +Y
Sbjct: 335 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Query: 381 LAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKR 440
+ +S E+F +R+ P +TY L+ + G + EAVE R+ME+
Sbjct: 395 CLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 454
Query: 441 GV-IGTASVYYELACC 455
G+ SV LA C
Sbjct: 455 GIKPNVVSVCTLLAAC 470
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 140/362 (38%), Gaps = 72/362 (19%)
Query: 201 KDWKLS----RLMKLSGLPFTEGQLLR------------ILEMLGLRGCWKQALSVVQWV 244
KDW +S RLM L+ +G L ++ L RGC + ++V +W+
Sbjct: 74 KDWSVSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWM 133
Query: 245 YNYKDHRKYQSRF-VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLG 303
K + Y +R +Y ++ + + +A +F M+ PD Y ++ G
Sbjct: 134 ---KIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQ-KWSCKPDAETYDALINAHG 189
Query: 304 QAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWV 363
+AG + +N+++ M + I P YN ++NAC S W+ V
Sbjct: 190 RAGQWRWAMNLMDDMLRAA--------------IAPSRSTYNNLINACGSSGNWREALEV 235
Query: 364 FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWK 423
K++ +G+ P+ T+ + + Y F ++ + P+ T+ +++ K
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 424 EGKVDEAVEAIREM-EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLE 482
G+ +A++ M EKR RP
Sbjct: 296 LGQSSQALDLFNSMREKRA-----------------------------------ECRPDV 320
Query: 483 VTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEE 541
VTFT ++ G I++C +FE M + PNI + N ++ Y + A + +
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 380
Query: 542 VK 543
+K
Sbjct: 381 IK 382
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 22/259 (8%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
P++ Y ++ T Q + + +++ MK++ I PDI YN+++
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG--------------IAPDIFCYNSLII 495
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
+K+ ++ ++GLKPN TYG + +++ + + ++R G +P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ L+ + K+GKV EA A R M +G++G A Y L L D + +
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL----FKNDKVDDA 611
Query: 470 EKIRRLPRAR---PLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKV 525
E+I R R + P ++ +I G++ + IF E +++ +PN+ N +L
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 526 YGQNDKFSKAKFLFEEVKV 544
+ ++ + KAK L +E+ V
Sbjct: 672 FCRSGEIEKAKELLDEMSV 690
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I PD+ Y ++N + S +F ++ + GL PN Y + + +SG +
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL--AC 454
EL ++ G P A+TY ++ + K G + EA EM+ +G++ + VY L C
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 455 C 455
C
Sbjct: 743 C 743
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 1/208 (0%)
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
C K K Y D I D Y ++N + + +F++++ G+ P+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
+YG+ + + GN +F ++ G P + Y +L+ F + G++++A E + E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
M +G+ A Y + C G +A +++ +L P +T ++
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGLVPDSFVYTTLVDGCCRLN 746
Query: 497 HIDDCACIFECMKDHCSPNIGTINTMLK 524
++ IF K C+ + N ++
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALIN 774
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 344 YNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
Y+ +++ + + + ++ G+ Y + V + G + LF +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQ 463
SG +P+A Y L+ + +E V + E + EM+KR ++ + Y + +C G
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 464 DAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTM 522
A V+++ RP V +T +IK+ + D + + MK+ +P+I N++
Sbjct: 435 GAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 523 LKVYGQNDKFSKAK-FLFEEVK 543
+ + + +A+ FL E V+
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVE 515
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 21/286 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+ L+ L R EA + N M G ++ D+ Y +I + + G K LN++
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M++ I+PD+VIY+A+++ ++F ++ + G+ PN
Sbjct: 287 MEETH--------------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ G + L + P+ LT+ L+ KEGK+ EA + EM
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
R + Y + C + R+ DA + + A P VTF +I
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKR 447
Query: 498 IDDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+D+ + E + N T NT++ + + D + A+ LF+E+
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
+D + PD+V +N +++ +K+ + +++ + GL N TY + + N
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
+ +LF ++ G P+ +T +L+ F + K++EA+E + E+ + I +V Y +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNI 542
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHC 512
G D ++ + P T+ MI I D +F MKD+
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 513 -SPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
P+ T NT+++ + + K+ L E++
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+ D V YN +++ + +F L G++P+ TY + + +
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTA 446
LF +++ +G P+ TY L+R K G++D+++E I EM G G A
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 135/330 (40%), Gaps = 28/330 (8%)
Query: 234 WKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMA 293
W++AL V +W+ N + +R V +L VLG+ + A++IF R V +
Sbjct: 171 WQRALEVFEWL-NLRHWHSPNARMV-AAILGVLGRWNQESLAVEIFT--RAEPTVGDRVQ 226
Query: 294 AYHSIAVTLGQAGLLKELLNIVECMKQK---PKTFKFKYSKNW----------------- 333
Y+++ ++G + +V+ M+Q+ P F N
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 334 ---DPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG 390
+ + PD + YN +L+AC G VF+ ++ +P+ TY + V + G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 391 NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYY 450
LF ++ G P+A+TY L+ F +E ++ E ++M+K G Y
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 451 ELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD 510
+ G+ A+ + ++ L P +T+T +I S + A + M D
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 511 -HCSPNIGTINTMLKVYGQNDKFSKAKFLF 539
P + T + ++ Y + K +A+ F
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 30/253 (11%)
Query: 203 WKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRK-------YQ- 254
W + ++ + G + R+ L L+G + A++ +Y + R YQ
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 255 --------SRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAG 306
Y ++ + GK + ALQ++ M+G PD Y + +LG+A
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 307 LLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQ 366
E ++ S+ D I+P + Y+A++ + + + F
Sbjct: 453 RTVEAAALM--------------SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSC 498
Query: 367 LKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGK 426
+ +SG KP+ Y + ++V ++ L+ + G P Y++++ KE +
Sbjct: 499 MLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENR 558
Query: 427 VDEAVEAIREMEK 439
D+ + IR+ME+
Sbjct: 559 SDDIQKTIRDMEE 571
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 39/169 (23%)
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV--DEAVEAIRE 436
Y M V +SG + EL +R+ G VP+ +++ L+ K G + + AVE +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
+ G+ RP +T+ ++ +
Sbjct: 288 VRNSGL------------------------------------RPDAITYNTLLSACSRDS 311
Query: 497 HIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
++D +FE M+ H C P++ T N M+ VYG+ ++A+ LF E+++
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 343 IYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
+Y ++ A K W+ V L++SG P+ T+ M Q G Y+ +F +
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV-IGTASVYYELACCLCYYGR 461
R G P + +L+ +G+++E + E++ G I +S+ L + R
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDA----FAR 869
Query: 462 WQDAIPEVEKIRRLPRAR---PLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIG 517
+ I EV+KI +A P + MI+ G + D + M++ + +
Sbjct: 870 AGN-IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELA 928
Query: 518 TINTMLKVYGQNDKFSKAKFLFEEVK 543
N+MLK+Y + + K +++ +K
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIK 954
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 125/291 (42%), Gaps = 27/291 (9%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+YT ++ GK + ++A + +R + PD+ ++S+ Q G C
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRT-PDLKTWNSLMSAYAQCG----------C 802
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
++ F P +E N +L+A + + + V ++L+ G K + +
Sbjct: 803 YERARAIFNTMMRDGPSPTVES----INILLHALCVDGRLEELYVVVEELQDMGFKISKS 858
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
+ L ++ ++GN V +++ ++ +G +P Y++++ K +V +A + EM
Sbjct: 859 SILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM 918
Query: 438 EKRGVIGTASVYYELA---CCLCYYGRWQDAIPEVEKIRRLPRA--RPLEVTFTGMIKSS 492
E+ A+ ELA L Y +D V+ +R+ P E T+ +I
Sbjct: 919 EE------ANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 493 MDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
++ + + M++ P + T +++ +G+ +A+ LFEE+
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 33/309 (10%)
Query: 241 VQWVYN-YKDHRK---YQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYH 296
+Q +Y Y+D ++ + F Y LL L K + A ++ M N PD +Y
Sbjct: 162 IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-SNKGCCPDAVSYT 220
Query: 297 SIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQ 356
++ ++ + GL+KE + E +F EP + +YNA++N
Sbjct: 221 TVISSMCEVGLVKEGRELAE---------RF----------EPVVSVYNALINGLCKEHD 261
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
+KG + +++ + G+ PN +Y + V SG +L Q+ + G P T
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 417 LVRTFWKEGKVDEAVEAIREMEKR-GVIGTASVYYELACCLCYYGRWQDAI---PEVEKI 472
LV+ + G +A++ +M + G+ Y L C +G A+ +E+I
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 473 RRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDK 531
P R T+ +I G +D I+ M C PN+ M++ ++ K
Sbjct: 382 GCSPNIR----TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 532 FSKAKFLFE 540
F +A+ L E
Sbjct: 438 FKEAESLIE 446
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 137/336 (40%), Gaps = 34/336 (10%)
Query: 223 RILEMLGLRGCWKQALSVVQWVYNY------KDHRKYQSRF-----VYTKLLAVLGKARR 271
++L + +GC A+S + + K+ R+ RF VY L+ L K
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHD 261
Query: 272 PKEALQIFNLMRGNID--VYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKY 329
K A F LMR ++ + P++ +Y ++ L +G ++ + + M ++
Sbjct: 262 YKGA---FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG------- 311
Query: 330 SKNWDPIIEPDIVIYNAVLNAC-VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
P+I ++++ C + + + + ++ GL+PN Y ++
Sbjct: 312 -------CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
GN +F + G P TY L+ F K G +D AV +M G V
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 449 YYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
Y + LC + ++++A +E + + P TF IK D G +D +F M
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSK-ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 509 KDH--CSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ C PNI T N +L + ++ +A L E+
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+P + IYN VL+ + + + + V++ +K+ G +PN TY + ++ ++ D +
Sbjct: 143 DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKK 202
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ G P+A++Y ++ + + G V E E E SVY L LC
Sbjct: 203 LLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEP-----VVSVYNALINGLC 257
Query: 458 ----YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDC-ACIFECMKDHC 512
Y G ++ VEK P ++++ +I + G I+ + + + +K C
Sbjct: 258 KEHDYKGAFELMREMVEK-----GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 513 SPNIGTINTMLK 524
PNI T+++++K
Sbjct: 313 HPNIYTLSSLVK 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 14/186 (7%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
+F ++K+ G P+ Y ++ + +++ ++ ++R G P TY VL++
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLE 482
K KVD A + + EM +G A Y + +C G ++ E+ P
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE--PVVSVYN 250
Query: 483 VTFTGMIKSSMDGGHIDDCACIFECMKDHC----SPNIGTINTMLKVYGQNDKFSKA-KF 537
G+ K G FE M++ SPN+ + +T++ V + + A F
Sbjct: 251 ALINGLCKEHDYKGA-------FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 538 LFEEVK 543
L + +K
Sbjct: 304 LTQMLK 309
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 52/287 (18%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT LL G++R+P +A ++F +MR P++ Y+++ G G L E + I M
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKE-RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+Q I+P++V +L AC SK+ V V + G+ N A
Sbjct: 320 EQDG--------------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y A+ + + + L+ +R+ +++T+ +L+ + K EA+ ++EME
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
+ T VY + LC Y + G +
Sbjct: 426 DLSIPLTKEVYSSV---LCAYSKQ---------------------------------GQV 449
Query: 499 DDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
+ IF MK C P++ +ML Y ++K+ KA LF E++
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMR 283
++ G G W++AL V + D+ + +L+ R+ +AL F LM+
Sbjct: 87 LINACGSSGNWREALEVCK---KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 143
Query: 284 GNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK-----PKTFKFK-----YS--- 330
G V PD ++ I L + G + L++ M++K P F YS
Sbjct: 144 G-AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 202
Query: 331 --KNWDPIIE--------PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYG 380
+N + E P+IV YNA++ A V +K++G+ P+ +Y
Sbjct: 203 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 262
Query: 381 LAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKR 440
+ +S E+F +R+ P +TY L+ + G + EAVE R+ME+
Sbjct: 263 CLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 322
Query: 441 GV-IGTASVYYELACC 455
G+ SV LA C
Sbjct: 323 GIKPNVVSVCTLLAAC 338
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+PD Y+A++NA + QW+ + + ++ + P+ +TY + SGN+ E
Sbjct: 43 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 102
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
+ ++ +G P+ +T+ +++ + + +A+ M+ V + + + CL
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 162
Query: 458 YYGRWQDAIPEVEKIR-RLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPN 515
G+ A+ +R + RP VTFT ++ G I++C +FE M + PN
Sbjct: 163 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 222
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEVK 543
I + N ++ Y + A + ++K
Sbjct: 223 IVSYNALMGAYAVHGMSGTALSVLGDIK 250
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 4/205 (1%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+PD V + +++ + + ++ + G +P+ TYG + + G+ DL
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + + Y ++ + K D+A+ EME +GV Y L CLC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 458 YYGRWQDAIPEV-EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPN 515
YGRW DA + + I R + P VTF+ +I + + G + ++E M K PN
Sbjct: 300 NYGRWSDASRLLSDMIER--KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFE 540
I T ++++ + D+ +AK + E
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLE 382
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 116/290 (40%), Gaps = 52/290 (17%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y+ ++ L K R +AL +F M N V P++ Y S+ L G + ++
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEME-NKGVRPNVITYSSLISCLCNYGRWSDASRLLSD 313
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M ++ I P++V ++A+++A V + +++++ K + PN
Sbjct: 314 MIERK--------------INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + ++ + R +P +TY L+ F K +VD+ +E REM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+RG++G VT+T +I
Sbjct: 420 SQRGLVGNT------------------------------------VTYTTLIHGFFQARD 443
Query: 498 IDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVAT 546
D+ +F+ M PNI T N +L +N K +KA +FE ++ +T
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P++V YN ++N +K+ +F+++ + GL N TY + Q+ + D +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
F Q+ G P LTY +L+ K GK+ +A+ +++ + Y + +C
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 459 YGRWQ 463
G+W+
Sbjct: 511 AGKWK 515
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 125/278 (44%), Gaps = 20/278 (7%)
Query: 267 GKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFK 326
A +P +A+++F M + + D+A++++I L ++ +++ + ++ +
Sbjct: 137 ASAGKPDKAVKLFLNMHEH-GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR----- 190
Query: 327 FKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEV 385
D V YN +LN C+ + K + V K++ + G+ PN TY ++
Sbjct: 191 ----------FSVDTVTYNVILNGWCLIKRTPKALE-VLKEMVERGINPNLTTYNTMLKG 239
Query: 386 TMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGT 445
++G E F ++++ + +TY +V F G++ A EM + GV+ +
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 446 ASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF 505
+ Y + LC ++A+ E++ R P T+ +I+ G +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRG-YEPNVTTYNVLIRGLFHAGEFSRGEELM 358
Query: 506 ECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ M++ C PN T N M++ Y + + KA LFE++
Sbjct: 359 QRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 85/209 (40%), Gaps = 15/209 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y +L +A + + A + F M+ D D+ Y ++ G AG +K N+ +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKR-DCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M ++ + P + YNA++ + +F+++ + G +PN
Sbjct: 291 MIREG--------------VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT 336
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + + +G + EL ++ G P TY +++R + + +V++A+ +M
Sbjct: 337 TYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAI 466
+ Y L + R +D +
Sbjct: 397 GSGDCLPNLDTYNILISGMFVRKRSEDMV 425
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 111/253 (43%), Gaps = 18/253 (7%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
PD + ++ L G + E L +V+ M + +P ++ NA++N
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH--------------KPTLITLNALVN 185
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
+ + + ++ ++G +PN TYG ++V +SG L EL ++
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+A+ Y +++ K+G +D A EME +G +Y L CY GRW D +
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 470 -EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYG 527
+ I+R + P V F+ +I + G + + + E ++ SP+ T +++ +
Sbjct: 306 RDMIKR--KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 528 QNDKFSKAKFLFE 540
+ ++ KA + +
Sbjct: 364 KENQLDKANHMLD 376
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 32/307 (10%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y +L V+ K+ + A+++ M + D Y I L + G L N+
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEER-KIKLDAVKYSIIIDGLCKDGSLDNAFNLFN-- 271
Query: 319 KQKPKTFK------------FKYSKNWDP-----------IIEPDIVIYNAVLNACVPSK 355
+ + K FK F Y+ WD I PD+V ++A+++ V
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
+ + + K++ + G+ P+ TY ++ + D + + + G P T+
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV--EKIR 473
+L+ + K +D+ +E R+M RGV+ Y L C G+ + A E+ E +
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA-KELFQEMVS 450
Query: 474 RLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKF 532
R R RP V++ ++ D G + IFE + K +IG N ++ K
Sbjct: 451 R--RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 533 SKAKFLF 539
A LF
Sbjct: 509 DDAWDLF 515
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 138/350 (39%), Gaps = 57/350 (16%)
Query: 233 CWKQALSVVQWVYNYKDHRKYQSRFV-YTKLLAVLGKARRPKEALQIFNLMRGNID--VY 289
C +L ++N + + +++ + YT L+ A R + + L+R I +
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK---LLRDMIKRKIT 314
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
PD+ A+ ++ + G L+E + + M Q+ I PD V Y ++++
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRG--------------ISPDTVTYTSLID 360
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
Q + + + G PN T+ + + ++ D ELF ++ G V
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ +TY L++ F + GK++ A E +EM R V Y L LC G + A+
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 470 EKIRR----------------------------------LPRARPLEVTFTGMIKSSMDG 495
EKI + L +P T+ MI
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Query: 496 GHIDDCACIFECMK-DHCSPNIGTINTMLKVY-GQNDKFSKAKFLFEEVK 543
G + + +F M+ D SPN T N +++ + G+ D AK L EE+K
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK-LIEEIK 589
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P ++ ++ + + +KQ+ V + KQ++ G+ N T + + + L
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
G+I + G P+ +T+ L+ EG+V EA+E + M + G T L LC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 459 YGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
G+ DA+ ++++ +P EVT+ ++K G
Sbjct: 190 NGKVSDAVLLIDRMVE-TGFQPNEVTYGPVLKVMCKSGQ 227
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 18/182 (9%)
Query: 266 LGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTF 325
LGK KE Q R V PD+ +Y + L G ++ L I E
Sbjct: 435 LGKLEVAKELFQEMVSRR----VRPDIVSYKILLDGLCDNGEPEKALEIFE--------- 481
Query: 326 KFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEV 385
K + SK +E DI IYN +++ + + +F L G+KP+ TY + +
Sbjct: 482 KIEKSK-----MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 386 TMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGT 445
+ G+ LF ++ G P TY +L+R EG ++ + I E+++ G
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 446 AS 447
AS
Sbjct: 597 AS 598
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 21/285 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
+ L+ L R EA + N M G ++ D+ Y +I + + G K LN++ M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
++ I+PD+VIY+A+++ ++F ++ + G+ PN T
Sbjct: 288 EETH--------------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y ++ G + L + P+ LT+ L+ KEGK+ EA + EM
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
R + Y + C + R+ DA + + A P VTF +I +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRV 448
Query: 499 DDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
D+ + E + N T NT++ + + D + A+ LF+E+
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
+D + PD+V +N +++ +K+ + +++ + GL N TY + + N
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
+ +LF ++ G P+ +T +L+ F + K++EA+E + E+ + I +V Y +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNI 542
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHC 512
G D ++ + P T+ MI I D +F MKD+
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 513 -SPNIGTINTMLK 524
P+ T NT+++
Sbjct: 603 HEPDNSTYNTLIR 615
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+ D V YN +++ + +F L G++P+ TY + + +
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTA 446
LF +++ +G P+ TY L+R K G++D+++E I EM G G A
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I P ++ +N +L++C + + V ++ ++K+ ++ + TY + + ++G +
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
G +RRSG ++ L+ + K+G D+A EM G+ T S Y C L
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPN 515
C +GR DA + + A P V++ ++ + G + + +F+ ++ P+
Sbjct: 354 CDFGRIDDARELLSSM-----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
I T NT++ ++ A+ L EE+
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEM 435
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 23/332 (6%)
Query: 221 LLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFN 280
L+R+L M+ ++ + A W+ D + QSR + +L +L + EA +
Sbjct: 88 LIRVLNMIRVKP--EIAFRFFNWIQRQSDVK--QSRQAFAAMLEILAENDLMSEA---YL 140
Query: 281 LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI-------VECMKQKPKTFKFKYSKNW 333
+ +ID+ H I L K + V K + F + K
Sbjct: 141 VAERSIDL-----GMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMI 195
Query: 334 DPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYD 393
P + N VL S+ S V++ + + G+ P T+ ++ ++G+ +
Sbjct: 196 RKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLE 255
Query: 394 LVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELA 453
V +++ +++R +TY +L+ F K GK++EA +M + G T + L
Sbjct: 256 RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 454 CCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCS 513
C G + DA +++ P T+ I + D G IDD E + +
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLN-AGIYPTTSTYNIYICALCDFGRIDDAR---ELLSSMAA 371
Query: 514 PNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
P++ + NT++ Y + KF +A LF++++
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 403
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 101/262 (38%), Gaps = 25/262 (9%)
Query: 285 NIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIY 344
N +YP + Y+ L G + + ++ M PD+V Y
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA------------------PDVVSY 377
Query: 345 NAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRR 404
N +++ + ++ S +F L+ + P+ TY ++ +SGN + L ++
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
P+ +TY LV+ F K G + A E EM ++G+ Y A G
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 465 AIPEVEKI----RRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTIN 520
A E++ P V G+ K I+ IF P+ T
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV---GLVPDHVTYT 554
Query: 521 TMLKVYGQNDKFSKAKFLFEEV 542
T+++ Y +N +F A+ L++E+
Sbjct: 555 TVIRGYLENGQFKMARNLYDEM 576
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
PD+ Y+ L + G N+V+ ++ + K F+ + PD V Y V+
Sbjct: 513 PDLTIYNVRIDGLCKVG------NLVKAIEFQRKIFRVG--------LVPDHVTYTTVIR 558
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
+ + Q+K ++ ++ + L P+ TY + + ++G + + ++++ G P
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAI 466
+T+ L+ K G +DEA + +ME+ G+ Y L C + +W++ +
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVV 675
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 114/271 (42%), Gaps = 20/271 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ K + EA +F+ +R D++P + Y+++ L ++G L+ + E M
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAG-DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+ +I PD++ Y ++ V + + V+ ++ + G+KP+G
Sbjct: 436 TTQ--------------LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 481
Query: 379 YGLAMEVTMQSGNYDLVHELFGQ-IRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
Y ++ G+ D L + + P+ Y V + K G + +A+E R++
Sbjct: 482 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+ G++ Y + G+++ A +++ R R P +T+ +I G
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR-KRLYPSVITYFVLIYGHAKAGR 600
Query: 498 IDDCACIFECMKDH-CSPNIGTINTMLKVYG 527
++ MK PN+ T N +L YG
Sbjct: 601 LEQAFQYSTEMKKRGVRPNVMTHNALL--YG 629
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+Y + + LGK ++ +F M+ + PD+ Y+ + + G+ G + E +NI E
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKD-GPSPDIFTYNILIASFGRVGEVDEAINIFE 501
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
+++ +PDI+ YN+++N + FK++++ GL P+
Sbjct: 502 ELERSD--------------CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY ME ++ ++ + LF ++ G P +TY +L+ K G+ EAV+ +
Sbjct: 548 VTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSK 607
Query: 437 MEKRGVIGTASVYYEL 452
M+++G+ + Y L
Sbjct: 608 MKQQGLTPDSITYTVL 623
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 50/293 (17%)
Query: 251 RKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKE 310
++Y ++ +Y+ L+ L K EA ++F M + V + +Y S+ +L AG E
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDM-WSFPVKGERDSYMSMLESLCGAGKTIE 425
Query: 311 LLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS 370
+ ++ + +K + D ++YN V +A KQ + +F+++KK
Sbjct: 426 AIEMLSKIHEKG--------------VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 371 GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEA 430
G P+ TY + + + G D +F ++ RS P+ ++Y L+ K G VDEA
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 431 VEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIK 490
+EM+++G+ Y L C R + A E
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE-------------------- 571
Query: 491 SSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
E + C PNI T N +L +N + ++A L+ ++K
Sbjct: 572 ---------------EMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 29/291 (9%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
F Y LL L K ++A Q+F M+ D Y + T+G+ G E + +
Sbjct: 239 FAYNMLLDALAK---DEKACQVFEDMKKR-HCRRDEYTYTIMIRTMGRIGKCDEAVGLFN 294
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M + T ++V YN ++ K VF ++ ++G +PN
Sbjct: 295 EMITEGLTL--------------NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNE 340
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY L + + + G + L G + S Y LVRT K G V EA +
Sbjct: 341 YTYSLLLNLLVAEGQ---LVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCD 397
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR---LPRARPLEVTFTGMIKSSM 493
M V G Y + LC G+ +AI + KI + F+ + K
Sbjct: 398 MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLK- 456
Query: 494 DGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
HI D +FE M KD SP+I T N ++ +G+ + +A +FEE++
Sbjct: 457 QISHIHD---LFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
F Y L+A G+ EA+ IF + + D PD+ +Y+S+ LG+ G + E +
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERS-DCKPDIISYNSLINCLGKNGDVDEAHVRFK 536
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M++K + PD+V Y+ ++ +++ + +F+++ G +PN
Sbjct: 537 EMQEKG--------------LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVR 419
TY + ++ ++G +L+ ++++ G P+++TY VL R
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 123/306 (40%), Gaps = 58/306 (18%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ VL K + +A+Q+F+ M P+ Y + L G L L +VE
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMV-ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEIS 366
Query: 319 KQKPKTFKFKY------------------SKNWDPIIEPDIVIYNAVLNA-CVPSKQWKG 359
K+ + Y W ++ + Y ++L + C K +
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 360 VSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVR 419
+ + K + + G+ + Y + +H+LF ++++ G P+ TY +L+
Sbjct: 427 IEMLSK-IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 420 TFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRAR 479
+F + G+VDEA+ E+E+ D P++
Sbjct: 486 SFGRVGEVDEAINIFEELER-----------------------SDCKPDI---------- 512
Query: 480 PLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFL 538
+++ +I G +D+ F+ M++ +P++ T +T+++ +G+ ++ A L
Sbjct: 513 ---ISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Query: 539 FEEVKV 544
FEE+ V
Sbjct: 570 FEEMLV 575
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 37/243 (15%)
Query: 338 EPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+PD++ N ++N C+ K+ + + + K ++ G +PN TYG + V +SG L
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
EL ++ +A+ Y +++ K G +D A EME +G+ Y L
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 457 CYYGRWQDA-------------------------------IPEVEKIRRLPRAR---PLE 482
C GRW D + E E++ + R P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 483 VTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEE 541
+T+T +I H+D + + M C PNI T N ++ Y + ++ LF +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 542 VKV 544
+ +
Sbjct: 429 MSL 431
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 17/286 (5%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y +L V+ K+ + A+++ M ++ D Y I L + G L N+ M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+ K I +I+ YN ++ + +W + + + + K + PN T
Sbjct: 290 EMKG--------------ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
+ + ++ ++ G EL ++ G P+ +TY L+ F KE +D+A + + M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
+G + L C R D + K+ L VT+ +I+ + G +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS-LRGVVADTVTYNTLIQGFCELGKL 454
Query: 499 DDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ +F E + PNI T +L N + KA +FE+++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 268 KARRPKEALQIFNLM--RGNIDVYPDMAAYHSIA---VTLGQAGLLKELLNIVECMKQKP 322
KA R + L++F M RG V D Y+++ LG+ + KEL + K P
Sbjct: 415 KANRIDDGLELFRKMSLRG---VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 323 KTFKFK------------------YSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVF 364
+K + K +E DI IYN +++ + + +F
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 365 KQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKE 424
L G+KP TY + + + G LF ++ G P+ TY +L+R +
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 425 GKVDEAVEAIREMEKRGVIGTAS 447
G ++V+ I E+++ G AS
Sbjct: 592 GDATKSVKLIEELKRCGFSVDAS 614
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 95/207 (45%), Gaps = 4/207 (1%)
Query: 338 EPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
EP+ + ++ ++N C+ + + + V ++ + G KP+ T + SG
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELV-DRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
L ++ G P A+TY ++ K G+ A+E +R+ME+R + A Y + L
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPN 515
C +G +A ++ + +T+ +I + G DD A + + +K +PN
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNI-ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ T + ++ + + K +A+ L +E+
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEM 359
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 338 EPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+P ++ N ++N C+ K V + ++ ++G +PN TYG + V +SG L
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLI-DRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
EL ++ +A+ Y +++ K+G +D A EME +G Y L
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 457 CYYGRWQDAIPEV-EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSP 514
C GRW D + + I+R + P VTF+ +I S + G + + + E M+ +P
Sbjct: 309 CNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 515 NIGTINTMLKVYGQNDKFSKA 535
N T N+++ + + ++ +A
Sbjct: 367 NTITYNSLIDGFCKENRLEEA 387
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+ D V Y+ +++ +F +++ G K + TY + +G +D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+L + + P +T+ VL+ +F KEGK+ EA + ++EM +RG+ Y L
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPN 515
C R ++AI V+ + P +TF +I IDD +F M N
Sbjct: 379 CKENRLEEAIQMVDLMIS-KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
T NT+++ + Q+ K AK LF+E+
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I P++V ++ ++++ V + + + K++ + G+ PN TY ++ + +
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
++ + G P+ +T+ +L+ + K ++D+ +E REM RGVI Y L
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 457 CYYGRWQDAIPEV-EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF 505
C G+ + A E + R R RP V++ ++ D G ++ IF
Sbjct: 449 CQSGKLEVAKKLFQEMVSR--RVRPDIVSYKILLDGLCDNGELEKALEIF 496
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
++ L+ K + +EA Q+ M RG + P+ Y+S+ + L+E + +V+
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRG---IAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M SK DP DI+ +N ++N + + +F+++ G+ N
Sbjct: 393 LM----------ISKGCDP----DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY ++ QSG ++ +LF ++ P+ ++YK+L+ G++++A+E +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDA 465
+EK + +Y + +C + DA
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 338 EPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
EPD VI+N +LN C+ + + + V ++ + G KP T + +G
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELV-DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
L ++ +G P +TY ++ K G+ A+E +R+ME+R + A Y + L
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPN 515
C G +A ++ + + +T+ +I + G DD A + + +K SPN
Sbjct: 274 CKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ T + ++ + + K +A L +E+
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEM 359
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 337 IEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLV 395
I P+ + YN++++ C ++ + + V + K G P+ T+ + + ++ D
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDG 422
Query: 396 HELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
ELF ++ G + +TY LV+ F + GK++ A + +EM R V Y L
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 456 LCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPN 515
LC G + A+ KI + + + + +I + +DD +F CS
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGI-YMIIIHGMCNASKVDDAWDLF------CSLP 535
Query: 516 IGTI-------NTMLKVYGQNDKFSKAKFLFEEV 542
+ + N M+ + D SKA LF ++
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 25/256 (9%)
Query: 274 EALQIFN--LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSK 331
EAL++ + L RG + PDM Y++I + + G++ +V ++ K
Sbjct: 246 EALKLMDEMLSRG---LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG--------- 293
Query: 332 NWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGN 391
EPD++ YN +L A + +W+ + ++ PN TY + + + G
Sbjct: 294 -----CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 392 YDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYE 451
+ L ++ G P+A +Y L+ F +EG++D A+E + M G + Y
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 452 LACCLCYYGRWQDAIPEVEKIRRL---PRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
+ LC G+ A+ K+ + P + F+ + S G I I E M
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS---GDKIRALHMILEMM 465
Query: 509 KDHCSPNIGTINTMLK 524
+ P+ T N+M+
Sbjct: 466 SNGIDPDEITYNSMIS 481
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 142/365 (38%), Gaps = 62/365 (16%)
Query: 214 LPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVY-TKLLAVLGKARRP 272
L F + Q+L+I G + ++L +++ + + Y + TKL+ R
Sbjct: 85 LGFRDTQMLKIFHRSCRSGNYIESLHLLETMV----RKGYNPDVILCTKLIKGFFTLRNI 140
Query: 273 KEALQIFNLMR--GNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYS 330
+A+++ ++ G PD+ AY+++ + + + +++ M+ K
Sbjct: 141 PKAVRVMEILEKFGQ----PDVFAYNALINGFCKMNRIDDATRVLDRMRSKD-------- 188
Query: 331 KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG 390
PD V YN ++ + + V QL +P TY + +E TM G
Sbjct: 189 ------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 391 NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYY 450
D +L ++ G P+ TY ++R KEG VD A E +R +E +G Y
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 451 ELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK- 509
L L G+W++ + K+ + P VT++ +I + G I++ + + MK
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 510 -----------------------------------DHCSPNIGTINTMLKVYGQNDKFSK 534
D C P+I NT+L +N K +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 535 AKFLF 539
A +F
Sbjct: 422 ALEIF 426
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 94/239 (39%), Gaps = 16/239 (6%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
P++ Y + TL + G ++E +N+++ MK+K T PD Y+ ++
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT--------------PDAYSYDPLIA 376
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
A + + + G P+ Y + ++G D E+FG++ G P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ +Y + W G A+ I EM G+ Y + CLC G +A +
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYG 527
+R P VT+ ++ I+D + E M + C PN T +++ G
Sbjct: 497 VDMRSC-EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 18/270 (6%)
Query: 257 FVYTKLLAVLGKARRPKEALQIF-NLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
F Y L++ L R +A ++ +++ NI+ PD+ ++++ + G L E +
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNIN--PDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
+ M + F PD+V YN ++ K+ + VF+++ + GL N
Sbjct: 344 DEMVKSKHCF-------------PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TY + Q+ + D +F Q+ G P+ +TY +L+ G V+ A+
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
M+KR + Y + LC G+ +D + L +P VT+T M+
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRK 509
Query: 496 GHIDDCACIFECMK-DHCSPNIGTINTMLK 524
G ++ +F MK D PN GT NT+++
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 91/207 (43%), Gaps = 3/207 (1%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+PD V + +++ + + +++ G +P+ TYG + + G DL
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + + + Y ++ K +D+A + +ME +G+ Y L CLC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM--KDHCSPN 515
YGRW DA + + P V F +I + + G + + +++ M HC P+
Sbjct: 297 NYGRWSDASRLLSDMLE-KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ NT++K + + + + +F E+
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREM 382
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT L+ +AR A +F M + V+PD+ Y+ + L G ++ L + E M
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSW-VFKQLKKSGLKPNG 376
+++ ++ DIV Y ++ A C K G W +F L G+KPN
Sbjct: 453 QKRD--------------MKLDIVTYTTMIEALCKAGKVEDG--WDLFCSLSLKGVKPNV 496
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY M + G + LF +++ G +P + TY L+R ++G + E I+E
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKE 556
Query: 437 MEKRGVIGTASVY 449
M G G AS +
Sbjct: 557 MRSCGFAGDASTF 569
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 28/289 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+T L+ L + + EA+ + M +G PD+ Y ++ L + G LN++
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKG---CQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M++ IE D+VIYN +++ K +F +++ G+KP+
Sbjct: 240 KMEKGK--------------IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + G + L + P+ + + L+ F KEGK+ EA + E
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 437 MEK-RGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPL---EVTFTGMIKSS 492
M K + Y L C Y R ++ + E R + + R L VT+T +I
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM---EVFREMSQ-RGLVGNTVTYTTLIHGF 401
Query: 493 MDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
D+ +F+ M D P+I T N +L N A +FE
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 32/277 (11%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+T L+ +A EA+ FN M + PD A+ + L + E + +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRME-DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS 246
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+K + EPD+++Y ++ + + VFK++K +G++PN
Sbjct: 247 LKDR---------------FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVY 291
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + ++ + G H++F + SG P A+T+ L+R K G+ ++ ++ +M
Sbjct: 292 TYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 351
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEV---TFTGMI----- 489
+K G Y L C ++A+ K+ + EV TF +
Sbjct: 352 KKLGCEPDTITYNFLIEAHCRDENLENAV----KVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 490 KSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVY 526
K ++G H + M+ C PN T N +++++
Sbjct: 408 KRDVNGAH----RMYSKMMEAKCEPNTVTYNILMRMF 440
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 54/128 (42%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
EPD + YN ++ A + + V + K + N +T+ + + + H
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR 416
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
++ ++ + P +TY +L+R F D ++ +EM+ + V + Y L C
Sbjct: 417 MYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Query: 458 YYGRWQDA 465
G W +A
Sbjct: 477 GMGHWNNA 484
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 125/288 (43%), Gaps = 17/288 (5%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+ L+ +A + +A + ++R +V PD ++++ GQ+G + +++
Sbjct: 539 TFGALIDGCARAGQVAKAFGAYGILRSK-NVKPDRVVFNALISACGQSGAVDRAFDVLAE 597
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
MK + I+PD + A++ AC + Q + V++ + K G++
Sbjct: 598 MKAETHP------------IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
Y +A+ +SG++D ++ ++ P+ + + L+ +DEA +++
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 438 EKRGV-IGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
+ +G+ +GT S Y L C W+ A+ EKI+ + + RP T +I + +G
Sbjct: 706 KSQGIRLGTIS-YSSLMGACCNAKDWKKALELYEKIKSI-KLRPTISTMNALITALCEGN 763
Query: 497 HIDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ + +K PN T + ++ + D F + L + K
Sbjct: 764 QLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAK 811
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 174/429 (40%), Gaps = 50/429 (11%)
Query: 134 RESLNELKEMFQARKMDQLKWVFDD--DIEINEHWYNESY-------GLLKRTQKRSEVE 184
R+ ++ E F + D K VF + ++ + +H N S+ G LK + R
Sbjct: 177 RDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRS 236
Query: 185 VIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEM-LGLRGCWKQALSVVQW 243
L++ + + R M L+ L +G LR L G W++AL++V+
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRM-DGFTLRCFAYSLCKVGKWREALTLVET 295
Query: 244 VYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSI---AV 300
D YTKL++ L +A +EA+ N MR P++ Y ++ +
Sbjct: 296 ENFVPD------TVFYTKLISGLCEASLFEEAMDFLNRMRAT-SCLPNVVTYSTLLCGCL 348
Query: 301 TLGQAGLLKELLN--IVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWK 358
Q G K +LN ++E PK I+N++++A S
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPK-------------------IFNSLVHAYCTSGDHS 389
Query: 359 GVSWVFKQLKKSGLKPNGATYGLAM------EVTMQSGNYDLVHELFGQIRRSGEVPEAL 412
+ K++ K G P Y + + + ++ DL + + ++ +G V +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 413 TYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKI 472
R GK ++A IREM +G I S Y ++ LC + + A E++
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 473 RRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDK 531
+R + T+T M+ S G I+ F M++ C+PN+ T ++ Y + K
Sbjct: 510 KRGGLVADV-YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 532 FSKAKFLFE 540
S A LFE
Sbjct: 569 VSYANELFE 577
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 123/328 (37%), Gaps = 52/328 (15%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLM-RGNIDVYPDMAAYHSIAVTLGQAGLLKELL----- 312
Y+K+L L A + + A +F M RG + D+ Y + + +AGL+++
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGL--VADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 313 --------NIVECMKQKPKTFKFKYSKNWDPIIE--------PDIVIYNAVLN------- 349
N+V K K + + E P+IV Y+A+++
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 350 ---AC------VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFG 400
AC SK V FKQ + +PN TYG ++ +S + +L
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 401 QIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYG 460
+ G P + Y L+ K GK+DEA E EM + G T Y L
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI------D 717
Query: 461 RW-----QDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSP 514
R+ QD +V P V +T MI G D+ + + M++ C P
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 515 NIGTINTMLKVYGQNDKFSKAKFLFEEV 542
N+ T M+ +G K L E +
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERM 805
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 132/332 (39%), Gaps = 47/332 (14%)
Query: 219 GQLLRILEMLGLRGCW---KQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEA 275
G+ R+L M+ + GC+ K S+V DH + Y L ++ P
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS-----YAYKLLKKMVKCGHMP--G 406
Query: 276 LQIFNLMRGNI-----DVYPDMAAYHSIAVT-LGQAGLLKELLNI---VECMKQKPKTFK 326
++N++ G+I + D+ A + + AG++ +N+ C+ K
Sbjct: 407 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK--- 463
Query: 327 FKYSKNWDPIIE-------PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATY 379
Y K + I E PD Y+ VLN + + + +F+++K+ GL + TY
Sbjct: 464 --YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 380 GLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEK 439
+ ++ ++G + + F ++R G P +TY L+ + K KV A E M
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 440 RGVIGTASVYYELACCLCYYGRWQDAIPEVEKI---RRLPRA------------RPLEVT 484
G + Y L C G+ + A E++ + +P RP VT
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 485 FTGMIKSSMDGGHIDDCACIFECMK-DHCSPN 515
+ ++ +++ + + M + C PN
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 30/258 (11%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAG-------LLKEL 311
YT L+ L K R A+++FN M G P++ Y+++ L + G LL+++
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQM-GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 312 LNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSG 371
MK++ IEP+++ + A+++A V + ++ + +
Sbjct: 250 ------MKRR---------------IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
+ P+ TYG + G D ++F + R+G P + Y L+ F K +V++ +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
+ EM ++GV+ Y L C GR D EV RA P T+ ++
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGR-PDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 492 SMDGGHIDDCACIFECMK 509
G ++ IFE M+
Sbjct: 408 LCCNGKVEKALMIFEYMR 425
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 16/252 (6%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
+T L+ K + EA +++N+M + VYPD+ Y S+ L GLL E + M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMI-QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
++ P+ VIY +++ SK+ + +F ++ + G+ N T
Sbjct: 320 ERNG--------------CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y + ++ G D+ E+F Q+ P+ TY VL+ GKV++A+ M
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
KR + Y + +C G+ +DA + +P +T+T MI G I
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS-KGMKPNVITYTTMISGFCRRGLI 484
Query: 499 DDCACIFECMKD 510
+ +F+ MK+
Sbjct: 485 HEADSLFKKMKE 496
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 119/293 (40%), Gaps = 17/293 (5%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
+T LL R ++A+ +F+ + G + P++ Y ++ L + + L + VE
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILG-MGFKPNVVTYTTLIRCLCKN---RHLNHAVELF 211
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
Q P++V YNA++ +W +W+ + + K ++PN T
Sbjct: 212 NQMGTNGS-----------RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
+ ++ ++ G EL+ + + P+ TY L+ G +DEA + ME
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
+ G +Y L C R +D + ++ + +T+T +I+ G
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ-KGVVANTITYTVLIQGYCLVGRP 379
Query: 499 DDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVATSDFN 550
D +F M P+I T N +L N K KA +FE ++ D N
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 127/289 (43%), Gaps = 26/289 (8%)
Query: 166 WYNESYGLLKRTQKRSEVEVIRF--LVERLSDREITTKDWKLSRLM-KLSGLP--FTEGQ 220
W + ++ L ++R E VI F L++ + +L +M ++S P FT G
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 221 LLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFN 280
L+ L M GL +Q Y + + Y + +YT L+ K++R ++ ++IF
Sbjct: 299 LINGLCMYGLLDEARQMF------YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 281 LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPD 340
+M+ +A T+ L++ C+ +P + +++ PD
Sbjct: 353 ----------EMSQKGVVANTITYTVLIQGY-----CLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 341 IVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFG 400
I YN +L+ + + + +F+ ++K + N TY + ++ + G + +LF
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 401 QIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVY 449
+ G P +TY ++ F + G + EA ++M++ G + SVY
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 116/289 (40%), Gaps = 23/289 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE-- 316
+T+LL+V+ K R + +F M+ LG LL NIV
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQ-----------------ILGIPPLLCTC-NIVMHC 127
Query: 317 -CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
C+ +P K EPD+V + ++LN + + +F Q+ G KPN
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TY + ++ + + ELF Q+ +G P +TY LV + G+ +A +R
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
+M KR + + L G+ +A E+ + P T+ +I
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEA-KELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 496 GHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
G +D+ +F M ++ C PN T++ + ++ + +F E+
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 92/241 (38%), Gaps = 40/241 (16%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGN------- 391
P I+ + +L+ ++ V +F+Q++ G+ P T + M S
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 392 ----------YDLVH------------------ELFGQIRRSGEVPEALTYKVLVRTFWK 423
DLV LF QI G P +TY L+R K
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEV 483
++ AVE +M G Y L LC GRW DA + + + R P +
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK-RRIEPNVI 259
Query: 484 TFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTM---LKVYGQNDKFSKAKFLF 539
TFT +I + + G + + ++ M + P++ T ++ L +YG D+ + +L
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 540 E 540
E
Sbjct: 320 E 320
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSW---VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLV 395
P ++ YNAVL+A + SK + +S+ VFK++ +S + PN TY + + +GN D+
Sbjct: 167 PGVLSYNAVLDATIRSK--RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 396 HELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
LF ++ G +P +TY L+ + K K+D+ + +R M +G+ Y +
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 456 LCYYGRWQDAIPEVEKIRRLPRARPL-EVTFTGMIKSSMDGGHIDDCACIFECMKDH-CS 513
LC GR ++ + ++ R R L EVT+ +IK G+ + M H +
Sbjct: 285 LCREGRMKEVSFVLTEMNR--RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 514 PNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
P++ T +++ + ++A ++++V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+EP+++ YN V+N + K VS+V ++ + G + TY ++ + GN+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ ++ R G P +TY L+ + K G ++ A+E + +M RG+ Y L
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPN 515
G +A + ++ P VT+ +I G ++D + E MK+ SP+
Sbjct: 391 SQKGYMNEAYRVLREMND-NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 516 IGTINTML 523
+ + +T+L
Sbjct: 450 VVSYSTVL 457
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 127/301 (42%), Gaps = 34/301 (11%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT L+ + EA ++ M N P + Y+++ G +++ + ++E M
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
K+K + PD+V Y+ VL+ S V +++ + G+KP+ T
Sbjct: 442 KEKG--------------LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y ++ + +L+ ++ R G P+ TY L+ + EG +++A++ EM
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTF------------- 485
++GV+ Y L L R ++A + K+ + P +VT+
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL-FYEESVPSDVTYHTLIENCSNIEFK 606
Query: 486 --TGMIKSSMDGGHIDDCACIFECM--KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEE 541
+IK G + + +FE M K+H P+ N M+ + + KA L++E
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNH-KPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 542 V 542
+
Sbjct: 666 M 666
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 126/290 (43%), Gaps = 23/290 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
YT L+ L K K+ +++ M+ + V+P++ Y+ + L + G K+ + +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQED-GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M+++ + +IV YN ++ + + V Q+K G+ PN
Sbjct: 294 MRERG--------------VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ G L ++ G P +TY +LV F ++G A + ++EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIP---EVEKIRRLPRARPLEVTFTGMIKSSMD 494
E+RG+ + Y L + AI +E++ +P T++ +I
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVH----TYSVLIHGFCI 455
Query: 495 GGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
G +++ + +F+ M + +C PN NTM+ Y + +A L +E++
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 128/292 (43%), Gaps = 19/292 (6%)
Query: 253 YQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELL 312
+ + + Y ++ L K R K+A Q+F+ MR V ++ Y+++ L + L E
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER-GVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 313 NIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSG 371
+V+ MK I P+++ YN +++ C K K +S + LK G
Sbjct: 324 KVVDQMKSDG--------------INPNLITYNTLIDGFCGVGKLGKALSLC-RDLKSRG 368
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
L P+ TY + + + G+ ++ ++ G P +TY +L+ TF + +++A+
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
+ ME+ G++ Y L C G+ +A + K P EV + MI
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA-SRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 492 -SMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+G + E + +PN+ + M++V + K +A+ L E++
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 9/221 (4%)
Query: 331 KNWDPIIE-------PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAM 383
K++D +IE P++VIY +++ C + + +F ++ K GL N TY + +
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 384 EVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVI 443
++G E++ +++ G P TY ++ K+G+ +A + EM +RGV
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300
Query: 444 GTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCAC 503
Y L LC + +A V++++ P +T+ +I G +
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKS-DGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 504 IFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ +K SP++ T N ++ + + S A + +E++
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D+ + ++ C + + + + +L + G PN Y ++ + G + +LF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
++ + G V TY VL+ +K G + E +M++ GV Y + LC
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGT 518
GR +DA +++R + + VT+ +I +++ + + MK D +PN+ T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNI-VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 519 INTMLKVYGQNDKFSKAKFLFEEVK 543
NT++ + K KA L ++K
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLK 365
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 134/314 (42%), Gaps = 31/314 (9%)
Query: 254 QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLN 313
++ YT L+ L ARR EA+ +F M+ + + +P + Y + +L + E LN
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD-ECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 314 IVECMKQ---KPKTFKF-----------KYSKNWDPI-------IEPDIVIYNAVLNACV 352
+V+ M++ KP + K+ K + + + P+++ YNA++N
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 353 PSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGE---VP 409
+ V + ++ L PN TY ++ +S VH+ G + + E +P
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN----VHKAMGVLNKMLERKVLP 460
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ +TY L+ + G D A + M RG++ Y + LC R ++A
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQ 528
+ + + P V +T +I G +D+ + E M +C PN T N ++
Sbjct: 521 DSLEQ-KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 529 NDKFSKAKFLFEEV 542
+ K +A L E++
Sbjct: 580 DGKLKEATLLEEKM 593
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 114/235 (48%), Gaps = 16/235 (6%)
Query: 256 RFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
++ YT ++ L K++R +EA +F+ + V P++ Y ++ +AG + E ++
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
E M SKN P+ + +NA+++ + K + + +++ K GL+P
Sbjct: 556 EKM----------LSKNC----LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
+T + + ++ G++D + F Q+ SG P+A TY ++T+ +EG++ +A + +
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIK 490
+M + GV Y L G+ A ++++R P + TF +IK
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD-TGCEPSQHTFLSLIK 715
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P + Y ++ + S++ + K+++++G+KPN TY + ++ ++ EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
GQ+ G +P +TY L+ + K G +++AV+ + ME R + Y EL C
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC- 439
Query: 459 YGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIG 517
A+ + K+ + P VT+ +I G+ D + M D P+
Sbjct: 440 KSNVHKAMGVLNKMLE-RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 518 TINTMLKVYGQNDKFSKAKFLFEEVK 543
T +M+ ++ + +A LF+ ++
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLE 524
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 122/275 (44%), Gaps = 22/275 (8%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQK---PKTFKFK-----YSKN--------W 333
P++ Y+++ + G++++ +++VE M+ + P T + Y K+
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 334 DPIIE----PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQS 389
+ ++E PD+V YN++++ S + + + GL P+ TY ++ +S
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 390 GNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVY 449
+ +LF + + G P + Y L+ + K GKVDEA + +M + + + +
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 450 YELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM- 508
L LC G+ ++A EK+ ++ +P T T +I + G D F+ M
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIG-LQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 509 KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
P+ T T ++ Y + + A+ + +++
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 330 SKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQS 389
SK + ++PD Y +++ K VF ++ G + N Y + +
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 390 GNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV---IGTA 446
D +LF +++ P TY VL+++ + EA+ ++EME+ G+ I T
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 447 SVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFE 506
+V + C C + + ++ + ++ + +P +T+ +I G I+D + E
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNV----ITYNALINGYCKRGMIEDAVDVVE 417
Query: 507 CMKDH-CSPNIGTINTMLKVYGQND 530
M+ SPN T N ++K Y +++
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSN 442
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 253 YQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELL 312
Y + Y+ L+ L R KEA+++F M + PD ++ + +AG ++
Sbjct: 229 YPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAK 288
Query: 313 NIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGL 372
I++ MK+ P++ Y+A++N + + F ++KK+GL
Sbjct: 289 KILDFMKKNG--------------CNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGL 334
Query: 373 KPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
K + Y M ++G D +L G+++ S + LTY V++R EG+ +EA++
Sbjct: 335 KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQ 394
Query: 433 AIREMEKRGVIGTASVYYELACCLCYYGRWQDAI 466
+ + GV Y + LC G + A+
Sbjct: 395 MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 3/175 (1%)
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRS-GEVPEALTYKVLVRTFWKEGKVDEA 430
+KP+ + + + SG +L +L + + G P + +LV+ K G ++ A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 431 VEAIREMEKRGVIGTASVYYE-LACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMI 489
+ EM++ G+ S+ Y L CL + R ++A+ E + P VTF MI
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 490 KSSMDGGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
G ++ I + MK + C+PN+ + ++ + + K +AK F+EVK
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 124/283 (43%), Gaps = 27/283 (9%)
Query: 252 KYQS-RF---VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHS---IAVTLGQ 304
KY++ RF ++ L+ ++ + +++FNL++ V P + A + + + G+
Sbjct: 116 KYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGE 175
Query: 305 AGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVF 364
L ++LL Y+K+ + ++P+ I+N ++ + V
Sbjct: 176 VNLSRKLL---------------LYAKH-NLGLQPNTCIFNILVKHHCKNGDINFAFLVV 219
Query: 365 KQLKKSGLK-PNGATYGLAMEVTMQSGNYDLVHELF-GQIRRSGEVPEALTYKVLVRTFW 422
+++K+SG+ PN TY M+ ELF I + G P+ +T+ V++ F
Sbjct: 220 EEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFC 279
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLE 482
+ G+V+ A + + M+K G Y L C G+ Q+A +++++ +
Sbjct: 280 RAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKK-TGLKLDT 338
Query: 483 VTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGTINTMLK 524
V +T ++ G D+ + MK C + T N +L+
Sbjct: 339 VGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILR 381
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 13/183 (7%)
Query: 289 YPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVL 348
YP+ Y ++ L KE + + E M K I PD V +N ++
Sbjct: 229 YPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEG-------------ISPDPVTFNVMI 275
Query: 349 NACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEV 408
N + + + + +KK+G PN Y M + G + F +++++G
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 409 PEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPE 468
+ + Y L+ F + G+ DEA++ + EM+ Y + L GR ++A+
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQM 395
Query: 469 VEK 471
+++
Sbjct: 396 LDQ 398
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 132/329 (40%), Gaps = 33/329 (10%)
Query: 239 SVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSI 298
S + + + H + +Y L+ L K R EALQ+ M + PD ++ +
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF-LMGCVPDAETFNDV 293
Query: 299 AVTLGQAGLLKELLNIVECMKQK---PKTFKFKYSKN--------------WDPIIEPDI 341
+ L + + E +V M + P + Y N + I +P+I
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 342 VIYNAVLNACVPSKQWKGVSWVFKQLKKS-GLKPNGATYGLAMEVTMQSGNYDLVHELFG 400
VI+N +++ V + V + S G+ P+ TY + + G L E+
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 401 QIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYG 460
+R G P +Y +LV F K GK+DEA + EM G+ + L C
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 461 RWQDAIPE-VEKIRRLPR--ARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCS---- 513
R IPE VE R +PR +P TF +I + +D+ ++D S
Sbjct: 474 R----IPEAVEIFREMPRKGCKPDVYTFNSLISGLCE---VDEIKHALWLLRDMISEGVV 526
Query: 514 PNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
N T NT++ + + + +A+ L E+
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 25/284 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ L++ K R EA++IF M +G PD+ ++S+ L + +K L ++
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKG---CKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M + + + V YN ++NA + + K + ++ G +
Sbjct: 519 DMISEG--------------VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY ++ ++G D LF ++ R G P ++ +L+ + G V+EAVE +E
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR--LPRARPLEVTFTGMIKSSMD 494
M RG + L LC GR +D + K++ +P P VTF ++
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP---PDTVTFNTLMSWLCK 681
Query: 495 GGHI-DDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKF 537
GG + D C + E ++D PN T + +L+ + + +F
Sbjct: 682 GGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 6/206 (2%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
EP YN VL V K + VF + + P T+G+ M+ D
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L + + G VP ++ Y+ L+ + K +V+EA++ + EM G + A + ++ LC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 458 YYGRWQDAIPEVEKIRRLPRA-RPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNI 516
+ R +A V R L R P ++T+ ++ G +D +F + P I
Sbjct: 299 KFDRINEAAKMVN--RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---KPEI 353
Query: 517 GTINTMLKVYGQNDKFSKAKFLFEEV 542
NT++ + + + AK + ++
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDM 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 93/238 (39%), Gaps = 11/238 (4%)
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
+M +S T ++ E+L C K F S+ I P + + V+ A
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK----IPPTLFTFGVVMKA 226
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+ + + + K G PN Y + + + +L ++ G VP+
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE 470
A T+ ++ K +++EA + + M RG Y L LC GR DA ++
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR-VDAAKDL- 344
Query: 471 KIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH--CSPNIGTINTMLKVY 526
R+P +P V F +I + G +DD + M P++ T N+++ Y
Sbjct: 345 -FYRIP--KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 17/276 (6%)
Query: 262 LLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK 321
L K RR L+IF M +D + Y ++T+ GL + VE K+
Sbjct: 195 FLVAAKKRRRIDLCLEIFRRM---VDSGVKITVY---SLTIVVEGLCRR--GEVEKSKKL 246
Query: 322 PKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGL 381
K F K I+P+ YN ++NA V + + GV V K +KK G+ N TY L
Sbjct: 247 IKEFSVKG-------IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 382 AMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
ME+++++G +LF ++R G + Y L+ ++G + A E+ ++G
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 442 VIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDC 501
+ ++ Y L +C G A + +++ +V F +I G +D+
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS-KGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 502 ACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAK 536
+ I++ M+ ++ T NT+ + + ++ +AK
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAK 454
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Query: 233 CWKQALSVVQWVYNYKDHRKYQSR-FVYTKLLAVLGKARRPKEALQ-IFNLMRGNIDVYP 290
C K + +Y+ + + +Q+ F + + + +R EA Q +F +M G + +
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL-- 467
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
+Y ++ + G ++E + M K ++P+ + YN ++ A
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG--------------VQPNAITYNVMIYA 513
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+ K + ++ +G+ P+ TY + + N D LF ++ G
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 573
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
++TY V++ K GK DEA EM+++G VY L
Sbjct: 574 SVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 362 WVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTF 421
W+F+ ++ G+K + +Y ++V + GN + LF ++ G P A+TY V++ +
Sbjct: 456 WLFRMME-GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAY 514
Query: 422 WKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPL 481
K+GK+ EA + ME G+ + Y L C D + E ++ + L
Sbjct: 515 CKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC----IADNVDEAMRLFSEMGLKGL 570
Query: 482 E---VTFTGMIKSSMDGGHIDDCACIFECMK 509
+ VT+T MI G D+ +++ MK
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+ P+ V +NA+++ + +K +F ++ GL P+ +YG+ ++ ++ +DL
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ +++R+G +TY ++ K G +DEAV + EM K G+ Y L
Sbjct: 429 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM------KD 510
C GR++ A V +I R+ + P + ++ +I + G + + I+E M +D
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLS-PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 511 HCSPNI 516
H + N+
Sbjct: 548 HFTFNV 553
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+PDIV Y+A++N ++K + ++ + GL PNG Y + + G
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
++ + G + T+ VLV + K GKV EA E +R M G++ +V ++ C +
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN-TVSFD--CLI 590
Query: 457 CYYGRWQDAIPEVEKIRRLPRA--RPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSP 514
YG + + + + P T+ ++K GGH+ + + + H P
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL--HAVP 648
Query: 515 -NIGTI--NTMLKVYGQNDKFSKAKFLFEEV 542
+ T+ NT+L ++ +KA LF E+
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
P + NA+L + V S + V K++ K + P+ AT+ + + V G+++
Sbjct: 195 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ +SG P +TY ++ + K+G+ A+E + M+ +GV Y L LC
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS-SMDGGHIDDCACIFECMKDHCSPNI 516
R + +R+ P EVT+ +I S +G + + E + SPN
Sbjct: 315 RSNRIAKGYLLLRDMRK-RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 373
Query: 517 GTINTMLKVYGQNDKFSKAKFLF 539
T N ++ + F +A +F
Sbjct: 374 VTFNALIDGHISEGNFKEALKMF 396
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 114/289 (39%), Gaps = 22/289 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
+Y+ L+ + KEA++I+ M G+ D ++ + +L +AG + E +
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHT---RDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
CM D I+ P+ V ++ ++N S + VF ++ K G P
Sbjct: 572 RCMTS-------------DGIL-PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 617
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TYG ++ + G+ + + + + Y L+ K G + +AV
Sbjct: 618 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 677
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
EM +R ++ + Y L LC G+ AI ++ P +V +T +
Sbjct: 678 EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 737
Query: 496 GHIDDCACIFECMKD--HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
G E M + H +P+I T N M+ Y + K K L E+
Sbjct: 738 GQWKAGIYFREQMDNLGH-TPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 19/258 (7%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
P AA S+ L + G ++E LN+V+ + D + P++ +YNA+++
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVK--------------RVVDFGVSPNLFVYNALID 375
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
+ +++ +F ++ K GL+PN TY + +++ + G D G++ +G
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
Y L+ K G + A + EM + + T Y L C G+ A+
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQ 528
++ A P TFT ++ G I D +F M + + PN T N M++ Y +
Sbjct: 496 HEMTGKGIA-PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 529 NDKFSKAKFLFEEVKVAT 546
SKA FE +K T
Sbjct: 555 EGDMSKA---FEFLKEMT 569
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 129/294 (43%), Gaps = 26/294 (8%)
Query: 217 TEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEAL 276
+E + ++E L RG ++AL++V+ V ++ + FVY L+ L K R+ EA
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS---PNLFVYNALIDSLCKGRKFHEAE 387
Query: 277 QIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV-ECMKQKPKTFKFKY------ 329
+F+ M G I + P+ Y + + G L L+ + E + K + Y
Sbjct: 388 LLFDRM-GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 330 --------------SKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
++ + +EP +V Y +++ + ++ ++ G+ P+
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
T+ + ++G +LF ++ P +TY V++ + +EG + +A E ++
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMI 489
EM ++G++ Y L LC G+ +A V+ + + E+ +TG++
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK-GNCELNEICYTGLL 619
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 318 MKQKPKTFKFKYSKN-WDPIIE----PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGL 372
+ K KT FK + WD +I P+ V Y AV+N + + +++
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 373 KPNGATYGLAMEVTMQSGNYDL--VHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEA 430
PN TYG +++ + G D+ EL I + G + TY +L+R F ++G+++EA
Sbjct: 749 VPNQVTYGCFLDI-LTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEA 806
Query: 431 VEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPR--ARPLEVTFTGM 488
E I M GV Y + LC R D +E + RP V + +
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELC---RRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 489 IKSSMDGGHI 498
I G +
Sbjct: 864 IHGCCVAGEM 873
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 131/298 (43%), Gaps = 19/298 (6%)
Query: 248 KDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGL 307
K R Y S F+Y L+ L K +R +A Q+F+ M + P + Y+++ +AG
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR-RLLPSLITYNTLIDGYCKAG- 263
Query: 308 LKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQL 367
K+FK + D IEP ++ +N +L + + V K++
Sbjct: 264 ------------NPEKSFKVRERMKADH-IEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
K G P+ T+ + + + + ++ SG A T +L+ KEGK+
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 428 DEAVEAI-REMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFT 486
++A E + REM K G++ +Y + C G A ++E + + +P + +
Sbjct: 371 EKAEEILGREMAK-GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK-QGMKPDHLAYN 428
Query: 487 GMIKSSMDGGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+I+ + G +++ MK SP++ T N ++ YG+ +F K + +E++
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
++PD + YN ++ + + ++K G+ P+ TY + + + +D
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
++ ++ +G +P ++Y L+ K K+ EA R+ME RGV +Y L
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLE-VTFTGMIKS-SMDGGHIDDCACIFECMKDHCSP 514
C G+ +DA +++ L + L VT+ +I SM G + + E + P
Sbjct: 540 CSKGKIEDAFRFSKEM--LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 515 NIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
++ T N+++ YG + L+EE+K
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 347 VLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSG 406
+L+ V +KQ++ VF + +S +P+ YG A++ ++ + ELF +++
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209
Query: 407 EVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAI 466
P Y VL+ K ++++A + EM R ++ + Y L C G + +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 467 PEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKV 525
E+++ P +TF ++K G ++D + + MKD P+ T + +
Sbjct: 270 KVRERMKA-DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 526 YGQNDKFSKAKFLFEEVKVATSDFNA 551
Y N+K A ++E + NA
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNA 354
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 10/209 (4%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P+ VIYN +++ G + ++K G+KP+ Y + + G + +
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
+++ G P TY +L+ + ++ + D+ + ++EME G + Y L CLC
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 459 YGRWQDAIP---EVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF--ECMKDHCS 513
+ +A ++E P+ R + +I G I+D A F E +K
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVR----IYNMLIDGCCSKGKIED-AFRFSKEMLKKGIE 561
Query: 514 PNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
N+ T NT++ K S+A+ L E+
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 314 IVECMKQKPKTFKFKYSKN--WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSG 371
++ C+ + K + + K D + P + IYN +++ C + + K++ K G
Sbjct: 500 LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
++ N TY ++ +G +L +I R G P+ TY L+ + G V +
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 432 EAIREMEKRGVIGTASVYYELACCLC 457
EM++ G+ T Y+ L LC
Sbjct: 620 ALYEEMKRSGIKPTLKTYH-LLISLC 644
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 154/348 (44%), Gaps = 33/348 (9%)
Query: 227 MLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNI 286
+ L G + A ++ + N D +++ +Y ++ L ++R +A +++ M I
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAM-DKI 302
Query: 287 DVYPDMAAYHSIAVTLGQAG-LLKELLNIVECMKQKP------------KTFKFKYSKNW 333
+VYPD + TL +AG KE+ I E M +K K+F + K
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 334 DPIIEPDI---------VIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAME 384
+I+ ++ ++YN +++A S + V +F +++ GLKP+ ATY + M+
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 385 VTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV-DEAVEAIREMEKRGVI 443
+ D+V L ++ G P +Y L+ + + K+ D A +A M+K G+
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 444 GTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCAC 503
++ Y L G + A E++ + +P T+T ++ + G
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCK-EGIKPSVETYTSVLDAFRRSGDTGKLME 541
Query: 504 IFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVATSDFN 550
I++ M ++ T NT+L D F+K + L+ E + S+F+
Sbjct: 542 IWKLMLREKIKGTRITYNTLL------DGFAK-QGLYIEARDVVSEFS 582
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 124/290 (42%), Gaps = 22/290 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L++ K R EA +I + + P + Y+ + L ++G + + + +
Sbjct: 121 YNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL 180
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
K + ++P+++ YN ++N S++ V W+ ++LKKSG PN T
Sbjct: 181 KSR---------------VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y +++ ++ + +LF ++++ G + +V K G+ +EA E + E+
Sbjct: 226 YTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELV 285
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFT----GMIKSSMD 494
+ G V Y L + DA+ ++ + + +P + T T G++
Sbjct: 286 RSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNT 345
Query: 495 GGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
GG ACI E P++ T N ++ + +A LF ++V
Sbjct: 346 GGAEKHLACIGEM---GMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV 392
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+ PD++ YN ++ V ++++++G++P+ TY + ++ + V
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVL 103
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE-MEKRGVIGTASVYYELACC 455
+LF ++ SG P+ +Y L+ ++K G+ EA + + E + G++ Y L
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 456 LCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS---SMDGGHIDDCACIFECMKDHC 512
LC G +AI + ++ R +P +T+ +I S G +D + E K
Sbjct: 164 LCKSGHTDNAIELFKHLK--SRVKPELMTYNILINGLCKSRRVGSVD--WMMRELKKSGY 219
Query: 513 SPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+PN T TMLK+Y + + K LF ++K
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 15/222 (6%)
Query: 233 CWKQALSVVQWVYNYKDHRKYQSRFV-YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPD 291
C + + V W+ Y V YT +L + K +R ++ LQ+F M+ + D
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTF-D 257
Query: 292 MAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNAC 351
A ++ L + G +E ECM + ++ DIV YN +LN
Sbjct: 258 GFANCAVVSALIKTGRAEE---AYECMHELVRS----------GTRSQDIVSYNTLLNLY 304
Query: 352 VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEA 411
V + ++++ GLKP+ T+ + + + GN + I G P
Sbjct: 305 FKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSV 364
Query: 412 LTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELA 453
+T L+ K G VD A+ ME R SV + L
Sbjct: 365 VTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLC 406
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 25/253 (9%)
Query: 218 EGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQ 277
EG RI+ + G G ++ A V + + N R S + LL+ +++ +
Sbjct: 109 EGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLS---FNALLSAYRLSKKFDVVEE 165
Query: 278 IFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKE---LLNIVECMKQKPKTFKFK------ 328
+FN + G + + PD+ +Y+++ L + L E LL+ +E KP F
Sbjct: 166 LFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSS 225
Query: 329 YSKN--------WDPIIEPDIVI----YNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
Y K W ++E ++ I YNA L + K + +F +LK SGLKP+
Sbjct: 226 YLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDV 285
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
++ + ++ G D + +I + G P+ T+ +L+ K G + A+E +E
Sbjct: 286 FSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Query: 437 -MEKRGVIGTASV 448
KR ++G ++
Sbjct: 346 TFSKRYLVGQTTL 358
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 30/277 (10%)
Query: 233 CWKQALSVVQWVY-NYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDV--Y 289
C + + Q V+ N +D S+ Y+ LL GK +A ++F R ID +
Sbjct: 214 CKSKNVRKAQEVFENMRDRFTPDSK-TYSILLEGWGKEPNLPKAREVF---REMIDAGCH 269
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTFKF-----------KYSKNWDP 335
PD+ Y + L +AG + E L IV M KP TF + + + D
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 336 IIE-------PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
+E D+ ++N+++ A + + K V V K++K G+ PN + + + ++
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
G D ++F ++ + E P+A TY ++++ F ++ +++ A + + M K+GV +
Sbjct: 390 RGEKDEAFDVFRKMIKVCE-PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 449 YYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTF 485
+ L LC Q A +E++ + RP VTF
Sbjct: 449 FSVLINGLCEERTTQKACVLLEEMIEMG-IRPSGVTF 484
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 325 FKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAME 384
+ F + +D + P++V +N +L+A SK + VF+ ++ P+ TY + +E
Sbjct: 189 YAFNVMEKYD--LPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLE 245
Query: 385 VTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIG 444
+ N E+F ++ +G P+ +TY ++V K G+VDEA+ +R M+
Sbjct: 246 GWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP 305
Query: 445 TASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACI 504
T +Y L R ++A+ ++ R + V F +I + + + +
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV-FNSLIGAFCKANRMKNVYRV 364
Query: 505 FECMKDH-CSPNIGTINTMLK 524
+ MK +PN + N +L+
Sbjct: 365 LKEMKSKGVTPNSKSCNIILR 385
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 19/197 (9%)
Query: 234 WKQALSVVQWVYNYKDHRKYQSR-FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDM 292
W QAL V + ++ YQ + Y KLL +LGK+ +P A ++F+ M + P +
Sbjct: 104 WLQALEVFDML---REQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEE-GLEPTV 159
Query: 293 AAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACV 352
Y ++ ++ L+ + +I++ MK P+ +PD+ Y+ +L ACV
Sbjct: 160 ELYTALLAAYTRSNLIDDAFSILDKMKSFPQC-------------QPDVFTYSTLLKACV 206
Query: 353 PSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEV-PEA 411
+ Q+ V ++K++ + + PN T + + + G +D + ++ + S P+
Sbjct: 207 DASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDV 266
Query: 412 LTYKVLVRTFWKEGKVD 428
T +++ F GK+D
Sbjct: 267 WTMNIILSVFGNMGKID 283
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 397 ELFGQIR-RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
E+F +R ++ P+ TY L+ K G+ + A + EM + G+ T +Y L
Sbjct: 109 EVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAA 168
Query: 456 LCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSP 514
DA ++K++ P+ +P T++ ++K+ +D D +++ M + +P
Sbjct: 169 YTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITP 228
Query: 515 NIGTINTMLKVYGQNDKFSKAKFLFEEVKVATS 547
N T N +L YG+ +F + + + ++ V+T+
Sbjct: 229 NTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTA 261
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 19/225 (8%)
Query: 267 GKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFK 326
G+ RP ++L++F+ M+ + D P AY ++ L +++
Sbjct: 97 GRVHRPFDSLRVFHKMK-DFDCDPSQKAYVTVLAIL---------------VEENQLNLA 140
Query: 327 FKYSKNWDPI-IEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAME 384
FK+ KN I + P + N ++ A C +F ++ K G P+ TYG +
Sbjct: 141 FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLIS 200
Query: 385 VTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIG 444
+ G D +LF ++ P +TY L+ VDEA+ + EM+ +G+
Sbjct: 201 GLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
Query: 445 TASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMI 489
Y L LC GR A+ E+ ++ RP VT+T +I
Sbjct: 261 NVFTYSSLMDGLCKDGRSLQAM-ELFEMMMARGCRPNMVTYTTLI 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P +V Y +++N SK +++K G++PN TY M+ + G EL
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
F + G P +TY L+ KE K+ EAVE + M +G+ A +Y ++ C
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 459 YGRWQDA 465
++++A
Sbjct: 345 ISKFREA 351
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 255 SRFVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELL 312
SR VY L+A L K K+A + M RG I PD ++S+ +++ L
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI---PDTVTFNSLMHGYFVGSHVRKAL 733
Query: 313 NIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGL 372
+ YS + I P++ YN ++ + K V ++K G+
Sbjct: 734 S--------------TYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 779
Query: 373 KPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
+P+ TY + + GN ++ ++ G VP+ TY VL+ F GK+ +A E
Sbjct: 780 RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARE 839
Query: 433 AIREMEKRGVIGTASVYYELACCLC 457
++EM KRGV S Y + LC
Sbjct: 840 LLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
IEPDI +N ++N+ +G+ ++ ++K G+KP+ + + + + ++G +
Sbjct: 569 IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ Q+ P TY++ + T K + D + + G+ + VY L L
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 457 CYYGRWQDAIPEVEKIRRLPRAR---PLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-C 512
C G + A + + AR P VTF ++ G H+ + M +
Sbjct: 689 CKLGMTKKAAMVMGDM----EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Query: 513 SPNIGTINTMLK 524
SPN+ T NT+++
Sbjct: 745 SPNVATYNTIIR 756
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 253 YQSRFVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKE 310
Y + YT L+ L KA + AL +++ M RG + D+ Y + L +AG L+E
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG---IPVDLVVYTVLMDGLFKAGDLRE 347
Query: 311 LLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS 370
KTFK N P++V Y A+++ + ++ Q+ +
Sbjct: 348 ----------AEKTFKMLLEDNQ----VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Query: 371 GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEA 430
+ PN TY + ++ G + L ++ VP TY ++ +K GK + A
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 431 VEAIREMEKRGV 442
+E +EM GV
Sbjct: 454 IELSKEMRLIGV 465
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 286 IDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYN 345
+ VYP+ Y ++ +L +A + + L + YS+ I D+V+Y
Sbjct: 288 MSVYPNHVTYTTLVDSLFKANIYRHALAL--------------YSQMVVRGIPVDLVVYT 333
Query: 346 AVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRS 405
+++ + + FK L + PN TY ++ ++G+ + Q+
Sbjct: 334 VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Query: 406 GEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA 465
+P +TY ++ + K+G ++EAV +R+ME + V+ Y + L G+ + A
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 466 IPEVEKIRRL 475
I E+ K RL
Sbjct: 454 I-ELSKEMRL 462
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 116/272 (42%), Gaps = 29/272 (10%)
Query: 184 EVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQW 243
E R +V D ++ T ++RL K G G LLR +E + + ++V
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCK-GGKVLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Query: 244 VYNYKDHRKYQSRF-------------VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYP 290
++ +R + + VYT L+ L KA +EA + F ++ + V P
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV-P 362
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
++ Y ++ L +AG L I+ M +K + P++V Y++++N
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKS--------------VIPNVVTYSSMING 408
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
V + + ++++ + PNG TYG ++ ++G ++ EL ++R G
Sbjct: 409 YVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN 468
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV 442
LV + G++ E +++M +GV
Sbjct: 469 NYILDALVNHLKRIGRIKEVKGLVKDMVSKGV 500
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 131/285 (45%), Gaps = 20/285 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFN-LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
++ L+ K + EA ++++ +++ +ID PD+ Y S+ L E ++ E
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M K P++V YN ++ +K+ + +F+++ + GL N
Sbjct: 386 MISKD--------------CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ Q+G+ D+ ++F ++ G P+ +TY +L+ K GK+++A+ +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+K + Y + +C G+ +D + L +P + +T MI G
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGL 550
Query: 498 IDDCACIFECMK-DHCSPNIGTINTMLKVYGQN-DKFSKAKFLFE 540
++ +F MK D PN GT NT+++ ++ DK + A+ + E
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 182/474 (38%), Gaps = 96/474 (20%)
Query: 130 EKLKRESLNELK---------EMFQARKMDQLKWVFDDDIEINEHWYNESYGLLKRTQKR 180
EKL R L +LK EM Q+R + + +E N+ LL K
Sbjct: 49 EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSI-------VEFNK--------LLSAIAKM 93
Query: 181 SEVEVIRFLVERLSDREITTKDWKLSRLMKL----SGLPFTEGQLLRILEMLG------- 229
++ +++ L ER+ + I+ + + L+ S LP L ++++ LG
Sbjct: 94 NKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK-LGYEPDIVT 152
Query: 230 ----LRG-CWKQALSVVQWVYNYKDHRKYQSRFV-YTKLLAVLGKARRPKEALQIFNLM- 282
L G C + +S + + +YQ V + L+ L + EA+ + + M
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 283 -RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDI 341
RG PD+ Y ++ L + G + L++++ M++ IE D+
Sbjct: 213 ARG---CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK--------------IEADV 255
Query: 342 VIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQ 401
VIY +++A K +F ++ G++PN TY + G + L
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 402 IRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGR 461
+ P +T+ L+ F KEGK+ EA + EM KR + Y L C + R
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 462 W------------QDAIPEVEK----IRRLPRARPLE------------------VTFTG 487
+D P V I+ +A+ +E VT+
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 488 MIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
+I+ G D IF+ M D P+I T + +L + K KA +FE
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ L +A A +IF M + V PD+ Y + L + G L++ L + E +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSW-VFKQLKKSGLKPNG 376
QK K +EPDI YN ++ C K G W +F L G+KPN
Sbjct: 492 -QKSK-------------MEPDIYTYNIMIEGMCKAGKVEDG--WDLFCSLSLKGVKPNV 535
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
Y + + G + LF +++ G +P + TY L+R ++G + E I+E
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 437 MEKRGVIGTAS 447
M G +G AS
Sbjct: 596 MRSCGFVGDAS 606
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+PD + +++ + + Q+ + G +P+ TYG + + G+ DL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
L ++ + + + ++ + K V+ AV+ EME +G+ Y L CLC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
YGRW DA + + + P VTF +I + G + + + E M + P+
Sbjct: 305 NYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 517 GTINTMLKVYGQNDKFSKAKFLFE 540
T N ++ + +++ +AK +F+
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFK 387
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 130/331 (39%), Gaps = 54/331 (16%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
F +T L+ L + EA+ + + M RG PD+ Y ++ L + G + LN+
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRG---CQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
+ M+ I+ ++VI+N ++++ + + +F +++ G++P
Sbjct: 246 LNKMEAAR--------------IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
N TY + G + L + P +T+ L+ F+KEGK+ EA +
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 435 REMEKRGVIGTASVYYELACCLCYYGRW------------QDAIPEVE----------KI 472
EM +R + Y L C + R +D +P ++ K
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 473 RRLPRARPL------------EVTFTGMIKSSMDGGHIDDCACIFECMKDHCSP-NIGTI 519
+R+ L VT+T +I+ G D +F+ M + P +I T
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 520 NTMLKVYGQNDKFSKAKFLFEEVKVATSDFN 550
+ +L K A +F+ ++ + + N
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+ + + FKF SK+ P+I YN ++N K+ + +F+++ + GL N
Sbjct: 379 LDEAKQMFKFMVSKDC----LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP-EALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY ++ Q+G+ D +F Q+ S VP + +TY +L+ GK+D A+ +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
++K + +Y + +C G+ + E + +P VT+ MI
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGK----VGEAWDLFCSLSIKPDVVTYNTMISGLCSKR 549
Query: 497 HIDDCACIFECMK-DHCSPNIGTINTMLK 524
+ + +F MK D PN GT NT+++
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 119/270 (44%), Gaps = 24/270 (8%)
Query: 217 TEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEAL 276
+E ++RI+ + G G + A + + R +S + LL+ +++ EA+
Sbjct: 121 SEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKS---FNALLSAYVNSKKLDEAM 177
Query: 277 QIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTFKFKY---- 329
+ F + + + PD+ Y+++ L + G + ++L+I E +++ +P F
Sbjct: 178 KTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEE 237
Query: 330 ----------SKNWDPI----IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
+ WD + + P+I YN+ + +K++ + +K G+ P+
Sbjct: 238 FYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TY + N + V + + +++ G P+ +TY +L+ K+G +D AVE
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSE 357
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDA 465
E K ++ ++Y + L G+ +A
Sbjct: 358 EAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 22/289 (7%)
Query: 262 LLAVLGKARRPKEALQIFNLMRG------NIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
L+ L K+RR EAL++F MRG N+ + D ++++ L + G LKE ++
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNV-IKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
MK + + P+ V YN +++ + + + V ++K+ +KPN
Sbjct: 394 VRMKLEERCV-------------PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
T + + ++ F + + G +TY L+ V++A+
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
+M + G A +YY L LC R DAI VEK++ + L + + +I D
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL-LAYNMLIGLFCDK 559
Query: 496 GHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ + + M K+ P+ T NT++ +G++ F + + E+++
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 1/201 (0%)
Query: 329 YSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
Y K + PD IY A+++ ++ V ++LK+ G + Y + + +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
N + V+E+ + + G+ P+++TY L+ F K + + +M + G+ T +
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 449 YYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
Y + C G +A+ + + + P V + +I + G+ + E M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 509 K-DHCSPNIGTINTMLKVYGQ 528
K PN+ T N + K +
Sbjct: 679 KMKMVRPNVETYNALFKCLNE 699
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 131/313 (41%), Gaps = 32/313 (10%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
+ L+ L K R KEA ++ M+ P+ Y+ + +AG L+ +V M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 319 KQ---KPKTFKFK---------YSKNWDPI---------IEPDIVIYNAVLNACVPSKQW 357
K+ KP + N + ++ ++V Y +++AC
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 358 KGVSWVFKQLKKSGLKPNGAT-YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
+ + ++++ ++G P+ Y L + ++D + + +++ G + L Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR-VVEKLKEGGFSLDLLAYNM 551
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP 476
L+ F + ++ E + +MEK G + Y L + ++G+ +D VE++
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL---ISFFGKHKD-FESVERMMEQM 607
Query: 477 R---ARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH--CSPNIGTINTMLKVYGQNDK 531
R P T+ +I + G +D+ +F+ M H +PN N ++ + +
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 532 FSKAKFLFEEVKV 544
F +A L EE+K+
Sbjct: 668 FGQALSLKEEMKM 680
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 139/341 (40%), Gaps = 47/341 (13%)
Query: 217 TEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEAL 276
TE +L++L W QA W + + S Y ++ VLGK R
Sbjct: 131 TESLVLQVLRRFS--NGWNQAYGFFIWANSQTGY--VHSGHTYNAMVDVLGKCRNFDLMW 186
Query: 277 QIFNLMRGN---------------------------IDVYPDMAAYHSIAV-TLGQAGLL 308
++ N M N +D + +M + + T+ L+
Sbjct: 187 ELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLM 246
Query: 309 KELL--NIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQ 366
L+ N +E + + K +D I +PD +N +++ ++++ +
Sbjct: 247 DALVKENSIEHAHEV-------FLKLFDTI-KPDARTFNILIHGFCKARKFDDARAMMDL 298
Query: 367 LKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGK 426
+K + P+ TY +E + G++ V+E+ ++R +G P +TY +++ + K +
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 427 VDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFT 486
V EA+ +M++ G + A Y L L GR++DA E + R + V +
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLV-YN 417
Query: 487 GMIKSSMDGGHIDDCACIFECMKDH----CSPNIGTINTML 523
MI +++ + + + M+D CSPN+ T +L
Sbjct: 418 TMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT ++ LGK+++ EAL ++ M+ + PD Y S+ L + G K+ I E M
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKED-GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS---GLKPN 375
+ + D+++YN +++A + + + + K+++ PN
Sbjct: 405 TNQG--------------VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TY +++ L+ L + ++ + TY +L+R GKV+EA
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 436 EMEKRGVI 443
E ++G++
Sbjct: 511 EAVRKGMV 518
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
PD+ Y+A++NA + G +F ++ K GL PN + + ++G DL+ E
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 399 F------------------------------------GQIRRSGEVPEALTYKVLVRTFW 422
+ G IRR G P+ +TY L+ F
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR-GLRPDKITYTTLIDGFC 426
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRA--RP 480
+ G V+ A+E +EM++ G+ + L C +C GR DA +R + RA +P
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA---ERALREMLRAGIKP 483
Query: 481 LEVTFTGMIKSSMDGGHIDDCACIFECMKDHCS----PNIGTINTMLKVYGQNDKFSKAK 536
+VT+T M+ + G D F+ +K+ S P++ T N +L + + A
Sbjct: 484 DDVTYTMMMDAFCKKG---DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 537 FLFEEV 542
L + +
Sbjct: 541 MLLDAM 546
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 33/287 (11%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLM--RG---NIDVYPDMAAYHSIAVTLGQAGLLKEL 311
F Y+ L+ L K + A +F+ M RG N ++ + HS G+ L+KE
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN---GEIDLMKE- 366
Query: 312 LNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSG 371
Y K ++PDIV+YN ++N + + + + G
Sbjct: 367 ----------------SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 372 LKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAV 431
L+P+ TY ++ + G+ + E+ ++ ++G + + + LV KEG+V +A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRWQDA---IPEVEKIRRLPRARPLEVTFTGM 488
A+REM + G+ Y + C G Q + E++ +P V G+
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 489 IKSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSK 534
K G + + + + M + P+ T NT+L+ + ++ SK
Sbjct: 531 CKL----GQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 95/247 (38%), Gaps = 15/247 (6%)
Query: 213 GLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRP 272
G FT + L + + +A S+++ V + K S F+ + V
Sbjct: 113 GFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFL 172
Query: 273 KEALQIFNLMRGNIDVYPD------MAAYHSIAVTLGQAGLLKELLNIVECMKQKPK-TF 325
+AL I G I PD ++ H V + G L + + MK P T
Sbjct: 173 VDALMITYTDLGFI---PDAIQCFRLSRKHRFDVPIRGCGNLLDRM-----MKLNPTGTI 224
Query: 326 KFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEV 385
Y + D ++ ++N ++N VF ++ K L+P ++ +
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 386 TMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGT 445
+ GN D L Q+ +S P+ TY L+ KE K+D A EM KRG+I
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 446 ASVYYEL 452
++ L
Sbjct: 345 DVIFTTL 351
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 22/289 (7%)
Query: 262 LLAVLGKARRPKEALQIFNLMRG------NIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
L+ L K+RR EAL++F MRG N+ + D ++++ L + G LKE ++
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNV-IKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
MK + + P+ V YN +++ + + + V ++K+ +KPN
Sbjct: 394 VRMKLEERCV-------------PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
T + + ++ F + + G +TY L+ V++A+
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
+M + G A +YY L LC R DAI VEK++ + L + + +I D
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL-LAYNMLIGLFCDK 559
Query: 496 GHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ + + M K+ P+ T NT++ +G++ F + + E+++
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 1/201 (0%)
Query: 329 YSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
Y K + PD IY A+++ ++ V ++LK+ G + Y + + +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
N + V+E+ + + G+ P+++TY L+ F K + + +M + G+ T +
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 449 YYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
Y + C G +A+ + + + P V + +I + G+ + E M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 509 K-DHCSPNIGTINTMLKVYGQ 528
K PN+ T N + K +
Sbjct: 679 KMKMVRPNVETYNALFKCLNE 699
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 132/313 (42%), Gaps = 32/313 (10%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
+ L+ L K R KEA ++ M+ P+ Y+ + +AG L+ +V M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 319 KQ---KPKTFKFK---------YSKNWDPI---------IEPDIVIYNAVLNACVPSKQW 357
K+ KP + N + ++ ++V Y +++AC
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 358 KGVSWVFKQLKKSGLKPNGAT-YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
+ + ++++ ++G P+ Y L + ++D + + +++ G + L Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR-VVEKLKEGGFSLDLLAYNM 551
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP 476
L+ F + ++ E + +MEK G + Y L + ++G+ +D VE++
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL---ISFFGKHKD-FESVERMMEQM 607
Query: 477 RARPLEVTFT---GMIKSSMDGGHIDDCACIFECMKDH--CSPNIGTINTMLKVYGQNDK 531
R L+ T T +I + G +D+ +F+ M H +PN N ++ + +
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 532 FSKAKFLFEEVKV 544
F +A L EE+K+
Sbjct: 668 FGQALSLKEEMKM 680
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 130/286 (45%), Gaps = 19/286 (6%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
++K+L+ + K++ + +F+ M + D+ +Y+ + L + L++V
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEV-CGIGHDLYSYNIVINCLCRCSRFVIALSVV--- 127
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGA 377
K KF Y EPD+V ++++N C ++ + + V K +++ G +P+
Sbjct: 128 ---GKMMKFGY--------EPDVVTVSSLINGFCQGNRVFDAIDLVSK-MEEMGFRPDVV 175
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
Y ++ + + G + ELF ++ R G +A+TY LV G+ +A +R+M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
R ++ + + G++ +A+ E++ R P T+ +I G
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGR 294
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+D+ + + M C P++ T NT++ + ++ + + LF E+
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 23/257 (8%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
PD+ Y++I + GL+ + + + + M++ + D V YN+++
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG--------------VRADAVTYNSLVA 217
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
S +W + + + + + PN T+ ++V ++ G + +L+ ++ R P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ TY L+ G+VDEA + + M +G + Y L C R + E
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR----VDEG 333
Query: 470 EKIRRLPRARPL---EVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVY 526
K+ R R L +T+ +I+ G D IF M PNI T + +L
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--PNIRTYSILLYGL 391
Query: 527 GQNDKFSKAKFLFEEVK 543
N + KA LFE ++
Sbjct: 392 CMNWRVEKALVLFENMQ 408
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P IV ++ VL+ SK + V +F ++ G+ + +Y + + + + + +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
G++ + G P+ +T L+ F + +V +A++ + +ME+ G +Y + C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 459 YGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFE--CMKDHCSPNI 516
G DA+ +++ R R VT+ ++ G D A + M+D PN+
Sbjct: 187 IGLVNDAVELFDRMER-DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD-IVPNV 244
Query: 517 GTINTMLKVYGQNDKFSKAKFLFEEV 542
T ++ V+ + KFS+A L+EE+
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEM 270
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 95/231 (41%), Gaps = 15/231 (6%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y ++ K +A+++F+ M + V D Y+S+ L +G + ++
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M + I P+++ + AV++ V ++ +++++ + + P+
Sbjct: 235 MVMRD--------------IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + G D ++ + G +P+ +TY L+ F K +VDE + REM
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGM 488
+RG++G Y + GR A ++ P R + G+
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 21/233 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLM-RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+T ++ V K + EA++++ M R +D PD+ Y+S+ L G + E +++
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M K PD+V YN ++N SK+ + +F+++ + GL +
Sbjct: 305 MVTKGCL--------------PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ Q+G D E+F R P TY +L+ +V++A+ M
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIK 490
+K + + Y + +C G +DA ++ + +P V++T MI
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAW-DLFRSLSCKGLKPDVVSYTTMIS 459
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 110/288 (38%), Gaps = 57/288 (19%)
Query: 288 VYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAV 347
VYPD+ Y+++ GL++E ++ M K P + YN V
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG--------------FSPGVYTYNTV 311
Query: 348 LNACVPSKQWKGVSWVFKQLKKSGLKPNGATY-GLAMEVT-------------------- 386
+N +++ VF ++ +SGL P+ TY L ME
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 387 --------------MQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
+SGN D F ++ +G +P+ + Y +L++ + ++G + A+
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 433 AIREMEKRGVIGTASVYYELACCLC---YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMI 489
EM ++G Y + LC G E+ + P + L + G
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 490 KSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSKAK 536
K G++ + +F+ MK+ ++ T NT+L +G+ AK
Sbjct: 492 KL----GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSW-VFKQLKKSGLKPNG 376
+++ + F SK + I+ NA++ + V W ++W V++++ +SG+ N
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDA----CNALIGSLV-RIGWVELAWGVYQEISRSGVGINV 235
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
T + + + G + V Q++ G P+ +TY L+ + +G ++EA E +
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
M +G Y + LC +G+++ A ++ R P T+ ++ + G
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR-SGLSPDSTTYRSLLMEACKKG 354
Query: 497 HIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
+ + +F M+ P++ ++M+ ++ ++ KA F VK A
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 114/278 (41%), Gaps = 17/278 (6%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
++ ++++ ++ +AL FN ++ + PD Y + + G++ +N+ M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVK-EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
Q+ D+V YN +L+ K +F ++ + L P+ T
Sbjct: 437 LQQGCAM--------------DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
+ ++ + GN ELF +++ + +TY L+ F K G +D A E +M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
+ ++ T Y L LC G +A +++ +P + MIK G+
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNA 601
Query: 499 DDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKA 535
D E M + P+ + NT++ + + + SKA
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 19/233 (8%)
Query: 267 GKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFK 326
GK R KE ++R + PD Y S+ + + G ++VE K F
Sbjct: 319 GKYERAKEVFA--EMLRSGLS--PDSTTYRSLLMEACKKG------DVVE----TEKVFS 364
Query: 327 FKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVT 386
S++ + PD+V ++++++ S F +K++GL P+ Y + ++
Sbjct: 365 DMRSRD----VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 387 MQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTA 446
+ G + L ++ + G + +TY ++ K + EA + EM +R + +
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 447 SVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHID 499
L C G Q+A+ +K++ R R VT+ ++ G ID
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKE-KRIRLDVVTYNTLLDGFGKVGDID 532
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 22/289 (7%)
Query: 262 LLAVLGKARRPKEALQIFNLMRG------NIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
L+ L K+RR EAL++F MRG N+ + D ++++ L + G LKE ++
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNV-IKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
MK + + P+ V YN +++ + + + V ++K+ +KPN
Sbjct: 394 VRMKLEERC-------------APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
T + + ++ F + + G +TY L+ V++A+
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
+M + G A +YY L LC R DAI VEK++ + L + + +I D
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL-LAYNMLIGLFCDK 559
Query: 496 GHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ + + M K+ P+ T NT++ +G++ F + + E+++
Sbjct: 560 NNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 1/201 (0%)
Query: 329 YSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
Y K + PD IY A+++ ++ V ++LK+ G + Y + + +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
N + V+E+ + + G+ P+++TY L+ F K + + +M + G+ T +
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 449 YYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
Y + C G +A+ + + + P V + +I + G+ + E M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 509 K-DHCSPNIGTINTMLKVYGQ 528
K PN+ T N + K +
Sbjct: 679 KMKMVRPNVETYNALFKCLNE 699
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I D+ + +++ + V ++ K G +P+ T+G +
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
L + +SG P + Y L+ K G+++ A+E + EMEK+G+ Y L L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPN 515
CY GRW DA + + + P VTFT +I + G++D+ ++ E ++ PN
Sbjct: 222 CYSGRWSDAARMLRDMMK-RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFE 540
T N+++ + + AK F+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFD 305
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
EP++V+YN +++ + + + +++K GL + TY + SG +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
+ + + P+ +T+ L+ F K+G +DEA E +EM + V Y + LC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNI 516
+GR DA + + P VT+ +I +D+ +F+ M + + +I
Sbjct: 293 MHGRLYDAKKTFDLMAS-KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 517 GTINTMLKVYGQNDKFSKAKFLF 539
T NT++ Y Q K A +F
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIF 374
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 112/289 (38%), Gaps = 19/289 (6%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
VY L+ L K AL++ N M + D+ Y+++ L +G + ++
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M ++ I PD+V + A+++ V ++K++ +S + PN
Sbjct: 237 MMKRS--------------INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + G + F + G P +TY L+ F K VDE ++ + M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
G Y L C G+ + A+ ++ R P +T ++ G
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVAL-DIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 498 IDDCACIFECMKDHCSPNIGTI--NTMLKVYGQNDKFSKAKFLFEEVKV 544
I+ F+ M++ IG + N M+ + DK KA LF + V
Sbjct: 402 IESALVKFDDMRES-EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 338 EPDIVIYNAVLN-ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+PD+ YN ++N C K+ V ++ + K GL PN +Y ++ +S YD+
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFL-DEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+L Q+ G P+ +TY +L+ G +D+AV ++ RGV A++Y L L
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 457 CYYGRWQDA---IPEVEKIRRLPRARPLEVTFTGMIKS 491
C GR+ A E+ LP A G I+S
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+PDIV Y +++ V S + +L G+ P+ A Y + M ++G +
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
LF ++ +P+A Y L+ F + G DEA + ++GV + + C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
G +A+ + ++ P + T++ +I + + IF M K+ C PN+
Sbjct: 532 RSGMLDEALACMNRMNE-EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNV 590
Query: 517 GTINTMLKVYGQNDKFSKAKFLFEEVKV 544
T +++ + F A+ F+E+++
Sbjct: 591 VTYTSLINGFCCQGDFKMAEETFKEMQL 618
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 85/191 (44%), Gaps = 6/191 (3%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+ PD IYN +++ + ++ +F ++ + P+ Y ++ ++SG++D
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
++F G + + + +++ F + G +DEA+ + M + ++ Y + +
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI---I 562
Query: 457 CYYGRWQDAIPEVEKIRRLP--RARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCS 513
Y + QD ++ R + + +P VT+T +I G F+ M+
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622
Query: 514 PNIGTINTMLK 524
PN+ T T+++
Sbjct: 623 PNVVTYTTLIR 633
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 17/241 (7%)
Query: 288 VYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAV 347
V PD A Y+ + L + G + P K +S+ D I PD +Y +
Sbjct: 446 VSPDAAIYNMLMSGLCKTG------------RFLPA--KLLFSEMLDRNILPDAYVYATL 491
Query: 348 LNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGE 407
++ + S + VF + G+K + + ++ +SG D ++
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 408 VPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIP 467
VP+ TY ++ + K+ + A++ R MEK Y L C G ++ A
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA-E 610
Query: 468 EVEKIRRLPRARPLEVTFTGMIKS-SMDGGHIDDCACIFEC-MKDHCSPNIGTINTMLKV 525
E K +L P VT+T +I+S + + ++ +E M + C PN T N +L+
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Query: 526 Y 526
+
Sbjct: 671 F 671
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 137/297 (46%), Gaps = 33/297 (11%)
Query: 256 RFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
R ++ ++ + KA +EA + +M D+ PD+ L +++L I
Sbjct: 593 RIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVY-------------LFRDMLRIY 639
Query: 316 E-C-MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLK 373
+ C ++ K + ++ K+ I + +YN V+N C + +S F+++ + G
Sbjct: 640 QKCDLQDKLQHLYYRIRKSG---IHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFT 696
Query: 374 PNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
PN T+ + ++V ++ + V+ELF +R G V + ++Y ++ + K A
Sbjct: 697 PNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNKDYTNMSSA 755
Query: 434 IREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPR------ARPLEVTFTG 487
I+ M+ G + Y L L YG+ + ++EK R + + + P T+
Sbjct: 756 IKNMQFDGFSVSLEAYNTL---LDAYGKDK----QMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 488 MIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
MI + G ID+ A + + +K+ P++ + NT++K YG +A L +E++
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 233 CWKQALSVVQWVYNYKDHRKYQ---SRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVY 289
C +AL + + +++ +Y + + LL V GKA+ K+ ++F L + + V
Sbjct: 673 CCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV- 731
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
D+ +Y++I G+ K+ N M K +F + +E YN +L+
Sbjct: 732 -DVISYNTIIAAYGKN---KDYTN----MSSAIKNMQFD---GFSVSLEA----YNTLLD 776
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
A KQ + + K++KKS P+ TY + + + + G D V ++ +++ SG P
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGP 836
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ +Y L++ + G V+EAV ++EM R +I Y L L
Sbjct: 837 DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
P+I+ YN ++ + + +F +L GL+P+ +Y +E ++ NY+
Sbjct: 345 FSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAK 404
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG-----VIGTASVYYE 451
+ +++R G P + L+ K G D A++ I +M G ++G YE
Sbjct: 405 HYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYE 464
Query: 452 LACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDC 501
+ D +P V K R + +F+ ++ + + G +DDC
Sbjct: 465 KVGKI-------DVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDC 507
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/152 (18%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D++ YN ++ A +K + +S K ++ G + Y ++ + + +
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSIL 791
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
++++S P+ TY +++ + ++G +DE + ++E+++ G+ Y L
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
G ++A+ V+++R P +VT+T ++ +
Sbjct: 852 GMVEEAVGLVKEMRG-RNIIPDKVTYTNLVTA 882
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 30/258 (11%)
Query: 220 QLLRILEMLGLRG------------CWKQALSVVQWVYNYKDHRKYQSRFV-YTKLLAVL 266
+LL+ +E LG R C K LS + N Q V + L+
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 267 GKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFK 326
+A + +EA ++F M+ ++V P+ Y+++ Q G F+
Sbjct: 319 CRAMKLQEASKVFGEMKA-VNVAPNTVTYNTLINGYSQQG-------------DHEMAFR 364
Query: 327 FKYSKNWDPIIEPDIVIYNA-VLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEV 385
F Y I+ DI+ YNA + C +K K +V K+L K L PN +T+ +
Sbjct: 365 F-YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV-KELDKENLVPNSSTFSALIMG 422
Query: 386 TMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGT 445
N D EL+ + RSG P T+ +LV F + D A + +REM +R +
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Query: 446 ASVYYELACCLCYYGRWQ 463
+ +++ L + G+ Q
Sbjct: 483 SRTVHQVCNGLKHQGKDQ 500
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 2/201 (0%)
Query: 343 IYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
+++++ K+++ + F Q+K G P + M + G D+ + ++
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW 462
RR P T +++ + + GK+D+ +E +++ME+ G T Y L C G
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 463 QDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINT 521
A+ +++ + +P VTF +I + + + +F MK + +PN T NT
Sbjct: 290 SSAL-KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 522 MLKVYGQNDKFSKAKFLFEEV 542
++ Y Q A +E++
Sbjct: 349 LINGYSQQGDHEMAFRFYEDM 369
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
Query: 367 LKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGK 426
+ KSGL+PN T+ + ++ ++FG+++ P +TY L+ + ++G
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 427 VDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA---IPEVEKIRRLPRARPLEV 483
+ A +M G+ Y L LC + + A + E++K +P +
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS---- 414
Query: 484 TFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
TF+ +I + D +++ M + C PN T N ++ + +N+ F A + E+
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 30/258 (11%)
Query: 220 QLLRILEMLGLRG------------CWKQALSVVQWVYNYKDHRKYQSRFV-YTKLLAVL 266
+LL+ +E LG R C K LS + N Q V + L+
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 267 GKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFK 326
+A + +EA ++F M+ ++V P+ Y+++ Q G F+
Sbjct: 319 CRAMKLQEASKVFGEMKA-VNVAPNTVTYNTLINGYSQQG-------------DHEMAFR 364
Query: 327 FKYSKNWDPIIEPDIVIYNA-VLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEV 385
F Y I+ DI+ YNA + C +K K +V K+L K L PN +T+ +
Sbjct: 365 F-YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV-KELDKENLVPNSSTFSALIMG 422
Query: 386 TMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGT 445
N D EL+ + RSG P T+ +LV F + D A + +REM +R +
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Query: 446 ASVYYELACCLCYYGRWQ 463
+ +++ L + G+ Q
Sbjct: 483 SRTVHQVCNGLKHQGKDQ 500
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 2/201 (0%)
Query: 343 IYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
+++++ K+++ + F Q+K G P + M + G D+ + ++
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW 462
RR P T +++ + + GK+D+ +E +++ME+ G T Y L C G
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 463 QDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINT 521
A+ +++ + +P VTF +I + + + +F MK + +PN T NT
Sbjct: 290 SSAL-KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 522 MLKVYGQNDKFSKAKFLFEEV 542
++ Y Q A +E++
Sbjct: 349 LINGYSQQGDHEMAFRFYEDM 369
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
Query: 367 LKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGK 426
+ KSGL+PN T+ + ++ ++FG+++ P +TY L+ + ++G
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 427 VDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA---IPEVEKIRRLPRARPLEV 483
+ A +M G+ Y L LC + + A + E++K +P +
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS---- 414
Query: 484 TFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
TF+ +I + D +++ M + C PN T N ++ + +N+ F A + E+
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 254 QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLN 313
S + Y ++ L KARR + A M+ + P++ +++ G +K++
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDR-GISPNLVTFNTFLSGYSVRGDVKKVHG 481
Query: 314 IVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLK 373
++E K FK PD++ ++ ++N +K+ K FK++ + G++
Sbjct: 482 VLE----KLLVHGFK----------PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 374 PNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
PN TY + + +G+ D +LF +++ +G P+ Y +++F K KV +A E
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 434 IREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR 474
++ M + G+ Y L L GR +A I R
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 351 CVPSKQW------KGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRR 404
CV W K + VF Q+ G+KP+ Y ++ ++S + DL + F Q+R
Sbjct: 149 CVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRS 208
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
G P+ TY +L+ K+G VDEA+ +++ME+ G Y L GR +
Sbjct: 209 DGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDE 268
Query: 465 AIPEVEKIRRLPRARPLEVT 484
A+ ++E + R+ + P E T
Sbjct: 269 ALKQLEMM-RVRKLNPNEAT 287
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
++P +YNAV++A V S F+Q++ G KP+ TY + + + G D
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAI 235
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKR 440
L Q+ + G P TY +L+ F G+VDEA++ + M R
Sbjct: 236 RLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVR 279
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 35/247 (14%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P++VIYN V+N ++ VF ++K G++ + TY + SG + L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
+ + P + + L+ TF KEG + EA +EM +R V+ Y L C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 459 YGRWQDA------------IPEVE----------KIRRLPRARPL--EVTFTGMIKSSM- 493
+G DA P+V K +R+ L E+T+ G++ +
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 494 ---------DGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
G ++ +F M D SP+I T N +L N K KA + E+++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 544 VATSDFN 550
+ D +
Sbjct: 422 KSEMDVD 428
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 117/286 (40%), Gaps = 17/286 (5%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y ++ L K R AL++F M + D Y+++ L +G + ++
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M ++ I+P+++ + A+++ V ++K++ + + PN
Sbjct: 245 MVKRK--------------IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + G +F + G P+ +TY L+ F K +V++ ++ EM
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+G++G A Y L C G+ A ++ P VT+ ++ + G
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG-VSPDIVTYNILLDCLCNNGK 409
Query: 498 IDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
I+ + E + K +I T N +++ + DK +A LF +
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 366 QLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEG 425
++ K G +P+ T G + Q + L + G VP + Y ++ K
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 426 KVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV-EKIRRLPRARPLEVT 484
++ A+E MEK+G+ A Y L L GRW DA + + ++R + P +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR--KIDPNVIF 256
Query: 485 FTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
FT +I + + G++ + ++ E ++ PN+ T N+++ + + AK++F+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 345 NAVLNACVPSKQWKGVSW-VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
N +L+ V + + ++ +FK + G+ PN +Y L M+ + + + ++LFG++
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQ 463
VP+ +YK+L++ F ++G+V+ A+E + +M +G + Y L LC + +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 464 DAIPEVEKIRRLPRARPLEVTFTGMI------KSSMDGGHIDDCACIFECMKDHCSPNIG 517
+A + ++ +L P V + MI +MD + D + + + CSPN
Sbjct: 278 EAYKLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDARKVLD-----DMLSNGCSPNSV 331
Query: 518 TINTMLKVYGQNDKFSKAKFLFEEV 542
+ T++ F + K EE+
Sbjct: 332 SYRTLIGGLCDQGMFDEGKKYLEEM 356
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y +L+ G+A KEA+ +FN M+ PD Y ++ +AG L +++ +
Sbjct: 396 TYNRLIHSYGRANYLKEAMNVFNQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR 454
Query: 318 MKQ---KPKTFKFKYSKNW------------------DPIIEPDIVIYNAVLNACVPSKQ 356
M++ P TF + N P++V +N ++ ++
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
++ +++ ++ +G +P+ TY + MEV G + +F +++R VP+ Y +
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGL 574
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGV 442
LV + K G VD+A + + M + G+
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAMLQAGL 600
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 143/330 (43%), Gaps = 28/330 (8%)
Query: 225 LEMLGLRGCWKQALSVVQWVYNYKDHRKY------QSRF-----VYTKLLAVLGKARRPK 273
L G R QA V++ + NY + + Q F YT ++ LG+A++
Sbjct: 317 LHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 376
Query: 274 EALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNW 333
E ++ + M + P+ Y+ + + G+A LKE +N+ M++
Sbjct: 377 EINKLLDEMVRD-GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAG----------- 424
Query: 334 DPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYD 393
EPD V Y +++ + ++++++++GL P+ TY + + ++G+
Sbjct: 425 ---CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 394 LVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELA 453
H LF ++ G P +T+ +++ K + A++ R+M+ G Y +
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 454 CCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHC 512
L + G ++A +++R P E + ++ G++D ++ M +
Sbjct: 542 EVLGHCGFLEEAEGVFAEMQR-KNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 513 SPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
PN+ T N++L + + + S+A L + +
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
Query: 344 YNAVLNACVPSKQWKGVSWVFKQLK-KSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
+NA+LNACV SK++ V +FK+L K ++P+ A+Y ++ G++ L +I
Sbjct: 144 FNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEI 203
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW 462
G P+ +T+ +L+ + +GK +E + M ++ V Y L +
Sbjct: 204 ENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKS 263
Query: 463 QDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINT 521
++ + +K++ +P TFT MIK + G +D+ + E K+ C P N+
Sbjct: 264 EEMVSLFDKLKG-NELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNS 322
Query: 522 ML 523
+L
Sbjct: 323 LL 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 119/254 (46%), Gaps = 29/254 (11%)
Query: 218 EGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQ-SRFVYTKLLAVLGKARRPKEAL 276
EG + RI+ + G G ++ A Q V++ R + + + LL +++
Sbjct: 106 EGFVARIINLYGRVGMFENA----QKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVE 161
Query: 277 QIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPI 336
IF + G + + PD+A+Y+++ L G E + +++ ++ K
Sbjct: 162 GIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKG-------------- 207
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATY-----GLAMEVTMQSGN 391
++PD + +N +L+ +++ ++ ++ + +K + +Y GLAME + +
Sbjct: 208 LKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAME----NKS 263
Query: 392 YDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYE 451
++V LF +++ + P+ T+ +++ F EGK+DEA+ +E+EK G V+
Sbjct: 264 EEMVS-LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNS 322
Query: 452 LACCLCYYGRWQDA 465
L +C G + A
Sbjct: 323 LLPAICKAGDLESA 336
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 23/259 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y +L+ G+A EA+ +FN M+ PD Y ++ +AG L +++ +
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 318 MKQ---KPKTFKFKYSKNW------------------DPIIEPDIVIYNAVLNACVPSKQ 356
M+ P TF + N D P++V YN +++ ++
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
++ +++ ++ +G +P+ TY + MEV G + +F ++++ +P+ Y +
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP 476
LV + K G V++A + + M G+ L + +A ++ + L
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL- 638
Query: 477 RARPLEVTFTGMIKSSMDG 495
RP T+T ++ DG
Sbjct: 639 GLRPSLQTYTLLLSCCTDG 657
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 33/257 (12%)
Query: 225 LEMLGLRGCWKQALSVVQWVYNYKDHRKY------QSRF-----VYTKLLAVLGKARRPK 273
L+ LGLR QA V++ + +Y + + Q F YT ++ LG+A++
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 381
Query: 274 EALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTFKF--- 327
++ + M + P+ Y+ + + G+A L E +N+ M++ KP +
Sbjct: 382 AINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 328 ---------------KYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGL 372
Y + + PD Y+ ++N + +F ++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 373 KPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
PN TY + M++ ++ NY +L+ ++ +G P+ +TY +++ G ++EA
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 433 AIREMEKRGVIGTASVY 449
EM+++ I VY
Sbjct: 561 VFTEMQQKNWIPDEPVY 577
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
++ G K +G TY + ++ + +++L ++ R G P +TY L+ ++ + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTG 487
+EA+ +M++ G Y L G A+ +++ + P T++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSV 474
Query: 488 MIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
+I GH+ +F M D C+PN+ T N M+ ++ + + A L+ +++ A
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 23/259 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y +L+ G+A EA+ +FN M+ PD Y ++ +AG L +++ +
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 318 MKQ---KPKTFKFKYSKNW------------------DPIIEPDIVIYNAVLNACVPSKQ 356
M+ P TF + N D P++V YN +++ ++
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
++ +++ ++ +G +P+ TY + MEV G + +F ++++ +P+ Y +
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP 476
LV + K G V++A + + M G+ L + +A ++ + L
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL- 638
Query: 477 RARPLEVTFTGMIKSSMDG 495
RP T+T ++ DG
Sbjct: 639 GLRPSLQTYTLLLSCCTDG 657
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 33/257 (12%)
Query: 225 LEMLGLRGCWKQALSVVQWVYNYKDHRKY------QSRF-----VYTKLLAVLGKARRPK 273
L+ LGLR QA V++ + +Y + + Q F YT ++ LG+A++
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 381
Query: 274 EALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTFKF--- 327
++ + M + P+ Y+ + + G+A L E +N+ M++ KP +
Sbjct: 382 AINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 328 ---------------KYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGL 372
Y + + PD Y+ ++N + +F ++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 373 KPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
PN TY + M++ ++ NY +L+ ++ +G P+ +TY +++ G ++EA
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 433 AIREMEKRGVIGTASVY 449
EM+++ I VY
Sbjct: 561 VFTEMQQKNWIPDEPVY 577
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
++ G K +G TY + ++ + +++L ++ R G P +TY L+ ++ + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTG 487
+EA+ +M++ G Y L G A+ +++ + P T++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSV 474
Query: 488 MIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
+I GH+ +F M D C+PN+ T N M+ ++ + + A L+ +++ A
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 23/259 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y +L+ G+A EA+ +FN M+ PD Y ++ +AG L +++ +
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 318 MKQ---KPKTFKFKYSKNW------------------DPIIEPDIVIYNAVLNACVPSKQ 356
M+ P TF + N D P++V YN +++ ++
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
++ +++ ++ +G +P+ TY + MEV G + +F ++++ +P+ Y +
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP 476
LV + K G V++A + + M G+ L + +A ++ + L
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL- 638
Query: 477 RARPLEVTFTGMIKSSMDG 495
RP T+T ++ DG
Sbjct: 639 GLRPSLQTYTLLLSCCTDG 657
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 33/257 (12%)
Query: 225 LEMLGLRGCWKQALSVVQWVYNYKDHRKY------QSRF-----VYTKLLAVLGKARRPK 273
L+ LGLR QA V++ + +Y + + Q F YT ++ LG+A++
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 381
Query: 274 EALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ---KPKTFKF--- 327
++ + M + P+ Y+ + + G+A L E +N+ M++ KP +
Sbjct: 382 AINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 328 ---------------KYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGL 372
Y + + PD Y+ ++N + +F ++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 373 KPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
PN TY + M++ ++ NY +L+ ++ +G P+ +TY +++ G ++EA
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 433 AIREMEKRGVIGTASVY 449
EM+++ I VY
Sbjct: 561 VFTEMQQKNWIPDEPVY 577
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
++ G K +G TY + ++ + +++L ++ R G P +TY L+ ++ + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTG 487
+EA+ +M++ G Y L G A+ +++ + P T++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSV 474
Query: 488 MIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
+I GH+ +F M D C+PN+ T N M+ ++ + + A L+ +++ A
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 130/344 (37%), Gaps = 61/344 (17%)
Query: 255 SRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
S FV+ L A +R ++L+ FN R N P Y +A +L + + I
Sbjct: 77 SEFVFRVLRAT---SRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKI 133
Query: 315 VECMKQ-----KPKTFKF---KYSKNW--DPIIE------------PDIVIYNAVLNACV 352
++ MK +T F +Y KN D +E + +YN++L+A
Sbjct: 134 LKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALC 193
Query: 353 PSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEAL 412
K + G + +++ + GLKP+ TY + + +G E ++ R G P A
Sbjct: 194 DVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPAR 253
Query: 413 TYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVY-------------------YELA 453
+L+ G ++ A E + +M K G + + Y A
Sbjct: 254 GRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTA 313
Query: 454 C--CLCY-YGRWQDAIPEVEKIRRLPRA------------RPLEVTFTGMIKSSMDGGHI 498
C LC ++ IP V KI ++ A +P + +IK G
Sbjct: 314 CKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMF 373
Query: 499 DDCACIFECMKDHCSPNIGTINTML-KVYGQNDKF-SKAKFLFE 540
DD F MK P + TML + G+ KF A +L E
Sbjct: 374 DDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 417
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 26/304 (8%)
Query: 203 WKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKL 262
WK+ + MK L + L I+E G G QA+ + V K Q+ VY L
Sbjct: 131 WKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGV--PKTLGCQQTVDVYNSL 188
Query: 263 LAVLGKARRPKEALQIFNLMRGNI--DVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ 320
L L + A + L+R I + PD Y + AG +KE ++ M +
Sbjct: 189 LHALCDVKMFHGA---YALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 321 KPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYG 380
+ ++P ++ +LNA + VS ++ K G P+ T+
Sbjct: 246 ----------RGFNPPARGRDLLIEGLLNAGYLESAKEMVS----KMTKGGFVPDIQTFN 291
Query: 381 LAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKR 440
+ +E +SG + E++ + G + TYK L+ K GK+DEA + +
Sbjct: 292 ILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED 351
Query: 441 GVIGTASVYYELACCLCYYGRWQDAIPEVE--KIRRLPRARPLEVTFTGMIKSSMDGGHI 498
G S+Y + +C G + DA K++ P RP+ +T +I GG
Sbjct: 352 GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPV---YTMLITMCGRGGKF 408
Query: 499 DDCA 502
D A
Sbjct: 409 VDAA 412
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 101/213 (47%), Gaps = 9/213 (4%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
E +++ YN +L + +W+ V ++ ++ + G+KP +TYG ++V + G VH
Sbjct: 184 ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLK--VHA 241
Query: 398 L--FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM---EKRGVIGTASVYYEL 452
L G++ + G P+ +T ++++ + K + +A E ++ E + Y
Sbjct: 242 LCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTY 301
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRAR--PLEVTFTGMIKSSMDGGHIDDCACIFECMKD 510
+ YG+ E +R+ P VTF MI + G + + + + MK
Sbjct: 302 NTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKL 361
Query: 511 HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
HC+P+ T N ++ ++ +N+ +A F+E+K
Sbjct: 362 HCAPDTRTYNILISLHTKNNDIERAGAYFKEMK 394
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 103/239 (43%), Gaps = 29/239 (12%)
Query: 287 DVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ------------------------KP 322
++ PD+ Y + G +++ ++ VE MK+ +
Sbjct: 605 NIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Query: 323 KTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLA 382
+ K ++ + PD+ N ++N + +F +K+ G + N T+ +
Sbjct: 665 EAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMM 723
Query: 383 MEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV 442
+ + ++G ++ ++ Q+R + + L+Y ++ F +G+ EAVE +EM G+
Sbjct: 724 LCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI 783
Query: 443 IGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDC 501
S + L L G + A+ ++E+IR+ R LE+ + + SS+ G I DC
Sbjct: 784 QPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTL--SSLVG--IGDC 838
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 157/392 (40%), Gaps = 49/392 (12%)
Query: 157 DDDIEINEHWYNESYGLLKRTQKRSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPF 216
DD++EI+E+ ++ + R VE E+ K W + ++G
Sbjct: 430 DDNVEIDEY---------------TQSALTRMYVEA----EMLEKSWSWFKRFHVAGNMS 470
Query: 217 TEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEAL 276
+EG I + G RG LS + V+ ++ Y ++ G ++ ++A
Sbjct: 471 SEGYSANI-DAYGERG----YLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKAC 525
Query: 277 QIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPI 336
++F M + V PD Y+++ L A + + +E M++
Sbjct: 526 ELFESMM-SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYV------------ 572
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
D + Y AV+++ V Q V+K++ + ++P+ YG+ + +GN
Sbjct: 573 --SDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
++ +G ++ Y L++ + K G +DEA R++ + Y C +
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 457 CYYG-----RWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD- 510
Y R +AI + K R E TF M+ G ++ I + M++
Sbjct: 691 NLYSERSMVRKAEAIFDSMK----QRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 511 HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ + N++L ++ + +F +A F+E+
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEM 778
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 16/243 (6%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
V+ L +VL +EA+Q F+ M+ V+P + + + + G
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMK-RFRVFPKTRSCNGLLHRFAKLG----------- 241
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
K K + P + YN +++ + +F+++K GL P+
Sbjct: 242 ---KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY ++ + G D F +++ P+ +TY L+ F K GK+ +E REM
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+ G+ Y L C G Q AI +RR+ P E T+T +I ++ G+
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGN 417
Query: 498 IDD 500
+ D
Sbjct: 418 LSD 420
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 16/213 (7%)
Query: 250 HRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDV-YPDMAAYHSIAVTLGQAGLL 308
H + +R +Y +VL + K +F+++ +V P + ++ L G+L
Sbjct: 150 HILFCAR-MYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGML 208
Query: 309 KELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLK 368
+E ++C K K F+ + P N +L+ + V FK +
Sbjct: 209 EE---AIQCF-SKMKRFR----------VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 369 KSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVD 428
+G +P TY + ++ + G+ + LF +++ G VP+ +TY ++ F K G++D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 429 EAVEAIREMEKRGVIGTASVYYELACCLCYYGR 461
+ V EM+ Y L C C +G+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 103/241 (42%), Gaps = 17/241 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT L+ L A R KEA ++F M V P++A+Y+++ +A + L ++ +
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
K + I+PD+++Y + ++ + V ++K+ G+K N
Sbjct: 499 KGRG--------------IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y M+ +SGN L +++ +T+ VL+ K V +AV+ +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 439 KR-GVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
G+ A+++ + LC + + A E++ + P +T ++ + G+
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ-KGLVPDRTAYTSLMDGNFKQGN 663
Query: 498 I 498
+
Sbjct: 664 V 664
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+P++ +YN V+N V S ++++ K KP+ T+ + + +S +DL +
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
LF +++ G P +++ L+R F GK++E V+ EM + G + + L LC
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 458 YYGRWQDA 465
GR DA
Sbjct: 310 REGRVDDA 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 124/284 (43%), Gaps = 20/284 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
++ + +AR+ AL F+ M+ ID P++ Y+++ ++G + + L +
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 318 M-KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M K++ K PD+ +N ++N S ++ +F+++K+ G +PN
Sbjct: 219 MGKERAK---------------PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNV 263
Query: 377 ATYGLAMEVTMQSGNYDL-VHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
++ + + SG + V + I EA T ++LV +EG+VD+A +
Sbjct: 264 VSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEA-TCEILVDGLCREGRVDDACGLVL 322
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
++ + V+ + Y L LC + A+ +E++ + + P + T +++
Sbjct: 323 DLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQT-PCFIACTTLVEGLRKS 381
Query: 496 GHIDDCACIFE-CMKDHCSPNIGTINTMLKVYGQNDKFSKAKFL 538
G + + E M P+ T N +L+ +D + A L
Sbjct: 382 GRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 151/372 (40%), Gaps = 28/372 (7%)
Query: 185 VIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWV 244
V+ + + K W+L MK G+ ++ L G K+A SV+
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL--- 329
Query: 245 YNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNL--MRGNIDVYP----------DM 292
+ K Q + ++ K +P+EA+++ + +R NI VY DM
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDM 389
Query: 293 AAYHSIAVTLGQAGLLKELLNIVE-----C-MKQKPKTFKF--KYSKNWDPIIEPDIVIY 344
+I + + GLL + + C + + K F++ K+ +P P +
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP---PSLTTS 446
Query: 345 NAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRR 404
++ AC VF+ +K GLK + TY M ++ + V EL ++R
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
+G P+ TY +L+ + G +DEA E I E+ +RG + + + ++ G +Q+
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 465 AIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTML 523
A + L R +P VT + ++ ++ +F + D P++ NT++
Sbjct: 567 AFILWFYMADL-RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 524 KVYGQNDKFSKA 535
Y KA
Sbjct: 626 HGYCSVGDIEKA 637
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 151/372 (40%), Gaps = 28/372 (7%)
Query: 185 VIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWV 244
V+ + + K W+L MK G+ ++ L G K+A SV+
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL--- 329
Query: 245 YNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNL--MRGNIDVYP----------DM 292
+ K Q + ++ K +P+EA+++ + +R NI VY DM
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDM 389
Query: 293 AAYHSIAVTLGQAGLLKELLNIVE-----C-MKQKPKTFKF--KYSKNWDPIIEPDIVIY 344
+I + + GLL + + C + + K F++ K+ +P P +
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP---PSLTTS 446
Query: 345 NAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRR 404
++ AC VF+ +K GLK + TY M ++ + V EL ++R
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
+G P+ TY +L+ + G +DEA E I E+ +RG + + + ++ G +Q+
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 465 AIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTML 523
A + L R +P VT + ++ ++ +F + D P++ NT++
Sbjct: 567 AFILWFYMADL-RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 524 KVYGQNDKFSKA 535
Y KA
Sbjct: 626 HGYCSVGDIEKA 637
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 2/204 (0%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D V YN +++ C K+ ++ K GLKP+ TY + + + + +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
+R+G +P+ TY V++ K + +E E EM + V VY L C
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGT 518
GR A+ E ++ P T+T +IK +++ +FE M+ + PN+
Sbjct: 659 GRLSMALELREDMKH-KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 519 INTMLKVYGQNDKFSKAKFLFEEV 542
++ YG+ + K + L E+
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREM 741
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+++T + K + +EA+++F+ M V P++ ++++ LG G E
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDE------ 313
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
F FK K + +EP ++ Y+ ++ +K+ +V K++ K G PN
Sbjct: 314 -------AFMFK-EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV 365
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
Y ++ +++G+ + E+ + G + TY L++ + K G+ D A ++E
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAI 466
M G + + C LC + + A+
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ Y+ ++ KA R +E + F+ M +V P+ Y+ + ++G L L + E
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 317 CMKQK---PKTFKFKYSKNWDPII------------------EPDIVIYNAVLNACVPSK 355
MK K P + + II EP++ Y A+++
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
Q V + +++ + PN TY + + + GN L ++R G VP+++TYK
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVI 443
+ + K+G V EA + E +I
Sbjct: 790 EFIYGYLKQGGVLEAFKGSDEENYAAII 817
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 7/167 (4%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+ PD+ ++ +NA + + +F +++++G+ PN T+ ++ G YD
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
++ G P +TY +LV+ + ++ +A ++EM K+G VY L
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEV---TFTGMIKSSMDGGHIDD 500
G AI +I+ L ++ L + T+ +IK G D+
Sbjct: 376 IEAGSLNKAI----EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 2/204 (0%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D V YN +++ C K+ ++ K GLKP+ TY + + + + +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
+R+G +P+ TY V++ K + +E E EM + V VY L C
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGT 518
GR A+ E ++ P T+T +IK +++ +FE M+ + PN+
Sbjct: 659 GRLSMALELREDMKH-KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 519 INTMLKVYGQNDKFSKAKFLFEEV 542
++ YG+ + K + L E+
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREM 741
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+++T + K + +EA+++F+ M V P++ ++++ LG G E
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDE------ 313
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
F FK K + +EP ++ Y+ ++ +K+ +V K++ K G PN
Sbjct: 314 -------AFMFK-EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV 365
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
Y ++ +++G+ + E+ + G + TY L++ + K G+ D A ++E
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAI 466
M G + + C LC + + A+
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ Y+ ++ KA R +E + F+ M +V P+ Y+ + ++G L L + E
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 317 CMKQK---PKTFKFKYSKNWDPII------------------EPDIVIYNAVLNACVPSK 355
MK K P + + II EP++ Y A+++
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
Q V + +++ + PN TY + + + GN L ++R G VP+++TYK
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVI 443
+ + K+G V EA + E +I
Sbjct: 790 EFIYGYLKQGGVLEAFKGSDEENYAAII 817
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 7/167 (4%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+ PD+ ++ +NA + + +F +++++G+ PN T+ ++ G YD
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
++ G P +TY +LV+ + ++ +A ++EM K+G VY L
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEV---TFTGMIKSSMDGGHIDD 500
G AI +I+ L ++ L + T+ +IK G D+
Sbjct: 376 IEAGSLNKAI----EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 125/288 (43%), Gaps = 22/288 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+T + A+ K+A+ IF LM+ + + + +LG+A L KE + +
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 289
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+K++ P+++ Y +LN + + ++ + GLKP+
Sbjct: 290 LKER---------------FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIV 334
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
+ + +E ++S +LF ++ G P +Y +++R F K+ ++ A+E +M
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQ--DAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
G+ A+VY C + +G + D + E+ K + P T+ +IK +
Sbjct: 395 VDSGLQPDAAVY---TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Query: 496 GHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ I+ M ++ P+I T N ++K Y + + ++EE+
Sbjct: 452 KMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM 499
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT ++ K + A++ F+ M + + PD A Y + G L + +++ M
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
++K PD YNA++ K + + ++ ++ ++ ++P+ T
Sbjct: 430 QEKGHP--------------PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
+ + M+ + NY++ ++ ++ + G P+ +Y VL+R EGK EA + EM
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Query: 439 KRGV 442
+G+
Sbjct: 536 DKGM 539
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 14/190 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
V +++ + R+ + L I M+ + PD+ Y+S+ LG+AGL+ E+L ++
Sbjct: 178 IVMNRIIFAFAETRQIDKVLMILKEMK-EWECKPDVITYNSVLDILGRAGLVNEILGVLS 236
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
MK+ D + +I+ YN VLN + ++ ++ ++ + G++P+
Sbjct: 237 TMKE-------------DCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDL 283
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
+Y ++ +SGN LF ++++ P Y+ L+ K G A++ E
Sbjct: 284 LSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDE 343
Query: 437 MEKRGVIGTA 446
++ + A
Sbjct: 344 LKNTSSLDLA 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 327 FKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKK-SGLKPNGATYGLAMEV 385
K K W+ +PD++ YN+VL+ + + V +K+ + N TY +
Sbjct: 200 LKEMKEWE--CKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNG 257
Query: 386 TMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGT 445
++ +D+ ++ ++ + G P+ L+Y ++ + + G V E++ EM++R + +
Sbjct: 258 MRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPS 317
Query: 446 ASVYYELACCLCYYGRWQDAI---PEVEKIRRLPRARP 480
VY L CL G +Q A+ E++ L A P
Sbjct: 318 VYVYRALIDCLKKSGDFQSALQLSDELKNTSSLDLAGP 355
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 26/259 (10%)
Query: 256 RFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPD--MAAYHSIAVTL-GQAGLLKELL 312
R +++ + L R K + + L+ G I PD ++ A+ L G+A +L +
Sbjct: 75 RIIFSVAVVTLA---REKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSI 131
Query: 313 NIVECMKQK--PKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS 370
++Q P+T K NA+L AC+ +K +K + V+ ++ K
Sbjct: 132 QTFRNLEQYEIPRTVK----------------SLNALLFACLMAKDYKEANRVYLEMPKM 175
Query: 371 -GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDE 429
G++P+ TY + V +SG+ + + ++ R P A ++ +++ F+KE K DE
Sbjct: 176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDE 235
Query: 430 AVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMI 489
+ +R M++ GV + Y + CLC + +A ++ + R RP VT++ +I
Sbjct: 236 VRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSC-RMRPNSVTYSLLI 294
Query: 490 KSSMDGGHIDDCACIFECM 508
++D+ +FE M
Sbjct: 295 HGFCSEENLDEAMNLFEVM 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 17/252 (6%)
Query: 215 PFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKE 274
P +E +R + + G +++ + + Y+ R +S LL A+ KE
Sbjct: 108 PKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKS---LNALLFACLMAKDYKE 164
Query: 275 ALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWD 334
A +++ M + PD+ Y+ + L ++G +IV M++K W
Sbjct: 165 ANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERK-----------W- 212
Query: 335 PIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDL 394
I+P + +++ +++ V V + + + G+ ATY + ++ +
Sbjct: 213 --IKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAE 270
Query: 395 VHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELAC 454
L + P ++TY +L+ F E +DEA+ M G + Y+ L
Sbjct: 271 AKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIH 330
Query: 455 CLCYYGRWQDAI 466
CLC G ++ A+
Sbjct: 331 CLCKGGDFETAL 342
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 2/215 (0%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+ I IY+ +++ K VFK+LK+ G P TYG + + + G
Sbjct: 445 IDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
E+ ++ G TY +++ F K A +M K G+ +Y +
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPN 515
C G AI V+++++L R RP TF +I G + +F+ M+ C P
Sbjct: 565 CGMGNMDRAIQTVKEMQKL-RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 623
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEVKVATSDFN 550
+ T N ++ + + KA + +E+ +A N
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 23/277 (8%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECM---KQKPKTFKF-----KYSKNWD-----PI 336
PD+ Y++I G + + V+ M + +P T F Y+K+ D +
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 337 IE--------PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
+ P + +N ++N V +Q + + ++ +G+ N TY M+
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
G+ E F +++ G + TY+ L++ K G++ A+ +EM R + + V
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 449 YYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
Y L G +A ++++++ +P T+T I + G ++ E M
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKK-EGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 509 KD-HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
+ PNI T T++K + + KA +EE+K
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 827
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
++PD+++YN +++A K+++K +P T+ + +SG+
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
E+F +RR G VP T+ L+ ++ ++++AVE + EM GV Y ++ +
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI---M 666
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEV---TFTGMIKSSMDGGHIDDCACIFECMKDHCS 513
Y D E RL + L+V T+ ++K+ G + + + M
Sbjct: 667 QGYASVGDTGKAFEYFTRL-QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Query: 514 P-NIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
P N N ++ + + +A L +++K
Sbjct: 726 PRNSFVYNILIDGWARRGDVWEAADLIQQMK 756
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 275 ALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKN 332
A +F +M RG + PD+ AY ++ +AG+L M K +S+
Sbjct: 305 AFDLFKVMEQRG---IEPDLIAYSTLIDGYFKAGMLG--------MGHK------LFSQA 347
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
++ D+V++++ ++ V S S V+K++ G+ PN TY + ++ Q G
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
++GQI + G P +TY L+ F K G + +M K G +Y L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLE-VTFTGMIKSSMDGGHIDDCACIFECMKDH 511
L G A+ ++ L ++ L V F +I D+ +F M +
Sbjct: 468 VDGLSKQGLMLHAMR--FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 512 -CSPNIGTINTMLKVYGQNDKFSKAKFLF 539
P++ T T+++V + +A FLF
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ K +P LQ+F+LM+ N I+ + ++ LL +C
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRN-----------KISADIAVCNVVIHLL--FKCH 615
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+ + + KF ++ + +EPDIV YN ++ ++ +F+ LK + PN T
Sbjct: 616 RIEDAS-KF-FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
+ + V ++ + D +F + G P A+TY L+ F K ++ + + EM+
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDA 465
++G+ + Y + LC GR +A
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEA 760
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I ++V++N++++ ++ VF+ + G+KP+ AT+ M V++ G +
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
LF ++ + G P+AL Y L+ F K K ++ M++ + +V + L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPN 515
R +DA + + P VT+ MI +D+ IFE +K PN
Sbjct: 612 FKCHRIEDASKFFNNLIE-GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFE 540
T+ ++ V +N+ A +F
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFS 695
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 137/316 (43%), Gaps = 22/316 (6%)
Query: 230 LRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVY 289
R W+ AL +++W + K H+ S Y + +LGKA++ + MRG+ V
Sbjct: 97 FRDDWRSALGILKWAESCKGHK--HSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVT 154
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
+ A I AG +E + I + + +F KN + + N +L+
Sbjct: 155 LNTVA--KIMRRFAGAGEWEEAVGIFD------RLGEFGLEKNTESM--------NLLLD 198
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
K+ + V QL KS + PN T+ + + ++ + +++ G P
Sbjct: 199 TLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
++Y ++R + ++ + + E + EME G + Y + L +++A+
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF--ECMKDHCSPNIGTINTMLKVYG 527
+++R +P + + +I + G +++ +F E + S N T N+M+ +Y
Sbjct: 318 TRMKR-SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 376
Query: 528 QNDKFSKAKFLFEEVK 543
+D+ KA L +E++
Sbjct: 377 HHDEEDKAIELLKEME 392
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 139/329 (42%), Gaps = 22/329 (6%)
Query: 217 TEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEAL 276
T + +I+ G W++A+ + + + + +S + LL L K +R ++A
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNL---LLDTLCKEKRVEQAR 210
Query: 277 QIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPI 336
+ ++ +I P+ ++ +A ++E L + Q+ K F+
Sbjct: 211 VVLLQLKSHIT--PNAHTFNIFIHGWCKANRVEEALWTI----QEMKGHGFR-------- 256
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
P ++ Y ++ ++ V + +++ +G PN TY M ++
Sbjct: 257 --PCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR-EMEKRGVIGTASVYYELACC 455
+ +++RSG P++L Y L+ T + G+++EA R EM + GV S Y +
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 456 LCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM--KDHCS 513
C++ AI ++++ P T+ +++S G + + + + M K H S
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 514 PNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ T +++ + + A LFEE+
Sbjct: 435 LDESTYTFLIQRLCRANMCEWAYCLFEEM 463
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 137/316 (43%), Gaps = 22/316 (6%)
Query: 230 LRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVY 289
R W+ AL +++W + K H+ S Y + +LGKA++ + MRG+ V
Sbjct: 97 FRDDWRSALGILKWAESCKGHK--HSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVT 154
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
+ A I AG +E + I + + +F KN + + N +L+
Sbjct: 155 LNTVA--KIMRRFAGAGEWEEAVGIFD------RLGEFGLEKNTESM--------NLLLD 198
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
K+ + V QL KS + PN T+ + + ++ + +++ G P
Sbjct: 199 TLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
++Y ++R + ++ + + E + EME G + Y + L +++A+
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF--ECMKDHCSPNIGTINTMLKVYG 527
+++R +P + + +I + G +++ +F E + S N T N+M+ +Y
Sbjct: 318 TRMKR-SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 376
Query: 528 QNDKFSKAKFLFEEVK 543
+D+ KA L +E++
Sbjct: 377 HHDEEDKAIELLKEME 392
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 139/329 (42%), Gaps = 22/329 (6%)
Query: 217 TEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEAL 276
T + +I+ G W++A+ + + + + +S + LL L K +R ++A
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNL---LLDTLCKEKRVEQAR 210
Query: 277 QIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPI 336
+ ++ +I P+ ++ +A ++E L + Q+ K F+
Sbjct: 211 VVLLQLKSHIT--PNAHTFNIFIHGWCKANRVEEALWTI----QEMKGHGFR-------- 256
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
P ++ Y ++ ++ V + +++ +G PN TY M ++
Sbjct: 257 --PCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR-EMEKRGVIGTASVYYELACC 455
+ +++RSG P++L Y L+ T + G+++EA R EM + GV S Y +
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 456 LCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM--KDHCS 513
C++ AI ++++ P T+ +++S G + + + + M K H S
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 514 PNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ T +++ + + A LFEE+
Sbjct: 435 LDESTYTFLIQRLCRANMCEWAYCLFEEM 463
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 143/367 (38%), Gaps = 45/367 (12%)
Query: 192 RLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYN-YKDH 250
R+ DR IT + + MK LR+L + +GC ++ V Y+++
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 251 RKYQSRFVYTKLLA---------------VLGKARRPKEALQIFN--LMRGNIDVYPDMA 293
K + ++ K+LA VL K KE ++ + + RG V P++
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG---VLPNLF 252
Query: 294 AYHSIAVTLGQAGLLKELLNIVECM-KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACV 352
Y+ L Q G L + +V C+ +Q PK PD++ YN ++
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPK---------------PDVITYNNLIYGLC 297
Query: 353 PSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEAL 412
+ +++ ++ GL+P+ TY + + G L + G +G VP+
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 413 TYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIP---EV 469
TY+ L+ EG+ + A+ E +G+ +Y L L G +A E+
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQ 528
+ +P + + G+ K G + D + + M P+I T N ++ Y
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKM----GCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 529 NDKFSKA 535
K A
Sbjct: 474 QLKMENA 480
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
+Y L+ L EA Q+ N M +G I P++ ++ + L + G + + +V
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLI---PEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 316 ECMKQK---PKTFKFK-----YSKNW-------------DPIIEPDIVIYNAVLNACVPS 354
+ M K P F F YS D ++PD+ YN++LN +
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 355 KQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTY 414
+++ V +K + + G PN T+ + +E + D L +++ P+A+T+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 415 KVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
L+ F K G +D A R+ME+ + +++ Y +
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 130/300 (43%), Gaps = 28/300 (9%)
Query: 189 LVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRIL-EMLGLRGCWKQALSVVQWVYNY 247
L++ LS++ + + +L+ M GL E Q IL L GC A +V+ + +
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGL-IPEVQTFNILVNGLCKMGCVSDADGLVKVMIS- 454
Query: 248 KDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGL 307
+ F + L+ + + AL+I ++M N V PD+ Y+S+ L +
Sbjct: 455 --KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSK 511
Query: 308 LKELLNIVECMKQK---PKTFKF--------KYSKNWDPI----------IEPDIVIYNA 346
++++ + M +K P F F +Y K + + + PD V +
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 347 VLNACVPSKQWKGVSWVFKQLKKS-GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRS 405
+++ + G +F++++++ + + TY + + + N + +LF ++
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 406 GEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA 465
P+ TY+++V F K G V+ + + EM + G I + + + CLC R +A
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 124/300 (41%), Gaps = 32/300 (10%)
Query: 264 AVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAG---LLKELL-----NI- 314
AV+ + P +AL++FN MR + ++ Y S+ LG G ++E+L N+
Sbjct: 12 AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVG 71
Query: 315 --------VECMKQKPKTFKFKYSKN-------WDPIIEPDIVIYNAVLNACVPSKQWKG 359
V MK + K + + N +D EP + YNA+++ V S +
Sbjct: 72 NHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYD--CEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 360 VSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVR 419
V+ +++ G+ P+ ++ + M+ ++ L + G + Y +V
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 420 TFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR---LP 476
F++E E E +M GV S + +L LC G ++ ++K+ + LP
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 477 RARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAK 536
+ G+ + G + C+ E P++ T N ++ +N KF +A+
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIE---QGPKPDVITYNNLIYGLCKNSKFQEAE 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 122/308 (39%), Gaps = 24/308 (7%)
Query: 256 RFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
+F Y L+ L AL +FN G + P++ Y+++ L G++ E +
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGLSNQGMILEAAQLA 414
Query: 316 ECMKQKP-----KTF--------KFKYSKNWDPIIE--------PDIVIYNAVLNACVPS 354
M +K +TF K + D +++ PDI +N +++
Sbjct: 415 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Query: 355 KQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTY 414
+ + + + +G+ P+ TY + ++ ++ V E + + G P T+
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Query: 415 KVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR 474
+L+ + + K+DEA+ + EM+ + V A + L C G A K+
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Query: 475 LPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHC-SPNIGTINTMLKVYGQNDKFS 533
+ T+ +I + + ++ +F+ M D C P+ T M+ + + +
Sbjct: 595 AYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVN 654
Query: 534 KA-KFLFE 540
KFL E
Sbjct: 655 LGYKFLLE 662
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 124/297 (41%), Gaps = 30/297 (10%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ YT L+ L + KEALQ+ NLM D P+ Y+ I L + GL+ + + IVE
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEK-DEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 317 CMKQ---KPKTFKFKY-------SKNWD-------------PIIEPDIVIYNAVLNACVP 353
MK+ +P + + D +PD++ YNA+++
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 354 SKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALT 413
+ ++ L + + T + + T+++G+ + EL+ QI S V + T
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496
Query: 414 YKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR 473
Y ++ F K G ++ A + +M + + Y L LC G A E+++
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 474 RLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGT----INTMLKV 525
R P V+F MI S+ G I + M + SP++ T IN LK+
Sbjct: 557 R-DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 20/282 (7%)
Query: 262 LLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK 321
LL L + +A+ + MR N + PD+ +Y+++ + L++ L + MK
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRN-SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 322 PKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGL 381
+ W +V + +++A + + K++K GL+ + Y
Sbjct: 207 GCS--------WS------LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 382 AMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
+ G D LF ++ G+ P A+TY L+R F K G++ EA E M +RG
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 442 VIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDC 501
V Y L LC G+ ++A+ ++ + P VT+ +I G + D
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEAL-QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 502 ACIFECMKD-HCSPNIGTINTMLK---VYGQNDKFSKAKFLF 539
I E MK P+ T N +L G D+ SK +L
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 150/363 (41%), Gaps = 32/363 (8%)
Query: 204 KLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLL 263
K+ R++ G+ TE +L ++ R WK A + Q V H S +Y ++L
Sbjct: 95 KIKRILDKCGIDLTEELVLEVVNRN--RSDWKPAYILSQLVVKQSVH--LSSSMLYNEIL 150
Query: 264 AVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ--- 320
VLGK RR +E Q+F+ M D + + Y + A + E + + E K+
Sbjct: 151 DVLGKMRRFEEFHQVFDEMSKR-DGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGI 209
Query: 321 --KPKTF--------KFKYSKNWDPIIEP-------DIVIYNAVLNA-CVPSKQWKGVSW 362
F ++K+ + + + DI N +LN CV + +
Sbjct: 210 DDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRF 269
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
+K + S +P+ +YG + + G EL+ + + P+ ++
Sbjct: 270 -WKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALC 328
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR-RLPRARPL 481
+ ++ EA+E RE+ ++G Y L LC R + VE++ + P
Sbjct: 329 FKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPN 388
Query: 482 EVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
+VTF+ ++K S +D + E M K+ C N M ++Y Q DK K + ++
Sbjct: 389 DVTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWS 445
Query: 541 EVK 543
E++
Sbjct: 446 EME 448
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 251 RKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKE 310
R +SR TKL+ VL + RP EA +F + P + +Y ++ +
Sbjct: 43 RTVRSR---TKLMNVLIERGRPHEAQTVFKTL-AETGHRPSLISYTTLLAAMTVQKQYGS 98
Query: 311 LLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS 370
+ +IV ++Q D + +NAV+NA S + ++K+
Sbjct: 99 ISSIVSEVEQSGTKL--------------DSIFFNAVINAFSESGNMEDAVQALLKMKEL 144
Query: 371 GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEV---PEALTYKVLVRTFWKEGKV 427
GL P +TY ++ +G + EL + G V P T+ VLV+ + K+ KV
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKV 204
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPE-VEKIRRLPRARP 480
+EA E +++ME+ GV Y +A C G A E VEK+ +A+P
Sbjct: 205 EEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 258
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 149/364 (40%), Gaps = 52/364 (14%)
Query: 231 RGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYP 290
+G A+ V++ + N + + + FV + +++ K +P+ AL F + + P
Sbjct: 147 KGEMDNAIEVLEMMTNKNVNYPFDN-FVCSAVISGFCKIGKPELALGFFESAVDSGVLVP 205
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNW-----------DPIIEP 339
++ Y ++ L Q G + E+ ++V ++ + F + NW D +++
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 340 ----------DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQS 389
D+V Y+ +++ + + ++ K G++PN TY + +
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 390 GNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVY 449
G + LF +I G + Y L+ ++G ++ A + +ME+RG+ + Y
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 450 YELACCLCYYGRWQDA--------------------------IPEVEKIRR--LPRARPL 481
+ LC GR +A I V +IRR L P+
Sbjct: 386 NTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPM 445
Query: 482 EVTFTG-MIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSKAKFLF 539
++ ++K+ + G + ++ M + +P+ T TM+K Y + + +A +F
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 540 EEVK 543
E++
Sbjct: 506 NELR 509
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 87/209 (41%), Gaps = 2/209 (0%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D++ Y ++N + K G+ N TY + Q G LF
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
+ G VP +TY +L+ KEG +A + + M +G++ +Y + C
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGT 518
G+ +DA+ V + + + R P T + MIK G +++ +F KD + S +
Sbjct: 774 GQTEDAMRVVSR-KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 519 INTMLKVYGQNDKFSKAKFLFEEVKVATS 547
++K + + +A+ L E+ V+ S
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLVSES 861
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 25/247 (10%)
Query: 224 ILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMR 283
I+ L RG K+AL V+ +++KD VY LL R KEA ++ M+
Sbjct: 179 IISALCSRGHVKRALGVM---HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMK 235
Query: 284 GNIDVYPDMAAYHSIAVTLGQ-------AGLLKELLNIVECMKQKPKTFKFKYSKNWDPI 336
+ + PD+ ++S+ L + +GL+ E LNI+ M+ ++K
Sbjct: 236 -SAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMR----SYK---------- 280
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+P + YN +L+ +++ + + +Q+K+SG P+ +Y + V +G + +
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
++ ++ G PE Y L+ +V+ A++ +M++ V G VY L L
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
Query: 457 CYYGRWQ 463
C G ++
Sbjct: 401 CKGGNFE 407
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 30/232 (12%)
Query: 254 QSRFVYTKLLAVLGKARRPKEALQIF----NLMRGNIDVYPDMAAYHSIAVTLGQAGLLK 309
Q F T +++ L K AL + +++ GN +++ Y S+ +K
Sbjct: 171 QDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGN-----ELSVYRSLLFGWSVQRNVK 225
Query: 310 ELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACV-------PSKQWKGVSW 362
E +++ MK I PD+ +N++L PS
Sbjct: 226 EARRVIQDMKSAG--------------ITPDLFCFNSLLTCLCERNVNRNPSGLVPEALN 271
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
+ +++ ++P +Y + + ++ ++ Q++RSG P+ +Y +VR +
Sbjct: 272 IMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLY 331
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR 474
G+ + + + EM +RG YY+L LC R A+ EK++R
Sbjct: 332 LTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D++ YNA+L+A S G +F+++ GLKP+ ++ + + +G+ +++
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELA---CCL 456
+++R VP T+ +++T K KVD+A + EM ++G Y + C
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPN 515
C R + +++ + LP T+ ++K + G D I+E M + P
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRH----TYNMVLKLLIRIGRFDRATEIWEGMSERKFYPT 417
Query: 516 IGTINTML 523
+ T M+
Sbjct: 418 VATYTVMI 425
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 6/202 (2%)
Query: 342 VIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQ 401
+++ A A +PS+ + F ++ + G+KP + + + E FG+
Sbjct: 143 IVFRAYSRANLPSEACRA----FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 402 IRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGR 461
+ G VP A TY +LVR + + A + EM +R + Y L LC G
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 462 WQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTIN 520
+++ L +P +F I + D G + + + MK + PN+ T N
Sbjct: 259 VDGGYKMFQEMGNLG-LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFN 317
Query: 521 TMLKVYGQNDKFSKAKFLFEEV 542
++K +N+K A L +E+
Sbjct: 318 HIIKTLCKNEKVDDAYLLLDEM 339
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 23/264 (8%)
Query: 275 ALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKN 332
A +F +M RG + PD+ AY ++ +AG+L M K +S+
Sbjct: 305 AFDLFKVMEQRG---IEPDLIAYSTLIDGYFKAGMLG--------MGHK------LFSQA 347
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
++ D+V++++ ++ V S S V+K++ G+ PN TY + ++ Q G
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
++GQI + G P +TY L+ F K G + +M K G +Y L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLE-VTFTGMIKSSMDGGHIDDCACIFECMKDH 511
L G A+ ++ L ++ L V F +I D+ +F M +
Sbjct: 468 VDGLSKQGLMLHAMR--FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 512 -CSPNIGTINTMLKVYGQNDKFSK 534
P++ T T+++V D F K
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCK 549
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIA-VTLGQAGLLKEL----- 311
V+ L+ + R EAL++F LM G + PD+A + ++ V++ + K +
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIG 556
Query: 312 LNIVECMKQKPKT-----------FKFK------YSKNWDPIIE----PDIVIYNAVLNA 350
L + + M++ + FK SK ++ +IE PDIV YN ++
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
++ +F+ LK + PN T + + V ++ + D +F + G P
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA 465
A+TY L+ F K ++ + + EM+++G+ + Y + LC GR +A
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 251 RKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKE 310
R +SR TKL+ VL + RP EA +F + P + +Y ++ +
Sbjct: 43 RTVRSR---TKLMNVLIERGRPHEAQTVFKTL-AETGHRPSLISYTTLLAAMTVQKQYGS 98
Query: 311 LLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS 370
+ +IV ++Q D + +NAV+NA S + ++K+
Sbjct: 99 ISSIVSEVEQSGTKL--------------DSIFFNAVINAFSESGNMEDAVQALLKMKEL 144
Query: 371 GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEV---PEALTYKVLVRTFWKEGKV 427
GL P +TY ++ +G + EL + G V P T+ VLV+ + K+ KV
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKV 204
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPE-VEKIRRLPRARP 480
+EA E +++ME+ GV Y +A C G A E VEK+ +A+P
Sbjct: 205 EEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 258
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 127/324 (39%), Gaps = 58/324 (17%)
Query: 241 VQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSI 298
VQ + K+ + Y L+ G A +P+ + ++ +LM GN+DV P++ ++ +
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 299 AVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACV-PSKQW 357
+ ++E +V+ M++ + PD V YN + V +
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECG--------------VRPDTVTYNTIATCYVQKGETV 240
Query: 358 KGVSWVF-KQLKKSGLKPNGATYGLAMEVTMQSG-------------------------- 390
+ S V K + K KPNG T G+ + + G
Sbjct: 241 RAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNS 300
Query: 391 ---------NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
+ D + E+ ++ + +TY ++ + G +++A + +EM K G
Sbjct: 301 LINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 360
Query: 442 VIGTASVYYELACCLCYYGRWQDAIPEVEKIRRL-PRARPLEVTFTGMIKSSMDGGHIDD 500
V A Y LA Y R ++ E + L +RP V FT +I G +DD
Sbjct: 361 VKPDAHAYSILA---KGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDD 417
Query: 501 CACIFECM-KDHCSPNIGTINTML 523
+F M K SPNI T T++
Sbjct: 418 AMRVFNKMCKFGVSPNIKTFETLM 441
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 132/301 (43%), Gaps = 35/301 (11%)
Query: 273 KEALQIFNLMRGNI----DVYPDMAAYHSIA---VTLGQA--GLLKELLNIVECMKQKPK 323
K AL +F+ G++ +++ D A H +A +T G A G + E + + + M K +
Sbjct: 150 KNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQ 209
Query: 324 T---------FKFKYSKN----WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS 370
K K + +D E D+V +NA+++ V K +FK+++ +
Sbjct: 210 VAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDA 269
Query: 371 GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEAL-----TYKVLVRTFWKEG 425
G P+ T + G+ + L I + V ++ + L+ + K G
Sbjct: 270 GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 329
Query: 426 KVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTF 485
+D A+E R ++ R + S + L L + + +I E+++RL + P EVTF
Sbjct: 330 SIDRAIEVFRGVKDRDL----STWNTLIVGLALH-HAEGSIEMFEEMQRL-KVWPNEVTF 383
Query: 486 TGMIKSSMDGGHIDDCACIFECMKD--HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
G+I + G +D+ F M+D + PNI M+ + G+ + +A E +K
Sbjct: 384 IGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Query: 544 V 544
+
Sbjct: 444 I 444
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 260 TKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
TKL+ L + RP+EA IFN + G+ P + Y ++ L + LL+++
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGH---KPSLITYTTLVTALTRQKHFHSLLSLIS- 378
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
K KN ++PD +++NA++NA S +F+++K+SG KP +
Sbjct: 379 ----------KVEKNG---LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTAS 425
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEV-PEALTYKVLVRTFWKEGKVDEAVEAIRE 436
T+ ++ + G + L + R + P T +LV+ + + K++EA + +
Sbjct: 426 TFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYK 485
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDA----IPEVEKIRRLPRARPLEVTFTGMIKSS 492
M+ GV + LA G A IP + + P R T ++
Sbjct: 486 MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR----TCGTIVNGY 541
Query: 493 MDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVY 526
+ G +++ F MK+ PN+ N+++K +
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF 576
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 338 EPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHE 397
+P ++ Y ++ A K + + + +++K+GLKP+ + + + +SGN D +
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 398 LFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIG----TASVYYELA 453
+F +++ SG P A T+ L++ + K GK++E+ + M + ++ T ++ L
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI---LV 467
Query: 454 CCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM----- 508
C + ++A V K++ +P VTF + K+ G C E M
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSY-GVKPDVVTFNTLAKAYARIGS----TCTAEDMIIPRM 522
Query: 509 -KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ PN+ T T++ Y + K +A F +K
Sbjct: 523 LHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 70/153 (45%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+ P++ ++N+++ + GV V +++ G+KP+ T+ M G+
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
E++ + G P+ + +L + + + G+ ++A + + +M K GV +Y ++
Sbjct: 622 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMI 489
C G + A+ +K+ + P T+ +I
Sbjct: 682 CSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 133/315 (42%), Gaps = 57/315 (18%)
Query: 231 RGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYP 290
+G ++A+ V Q + K R + Y ++ + GKA + + +++ MR + P
Sbjct: 242 KGNTEEAIDVFQRM---KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH-QCKP 297
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
++ Y ++ + GL ++ I E +++ +EPD+ +YNA++ +
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDG--------------LEPDVYVYNALMES 343
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+ G + +F ++ G +P+ A+Y + ++ ++G + +F +++R G P
Sbjct: 344 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE 470
++ +L+ + K V + ++EM + GV V L L YGR
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV---LNSMLNLYGRLGQ------ 454
Query: 471 KIRRLPRARPLEVTFTGM--IKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQ 528
FT M I + M+ G C+ +I T N ++ +YG+
Sbjct: 455 --------------FTKMEKILAEMENG--------------PCTADISTYNILINIYGK 486
Query: 529 NDKFSKAKFLFEEVK 543
+ + LF E+K
Sbjct: 487 AGFLERIEELFVELK 501
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+VY L+ +A P A +IF+LM+ ++ PD A+Y+ + G+AGL + + E
Sbjct: 335 YVYNALMESYSRAGYPYGAAEIFSLMQ-HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 317 CMKQKPKTFKFK--------YSKNWDPI-------------IEPDIVIYNAVLNACVPSK 355
MK+ K YSK D +EPD + N++LN
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 453
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
Q+ + + +++ + +TY + + + ++G + + ELF +++ P+ +T+
Sbjct: 454 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVI---GTASVYYELACCLCYYGRWQDAIPEVEKI 472
+ + ++ + +E EM G GTA V L+ C + +VE++
Sbjct: 514 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL--LSAC--------SSEEQVEQV 563
Query: 473 RRLPRARPLEVTFTGMIKSSM 493
+ R VT + ++ M
Sbjct: 564 TSVLRTMHKGVTVSSLVPKLM 584
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 15/218 (6%)
Query: 332 NWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFK-QLKKSGLKPNGATYGLAMEVTMQSG 390
+WD +I + + LN K+W + V + L+KS +P+ + L ++ Q
Sbjct: 118 SWDDLINVSVQLR---LN-----KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKF 169
Query: 391 NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV----IGTA 446
Y L+ Q+ S VP TY +L++ + G ++ A + EM+ V IG
Sbjct: 170 QYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVT 229
Query: 447 SVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFE 506
+ + G ++AI ++++R R +P T+ MI ++
Sbjct: 230 VYNAYIEGLMKRKGNTEEAIDVFQRMKR-DRCKPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 507 CMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
M+ H C PNI T ++ + + KA+ +FE+++
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 326
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 133/315 (42%), Gaps = 57/315 (18%)
Query: 231 RGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYP 290
+G ++A+ V Q + K R + Y ++ + GKA + + +++ MR + P
Sbjct: 264 KGNTEEAIDVFQRM---KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH-QCKP 319
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
++ Y ++ + GL ++ I E +++ +EPD+ +YNA++ +
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDG--------------LEPDVYVYNALMES 365
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+ G + +F ++ G +P+ A+Y + ++ ++G + +F +++R G P
Sbjct: 366 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE 470
++ +L+ + K V + ++EM + GV V L L YGR
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV---LNSMLNLYGRLGQ------ 476
Query: 471 KIRRLPRARPLEVTFTGM--IKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQ 528
FT M I + M+ G C+ +I T N ++ +YG+
Sbjct: 477 --------------FTKMEKILAEMENG--------------PCTADISTYNILINIYGK 508
Query: 529 NDKFSKAKFLFEEVK 543
+ + LF E+K
Sbjct: 509 AGFLERIEELFVELK 523
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+VY L+ +A P A +IF+LM+ ++ PD A+Y+ + G+AGL + + E
Sbjct: 357 YVYNALMESYSRAGYPYGAAEIFSLMQ-HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 415
Query: 317 CMKQKPKTFKFK--------YSKNWDPI-------------IEPDIVIYNAVLNACVPSK 355
MK+ K YSK D +EPD + N++LN
Sbjct: 416 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 475
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
Q+ + + +++ + +TY + + + ++G + + ELF +++ P+ +T+
Sbjct: 476 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVI---GTASVYYELACCLCYYGRWQDAIPEVEKI 472
+ + ++ + +E EM G GTA V L+ C + +VE++
Sbjct: 536 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL--LSAC--------SSEEQVEQV 585
Query: 473 RRLPRARPLEVTFTGMIKSSM 493
+ R VT + ++ M
Sbjct: 586 TSVLRTMHKGVTVSSLVPKLM 606
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 15/218 (6%)
Query: 332 NWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFK-QLKKSGLKPNGATYGLAMEVTMQSG 390
+WD +I + + LN K+W + V + L+KS +P+ + L ++ Q
Sbjct: 140 SWDDLINVSVQLR---LN-----KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKF 191
Query: 391 NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV----IGTA 446
Y L+ Q+ S VP TY +L++ + G ++ A + EM+ V IG
Sbjct: 192 QYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVT 251
Query: 447 SVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFE 506
+ + G ++AI ++++R R +P T+ MI ++
Sbjct: 252 VYNAYIEGLMKRKGNTEEAIDVFQRMKR-DRCKPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 507 CMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
M+ H C PNI T ++ + + KA+ +FE+++
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 348
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 23/293 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ + L+ L K R +A ++F+ M G + P+ Y + L Q G +
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGR-GISPNRVTYTILISGLCQRGSADD------ 251
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
+ ++ + S N+ PD V +NA+L+ + + + +K G
Sbjct: 252 ---ARKLFYEMQTSGNY-----PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGL 303
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
Y ++ ++ Y EL+ + + P+ + Y +L++ K GK+++A++ +
Sbjct: 304 RGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSS 363
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIP---EVEKIRRLPRARPLEVTFTGMIKSSM 493
M +G+ Y + LC G ++ E+ + P A T T +I S
Sbjct: 364 MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA----CTHTILICSMC 419
Query: 494 DGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
G + + IF E K CSP++ T N ++ ++ + +A+ L +++V
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 16/269 (5%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ + L++ K ++A++ F M+ D PD+ Y+ I + + + L V
Sbjct: 128 YCFCVLISAYAKMGMAEKAVESFGRMK-EFDCRPDVFTYNVILRVMMREEVFFMLAFAV- 185
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
Y++ P++ + +++ + +F + G+ PN
Sbjct: 186 ------------YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + + Q G+ D +LF +++ SG P+++ + L+ F K G++ EA E +R
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
EK G + Y L L R+ A + + +P + +T +I+ G
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK-KNIKPDIILYTILIQGLSKAG 352
Query: 497 HIDDCACIFECMKDH-CSPNIGTINTMLK 524
I+D + M SP+ N ++K
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 97/234 (41%), Gaps = 26/234 (11%)
Query: 255 SRFVYTKLLAVLGKARRPKEALQIFNLMR--GNIDVYPDMAAYHSIAVTLGQAGLLKELL 312
+R YT L++ L + +A ++F M+ GN YPD A++++ + G + E
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGN---YPDSVAHNALLDGFCKLGRMVEAF 288
Query: 313 NIVECMKQKPKTFKFK-YSKNWDPI--------------------IEPDIVIYNAVLNAC 351
++ ++ + YS D + I+PDI++Y ++
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL 348
Query: 352 VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEA 411
+ + + + + G+ P+ Y ++ G + L ++ + P+A
Sbjct: 349 SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408
Query: 412 LTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA 465
T+ +L+ + + G V EA E E+EK G + + + L LC G ++A
Sbjct: 409 CTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y+ +++ K + L++F+ M+ + PD Y+++ L +A + E N+++ M
Sbjct: 305 YSSMISCYSKGGSLNKVLKLFDRMKKEC-IEPDRKVYNAVVHALAKASFVSEARNLMKTM 363
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+++ IEP++V YN+++ +++ + VF ++ + GL P T
Sbjct: 364 EEEKG-------------IEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 410
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y M + +++G + V EL ++R+ G P TY +L+R + D + EM+
Sbjct: 411 YHAFMRI-LRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK 467
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDA 465
++ V S Y + L G+ ++A
Sbjct: 468 EKTVGPDLSSYIVMIHGLFLNGKIEEA 494
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 22/194 (11%)
Query: 272 PKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSK 331
P+EA +++ M GN+ V D+ +Y S+ + G L ++L + + MK++
Sbjct: 283 PREAERVWMEM-GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKE---------- 331
Query: 332 NWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS-GLKPNGATYGLAMEVTMQSG 390
IEPD +YNAV++A + + K +++ G++PN TY ++ ++
Sbjct: 332 ----CIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 391 NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYY 450
+ ++F ++ G P TY +R + G +E E + +M K G T Y
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYI 444
Query: 451 ELACCLCYYGRWQD 464
L LC RW+D
Sbjct: 445 MLIRKLC---RWRD 455
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 2/211 (0%)
Query: 330 SKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQS 389
SK + I+ +VIYNA+++ +F ++ G+ P+ TY ++ +S
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 390 GNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVY 449
G + +L + P+ +T+ L+ KEGKV EA E +M +RG+ T Y
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 450 YELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECM 508
+ C R DA ++ + P VTF+ +I +D+ IF E
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMAS-KSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 509 KDHCSPNIGTINTMLKVYGQNDKFSKAKFLF 539
+ N T T++ + Q A+ L
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 91/217 (41%), Gaps = 4/217 (1%)
Query: 329 YSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQ 388
+++ D I PD++ Y+ ++++ S +W + + + + + P+ T+ + ++
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 389 SGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
G E++G + R G P +TY ++ F K+ ++++A + M +
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 449 YYELACCLCYYGRWQDAIPE-VEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFEC 507
+ L C R + + E RR A VT+T +I G +D +
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT--VTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 508 M-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
M +PN T +ML + KA + E+++
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 344 YNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
Y ++N + + +++++ +K + Y ++ + G++ LF ++
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQ 463
G P+ +TY ++ +F + G+ +A + +R+M +R + + L L G+
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 464 DAIPEV--EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTIN 520
+A E+ + +RR P +T+ MI ++D + + M CSP++ T +
Sbjct: 164 EA-EEIYGDMLRR--GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS 220
Query: 521 TMLKVYGQNDKFSKAKFLFEEV 542
T++ Y + + +F E+
Sbjct: 221 TLINGYCKAKRVDNGMEIFCEM 242
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 147/370 (39%), Gaps = 44/370 (11%)
Query: 202 DWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTK 261
D K+ L+ + + + + +L+ L G ALSV +W N K + S Y
Sbjct: 78 DSKVETLLNEASVKLSPALIEEVLKKLSNAGVL--ALSVFKWAENQKGFKHTTSN--YNA 133
Query: 262 LLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK 321
L+ LGK ++ K + + M+ + + A I+ +A +KE + M++
Sbjct: 134 LIESLGKIKQFKLIWSLVDDMKAKKLLSKETFAL--ISRRYARARKVKEAIGAFHKMEE- 190
Query: 322 PKTFKFK-----YSKNWDPI--------------------IEPDIVIYNAVLNACVPSKQ 356
F FK +++ D + EPDI Y +L
Sbjct: 191 ---FGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
V V +++K G +P+ YG+ + ++ Y+ F ++ + P +
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRL- 475
L+ E K+++A+E + G A Y L C+ R +DA V+++R
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 476 --PRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFS 533
P AR ++ +I+ + +++ M C P + T M++++ ++
Sbjct: 368 VGPNARTYDIILHHLIRMQRSKEAYE----VYQTMS--CEPTVSTYEIMVRMFCNKERLD 421
Query: 534 KAKFLFEEVK 543
A +++E+K
Sbjct: 422 MAIKIWDEMK 431
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 19/242 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y ++ KA++ +EA++ FN M + P + S+ LG L + L E
Sbjct: 269 AYGIIINAHCKAKKYEEAIRFFNEMEQR-NCKPSPHIFCSLINGLGSEKKLNDALEFFE- 326
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+ K F P+ P YNA++ A S++ + +++ G+ PN
Sbjct: 327 -RSKSSGF---------PLEAP---TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR 373
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + + ++ +E++ + S E P TY+++VR F + ++D A++ EM
Sbjct: 374 TYDIILHHLIRMQRSKEAYEVYQTM--SCE-PTVSTYEIMVRMFCNKERLDMAIKIWDEM 430
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+ +GV+ ++ L LC+ + +A ++ + RP F+ + ++ +D G
Sbjct: 431 KGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG-IRPPGHMFSRLKQTLLDEGR 489
Query: 498 ID 499
D
Sbjct: 490 KD 491
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I PDIV ++A++NA V ++ ++K++ + + P TY ++ + D
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ + G P+ +T+ L+ + K +VD +E EM +RG++ Y L
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMI 489
C G A + ++ A P +TF M+
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVA-PDYITFHCML 227
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 2/207 (0%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+ D+VI A+++ +F ++ + G+ PN TY ++ SG +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+L + P+ +T+ L+ F KE KV EA E +EM + + T Y +
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPN 515
C R DA ++ + P VTF+ +I +D+ IF E + N
Sbjct: 126 CKQDRVDDAKRMLDSMAS-KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
T T++ + Q A+ L E+
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEM 211
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 260 TKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMK 319
+LL L +A E ++F ++G D +Y+ G G L L++ + MK
Sbjct: 216 NELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMK 275
Query: 320 QKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATY 379
++ + + PDI YN++++ + K V+ +LK SG +P+ +TY
Sbjct: 276 ERSSVYGSSFG--------PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTY 327
Query: 380 GLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEK 439
+ ++ +S D ++G+++ +G VP+ + Y L+ K KV EA + +M +
Sbjct: 328 RILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQ 387
Query: 440 RGV----------------IGTASVYYELACCLCYYGRWQDAI 466
GV G A + L C L G++ DAI
Sbjct: 388 EGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAI 430
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 26/215 (12%)
Query: 275 ALQIFNLMRGNIDVY-----PDMAAYHSIAVTLGQAGLLKELLNIVECMK---QKPKTFK 326
AL +F M+ VY PD+ Y+S+ L G K+ L + + +K +P
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 327 FKY-------SKNWDPIIE-----------PDIVIYNAVLNACVPSKQWKGVSWVFKQLK 368
++ S D + PD ++YN +L+ + +++ +F+++
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 369 KSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVD 428
+ G++ + TY + ++ ++G + LF +++ G+ +A+T+ ++ +EGK++
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 429 EAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQ 463
AV+ + EME RG L GRW
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 164/414 (39%), Gaps = 46/414 (11%)
Query: 156 FDDDIEINEHWYNESYGLLKRTQKRSEVEVIRFLVERLSDREITTKDWKLSRLMKL--SG 213
DDD N+ + +LK + E E RF VE R ++ + RL+ L S
Sbjct: 109 LDDD--------NDGFAVLKSIPQSRE-EAGRFDVEEDESRHPLVRE--VGRLIGLRSSW 157
Query: 214 LPFTEGQLLRILEMLG-------LRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVL 266
P EGQ+ +L L LR + +++ + + + R VY +L VL
Sbjct: 158 NPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVL 217
Query: 267 GKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK----- 321
K + + + ++ LM+ +Y A+ + V+ +AG L++ L ++ M++
Sbjct: 218 SKTKLCQGSRRVLVLMKRR-GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPN 276
Query: 322 -----------------PKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVF 364
K +F I+ P++V YN ++ + + +
Sbjct: 277 LLICNTTIDVFVRANRLEKALRFLERMQVVGIV-PNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 365 KQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI-RRSGEVPEALTYKVLVRTFWK 423
+ + G P+ +Y M + V +L ++ + G VP+ +TY L+ K
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEV 483
DEA+ +++ +++G Y + LC GR +A + ++ P V
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 484 TFTGMIKSSMDGGHIDDCACIFECMKDHC-SPNIGTINTMLKVYGQNDKFSKAK 536
T+T ++ G +D + + M H PN + +L + K +A+
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAR 509
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 106/295 (35%), Gaps = 49/295 (16%)
Query: 248 KDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGL 307
K+H + Y L+ +L K EAL + D Y +I L + G
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK-GFRIDKLGYSAIVHALCKEGR 433
Query: 308 LKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQL 367
+ E +++ M SK P PD+V Y AV+N + + + +
Sbjct: 434 MSEAKDLINEM----------LSKGHCP---PDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
G KPN +Y + ++G E+ P ++TY V++ +EGK+
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 428 DEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTG 487
EA + +REM +G L LC GR +A +E
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFME----------------- 583
Query: 488 MIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
EC+ C+ N+ T++ + QND+ A + +++
Sbjct: 584 ------------------ECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
PD V Y+A+L+ S + + V ++++ +G KP+ + + ++ ++G+YD + +
Sbjct: 254 PDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYV 313
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
+++ P + Y L+ + GK A EM + G+ L +
Sbjct: 314 LQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKT---LTALVKI 370
Query: 459 YG--RW-QDAIPEVEKIRRLPRARPLE-VTFTGMIKSSMDGGHIDDCACIFECMKD--HC 512
YG RW +DA+ E+++ + P++ + + ++ D G ++ +F MK+ C
Sbjct: 371 YGKARWARDALQLWEEMK--AKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQC 428
Query: 513 SPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVATSDFN 550
P+ + ML +YG K KA LFEE+ A N
Sbjct: 429 RPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 21/234 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
VY LL +G+A +P A +FN M + P+ ++ G+A ++ L + E
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEML-EAGLTPNEKTLTALVKIYGKARWARDALQLWEE 386
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS-GLKPNG 376
MK +K W P+ D ++YN +LN C + +F +K+S +P+
Sbjct: 387 MK----------AKKW-PM---DFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDN 432
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
+Y + + G + ELF ++ ++G + LV+ K ++D+ V
Sbjct: 433 FSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDL 492
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR-LPRARPLEVTFTGMI 489
KRGV L CL ++ + EK+ L RA VTF +I
Sbjct: 493 SIKRGVKPDD----RLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLI 542
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 320 QKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATY 379
QK TF F + K+ + + + YN + + +Q++ + + ++ K G++ + TY
Sbjct: 167 QKTHTF-FNWVKS-KSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITY 224
Query: 380 GLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEK 439
+ + Y+ E F ++ ++G +P+ +TY ++ + K GKV+E +
Sbjct: 225 STIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVA 284
Query: 440 RGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHID 499
G A + L G + D I V + + +P V + ++++ G
Sbjct: 285 TGWKPDAIAFSVLGKMFGEAGDY-DGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPG 343
Query: 500 DCACIF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
+F E ++ +PN T+ ++K+YG+ A L+EE+K
Sbjct: 344 LARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 25/251 (9%)
Query: 243 WVYNYKDHRKYQSR---FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIA 299
WV+ Y D + + + + + ++ VL K + K+A +M + P + Y+++
Sbjct: 210 WVF-YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV-FGIKPTIVTYNTLV 267
Query: 300 VTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN-ACVPSKQWK 358
G ++ I+ MK K +PD+ YN +L+ C +
Sbjct: 268 QGFSLRGRIEGARLIISEMKSKG--------------FQPDMQTYNPILSWMCNEGR--- 310
Query: 359 GVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLV 418
S V +++K+ GL P+ +Y + + +G+ ++ ++ + G VP TY L+
Sbjct: 311 -ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Query: 419 RTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRA 478
+ E K++ A IRE+ ++G++ + Y L C +G + A +++
Sbjct: 370 HGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT-DGI 428
Query: 479 RPLEVTFTGMI 489
+P + T+T +I
Sbjct: 429 QPTQFTYTSLI 439
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 15/195 (7%)
Query: 255 SRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
++F YT L+ VL + + +EA ++F + G + PD+ +++ G + ++
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGK-GMKPDLVMMNTLMDGHCAIGNMDRAFSL 489
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
++ M I PD V YN ++ +++ + ++K+ G+KP
Sbjct: 490 LKEMDMMS--------------INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
+ +Y + + G+ + ++ G P LTY L++ K + + A E +
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
Query: 435 REMEKRGVIGTASVY 449
REM+ G++ S +
Sbjct: 596 REMKSEGIVPNDSSF 610
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 22/272 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+T + A+ K+A+ IF LM+ + + + +LG+A L KE + +
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 288
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+K++ P+++ Y +LN + + ++ + GLKP+
Sbjct: 289 LKER---------------FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 333
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
+ + +E ++S +LF ++ G P +Y +++R F K+ ++ A+E +M
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQ--DAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
G+ A+VY C + +G + D + E+ K + P T+ +IK +
Sbjct: 394 VDSGLQPDAAVY---TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 450
Query: 496 GHIDDCACIFECM-KDHCSPNIGTINTMLKVY 526
+ I+ M ++ P+I T N ++K Y
Sbjct: 451 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT ++ K + A++ F+ M + + PD A Y + G L + +++ M
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 428
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
++K PD YNA++ K + + ++ ++ ++ ++P+ T
Sbjct: 429 QEKGHP--------------PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 474
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
+ + M+ + NY++ ++ ++ + G P+ +Y VL+R EGK EA + EM
Sbjct: 475 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 534
Query: 439 KRGV 442
+G+
Sbjct: 535 DKGM 538
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 128/309 (41%), Gaps = 26/309 (8%)
Query: 241 VQWVYNYKDHRKYQSR-FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVY---PDMAAYH 296
V++VY RK Q F + ++ L K + +A + M+ VY P++ +Y+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK----VYGCSPNVVSYN 262
Query: 297 SIA---VTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVP 353
++ LG G + + +++ M + + P++ +N +++
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVEND--------------VSPNLTTFNILIDGFWK 308
Query: 354 SKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALT 413
G VFK++ +KPN +Y + G + ++ +G P +T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 414 YKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR 473
Y L+ F K + EA++ ++ +G + T +Y L C G+ D E++
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 474 RLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFS 533
R P T+ +I G+I+ +F+ + P++ T + +++ Y + +
Sbjct: 429 R-EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESR 487
Query: 534 KAKFLFEEV 542
KA L +E+
Sbjct: 488 KAAMLLKEM 496
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 360 VSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVR 419
V +V+K++ + ++PN T+ + + ++G + ++ ++ G P ++Y L+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 420 TFWK---EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD-AIPEVEKIRRL 475
+ K GK+ +A ++EM + V + + L G W+D +P K+ +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI-----DGFWKDDNLPGSMKVFKE 321
Query: 476 ---PRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDK 531
+P +++ +I +GG I + + + M PN+ T N ++ + +ND
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 532 FSKAKFLFEEVK 543
+A +F VK
Sbjct: 382 LKEALDMFGSVK 393
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Query: 343 IYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
IY+ +++ + + +++++ + G KPN Y + ++ + G + E+ ++
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 403 RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW 462
SG +P A TY L++ F+K G +EAV+ +EM+K G Y L LC GR
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 463 QDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFE---CMKDHCS-PNIGT 518
++A+ K+ + +P V ++ +IK G +D ++ C ++ S P++ T
Sbjct: 484 KEAMMVWSKMLTIG-IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 519 INTMLKVYGQNDKFSKA 535
N +L S+A
Sbjct: 543 YNILLDGLCMQKDISRA 559
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 152/366 (41%), Gaps = 26/366 (7%)
Query: 185 VIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWV 244
+ L++ L + T+ KL M L G E ++ L L+G +A+S+++ +
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 245 YNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTL 302
+ K + Y L+ L K RR +A+++ + M RG + + Y + L
Sbjct: 319 VSSK---CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG---YHLNQHIYSVLISGL 372
Query: 303 GQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSW 362
+ G +E +++ M +K +P+IV+Y+ +++ +
Sbjct: 373 FKEGKAEEAMSLWRKMAEKG--------------CKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
+ ++ SG PN TY M+ ++G + +++ ++ ++G Y VL+
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKI--RRLPRARP 480
G+V EA+ +M G+ Y + LC G A+ ++ + P+++P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 481 LEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQ-NDKFSKAKFL 538
VT+ ++ I + M D C P++ T NT L + ++ K +
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 539 FEEVKV 544
EE+ V
Sbjct: 599 LEELVV 604
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 344 YNAVLNACVPSKQW-KGV---SWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
+N+VLN + + +G+ +V + PNG ++ L ++ + D E+F
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF 210
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
+ +P+ TY L+ KE ++DEAV + EM+ G + +Y L LC
Sbjct: 211 RGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGT 518
G V+ + L P EVT+ +I G +D + E M C PN T
Sbjct: 271 GDLTRVTKLVDNM-FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 519 INTML 523
T++
Sbjct: 330 YGTLI 334
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 129/318 (40%), Gaps = 54/318 (16%)
Query: 247 YKDHRKYQS---RFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLG 303
+ +H ++QS + L+ L + ++AL++ +M G PD+ Y+ TL
Sbjct: 194 FDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG-FGCEPDIVTYN----TLI 248
Query: 304 QAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWV 363
Q LN M + K+ + PD+V Y ++++ + + + S +
Sbjct: 249 QGFCKSNELNKASEMFKDVKS---------GSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 364 FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWK 423
+ + G+ P T+ + ++ ++G E+ G++ G P+ +T+ L+ + +
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW------------QDAIPE--- 468
G+V + EM RG+ A Y L LC R +D IP+
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 469 --------------------VEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
VE++ + + +P ++TFT +I G + + IF M
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEK-KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 509 -KDHCSPNIGTINTMLKV 525
CSP+ T++++L
Sbjct: 479 VAIGCSPDKITVSSLLSC 496
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 129/318 (40%), Gaps = 54/318 (16%)
Query: 247 YKDHRKYQS---RFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLG 303
+ +H ++QS + L+ L + ++AL++ +M G PD+ Y+ TL
Sbjct: 194 FDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG-FGCEPDIVTYN----TLI 248
Query: 304 QAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWV 363
Q LN M + K+ + PD+V Y ++++ + + + S +
Sbjct: 249 QGFCKSNELNKASEMFKDVKS---------GSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 364 FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWK 423
+ + G+ P T+ + ++ ++G E+ G++ G P+ +T+ L+ + +
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW------------QDAIPE--- 468
G+V + EM RG+ A Y L LC R +D IP+
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 469 --------------------VEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
VE++ + + +P ++TFT +I G + + IF M
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEK-KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 509 -KDHCSPNIGTINTMLKV 525
CSP+ T++++L
Sbjct: 479 VAIGCSPDKITVSSLLSC 496
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 22/272 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+T + A+ K+A+ IF LM+ + + + +LG+A L KE + +
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 289
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+K++ P+++ Y +LN + + ++ + GLKP+
Sbjct: 290 LKER---------------FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 334
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
+ + +E ++S +LF ++ G P +Y +++R F K+ ++ A+E +M
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQ--DAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
G+ A+VY C + +G + D + E+ K + P T+ +IK +
Sbjct: 395 VDSGLQPDAAVY---TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Query: 496 GHIDDCACIFECM-KDHCSPNIGTINTMLKVY 526
+ I+ M ++ P+I T N ++K Y
Sbjct: 452 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT ++ K + A++ F+ M + + PD A Y + G L + +++ M
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
++K PD YNA++ K + + ++ ++ ++ ++P+ T
Sbjct: 430 QEKGHP--------------PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 475
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
+ + M+ + NY++ ++ ++ + G P+ +Y VL+R EGK EA + EM
Sbjct: 476 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 535
Query: 439 KRGV 442
+G+
Sbjct: 536 DKGM 539
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 155/367 (42%), Gaps = 36/367 (9%)
Query: 180 RSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALS 239
RS+ +L + + E+ LS L +L+ + + L IL G+ G W+ +
Sbjct: 61 RSKRHSNSYLARKSAISEVQRSSDFLSSLQRLATVLKVQ-DLNVILRDFGISGRWQDLIQ 119
Query: 240 VVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLM---RGNIDVYPDMAAYH 296
+ +W+ + H K S Y+ + +G A+ +AL+I+ + I+VY +
Sbjct: 120 LFEWM---QQHGKI-SVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVY----ICN 170
Query: 297 SIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQ 356
SI L + G L + + + MK+ ++PD+V YN +L C+ K
Sbjct: 171 SILSCLVKNGKLDSCIKLFDQMKRDG--------------LKPDVVTYNTLLAGCIKVKN 216
Query: 357 -WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
+ + +L +G++ + YG + + +G + Q++ G P Y
Sbjct: 217 GYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYS 276
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC---YYGRWQDAIPEVEKI 472
L+ ++ +G +A E + EM+ G++ + L + R ++ + E+E
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESA 336
Query: 473 RRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINT-MLKVYGQNDK 531
P + G+ K+ G +++ IF+ MK + G N+ M+ ++ +
Sbjct: 337 GYAENEMPYCMLMDGLSKA----GKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKR 392
Query: 532 FSKAKFL 538
F +AK L
Sbjct: 393 FKEAKEL 399
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 20/272 (7%)
Query: 258 VYTKLLAVLGKARR--PKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
Y LLA K + PK I L I + D Y ++ G +E N +
Sbjct: 203 TYNTLLAGCIKVKNGYPKAIELIGELPHNGIQM--DSVMYGTVLAICASNGRSEEAENFI 260
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
+ MK + + P+I Y+++LN+ +K + ++K GL PN
Sbjct: 261 QQMKVEGHS--------------PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPN 306
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
++V ++ G +D EL ++ +G + Y +L+ K GK++EA
Sbjct: 307 KVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFD 366
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
+M+ +GV + LC R+++A E+ + + V M+ +
Sbjct: 367 DMKGKGVRSDGYANSIMISALCRSKRFKEA-KELSRDSETTYEKCDLVMLNTMLCAYCRA 425
Query: 496 GHIDDCACIFECMKDHC-SPNIGTINTMLKVY 526
G ++ + + M + SP+ T + ++K +
Sbjct: 426 GEMESVMRMMKKMDEQAVSPDYNTFHILIKYF 457
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 237 ALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYH 296
AL +W + SR Y L L RR Q+ + M +I + PD A +
Sbjct: 59 ALETFRWASTFPGF--IHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFV 116
Query: 297 SIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQ 356
+I G+A L+K ++++V+ + KF I+P + ++N++L+ V
Sbjct: 117 TIIRGFGRARLIKRVISVVDLVS------KFG--------IKPSLKVFNSILDVLVKEDI 162
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
+ +++ SG+ + TYG+ M+ + +L ++ SG P A+ Y
Sbjct: 163 DIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNT 222
Query: 417 LVRTFWKEGKVDEAVEAIREMEK 439
L+ K GKV A + EM++
Sbjct: 223 LLHALCKNGKVGRARSLMSEMKE 245
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 97/254 (38%), Gaps = 20/254 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ Y L+ L R + ++ +M+ + V P+ Y+++ L + G + +++
Sbjct: 183 YTYGILMKGLSLTNRIGDGFKLLQIMKTS-GVAPNAVVYNTLLHALCKNGKVGRARSLMS 241
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
MK EP+ V +N +++A ++ + ++ G P+
Sbjct: 242 EMK------------------EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDV 283
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
T MEV G E+ ++ G + + LV+ + GK+ A E
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIE 343
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
ME++G + Y L C G A+ ++ R TF +I+ GG
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT-DAIRWNFATFNTLIRGLSIGG 402
Query: 497 HIDDCACIFECMKD 510
DD I E M+D
Sbjct: 403 RTDDGLKILEMMQD 416
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 11/232 (4%)
Query: 317 CMKQK-PKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
C +QK F + W I P +V +N++++ F + K GL P+
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDI-GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
++ + + G+ EL + + G P+++TY +L + F G + A E IR
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR----LPRARPLEVTFTGMIKS 491
+M +G+ Y L C C G + ++ + L P V +G+ K+
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 492 SMDGGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
G ID+ +F MK D SP++ + ++ + KF A +L++E+
Sbjct: 377 ----GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 36/244 (14%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+EPD V YN + G V + + GL P+ TY + + Q GN D+
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 397 ELF-GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
L + R E+ + V++ K G++DEA+ +M+ G+ Y +
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 456 LCYYGRWQDAI---PEVEKIRRLPRARPLEVTFTGMIKSSM------------------- 493
LC G++ A+ E+ R LP +R G+ + M
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 494 --------DG----GHIDDCACIFEC-MKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
DG G I++ +F+ ++ +P++ T N+++ Y + ++A+ + +
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 541 EVKV 544
+K+
Sbjct: 528 VIKL 531
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 11/232 (4%)
Query: 317 CMKQK-PKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
C +QK F + W I P +V +N++++ F + K GL P+
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDI-GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
++ + + G+ EL + + G P+++TY +L + F G + A E IR
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR----RLPRARPLEVTFTGMIKS 491
+M +G+ Y L C C G + ++ + L P V +G+ K+
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 492 SMDGGHIDDCACIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
G ID+ +F MK D SP++ + ++ + KF A +L++E+
Sbjct: 377 ----GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 36/244 (14%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+EPD V YN + G V + + GL P+ TY + + Q GN D+
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 397 ELF-GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
L + R E+ + V++ K G++DEA+ +M+ G+ Y +
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 456 LCYYGRWQDAI---PEVEKIRRLPRARPLEVTFTGMIKSSM------------------- 493
LC G++ A+ E+ R LP +R G+ + M
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 494 --------DG----GHIDDCACIFEC-MKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
DG G I++ +F+ ++ +P++ T N+++ Y + ++A+ + +
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 541 EVKV 544
+K+
Sbjct: 528 VIKL 531
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 168/420 (40%), Gaps = 67/420 (15%)
Query: 178 QKRSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLL---RILEMLGLRGCW 234
Q+ S+V+ +L +L + I + L R++ FTE + ++L M GC
Sbjct: 74 QQGSKVKRSTYL--KLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCI 131
Query: 235 KQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAA 294
A V D + ++ F ++ ++ + R +E ++F LM + V PD
Sbjct: 132 ADARKVF-------DSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD-GVLPDDFL 183
Query: 295 Y-------------------HSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDP 335
+ HS+ + LG + L+ + N + + K F +K +
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR-VSNSILAVYAKCGELDFA-TKFFRR 241
Query: 336 IIEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDL 394
+ E D++ +N+VL A C K + V V K+++K G+ P T+ + + Q G D
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELV-KEMEKEGISPGLVTWNILIGGYNQLGKCDA 300
Query: 395 VHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTA-SVYYELA 453
+L ++ G + T+ ++ G +A++ R+M GV+ A ++ ++
Sbjct: 301 AMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Query: 454 CCLCY---------------YGRWQDA------IPEVEKIRRLPRARPL--------EVT 484
C C G D + K +L AR + T
Sbjct: 361 ACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT 420
Query: 485 FTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ MI G+ +F M+D + PNI T NTM+ Y +N +A LF+ ++
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRME 480
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 122/280 (43%), Gaps = 36/280 (12%)
Query: 296 HSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYS-KNWDPIIEPDIVIYNAVLNACVPS 354
HSIAV +G + ++L + K K + + K +D + D+ +N+++ +
Sbjct: 375 HSIAVKMG---FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA 431
Query: 355 KQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP-EALT 413
+F +++ + L+PN T+ + +++G+ +LF ++ + G+V T
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 414 YKVLVRTFWKEGKVDEAVEAIREME-KRGVIGTASVYYELACCL-------------CYY 459
+ +++ + + GK DEA+E R+M+ R + + ++ L C C
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 460 GRWQDAIPEVEKIRRLPRARPLEV-----TFTGM------IKSSMDGGHI-----DDCAC 503
R DAI V+ A+ ++ F GM +S+ GG++
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALA 611
Query: 504 IFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
+F MK +PN GT+++++ +G + K +F +
Sbjct: 612 LFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSI 651
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 17/251 (6%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+ Y LL L K + + + MR + DV PD+ ++ + + + L+E + +V
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLV- 253
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPN 375
SK + +PD +YN ++ C SK + V V+K++K+ G++P+
Sbjct: 254 -------------SKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG-VYKKMKEEGVEPD 299
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TY + ++G + + +G P+ TY L+ ++G+ A+ +
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
EME RG Y L LC R D E+ ++ + + + +++S +
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLC-KARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKS 418
Query: 496 GHIDDCACIFE 506
G + + +F+
Sbjct: 419 GKVAEAYEVFD 429
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 15/200 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
F+Y ++ + EA+ ++ M+ V PD Y+++ L +AG ++E ++
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEE-GVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M D EPD Y +++N + G + ++++ G PN
Sbjct: 325 TM--------------VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + ++ D EL+ ++ SG E+ Y LVR+ K GKV EA E
Sbjct: 371 CTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDY 430
Query: 437 MEKRGVIGTASVYYELACCL 456
+ AS Y L L
Sbjct: 431 AVDSKSLSDASAYSTLETTL 450
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 132/331 (39%), Gaps = 34/331 (10%)
Query: 236 QALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAY 295
A+ + + Y++ R +S F+ L+ GKA +A+ +F+ + + D + +
Sbjct: 98 DAVDQILRLVRYRNVRCRESLFM--GLIQHYGKAGSVDKAIDVFHKIT-SFDCVRTIQSL 154
Query: 296 HSIAVTLGQAGLL---KELLNIVECMKQKPKTFKFKY--------------SKNWDPIIE 338
+++ L G L K + + M+ +P + F K +D ++E
Sbjct: 155 NTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE 214
Query: 339 ----PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDL 394
P +V YN+++ + + + + K ++PN T+GL M+ G Y+
Sbjct: 215 MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 395 VHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELAC 454
+L + G P + Y +L+ K G++DEA + EM+KR + +Y L
Sbjct: 275 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 455 CLCYYGRWQDAIPEVEKI---RRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM--K 509
LC R +PE ++ ++ +P T+ MI D + M
Sbjct: 335 HLCTECR----VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLAS 390
Query: 510 DHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
HC P T M+ + A F+ E
Sbjct: 391 RHC-PTPATFVCMVAGLIKGGNLDHACFVLE 420
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 20/236 (8%)
Query: 275 ALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWD 334
A ++F+ M ++V P + Y+S+ L + + + +++E M +K
Sbjct: 205 ACKVFDEML-EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKR------------ 251
Query: 335 PIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDL 394
I P+ V + ++ ++ + ++ G KP YG+ M + G D
Sbjct: 252 --IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 395 VHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELAC 454
L G++++ P+ + Y +LV E +V EA + EM+ +G A+ Y +
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 455 CLCYYGRWQDAIPEVEKIRRLPRAR--PLEVTFTGMIKSSMDGGHIDDCACIFECM 508
C R +D + + + +R P TF M+ + GG++D + E M
Sbjct: 370 GFC---RIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
P + Y + LG+ G + E ++ MK++ I+PD+VIYN ++N
Sbjct: 289 PGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR--------------IKPDVVIYNILVN 334
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
+ V +++ G KPN ATY + ++ + ++D + + S P
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY--GRWQDAIP 467
T+ +V K G +D A + M K+ + + + L LC G + +A+
Sbjct: 395 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALS 454
Query: 468 EVEKI 472
EV I
Sbjct: 455 EVISI 459
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR-RSGEVPEALTYKVLVRTF 421
+F Q ++ G + + +Y + +S N+D V ++ +R R+ E+L + L++ +
Sbjct: 68 LFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL-FMGLIQHY 126
Query: 422 WKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPL 481
K G VD+A++ ++ + T L L G + A + + + R RP
Sbjct: 127 GKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM-RLRPN 185
Query: 482 EVTFTGMIKSSMDGGHIDDC----AC-IF-ECMKDHCSPNIGTINTMLKVYGQNDKFSKA 535
V+F +IK G +D C AC +F E ++ P++ T N+++ +ND KA
Sbjct: 186 SVSFNILIK-----GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 536 KFLFEEV 542
K L E++
Sbjct: 241 KSLLEDM 247
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 136/332 (40%), Gaps = 22/332 (6%)
Query: 214 LPFTEGQLLRILEMLGLRGCWKQALSVVQWVY-NYKDHRKYQSRFVYTKLLAVLGKARRP 272
P T +++ G G ++ L WV+ K++ + + Y L+ L A
Sbjct: 183 FPMTVSAANALIKSFGKLGMVEELL----WVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 238
Query: 273 KEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKN 332
A ++F +M + PD+ Y+++ +AG ++ + + M+ +
Sbjct: 239 DSAERVFEVMESG-RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGH--------- 288
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
E D + Y ++ AC + +++++ + G++ + L + + G
Sbjct: 289 -----EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKL 343
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
+ + +F + R G P Y VL+ + K G V++A+ + M G Y +
Sbjct: 344 NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVV 403
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH- 511
LC GR ++A+ R A + ++ +I G +D+ +FE M +
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAIN-SMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 512 CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
C+ + N ++ + ++ K +A LF+ ++
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 91/220 (41%), Gaps = 19/220 (8%)
Query: 223 RILEMLGLRGCWKQA-LSVVQWVYNYKDHRKYQ-SRFVYTKLLAVLGKARRPKEALQIF- 279
+I M ++ C+ + +Y D + Q ++ ++ L K + E +F
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 280 NLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEP 339
N++R P++A Y + ++G +++ + ++ M D +P
Sbjct: 352 NMIRKGSK--PNVAIYTVLIDGYAKSGSVEDAIRLLHRM--------------IDEGFKP 395
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D+V Y+ V+N + + + F + GL N Y ++ ++G D LF
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEK 439
++ G ++ Y L+ F K KVDEA+ + ME+
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P +V Y +++ + S G + + +K SG PN Y + + Q G + +L
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
++ SG P +TY V+V+ + GK+D A+E +R M +RG
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 14/207 (6%)
Query: 260 TKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMK 319
T LL + ++AL++F++M + P+ +Y + L + G L+E + + M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 320 QKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATY 379
+K +P Y ++ A +F ++ G KPN TY
Sbjct: 294 EKG--------------CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 380 GLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEK 439
+ ++ + G + + + ++ + P +TY L+ + K+G+V A E + MEK
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 440 RGVIGTASVYYELACCLCYYGRWQDAI 466
R + EL LC G+ A+
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAV 426
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 11/220 (5%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSI-AVTLGQAGLLKELLNI 314
+Y ++ KA + A+ IF M N++ P + YH + LG+ +N
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGN--NSYINH 266
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS-GLK 373
V +T + + + D IEPD+ N ++ V S +F Q+ +
Sbjct: 267 VYM-----ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCE 321
Query: 374 PNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
PN TY + G EL +++ G VP +Y LV F G++D+AV+
Sbjct: 322 PNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKC 381
Query: 434 IREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR 473
+ EM + G + Y L C G++ +A +E +R
Sbjct: 382 LWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 421
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 15/216 (6%)
Query: 254 QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLN 313
F YT +L + G+A R + +F+LM+ V D Y S+ + +G + +
Sbjct: 120 HDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEK-GVLIDTVTYTSLIHWVSSSGDVDGAMR 178
Query: 314 IVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLK 373
+ E M+ D EP +V Y A + + + + V+K++ +S +
Sbjct: 179 LWEEMR--------------DNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVS 224
Query: 374 PNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
PN TY + ME + +G + ++F +++ G P+ +L+ K G+
Sbjct: 225 PNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRV 284
Query: 434 IREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ M++ GV+ ++ E L G D + EV
Sbjct: 285 LVYMKENGVVLRYPIFVEALETLKAAGESDDLLREV 320
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 6/210 (2%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D+VI+N ++ + F ++ G +P+ T + QSG D+ E+
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
I G L+ + K G ++ A + R V S + CL +
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS----MISCLAIH 353
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGT 518
G+ ++A+ + L +P E+TF ++ + + GG + + IF MK PN+
Sbjct: 354 GKGKEALEMFSTMESLD-LKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKH 412
Query: 519 INTMLKVYGQNDKFSKAKFLFEEVKVATSD 548
++ + G++ K +A L +E+ V +D
Sbjct: 413 FGCLIHLLGRSGKLKEAYRLVKEMHVKPND 442
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 278 IFNLMRGNIDVYPDMA----AYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNW 333
+ NL+ G I+ PD+ A H+I V QA +L L + ++ KF+ S+
Sbjct: 99 VSNLLDGFIENRPDLKSERFAAHAI-VLYAQANMLDHSLRVFRDLE------KFEISRTV 151
Query: 334 DPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS-GLKPNGATYGLAMEVTMQSGNY 392
+ NA+L AC+ +K +K V+ ++ K G++P+ TY ++V +SG+
Sbjct: 152 KSL--------NALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSA 203
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
+ + ++ R G P + ++ +++ F+ E K DE + + M+ RGV S Y
Sbjct: 204 SSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIR 263
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH- 511
LC + ++A ++ + +P VT++ +I + ++ +F+ M +
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLS-AGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG 322
Query: 512 CSPNIGTINTMLKVYGQNDKFSKAKFLFEE 541
C P+ T++ + F A L +E
Sbjct: 323 CKPDSECYFTLIYYLCKGGDFETALSLCKE 352
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 157/383 (40%), Gaps = 53/383 (13%)
Query: 189 LVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEML----GLRGCWKQALSVVQWV 244
L E LS I + R++K + F+ G ++ LE +RG + + S+ +
Sbjct: 58 LKESLSSSGIHLSKDLIDRVLK--RVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTML 115
Query: 245 YNYKDHRKYQS---RFVYTK-----------LLAVLGKARR---PKEALQIFNLMRGNID 287
Y +RK+ + TK + VLG+ + ++ ++ F + +
Sbjct: 116 YILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVP 175
Query: 288 VYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAV 347
+ D A ++++ TL Q + + N+ +K + +PD+ +N +
Sbjct: 176 DFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ---------------FQPDLQTFNIL 220
Query: 348 LNACVPSKQWKGVSWVFKQ---LKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRR 404
L+ WK +K GLKP+ TY ++V + + ++L ++R
Sbjct: 221 LSG------WKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMRE 274
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
E P+ +TY ++ G+ D+A E ++EM++ G + Y C R D
Sbjct: 275 EEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGD 334
Query: 465 A---IPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINT 521
A + E+ K P A + F ++ + D G + + C PN +
Sbjct: 335 ADKLVDEMVKKGLSPNATTYNLFFR-VLSLANDLGR--SWELYVRMLGNECLPNTQSCMF 391
Query: 522 MLKVYGQNDKFSKAKFLFEEVKV 544
++K++ +++K A L+E++ V
Sbjct: 392 LIKMFKRHEKVDMAMRLWEDMVV 414
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 15/184 (8%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y L+ V K R ++A ++ + MR + PD+ Y ++ LG G + +++
Sbjct: 248 TYNSLIDVYCKDREIEKAYKLIDKMREEEET-PDVITYTTVIGGLGLIGQPDKAREVLKE 306
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
MK+ PD+ YNA + +++ + ++ K GL PN
Sbjct: 307 MKEYG--------------CYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY L V + + EL+ ++ + +P + L++ F + KVD A+ +M
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Query: 438 EKRG 441
+G
Sbjct: 413 VVKG 416
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 25/221 (11%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNID--VYPDMAAYHSIAVTLGQAGLLKELLNIV 315
+YT L+ K R + ++ MR D +PD Y ++ AGL+ ++
Sbjct: 416 IYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 316 ECM----------------KQKPKTFKFKYSKNW------DPIIEPDIVIYNAVLNACVP 353
M K K + +++ D IEPD+V YN +++ C+
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL 535
Query: 354 SKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP-EAL 412
G F +++ G+ P +Y M+ SG L + +F ++ V + +
Sbjct: 536 IDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLI 595
Query: 413 TYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELA 453
+ +LV + + G +++A + M++ G + Y LA
Sbjct: 596 AWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLA 636
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
YT L+ L K R +AL++ + M+ N V D+ AY ++
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMK-NKGVKLDIPAYGALIDGF-------------- 664
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
C + ++ +S+ + + P IYN++++ ++K++ K GL+ +
Sbjct: 665 CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY ++ ++ GN L EL+ +++ G VP+ + Y V+V K+G+ + V+ E
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 437 MEKRGVIGTASVY 449
M+K V +Y
Sbjct: 785 MKKNNVTPNVLIY 797
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 84/205 (40%), Gaps = 1/205 (0%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
++ + N +L+ + + + +++ G+ PN +Y M + N DL +F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
I G P TY +L+ ++ A+E + M + VY + LC
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGT 518
G+ A + + R +++ +I G +D +E M + SPN+ T
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVIT 621
Query: 519 INTMLKVYGQNDKFSKAKFLFEEVK 543
+++ +N++ +A + +E+K
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMK 646
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 102/252 (40%), Gaps = 16/252 (6%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y ++ K A+ + M GN + P++ Y S+ L + + + L + + M
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGN-GISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
K K ++ DI Y A+++ + S +F +L + GL P+
Sbjct: 646 KNKG--------------VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI 691
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y + GN +L+ ++ + G + TY L+ K+G + A E EM+
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 439 KRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHI 498
G++ +Y + L G++ + E++++ P + + +I G++
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK-NNVTPNVLIYNAVIAGHYREGNL 810
Query: 499 DDCACIFECMKD 510
D+ + + M D
Sbjct: 811 DEAFRLHDEMLD 822
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 19/246 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
Y L+ + RR + A+++ M+ ++ + ++ I LG+AG L E L ++E
Sbjct: 287 TYGTLIEGYCRMRRVQIAMEVLEEMKM-AEMEINFMVFNPIIDGLGEAGRLSEALGMME- 344
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+F ++ P IV YN+++ + G S + K + G+ P
Sbjct: 345 --------RFFVCESG-----PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTT 391
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + + + L+ ++ +G P+ LTY ++++ ++GK+ A++ +EM
Sbjct: 392 TYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEM 451
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEK-IRRLPRARPLEVTFTGMIKSSMDGG 496
+ RG+ L LC ++A E + +RR P +TF MI + +
Sbjct: 452 KNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRR--GIIPQYITFK-MIDNGLRSK 508
Query: 497 HIDDCA 502
+ D A
Sbjct: 509 GMSDMA 514
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 146/343 (42%), Gaps = 41/343 (11%)
Query: 213 GLP--FTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKAR 270
GLP G L+R ++ W +++W+ Y++ + S + L+ GK
Sbjct: 100 GLPRDLVLGTLVRFKQL----KKWNLVSEILEWL-RYQNWWNF-SEIDFLMLITAYGKLG 153
Query: 271 RPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYS 330
A ++ +++ + P++ +Y ++ + G+ G N E + F+
Sbjct: 154 NFNGAERVLSVL-SKMGSTPNVISYTALMESYGRGGKC----NNAEAI--------FRRM 200
Query: 331 KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQL---KKSGLKPNGATYGLAMEVTM 387
++ P EP + Y +L V ++K VF+ L KKS LKP+ Y + + +
Sbjct: 201 QSSGP--EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 388 QSGNYDLVHELFGQIRRSGEVPEALTYKVLV--RTFWKEGKVDEAVEAIREMEKRGVIGT 445
++GNY+ ++F + G +TY L+ T +KE V I + +R I
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE------VSKIYDQMQRSDIQP 312
Query: 446 ASVYYELACCLCYYGRW---QDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCA 502
V Y A + YGR ++A+ E++ RP + ++ + G ++
Sbjct: 313 DVVSY--ALLIKAYGRARREEEALSVFEEMLD-AGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 503 CIFECMK-DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
+F+ M+ D P++ + TML Y A+ F+ +KV
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ G+ARR +EAL +F M + V P AY+ + +G++++ + + M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
++ I PD+ Y +L+A V + +G FK++K G +PN T
Sbjct: 376 RRDR--------------IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSG 406
YG ++ ++ + + + E++ ++R SG
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSG 449
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 18/195 (9%)
Query: 254 QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLN 313
QS Y L++ KE +I++ M+ + D+ PD+ +Y + G+A +E L+
Sbjct: 280 QSTVTYNSLMSF---ETSYKEVSKIYDQMQRS-DIQPDVVSYALLIKAYGRARREEEALS 335
Query: 314 IVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLK 373
+ E M D + P YN +L+A S + VFK +++ +
Sbjct: 336 VFEEM--------------LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 374 PNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
P+ +Y + + + + + + F +I+ G P +TY L++ + K V++ +E
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 434 IREMEKRGVIGTASV 448
+M G+ ++
Sbjct: 442 YEKMRLSGIKANQTI 456
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 338 EPDIVIYNAVLNACVPSKQW-KGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
E D+ +NA+L AC + + + VS + + + ++PN T + Q+G L
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ R + LV + K G ++EA + K+ + + + + C
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL----TAWNSMINCF 336
Query: 457 CYYGRWQDAIPEVEKIRRL--PRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH--C 512
+GR ++AI E++ +L +P +TF G++ + GG + F+ M +
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGI 396
Query: 513 SPNIGTINTMLKVYGQNDKFSKA 535
P I ++ + G+ +F +A
Sbjct: 397 EPRIEHYGCLIDLLGRAGRFDEA 419
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
++P + +LN+ V + V +FK++ K G+ N Y + + +SG+ +
Sbjct: 164 LKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAE 223
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+L ++ G P+ TY L+ + K+ EA+ ME+ GV Y
Sbjct: 224 KLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGF 283
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPN 515
GR ++A +I+ A VT+T +I ID+ + E M+ SP
Sbjct: 284 SREGRMREATRLFREIKDDVTAN--HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPG 341
Query: 516 IGTINTMLKVYGQNDKFSKAKFLFEEV 542
+ T N++L+ ++ + +A L E+
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEM 368
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
VF+Q++ GLKP+ + + ++ D V ++F ++ + G V Y VLV
Sbjct: 155 VFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACS 214
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLE 482
K G ++A + + EME++GV Y L C +A+ +++ R A P
Sbjct: 215 KSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA-PNI 273
Query: 483 VTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQNDKFSKA 535
VT+ I G + + +F +KD + N T T++ Y + + +A
Sbjct: 274 VTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEA 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 105/255 (41%), Gaps = 26/255 (10%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT L+ + EAL++ +M P + Y+SI L + G ++E ++ M
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESR-GFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
K IEPD + N ++NA + V K++ +SGLK + +
Sbjct: 369 SGKK--------------IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 379 Y-----GLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
Y G + +++ ELF I + G P TY LV F+ + K DE +
Sbjct: 415 YKALIHGFCKVLELENAK----EELFSMIEK-GFSPGYATYSWLVDGFYNQNKQDEITKL 469
Query: 434 IREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSM 493
+ E EKRG+ ++Y L +C + A E + + V FT M +
Sbjct: 470 LEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGD-SVIFTTMAYAYW 528
Query: 494 DGGHIDDCACIFECM 508
G + + + +F+ M
Sbjct: 529 RTGKVTEASALFDVM 543
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 331 KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG 390
K +D + E D+V + V+ + + +F ++ + N T+ + ++S
Sbjct: 67 KLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSK 123
Query: 391 NYDLVHELFGQIRRSGEVPE--ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASV 448
+ LF E+PE +++ ++ + + G++D+A+E EM +R ++
Sbjct: 124 QLSIAEMLFQ------EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS---- 173
Query: 449 YYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
+ + L GR +A+ E R+PR R + V++T M+ G +D+ +F+CM
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFE---RMPR-RDV-VSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 509 KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
+ NI + N M+ Y QN++ +A LF+
Sbjct: 229 PER---NIISWNAMITGYAQNNRIDEADQLFQ 257
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y ++ L K+ R A ++F M+ + P + + S+ ++G+AG L + + M
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKER-KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+ F + P ++ +++++ + + ++ ++KKSG +PN
Sbjct: 375 Q------GFGH--------RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y + +E +SG ++ +F + ++G +P TY L+ G+VD A++ M
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 439 KRGVIGTASVYYELACCLC 457
G+ S Y L L
Sbjct: 481 NAGLRPGLSSYISLLTLLA 499
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
Query: 344 YNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
YN V+ +++ + FK+ ++SG K + TY M + + G E++ +
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQ 463
++ + + TY++++ + K G++D A + ++M++R + + SV+ L + GR
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 464 DAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTM 522
++ +++ RP F +I S G +D +++ M K PN G +
Sbjct: 366 TSMKVYMEMQGFGH-RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 523 LKVYGQNDKFSKAKFLFEEVKVA 545
++ + ++ K A +F++++ A
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKA 447
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 251 RKYQSRF-VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLK 309
RK + F V++ L+ +GKA R +++++ M+G P + S+ + +AG L
Sbjct: 342 RKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG-FGHRPSATMFVSLIDSYAKAGKLD 400
Query: 310 ELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKK 369
L + + MK+ P+ +Y ++ + S + + VFK ++K
Sbjct: 401 TALRLWDEMKKSG--------------FRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 370 SGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDE 429
+G P +TY +E+ SG D +++ + +G P +Y L+ + VD
Sbjct: 447 AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDV 506
Query: 430 AVEAIREMEKRG 441
A + + EM+ G
Sbjct: 507 AGKILLEMKAMG 518
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
Y L+ G+ARR +EAL +F M + V P AY+ + +G++++ + + M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
++ I PD+ Y +L+A V + +G FK++K G +PN T
Sbjct: 383 RRDR--------------IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
YG ++ ++ + + + E++ ++R SG ++ + A+ +EME
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME 488
Query: 439 KRGV 442
GV
Sbjct: 489 SCGV 492
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 137/320 (42%), Gaps = 35/320 (10%)
Query: 234 WKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMA 293
W +++W+ Y++ + S + L+ GK A ++ +++ + P++
Sbjct: 126 WNLVSEILEWL-RYQNWWNF-SEIDFLMLITAYGKLGNFNGAERVLSVL-SKMGSTPNVI 182
Query: 294 AYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVP 353
+Y ++ + G+ G N E + F+ ++ P EP + Y +L V
Sbjct: 183 SYTALMESYGRGGKC----NNAEAI--------FRRMQSSGP--EPSAITYQIILKTFVE 228
Query: 354 SKQWKGVSWVFKQL---KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
++K VF+ L KKS LKP+ Y + + + ++GNY+ ++F + G
Sbjct: 229 GDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS 288
Query: 411 ALTYKVLV--RTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRW---QDA 465
+TY L+ T +KE V I + +R I V Y A + YGR ++A
Sbjct: 289 TVTYNSLMSFETSYKE------VSKIYDQMQRSDIQPDVVSY--ALLIKAYGRARREEEA 340
Query: 466 IPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGTINTMLK 524
+ E++ RP + ++ + G ++ +F+ M+ D P++ + TML
Sbjct: 341 LSVFEEMLD-AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 525 VYGQNDKFSKAKFLFEEVKV 544
Y A+ F+ +KV
Sbjct: 400 AYVNASDMEGAEKFFKRIKV 419
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 18/195 (9%)
Query: 254 QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLN 313
QS Y L++ KE +I++ M+ + D+ PD+ +Y + G+A +E L+
Sbjct: 287 QSTVTYNSLMSF---ETSYKEVSKIYDQMQRS-DIQPDVVSYALLIKAYGRARREEEALS 342
Query: 314 IVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLK 373
+ E M D + P YN +L+A S + VFK +++ +
Sbjct: 343 VFEEM--------------LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 374 PNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
P+ +Y + + + + + + F +I+ G P +TY L++ + K V++ +E
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 434 IREMEKRGVIGTASV 448
+M G+ ++
Sbjct: 449 YEKMRLSGIKANQTI 463
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I+PD+ +Y+A++ + VF ++ K + N ++ Q GN+ +
Sbjct: 322 IDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAY 381
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+LF + R + + + Y V K GKV+EA+E REM +G+ Y L
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGC 441
Query: 457 CYYGRWQDA 465
C G+ DA
Sbjct: 442 CLQGKCSDA 450
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 115/294 (39%), Gaps = 31/294 (10%)
Query: 255 SRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
R Y LGK + +EA+++F M G + PD+ Y ++ G + ++
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGK-GIAPDVINYTTLIGGCCLQGKCSDAFDL 453
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
+ M KT PDIVIYN + + + K ++ G+KP
Sbjct: 454 MIEMDGTGKT--------------PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
T+ + +E + +G D + + +A +V+ F G +D A E
Sbjct: 500 TYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----SMVKGFCAAGCLDHAFERF 555
Query: 435 REMEKRGVIGTASVYYELACCLC----YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIK 490
+E SVY+ L LC Y + QD + + K+ P + + +I
Sbjct: 556 IRLE---FPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL----GVEPEKSMYGKLIG 608
Query: 491 SSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
+ ++ FE + P++ T M+ Y + ++ +A LFE++K
Sbjct: 609 AWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMK 662
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
+ VI +++L + +FK+ +++ + + Y +A + + G + ELF
Sbjct: 360 NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
++ G P+ + Y L+ +GK +A + + EM+ G +Y LA L
Sbjct: 420 REMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATN 479
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPN 515
G Q+A E K+ +P VT +I+ +D G +D +E ++ N
Sbjct: 480 GLAQEAF-ETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREN 534
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 23/255 (9%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y KL+ + ++A + F ++ + PD+ Y + T + K+ + E
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTK-KIVPDLFTYTIMINTYCRLNEPKQAYALFED 660
Query: 318 MKQ---KPKTFKFKYSKNWDPIIE-----------PDIVIYNAVLNACVPSKQWKGVSWV 363
MK+ KP + N DP ++ PD+V Y ++N K V +
Sbjct: 661 MKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYAL 720
Query: 364 FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWK 423
FK +K+ + P+ TY + ++ + L +++ P+ Y VL+ K
Sbjct: 721 FKDMKRREIVPDVVTYTVLLKNKPE-------RNLSREMKAFDVKPDVFYYTVLIDWQCK 773
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEV 483
G + EA +M + GV A+ Y L C C G ++A +++ +P V
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE-SGVKPDVV 832
Query: 484 TFTGMIKSSMDGGHI 498
+T +I G +
Sbjct: 833 PYTALIAGCCRNGFV 847
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 95/211 (45%), Gaps = 19/211 (9%)
Query: 232 GCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPD 291
GC+ AL + + K + + L+ L K R KEAL++ + M V P
Sbjct: 166 GCFDDALKLFDEMVKKKVK---PTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPT 222
Query: 292 MAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKY-SKNWDPIIEPDIVIYNAVLNA 350
+ Y S+ L Q G L +F FK + ++ I+ D IY+ ++++
Sbjct: 223 VHIYASLIKALCQIGEL---------------SFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+ + + VS + +++ + G KP+ TY + + + + + + ++ G P+
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
++Y +++ F++ K +EA +M +RG
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRG 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 373 KPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
KP+ TY + + QSG +D +LF ++ + P +T+ L+ K+ +V EA++
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 433 AIREMEK-RGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
+M K GV T +Y L LC G A ++ + + ++ +I S
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE-GKIKVDAAIYSTLISS 267
Query: 492 SMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYG-QNDKFSKAKFLFEEVK 543
+ G ++ + I E M + C P+ T N ++ + +ND S + L E V+
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 284 GNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVI 343
G I V D A Y ++ +L +AG E+ I+E M +K +PD V
Sbjct: 252 GKIKV--DAAIYSTLISSLIKAGRSNEVSMILEEMSEKG--------------CKPDTVT 295
Query: 344 YNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
YN ++N + + V ++ + GLKP+ +Y + + V + ++ LF +
Sbjct: 296 YNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMP 355
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRG 441
R G P+ L+Y+++ + + +EA + EM +G
Sbjct: 356 RRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D++ YN ++ A +K + +FK +K G P+ TY ++ D +
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
++ SG P TY ++ ++ + G + +AV+ MEK GV VY L
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-HCSPNIGT 518
G ++AI + ++ + + T +IK+ G +++ +++ MKD P++
Sbjct: 634 GMVEEAI-QYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAA 692
Query: 519 INTMLKVYGQNDKFSKAKFLFEEVK 543
N+ML + S+A+ +F ++
Sbjct: 693 SNSMLSLCADLGIVSEAESIFNALR 717
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 109/267 (40%), Gaps = 46/267 (17%)
Query: 317 CMKQKPK--TFKFKYSKNWDPIIE------------PDIVIYNAVLNACVPSKQWKGVSW 362
C+ PK T K W+ ++ P+++ YN VL A + +W +
Sbjct: 107 CLNLSPKEQTVLLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRL 166
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGE---VPEALTYKVLVR 419
+ ++ +G+ P TYG+ ++V ++G LV E I+ G+ P+ +T +VR
Sbjct: 167 CWIEMAHNGVLPTNNTYGMLVDVYGKAG---LVKEALLWIKHMGQRMHFPDEVTMATVVR 223
Query: 420 TF---------------WKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
F W GKVD +++I + K G+A L L
Sbjct: 224 VFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKN---GSAQSPVNLKQFLSMELFKVG 280
Query: 465 AIPEVEKIRRL-------PRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNI 516
A +EK PR L TF +I G ++D A +F E +K +
Sbjct: 281 ARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDT 340
Query: 517 GTINTMLKVYGQNDKFSKAKFLFEEVK 543
T NTM+ G + S+A+ L ++++
Sbjct: 341 VTFNTMIHTCGTHGHLSEAESLLKKME 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 103/253 (40%), Gaps = 15/253 (5%)
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
D+ Y+ + G+A L ++ L++ + MK + W PD YN++
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ---------GTW-----PDECTYNSLFQM 559
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+ ++ SG KP TY + ++ G +L+ + ++G P
Sbjct: 560 LAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPN 619
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE 470
+ Y L+ F + G V+EA++ R ME+ GV V L G ++A +
Sbjct: 620 EVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYD 679
Query: 471 KIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGTINTMLKVYGQND 530
K++ P M+ D G + + IF +++ + ++ + TM+ +Y
Sbjct: 680 KMKD-SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMG 738
Query: 531 KFSKAKFLFEEVK 543
+A + EE++
Sbjct: 739 MLDEAIEVAEEMR 751
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 293 AAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACV 352
+ ++++ G+AG L + N+ M K+ PI D V +N +++ C
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEML-----------KSGVPI---DTVTFNTMIHTCG 351
Query: 353 PSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEAL 412
+ K++++ G+ P+ TY + + + +G+ + E + +IR+ G P+ +
Sbjct: 352 THGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTV 411
Query: 413 TYKVLVRTFWKEGKVDEAVEAIREMEKRGV 442
T++ ++ + V E I EM++ +
Sbjct: 412 THRAVLHILCQRKMVAEVEAVIAEMDRNSI 441
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/366 (18%), Positives = 146/366 (39%), Gaps = 38/366 (10%)
Query: 205 LSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLA 264
S ++K SG+P ++ G G +A S+++ ++ Y LL+
Sbjct: 328 FSEMLK-SGVPIDTVTFNTMIHTCGTHGHLSEAESLLK---KMEEKGISPDTKTYNILLS 383
Query: 265 VLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKT 324
+ A + AL+ + +R + ++PD + ++ L Q ++ E+ ++ M +
Sbjct: 384 LHADAGDIEAALEYYRKIR-KVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN--- 439
Query: 325 FKFKYSKNWDPII--------------------EPDIVIYNAVLNACVPSKQWKGVSWV- 363
+ ++ P+I + D V+ + L A + KG+ WV
Sbjct: 440 -SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGL-WVE 497
Query: 364 -----FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLV 418
+ + SG + + Y + ++ ++ ++ LF ++ G P+ TY L
Sbjct: 498 AETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLF 557
Query: 419 RTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRA 478
+ VDEA + EM G Y + G DA+ E + +
Sbjct: 558 QMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK-TGV 616
Query: 479 RPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKF 537
+P EV + +I + G +++ F M++H N + +++K Y + +A+
Sbjct: 617 KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARR 676
Query: 538 LFEEVK 543
+++++K
Sbjct: 677 VYDKMK 682
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 294 AYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-C- 351
Y+++ +L + GL++E+ K Y++ + ++ PDI +N ++N C
Sbjct: 122 CYNNLLSSLARFGLVEEM--------------KRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 352 ----VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGE 407
V +KQ+ V+W L ++G P+ TY + + D ++F ++ ++G
Sbjct: 168 LGYVVEAKQY--VTW----LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGC 221
Query: 408 VPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIP 467
++Y L+ ++ K+DEA+ + +M+ Y L LC G+ +A+
Sbjct: 222 HRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMN 281
Query: 468 EVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLK 524
+++ +P + +T +I+S G +D+ + + E M ++ PN+ T N ++K
Sbjct: 282 LFKQMSE-SGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 257 FVYTKLLAVLGKARRPK--EALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
F YT + G RR + A ++F M N + + +Y + L +A + E L++
Sbjct: 191 FTYTSFIT--GHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQLIYGLFEAKKIDEALSL 247
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
+ MK D P++ Y +++A S Q +FKQ+ +SG+KP
Sbjct: 248 LVKMK--------------DDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
+ Y + ++ D L + +G +P +TY L++ F K+ V +A+ +
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLL 352
Query: 435 REMEKRGVIGTASVYYELACCLCYYGRWQDA 465
+M ++ ++ Y L C G A
Sbjct: 353 SKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 22/188 (11%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT+L+ L +A++ EAL + M+ + + P++ Y + L +G E +N+ + M
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDD-NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM 286
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+ I+PD +Y ++ + S + + + ++GL PN T
Sbjct: 287 SESG--------------IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVIT 332
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGE---VPEALTYKVLVRTFWKEGKVDEAVEAIR 435
Y ++ + VH+ G + + E VP+ +TY L+ G +D A +
Sbjct: 333 YNALIKGFCKKN----VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLS 388
Query: 436 EMEKRGVI 443
ME+ G++
Sbjct: 389 LMEESGLV 396
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 345 NAVLNACVPSKQWKGVSWVFKQLKKS-GLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
N +LN + ++++ V +FK K+S G+ PN T L ++ + + + +++ +I
Sbjct: 159 NTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIP 218
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQ 463
G VP +TY ++ + G ++ A + EM RG A+ Y L C GR+
Sbjct: 219 SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
Query: 464 DAIPEVEKIRRLPRARPLEVTFTGMIKS 491
+A ++ + + P EVT+ MI++
Sbjct: 279 EAATVMDDMEK-NEIEPNEVTYGVMIRA 305
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 22/288 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAV--TLGQAGLLKELLNIV 315
++ LL G A R + +++IF +R PD S+ TL + + ++V
Sbjct: 122 LFIDLLRNYGLAGRYESSMRIF--LR-----IPDFGVKRSVRSLNTLLNVLIQNQRFDLV 174
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPN 375
M FK SK I P+I N ++ A + V ++ GL PN
Sbjct: 175 HAM--------FKNSKESFGIT-PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPN 225
Query: 376 GATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
TY + + G+ + + ++ G P+A TY VL+ + K G+ EA +
Sbjct: 226 LVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMD 285
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
+MEK + Y + LC + +A +++ L R+ + + + ++
Sbjct: 286 DMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM--LERSFMPDSSLCCKVIDALCE 343
Query: 496 GHIDDCACIF--ECMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEE 541
H D AC + +K++C P+ ++T++ + + ++A+ LF+E
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRS-GEVPEALTYKVLVRTF 421
+F ++ G+K + + + V +Q+ +DLVH +F + S G P T +LV+
Sbjct: 142 IFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKAL 201
Query: 422 WKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRA-RP 480
K+ ++ A + + E+ G++ Y + G + A +E++ L R P
Sbjct: 202 CKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM--LDRGWYP 259
Query: 481 LEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQNDKFSKAKFLF 539
T+T ++ G + A + + M K+ PN T M++ + K +A+ +F
Sbjct: 260 DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMF 319
Query: 540 EEV 542
+E+
Sbjct: 320 DEM 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 89/205 (43%), Gaps = 3/205 (1%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
PD Y +++ ++ + V ++K+ ++PN TYG+ + + +
Sbjct: 259 PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 318
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
F ++ +P++ ++ ++ KVDEA R+M K + ++ L LC
Sbjct: 319 FDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK 378
Query: 459 YGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIG 517
GR +A ++ + + P +T+ +I + G + + +++ M + C PN
Sbjct: 379 EGRVTEARKLFDEFEK--GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 436
Query: 518 TINTMLKVYGQNDKFSKAKFLFEEV 542
T N +++ +N + + EE+
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEM 461
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P++V Y +L V + V +++ G P+ TY + M+ + G + +
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
+ ++ P +TY V++R KE K EA EM +R + +S+ ++ LC
Sbjct: 284 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343
Query: 459 YGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNIGT 518
+ +A K+ + P + +I G + + +F+ + P++ T
Sbjct: 344 DHKVDEACGLWRKMLK-NNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLT 402
Query: 519 INTMLKVYGQNDKFSKAKFLFEEV 542
NT++ + + ++A L++++
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDM 426
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 139/321 (43%), Gaps = 31/321 (9%)
Query: 230 LRGCWKQ---ALSVVQWVYNYKDHRKYQSRF-VYTKLLAVLGKARRPKEALQIFNLMRGN 285
L+ C+K A+ WV K + R +Y +L++ G+AR ++ + M N
Sbjct: 162 LKRCFKVPHLAMRFFNWV---KQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKN 218
Query: 286 IDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYN 345
D+ + + G+A + + L + E M++ E D YN
Sbjct: 219 -GCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSG--------------FELDATAYN 263
Query: 346 AVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRR 404
++ + C+ + + + +K++ + G+ TY + ++ +S D+V + + R
Sbjct: 264 IMIRSLCIAGRGDLALEF-YKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR 322
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
E+ E + L+++F GK+ EA+E IRE++ + + A + L LC R D
Sbjct: 323 ICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD 382
Query: 465 A--IPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCS-PNIGTINT 521
A I ++ K R+L + + +G ++ + ++ FE +K P + T
Sbjct: 383 ALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQ----FEVIKKSGRPPRVSTYTE 438
Query: 522 MLKVYGQNDKFSKAKFLFEEV 542
+++ + +F K LF E+
Sbjct: 439 IMQHLFKLKQFEKGCNLFNEM 459
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 110/241 (45%), Gaps = 37/241 (15%)
Query: 295 YHSIAVTLGQAGLLKELLNIVECMKQ--KPKTFKFKYSKNWDPIIEPDIVIYNAVLNACV 352
Y ++ + GQA + + E M Q P++ V +NA+LNAC+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRS----------------AVSFNALLNACL 148
Query: 353 PSKQWKGVSWVFKQLKK--SGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
SK + V +F ++ + + + P+ +YG+ ++ SG + E+ Q++ G
Sbjct: 149 HSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVT 208
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV- 469
+ + ++ + +K+G+++ A EM K+G EL Y R A E
Sbjct: 209 TIAFTTILSSLYKKGELEVADNLWNEMVKKGC--------ELDNA-AYNVRIMSAQKESP 259
Query: 470 EKIRRLPRA------RPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIGTINTM 522
E+++ L +P +++ ++ + + G +D+ ++E ++ ++C+PN T T+
Sbjct: 260 ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTL 319
Query: 523 L 523
+
Sbjct: 320 I 320
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 134/310 (43%), Gaps = 32/310 (10%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y KL+ +LGK ++P++A ++F M N + Y ++ ++G ++E
Sbjct: 152 IYVKLIVMLGKCKQPEKAHELFQEMI-NEGCVVNHEVYTALVSAYSRSGRFDAAFTLLER 210
Query: 318 MKQ----KP---------KTF--KFKYSKNWDPI-------IEPDIVIYNAVLNACVPSK 355
MK +P K+F F + K D + I P+ + YN +++A +K
Sbjct: 211 MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAK 270
Query: 356 QWKGV-SWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTY 414
+ + S + + L + KP+ T + +G +++ + + + SG P T+
Sbjct: 271 MFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTF 330
Query: 415 KVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR 474
+L+ ++ K G + + M+K T Y + +GR D + ++E + R
Sbjct: 331 NILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTY---NVVIDAFGRAGD-LKQMEYLFR 386
Query: 475 L---PRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQND 530
L R P VT ++++ D + +++ ++ N ++ YG+ +
Sbjct: 387 LMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRME 446
Query: 531 KFSKAKFLFE 540
KF++ K + E
Sbjct: 447 KFAEMKGVLE 456
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 51/274 (18%)
Query: 269 ARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFK-F 327
A R + A+Q+F L+R + P++ Y + V LG+ KQ K + F
Sbjct: 127 ALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKC-------------KQPEKAHELF 173
Query: 328 KYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKS-GLKPNGATYGLAMEVT 386
+ N ++ ++ Y A+++A S ++ + +++K S +P+ TY + ++
Sbjct: 174 QEMINEGCVVNHEV--YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSF 231
Query: 387 MQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTA 446
+Q +D V +L +RR G P +TY L+ + G A
Sbjct: 232 LQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY----------------------GKA 269
Query: 447 SVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFE 506
++ E+ L D P+ + RA F G + M +++C F+
Sbjct: 270 KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRA------FGGNGQIEM----MENCYEKFQ 319
Query: 507 CMKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
PNI T N +L YG++ + K + E
Sbjct: 320 --SSGIEPNIRTFNILLDSYGKSGNYKKMSAVME 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 21/238 (8%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
Y L+ GKA+ E M G D PD +S G G ++ + N E
Sbjct: 257 ITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYE 316
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
KF+ S IEP+I +N +L++ S +K +S V + ++K
Sbjct: 317 ---------KFQSSG-----IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY + ++ ++G+ + LF ++ P +T LVR + + K D+ +R
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 422
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRA---RPLEVTFTGMIKS 491
+E I V++ C + YGR + E++ + L +P ++T+ M+K+
Sbjct: 423 IENSD-IRLDLVFFN--CLVDAYGRMEK-FAEMKGVLELMEKKGFKPDKITYRTMVKA 476
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 25/270 (9%)
Query: 248 KDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGL 307
K R S VY L++ KA R ++A + + M I PD+ Y+ + +
Sbjct: 212 KSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM-SKIGCEPDLVTYNVLLNYYYDNNM 270
Query: 308 LKELLNIV---------------------ECMKQKP-KTFKFKYSKNWDPIIEPDIVIYN 345
LK ++ C P K + F K +P D+V Y+
Sbjct: 271 LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMV-KEMEPRGFCDVVSYS 329
Query: 346 AVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRS 405
++ + + +F+++++ G+ N TY ++ ++ GN + +L Q+
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 406 GEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA 465
G P+ + Y ++ K G VD+A +M + + A Y L LC GR +A
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA 449
Query: 466 IPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
I E ++ P E+TF +I + G
Sbjct: 450 IKLFEDMKG-KECCPDELTFKFIIGGLIRG 478
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 109/271 (40%), Gaps = 22/271 (8%)
Query: 294 AYHSIAVTLGQAGLLKELLNIVECMKQKP-KTFKFKYSK-----------------NWD- 334
AY S L ++G++ + + + M+ + F F Y++ WD
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 335 -PIIEPDI-VIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
P+ I Y+ ++ K++ + + ++ G P+ + + +++ +
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
+ F + + G P+ ++Y +L+ ++ GKV +AVE M + GV L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDH 511
LC+ + A V + + R + V + +I G I+ + M K
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 512 CSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
C P++ T N +L Y N+ +A+ + E+
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 110/294 (37%), Gaps = 52/294 (17%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
V T L+ L K R AL++ M+ + P++ Y S+ L ++G L + +
Sbjct: 50 VDTILIDTLCKNRLVVPALEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHE 108
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M K I P+++ ++A+++A + V V+K + + + PN
Sbjct: 109 MDSKK--------------INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 154
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
TY + D ++ + G P +TY L F+K +VD+ ++ + +M
Sbjct: 155 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGH 497
+RGV V+ +IK G
Sbjct: 215 PQRGVAANT------------------------------------VSCNTLIKGYFQAGK 238
Query: 498 IDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVATSDFN 550
ID +F M + PNI + N +L N + KA FE ++ +D +
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLD 292
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
IE D V YN ++ A + + + + S +++++ SG+ + TY + V + D
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGV-IGTASVYYELACC 455
E+F RRSG + Y ++ + K GK+ EA+ EM+K+G+ GT S Y +
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS--YNMMVK 887
Query: 456 LCYYGRWQDAIPE-VEKIRRLPRARPLEVTFT 486
+C R + E ++ + R R L T
Sbjct: 888 ICATSRLHHEVDELLQAMERNGRCTDLSTYLT 919
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 92/214 (42%), Gaps = 5/214 (2%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P+ V Y++V++ V + W+ +++ ++ G+ P+ T + + ++ NY L
Sbjct: 326 PEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSL 385
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
F + R+ + + +++R + K G +A E E+ ++ Y ++
Sbjct: 386 FADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLN 445
Query: 459 YGRWQDAIPEVE--KIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCSPNI 516
G A+ +E K R +P +R + M++ ++D F + P+
Sbjct: 446 SGNVVKALDVIEMMKTRDIPLSR---FAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDA 502
Query: 517 GTINTMLKVYGQNDKFSKAKFLFEEVKVATSDFN 550
+ N ML +Y + + KAK +++ V F+
Sbjct: 503 SSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFD 536
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
+D + D+V + +++A V S + VF+++ SG+KP+ + + G
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL 360
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
D + I +G E L+ + K G +D + +M +R V+ +S+ L
Sbjct: 361 DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINAL 420
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-- 510
+ +G DA+ ++++ P EVTF G++ G +++ IF M D
Sbjct: 421 S----MHGEASDALSLFARMKQ-ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 511 HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVATS 547
+ +P + M+ ++G+ + +A + E + VA++
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASN 512
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 164/394 (41%), Gaps = 38/394 (9%)
Query: 167 YNESYGLLKRTQKRS----EVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLL 222
+ +GL++ +K + E E+ L+ R + + K ++ M GL E
Sbjct: 147 FGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFG 206
Query: 223 RILEMLGLRGCWKQALSVVQWVYNYKDHR-KYQSRFVY-TKLLAVLGKARRPKEALQIFN 280
+L+ L G K+A V ++D R K+ Y T LL + + EA ++
Sbjct: 207 CLLDALCKNGSVKEASKV------FEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 281 LMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPD 340
M+ + PD+ + ++ AG + + +++ M+++ EP+
Sbjct: 261 QMK-EAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG--------------FEPN 305
Query: 341 IVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
+ Y ++ A C K+ VF ++++ G + + TY + + G D + +
Sbjct: 306 VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVL 365
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
+R+ G +P +TY ++ K+ + +E +E I +M++RG +Y + C
Sbjct: 366 DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL 425
Query: 460 GRWQDAI---PEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH---CS 513
G ++A+ E+E P TF MI G + + F+ M +
Sbjct: 426 GEVKEAVRLWNEMEANGLSPGVD----TFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Query: 514 PNIGTINTMLKVYGQNDKFSKAKFLFEEVKVATS 547
P GT+ ++L ++DK AK ++ + TS
Sbjct: 482 PQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTS 515
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 21/261 (8%)
Query: 231 RGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYP 290
RG ++ SV+Q + + H + Y LL L E +I N+M P
Sbjct: 292 RGNLEEVASVIQHILS---HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY-QTSYCP 347
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIV-ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
+ Y+ + L +A LL ++ + ++QK PDIV YN VL
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQK---------------CLPDIVTYNTVLG 392
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
A + LK + P TY ++ + G EL+ Q+ +G P
Sbjct: 393 AMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFP 452
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+ +T + L+ F + V+EA + ++E RG S Y + LC + AI EV
Sbjct: 453 DDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI-EV 511
Query: 470 EKIRRLPRARPLEVTFTGMIK 490
+I +P E +T ++K
Sbjct: 512 VEIMLTGGCKPDETIYTAIVK 532
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 23/268 (8%)
Query: 260 TKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMK 319
+ L+ L + + +A+ I +M + V PD Y+ I L + G ++ L ++E M
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGV-PDTITYNMIIGNLCKKGHIRTALVLLEDM- 200
Query: 320 QKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATY 379
S + P PD++ YN V+ + +K ++G P TY
Sbjct: 201 ----------SLSGSP---PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY 247
Query: 380 GLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEK 439
+ +E+ + E+ + G P+ +TY LV + G ++E I+ +
Sbjct: 248 TVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILS 307
Query: 440 RGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTF----TGMIKSSMDG 495
G+ Y L LC + W D + E+ I P +T+ G+ K+ +
Sbjct: 308 HGLELNTVTYNTLLHSLCSHEYW-DEVEEILNIMYQTSYCPTVITYNILINGLCKARLLS 366
Query: 496 GHIDDCACIFECMKDHCSPNIGTINTML 523
ID ++ ++ C P+I T NT+L
Sbjct: 367 RAIDF---FYQMLEQKCLPDIVTYNTVL 391
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 106/254 (41%), Gaps = 51/254 (20%)
Query: 291 DMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA 350
D AAY++ A L + G + + E M + + P + ++
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRP--------------PSEKQFEILIRM 202
Query: 351 CVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPE 410
+++ V +V++++KK G KP Y M+ +++G +DL ++ + G V E
Sbjct: 203 HADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE 262
Query: 411 ALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVE 470
+ T+ +LV+ K G+++E +E ++ M + LC
Sbjct: 263 STTFMILVKGLCKAGRIEEMLEILQRMREN---------------LC------------- 294
Query: 471 KIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNIGTINTMLKVYGQN 529
+P +T MIK+ + G++D +++ M +D P++ T++ ++
Sbjct: 295 --------KPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKD 346
Query: 530 DKFSKAKFLFEEVK 543
+ + LF E+K
Sbjct: 347 GRVERGYELFMEMK 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 30/260 (11%)
Query: 204 KLSRLMKLSGLPFTEGQLLRILEM-----LGLRGCWKQALSVVQWVYNYKDHRKYQSR-F 257
+L LM G P +E Q ++ M GLR V +VY ++ R F
Sbjct: 179 QLPELMDSQGRPPSEKQFEILIRMHADNRRGLR---------VYYVYEKMKKFGFKPRVF 229
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
+Y +++ L K AL ++ + + + + + + L +AG ++E+L I++
Sbjct: 230 LYNRIMDALVKNGYFDLALAVYEDFKED-GLVEESTTFMILVKGLCKAGRIEEMLEILQR 288
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M++ + +PD+ Y A++ V V+ ++++ +KP+
Sbjct: 289 MREN--------------LCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
YG + + G + +ELF +++ + + Y+VL+ F +GKV A ++
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 438 EKRGVIGTASVYYELACCLC 457
G I +Y + LC
Sbjct: 395 VDSGYIADIGIYNAVIKGLC 414
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 286 IDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYN 345
++++ +M+ + T+ L++ L +C + FK S + PDI+ YN
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDC-DMAQEIFKEMVSDG----VPPDIMTYN 55
Query: 346 AVLNA-CVPSKQWKGV-------SW-VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+L+ C K K + W +F L G+KPN TY + + G + +
Sbjct: 56 ILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAY 115
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVY 449
LF +++ G +P++ TY L+R ++G + E I+EM G AS Y
Sbjct: 116 TLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
ELF ++ + G V +TY L++ ++ G D A E +EM GV Y L L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 457 CYYGRWQDAI--PEVEK------IRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM 508
C G+ + A+ +VE L +P VT+T MI G ++ +F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 509 K-DHCSPNIGTINTMLKVYGQN-DKFSKAKFLFE 540
K D P+ GT NT+++ + ++ DK + A+ + E
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 110/254 (43%), Gaps = 24/254 (9%)
Query: 283 RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIV 342
R + P++ A++ + L + GL+KE ++ M+ + ++PD
Sbjct: 225 RIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR---------------VKPDAN 269
Query: 343 IYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQI 402
+N + + K + +++ ++G KP TY A++ Q+G D +LF +
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329
Query: 403 RRSG---EVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
G P A T+ +++ K K +E E I M G + S Y ++ +C
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389
Query: 460 GRWQDAIPEVEKI--RRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECM-KDHCSPNI 516
+ +A ++++ + P P VT+ ++ + D+ ++ M + C+P++
Sbjct: 390 EKVDEAYKFLDEMSNKGYP---PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSV 446
Query: 517 GTINTMLKVYGQND 530
T N ++ ++ + D
Sbjct: 447 QTYNMLISMFFEMD 460
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P ++N V++AC + V K ++ GLKP+ TY + + + G D E+
Sbjct: 405 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
+ ++ + +TY L+R + K + DEA++ + EM++ GV A Y +L C
Sbjct: 465 LAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 524
Query: 459 YG-RWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
W+ A E++++ + L G+I++
Sbjct: 525 KALDWEKAEVLFEEMKQ--KGLHLNAISQGLIRA 556
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 117/292 (40%), Gaps = 19/292 (6%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
F YT L+ L + EA ++F M+ N ++P A Y+S+ + +++ L++
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMK-NERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M +EP+I+ ++ +++ + K ++ ++ G+ P+
Sbjct: 434 EMTASG--------------VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
TY ++ + N L+ + +G P T+ LV FWKEG++ A++ +E
Sbjct: 480 VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
++ + L LC G A +R P ++ M+K +
Sbjct: 540 NNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG-ITPDICSYVSMLKGHLQEK 598
Query: 497 HIDDCACIFEC--MKDHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVAT 546
I D + +C +K PN+ + + Y N A FL ++ T
Sbjct: 599 RITD-TMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKT 649
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 337 IEPDIVIYNA-VLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLV 395
I+P++ IY +L+ C +K + +F+ +KK G+ PN TY ++ ++GN
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEA-EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 396 HELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
+ L+ +I + +P + + LV F K ++ A M K GV VY L
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 456 LCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSP 514
C G +A+ + ++ L + P T+T +I + + +F+ MK+ P
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLS-PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 515 NIGTINTMLKVYGQNDKFSKAKFLFEEVKVA 545
+ T N+++ Y + +A L E+ +
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 30/304 (9%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYP--DMAAYHSIAVTLGQAGLLKELLNI 314
FV L+ V G++ F + R +D P D +++S+ + GL+ E +
Sbjct: 176 FVENTLVNVYGRS-------GYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 315 VECMKQKP-KTFKFKYS------------KNWDPIIEPDIVIYNAVLNACVPSKQWKGVS 361
+ M+++ +++ F S + +D + D+V +NA++ A + V
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 362 WVF-KQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRT 420
VF K L S KP+G T + G+ + I + G E LV
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 421 FWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARP 480
+ K GK+D+A+E R KR V S + + L +G +DA+ E+ +P
Sbjct: 349 YSKCGKIDKALEVFRATSKRDV----STWNSIISDLSVHGLGKDAL-EIFSEMVYEGFKP 403
Query: 481 LEVTFTGMIKSSMDGGHIDDCACIFECMKD--HCSPNIGTINTMLKVYGQNDKFSKAKFL 538
+TF G++ + G +D +FE M P I M+ + G+ K +A+ L
Sbjct: 404 NGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEEL 463
Query: 539 FEEV 542
E+
Sbjct: 464 VNEI 467
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 260 TKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMK 319
T L+ LG+ KEAL F M+ PD+ AY++I L + G K+ +++ M
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMK-EYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM- 226
Query: 320 QKPKTFKFKYSKNWDPIIEPDIVIYNAVLNA------------CVPSKQWKGVSWVFKQL 367
Q P F+Y PD Y ++++ + + W+ + +F+++
Sbjct: 227 QLPG---FRYP--------PDTYTYTILISSYCRYGMQTGCRKAIRRRMWEA-NRMFREM 274
Query: 368 KKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKV 427
G P+ TY ++ ++ ELF ++ G VP +TY +R + ++
Sbjct: 275 LFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEI 334
Query: 428 DEAVEAIREMEK--RGVIGTAS 447
+ A+E +R M+K GV G+++
Sbjct: 335 EGAIEMMRTMKKLGHGVPGSST 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 86/212 (40%), Gaps = 27/212 (12%)
Query: 293 AAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACV 352
A+ + LG+ G +KE L MK+ +PD+ YN ++NA
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYH--------------CKPDVYAYNTIINALC 211
Query: 353 PSKQWKGVSWVFKQLKKSGLK--PNGATYGLAME----VTMQSGNYDLV-------HELF 399
+K ++ Q++ G + P+ TY + + MQ+G + + +F
Sbjct: 212 RVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMF 271
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
++ G VP+ +TY L+ K ++ A+E +M+ +G + Y
Sbjct: 272 REMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVT 331
Query: 460 GRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
+ AI + +++L P T+T +I +
Sbjct: 332 NEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHA 363
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 115/285 (40%), Gaps = 31/285 (10%)
Query: 249 DHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAG 306
D + + FVY ++ + ++ +P L+ F LM D+ P +H + V +A
Sbjct: 71 DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKAC 130
Query: 307 LLKELLNIVECMKQKPKTFK-------------------FKYSKNWDPIIEPDIVIYNAV 347
+ + C K F K +D I +PD+V ++ +
Sbjct: 131 FFS-VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVL 189
Query: 348 LNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY---DLVHELFGQIRR 404
+N V VF+++ GL+P+ + A+ Q G +HE ++
Sbjct: 190 MNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK--KK 247
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
S + LV + K G ++ AVE +++ +R V A++ A YG +
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAA----YGYAKK 303
Query: 465 AIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK 509
A+ +E++ R +P V G++ + GG +++ + E M+
Sbjct: 304 AMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENME 348
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATY-----GLAMEVTMQSGNYD 393
PD+V + A++ A + Q K VF ++ SG+ PN TY GLA +
Sbjct: 230 PDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKK 289
Query: 394 LVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVI 443
+ E+ G +G P A TY + F +EGK + A E ++EM+ +G +
Sbjct: 290 YLLEMMG----NGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFV 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 261 KLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQ 320
K+ L K R EAL++F+ ++ + + PD+ A+ +I AG KE L +
Sbjct: 202 KMFDALSKDGRTHEALELFSQIK-DKNRMPDVVAHTAIVEAYANAGQAKETLKV------ 254
Query: 321 KPKTFKFKYSKNWDPIIEPDIVIYNAVLNA-CVPSKQWKGVSWVFKQLKKSGLKPNGATY 379
+ + + P+ Y+ ++ K K ++ +G+ PN ATY
Sbjct: 255 --------FMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATY 306
Query: 380 GLAMEVTMQSGNYDLVHELFGQIRRSGEVP------EALTYK 415
E ++ G + EL +++ G VP EAL YK
Sbjct: 307 TAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYK 348
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 85/193 (44%), Gaps = 4/193 (2%)
Query: 347 VLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSG 406
VL C + WV ++ + + + Y L + + G+ ++ L ++ G
Sbjct: 136 VLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVG 195
Query: 407 EVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDA- 465
P+ +TY ++ + GK+D+A +EM K + + Y + +C G + A
Sbjct: 196 LYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERAL 255
Query: 466 --IPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTM 522
+ E+EK P VT+T +I++ + +++ + + M + C PN T +
Sbjct: 256 ELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVL 315
Query: 523 LKVYGQNDKFSKA 535
++ +ND+ KA
Sbjct: 316 IQGVLENDEDVKA 328
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 331 KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG 390
K +D + E D+V++NA++ V +K+ + +F++++ S KP+ T + Q G
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 391 NYDL---VHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKR------G 441
D+ +H + S V + LV + K G + EA+ ++ R
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTS---LVDMYAKCGNISEALSVFHGIQTRNSLTYTA 460
Query: 442 VIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDC 501
+IG +++ + + + Y+ DA P E+TF G++ + GG I
Sbjct: 461 IIGGLALHGDASTAISYFNEMIDA-----------GIAPDEITFIGLLSACCHGGMIQTG 509
Query: 502 ACIFECMKD--HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
F MK + +P + + M+ + G+ +A L E +
Sbjct: 510 RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 112/265 (42%), Gaps = 22/265 (8%)
Query: 255 SRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNI 314
S Y ++ GKA +E + M + D PD+ +SI + G ++++
Sbjct: 249 STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKM--- 305
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
+ YS+ ++PDI +N ++ + + +K + V ++K
Sbjct: 306 -----------ESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSL 354
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
TY + +E ++G + + ++F +++ G P ++TY LV + K G V + +
Sbjct: 355 TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVL 414
Query: 435 REMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLP--RARPLEVTFTGMIKSS 492
R++ V+ + C + YG+ D E ++ + +P ++TF MIK+
Sbjct: 415 RQIVNSDVVLDTPFF---NCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
Query: 493 MDGGHIDDCACIFECMKDHCSPNIG 517
G D + E K S +IG
Sbjct: 472 TAHGIFD---AVQELEKQMISSDIG 493
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 345 NAVLNACVPSKQWKGVSW-VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIR 403
N +L+ V + + ++ +FK + G+ PN +Y L M+ + + + ++LFG++
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 404 RSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVI 443
VP+ +YK+L++ F ++G+V+ A+E + +M +G +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV 257
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 331 KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG 390
K +D +E D++++N +L A S +F ++ G+ PN T+ L + +++G
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 391 NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTA-SVY 449
D ++F Q++ SG +P +++ ++ + G +EA+ +R+M++ G+ A S+
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 450 YELACC 455
L+ C
Sbjct: 551 VALSAC 556
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 331 KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG 390
K +D + + ++ A+L+ +K+ + +F + ++ + PN +T+ + G
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 391 NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYY 450
D E+ G + G +A LV + G V++AV ++ K+ ++ S+
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400
Query: 451 ELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK- 509
A +GR + A ++ RL + P E+TFTG++ + G ++ +F M
Sbjct: 401 GCA----QHGRGKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 510 --DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
+H I M+ + G+ K +A+ L E + V
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV 492
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 7/178 (3%)
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVS---WVFKQLKKSGLK 373
CM +K + D PD V+Y ++ K W G + W F+ +KK G++
Sbjct: 294 CMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRG-FCEKGWLGSARKLW-FEMIKK-GMR 350
Query: 374 PNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
PN Y + + + G LV + ++ R+G L+ +++ F GK DEA E
Sbjct: 351 PNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEI 410
Query: 434 IREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
+ M + GV A Y L C + + + ++++ L +P + + ++++
Sbjct: 411 FKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALG-LKPSGMAYAALVRN 467
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 38/214 (17%)
Query: 367 LKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGK 426
++ GL P+ T +E+ ++ G + +F ++ G VP++ +YK++V +++GK
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 427 VDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFT 486
+ EA + M +RG I + + LC G AI K+ L +P + FT
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG-FKPNLINFT 291
Query: 487 GMIKSSMDGGHIDDCACIFECM-------------------------------------K 509
+I G I + E M
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 510 DHCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
D PN+ T +M+ Y + DK ++A+ LF +K
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 117/292 (40%), Gaps = 33/292 (11%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMR-----GNIDVYPDMAAYHSIAVTLGQAGLLKELL 312
YT ++ K + A +F+ M+ N++ Y + H A + G+A EL+
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA---YELM 416
Query: 313 NIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGL 372
N++ D P+I YNA +++ + + + GL
Sbjct: 417 NLM-----------------GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 373 KPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVE 432
+ +G TY + ++ + + + F ++ ++G + +L+ F ++ K+ E+
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 433 AIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR---LPRARPLEVTFTGMI 489
+ + G+I T Y + C C G A+ ++R +P + +G+
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Query: 490 KSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFE 540
K SM +D+ ++E M D SP T T+ Y + + + A L E
Sbjct: 580 KKSM----VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 23/270 (8%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAY----------------HSIAVTL 302
+T +++ + P EAL+IF+ MR +DV PD A SI ++
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMR-KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 303 GQAGLLKELLNIVECMKQKPKTFKFKYSKN-WDPIIEPDIVIYNAVLNACVPSKQWKGVS 361
+ GL E ++ K + +K +D + P+++++NA+++ + +
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 308
Query: 362 WVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTF 421
+F ++ ++P+ + A+ Q G+ + ++ + RS + L+ F
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368
Query: 422 WKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPL 481
K G V+ A R V+ V+ + +GR ++AI + R P
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVV----VWSAMIVGYGLHGRAREAISLYRAMER-GGVHPN 423
Query: 482 EVTFTGMIKSSMDGGHIDDCACIFECMKDH 511
+VTF G++ + G + + F M DH
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMADH 453
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
+F+++K G++ +Y +V ++ G Y + F ++ G P TY +++ F+
Sbjct: 207 IFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFF 266
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKI---RRLPRAR 479
+++ A+ +M+ RG+ + + + C + + + E EK+ + +
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK----MDEAEKLFVEMKGNKIG 322
Query: 480 PLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFL 538
P V++T MIK + +DD IFE M+ PN T +T+L K +AK +
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 539 FEEV 542
+ +
Sbjct: 383 LKNM 386
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
++ L+ GKA +E+++IF M+ ++ V + +Y+S L K +L
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMK-DLGVERTIKSYNS---------LFKVILRRGRY 236
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
M K ++K +EP YN +L S + + F+ +K G+ P+ A
Sbjct: 237 MMAKRY-----FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDA 291
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
T+ + + D +LF +++ + P ++Y +++ + +VD+ + EM
Sbjct: 292 TFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM 351
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDA 465
G+ A+ Y L LC G+ +A
Sbjct: 352 RSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 18/225 (8%)
Query: 213 GLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRP 272
G+P+ E + ++E G G ++++ + Q + + R +S Y L V+ + R
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKS---YNSLFKVILRRGRY 236
Query: 273 KEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKN 332
A + FN M V P Y+ + + L+ L E MK +
Sbjct: 237 MMAKRYFNKMVSE-GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG---------- 285
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
I PD +N ++N K+ +F ++K + + P+ +Y ++ +
Sbjct: 286 ----ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
D +F ++R SG P A TY L+ GK+ EA ++ M
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Query: 364 FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWK 423
K +++ G++PN Y M + N DL +F ++ G P TY +L+ F+K
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEV 483
A + I +M +Y + LC G+ A ++ + + R
Sbjct: 532 NKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCT 591
Query: 484 TFTGMIKSSMDGGHIDDCACIFECMKDHC-SPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
++ +I + G D + M ++ SPN+ T +++ + ++++ A + E+
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 543 K 543
K
Sbjct: 652 K 652
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 239 SVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSI 298
S V+ ++ K + +T L+ K+ R AL++ + M+ ++++ D+ AY ++
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK-SMELKLDLPAYGAL 666
Query: 299 AVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWK 358
C K KT +S+ + + P++ +YN++++ +
Sbjct: 667 IDGF--------------CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 359 GVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLV 418
++K++ G+ + TY ++ ++ GN +L +L+ ++ G VP+ + + VLV
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Query: 419 RTFWKEGKVDEAVEAIREMEKRGVIGTASVY 449
K+G+ +A + + EM+K+ V +Y
Sbjct: 773 NGLSKKGQFLKASKMLEEMKKKDVTPNVLLY 803
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 101/262 (38%), Gaps = 61/262 (23%)
Query: 254 QSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAY----HSIAVTLGQAGLLK 309
S V+T + L KA P+ AL+IFN D + A+ + I + + G +
Sbjct: 414 SSVLVHTMIQGCL-KAESPEAALEIFN------DSFESWIAHGFMCNKIFLLFCKQGKVD 466
Query: 310 ELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKK 369
+ ++ M+QK IEP++V YN ++ A K +F ++ +
Sbjct: 467 AATSFLKMMEQKG--------------IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 370 SGLKPNGATYGLAME---------------VTMQSGNYDLVHELF----------GQIRR 404
GL+PN TY + ++ M + N++ ++ GQ +
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 405 SGEVPEAL-----------TYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELA 453
+ E+ + L +Y ++ F K G D AVE REM + G + L
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 454 CCLCYYGRWQDAIPEVEKIRRL 475
C R A+ +++ +
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSM 654
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 117/268 (43%), Gaps = 18/268 (6%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
+V+ LL L K K+A ++F MR V ++ + S+ + G + E ++
Sbjct: 219 YVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV--NLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
M + EPDIV Y +L+ + + + + +++ G +PN
Sbjct: 277 QMNEAG--------------FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
Y + ++ + + ++F ++ R + +TY LV F K GK+D+ + +
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGG 496
M K+G++ + Y + +++ + +EK+R++ P + +I+ + G
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQI-EYHPDIGIYNVVIRLACKLG 441
Query: 497 HIDDCACIFECMKDH-CSPNIGTINTML 523
+ + ++ M+++ SP + T M+
Sbjct: 442 EVKEAVRLWNEMEENGLSPGVDTFVIMI 469
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/386 (19%), Positives = 152/386 (39%), Gaps = 48/386 (12%)
Query: 172 GLLKRTQKRSEVEVIRFLVERLSDREITTKDWKLSRLMKLSGLPFTEGQLLRILEM---- 227
L+ K +E R + + D+ I + LS G P L++L+M
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG-PICLSLFLQMLQMGFRP 414
Query: 228 ------LGLRGCWKQALSVVQWV---YNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQI 278
L+ C L + V Y+D+ +V + L+ K + +AL +
Sbjct: 415 TEYTFSTALKSCCVTELQQLHSVIVRMGYEDND-----YVLSSLMRSYAKNQLMNDALLL 469
Query: 279 FNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIE 338
+ G V P + +A + G E + ++ ++Q
Sbjct: 470 LDWASGPTSVVP----LNIVAGIYSRRGQYHESVKLISTLEQ------------------ 507
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
PD V +N + AC S + V +FK + +S ++P+ T+ + + + + L +
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI 567
Query: 399 FGQIRRSG-EVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
G I ++ + VL+ + K G + ++ E ++ +I + L CL
Sbjct: 568 HGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLI----TWTALISCLG 623
Query: 458 YYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH-CSPNI 516
+G Q+A+ + ++ L +P V+F ++ + GG + + +F+ MKD+ P +
Sbjct: 624 IHGYGQEALEKFKETLSLG-FKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEM 682
Query: 517 GTINTMLKVYGQNDKFSKAKFLFEEV 542
+ + +N +A+ L E+
Sbjct: 683 DHYRCAVDLLARNGYLKEAEHLIREM 708
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 106/253 (41%), Gaps = 27/253 (10%)
Query: 288 VYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAV 347
+ PD ++S+A G ++ L+++ MK+K + P++V + A+
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG--------------VAPNVVSWTAI 367
Query: 348 LNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH---ELFGQIRR 404
+ C + ++ VF ++++ G+ PN AT +++ G L+H E+ G R
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL---GCLSLLHSGKEVHGFCLR 424
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQD 464
+ +A LV + K G + A+E ++ + + + A +GR ++
Sbjct: 425 KNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA----MFGRGEE 480
Query: 465 AIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHCS--PNIGTINTM 522
I + P +TFT ++ + G + + F+ M+ P I + M
Sbjct: 481 GIAAFSVMLE-AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCM 539
Query: 523 LKVYGQNDKFSKA 535
+ + G++ +A
Sbjct: 540 VDLLGRSGYLDEA 552
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 275 ALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKEL--LNIVECMKQKPKTFKFKYSKN 332
A ++N M + D PD+ Y TL + LLK LN+ ++ + N
Sbjct: 163 AFDVYNKMLRSDDSKPDLETY-----TLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSN 217
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
+ PD + N ++ A + VFK++ G +PN TY ++ + G
Sbjct: 218 G---VIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRV 274
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
+ +++ G VP Y VL+ + E ++DEAVE + +M + Y +
Sbjct: 275 GQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTV 334
Query: 453 ACCLCYYGRWQDAIPEVEK 471
LC GR +A+ VE+
Sbjct: 335 LTELCRGGRGSEALEMVEE 353
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
VY ++ +LGK+ R E + M+ + D + + S+ T +AG L++ +++
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKD-SVFASVIRTFSRAGRLEDAISLF-- 104
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG- 376
K+ NW + ++ +L V + + +F++ G + N
Sbjct: 105 -----KSLHEFNCVNWS-------LSFDTLLQEMVKESELEAACHIFRKYCY-GWEVNSR 151
Query: 377 -ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
L M+V Q DL ++F ++ G P+ +Y++L++ F EGK++EA +
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 436 EM----EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR 474
M ++G VY L LC G DAI + KI R
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 31/297 (10%)
Query: 262 LLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK 321
L+ VL + R A Q+F M YPD +Y + G L+E +++
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQ-GCYPDRDSYRILMKGFCLEGKLEEATHLL------ 210
Query: 322 PKTFKFKYSKNWDPIIE---PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
YS W + DIV+Y +L+A + + + ++ + GLK
Sbjct: 211 -------YSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRR-------SGEVPEALTYKVLVRTFWKEGKVDEAV 431
Y +++G+++ E +++R G +P +Y + ++EGK+ E
Sbjct: 264 YH-----HIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGE 318
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
E + M +G T +Y LC G+ ++A+ + K P + +IK
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 492 SMDGGHIDDCACIFECMKDH--CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVAT 546
D G + + M C N T T++ ++ +F +A + EE+ + +
Sbjct: 379 LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVEC 317
VY ++ +LGK+ R E + M+ + D + + S+ T +AG L++ +++
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKD-SVFASVIRTFSRAGRLEDAISLF-- 104
Query: 318 MKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG- 376
K+ NW + ++ +L V + + +F++ G + N
Sbjct: 105 -----KSLHEFNCVNWS-------LSFDTLLQEMVKESELEAACHIFRKYCY-GWEVNSR 151
Query: 377 -ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIR 435
L M+V Q DL ++F ++ G P+ +Y++L++ F EGK++EA +
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 436 EM----EKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRR 474
M ++G VY L LC G DAI + KI R
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 31/297 (10%)
Query: 262 LLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQK 321
L+ VL + R A Q+F M YPD +Y + G L+E +++
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQ-GCYPDRDSYRILMKGFCLEGKLEEATHLL------ 210
Query: 322 PKTFKFKYSKNWDPIIE---PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
YS W + DIV+Y +L+A + + + ++ + GLK
Sbjct: 211 -------YSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRR-------SGEVPEALTYKVLVRTFWKEGKVDEAV 431
Y +++G+++ E +++R G +P +Y + ++EGK+ E
Sbjct: 264 YH-----HIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGE 318
Query: 432 EAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKS 491
E + M +G T +Y LC G+ ++A+ + K P + +IK
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 492 SMDGGHIDDCACIFECMKDH--CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKVAT 546
D G + + M C N T T++ ++ +F +A + EE+ + +
Sbjct: 379 LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 237 ALSVVQWVYNYKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYH 296
AL V++W KD+ + Y K + + G+AR A+ +F+ + Y+
Sbjct: 85 ALQVLEWRRGQKDYCIPLTSEEYAKGIKIAGRARDINLAVYLFD--EAAKKRMQTASVYN 142
Query: 297 SIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQ 356
S+ GL +E ++ + +++ P +V YN +++
Sbjct: 143 SLMSVYMWNGLAEECQSLFKDFRRQTHC-------------APTVVTYNILVSVYGRLLM 189
Query: 357 WKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKV 416
K + F++L+K L PN TY + M + N+D + F +++R P+ TY++
Sbjct: 190 VKNMEAAFEELQKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQL 249
Query: 417 LVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLC 457
++R + G ++ E ++ + + + + + C C
Sbjct: 250 MLRGYANSGNLNRMEEMYEVIKDQVGVNSGPLVRAMICAYC 290
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 19/206 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLL----KELLNI 314
Y L+ L +AL +FN M + P+ + I L Q G++ K+LL
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMN-KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 315 VECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKP 374
+ S+ P+ DIVI ++++C + V+K++ + +
Sbjct: 253 I-----------LDSSQANAPL---DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPA 298
Query: 375 NGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAI 434
+ Y + + SGN + + + G P+ TY L+ KEGK DEA +
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
Query: 435 REMEKRGVIGTASVYYELACCLCYYG 460
M+ GV Y + LC +G
Sbjct: 359 GTMQNGGVAPDQISYKVIIQGLCIHG 384
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 257 FVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTL---GQAGLLKELLN 313
F Y L++ L K + EA + M+ N V PD +Y I L G E L
Sbjct: 336 FTYNTLISALCKEGKFDEACDLHGTMQ-NGGVAPDQISYKVIIQGLCIHGDVNRANEFLL 394
Query: 314 IVECMKQKPKTFKFK-----YSKNWDPI-------------IEPDIVIYNAVLNACVPSK 355
+ P+ + Y + D ++P++ NA+++ V
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Query: 356 QWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYK 415
+ WV +++ + + P+ TY L + G+ L +L+ ++ R G P+ +TY
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514
Query: 416 VLVRTFWKEGKVDEAVEAIREMEKRGV 442
LVR +G++ +A + ++ G+
Sbjct: 515 ELVRGLCWKGRLKKAESLLSRIQATGI 541
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 96/219 (43%), Gaps = 15/219 (6%)
Query: 277 QIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPI 336
Q++++M + ++P+ ++ + +E+ + +E M+++
Sbjct: 222 QVYSVM-CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEG-------------- 266
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
EPD+V YN ++++ + K +++K + + + P+ TY ++ + G H
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAH 326
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCL 456
+ F ++ G P+ ++Y L+ + KEG + ++ + + EM V+ +
Sbjct: 327 QTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Query: 457 CYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDG 495
GR A+ V ++RRL P EV ++ +G
Sbjct: 387 VREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEG 425
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
PD+ Y+++ + + G LKE + +K Y + + PD+V Y +++
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYL----------YKIMYRRR----VVPDLVTYTSLIK 314
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG----NYDLVHELFGQIRRS 405
+ + F ++ G+KP+ +Y + + G + L+HE+ G +
Sbjct: 315 GLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLG----N 370
Query: 406 GEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGR 461
VP+ T KV+V F +EG++ AV + E+ + V V L LC G+
Sbjct: 371 SVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGK 426
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 8/212 (3%)
Query: 332 NWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGN 391
NWDP V+++ ++ + + VF+++ SG + T + ++
Sbjct: 163 NWDP------VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDL 216
Query: 392 YDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYE 451
+ +++ + R G P T+ +L F + E + + +ME+ G Y
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 452 LACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH 511
L C GR ++A + KI R P VT+T +IK G + + F M D
Sbjct: 277 LVSSYCRRGRLKEAF-YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDR 335
Query: 512 -CSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
P+ + NT++ Y + ++K L E+
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 367
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 289 YPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVL 348
+ ++ +Y + L +AG ++E ++ MK++ + PD+ +YNA++
Sbjct: 394 FSELQSYSLMISFLCKAGRVRESYTALQEMKKEG--------------LAPDVSLYNALI 439
Query: 349 NACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEV 408
AC ++ + ++ ++ G K N TY + + + G + LF ++ G
Sbjct: 440 EACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIE 499
Query: 409 PEALTYKVLVRTFWKEGKVDEAVEAIRE-MEKRGVIGTASVYYELACCLCYYGRWQDA 465
P+ Y L+ KE K++ A+E R+ ME+ T V E LC G +A
Sbjct: 500 PDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEA 557
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
I P + YN+++ + + + V + ++LK + P+ TY + M + + V
Sbjct: 154 ITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVE 213
Query: 397 ELFGQIRRSGEV-PEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACC 455
+ ++ R G V P+ TY + + G +A +A++E+E + + Y L
Sbjct: 214 RVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFL--- 270
Query: 456 LCYYGRWQDAIPEVEKI---RRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDHC 512
+ YGR + EV +I RL + V + MI+ + + +F+ + +C
Sbjct: 271 ITLYGRL-GKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANC 329
Query: 513 SP-NIGTINTMLKVYGQNDKFSKAKFLFEEVKVATSDFNA 551
S +I +N ++ Y Q KA L E+ NA
Sbjct: 330 STYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA 369
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 39/194 (20%)
Query: 339 PDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHEL 398
P +N +LN V +K + + +F K G++ + + ++ +SGN + +L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 399 FGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCY 458
+ + P +T+ L+R F +GK +EA + + MEK
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE------------------ 266
Query: 459 YGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMK-DHCSPNIG 517
R P +TF +I G +++ + E MK C PN G
Sbjct: 267 ------------------RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPG 308
Query: 518 TINTMLKVYGQNDK 531
T +L YG DK
Sbjct: 309 TYQEVL--YGLLDK 320
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 12/213 (5%)
Query: 337 IEPDIVIYNAVLNAC----VPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
I+PD + +++ VP + V W F+++ G +P+ T ++ ++GN
Sbjct: 206 IKPDNATFTTIISCARQNGVPKR---AVEW-FEKMSSFGCEPDNVTMAAMIDAYGRAGNV 261
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
D+ L+ + R +A+T+ L+R + G D + EM+ GV +Y L
Sbjct: 262 DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRL 321
Query: 453 ACCLCYYGR-WQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKDH 511
+ R WQ I + I P T+ ++++ + DD I+ MK+
Sbjct: 322 IDSMGRAKRPWQAKIIYKDLITN--GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEK 379
Query: 512 -CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
S + NT+L + N +A +F+++K
Sbjct: 380 GLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 337 IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVH 396
+EPD+V Y VL + + + +F +L GL P+ TY + + + + +
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL 341
Query: 397 ELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTA-------SVY 449
++ + + G P +TY +L++ K G + A +EME GV + S Y
Sbjct: 342 KMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Query: 450 YELACCLCYYGRWQDA 465
E+ +C +G ++A
Sbjct: 402 IEVDEVVCAHGLLEEA 417
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 259 YTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECM 318
YT ++ L + R KE + + N M+ + V PD+ Y T+ G++ +
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCD-RVEPDLVCY-----TIVLQGVIAD-------- 299
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+ PK K + + + PD+ YN +N +G + + K G +PN T
Sbjct: 300 EDYPKADKL-FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA---IR 435
Y + ++ +++G+ L+ ++ +G + T+ +++ + +VDE V A +
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYI---EVDEVVCAHGLLE 415
Query: 436 EMEKRGVIGTASVYYELACCLCYYGRWQDAI 466
E V +S E+ LC G A+
Sbjct: 416 EAFNMNVFVKSSRIEEVISRLCEKGLMDQAV 446
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
+FK++K+ GL PN ++ + G +LFG +R G +PE + Y +V F
Sbjct: 121 IFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAI 466
K K+++A R+M+ G+ A Y L L DA+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAV 221
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 363 VFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFW 422
+FK++K+ GL PN ++ + G +LFG +R G +PE + Y +V F
Sbjct: 121 IFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 423 KEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAI 466
K K+++A R+M+ G+ A Y L L DA+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAV 221
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/251 (17%), Positives = 108/251 (43%), Gaps = 16/251 (6%)
Query: 290 PDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLN 349
P++ Y + T ++G L+ L MK+ + P++V + +++
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA--------------LSPNVVTFTCLID 206
Query: 350 ACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVP 409
+ + ++K++++ + N TY ++ + G E++ ++ P
Sbjct: 207 GYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 410 EALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEV 469
+L Y ++ F++ G D A++ + +M +G+ + Y + LC G+ ++A V
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 470 EKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIF-ECMKDHCSPNIGTINTMLKVYGQ 528
E + + P V FT M+ + G + ++ + ++ P++ ++TM+ +
Sbjct: 327 EDMEK-SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 529 NDKFSKAKFLF 539
N + +A F
Sbjct: 386 NGQLHEAIVYF 396
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 340 DIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELF 399
D V +N V++ACV + V Q++KS + P+ AT+ + + + L E+
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIH 532
Query: 400 GQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYY 459
+ R G E L+ + K G ++ + M +R V+ + Y Y
Sbjct: 533 CCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA-------Y 585
Query: 460 GRWQDAIPEVEKIRRLPRAR--PLEVTFTGMIKSSMDGGHIDDCACIFECMKDH--CSPN 515
G + + +E + ++ P V F +I + G +D+ FE MK H P
Sbjct: 586 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 645
Query: 516 IGTINTMLKVYGQNDKFSKAK 536
I ++ + ++ K SKA+
Sbjct: 646 IEHYACVVDLLSRSQKISKAE 666
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 22/230 (9%)
Query: 252 KYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQA--GLLK 309
K RF +L + P +FN + +YH LG A G L
Sbjct: 100 KLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKSGKLI 159
Query: 310 ELLNIVECMKQKPKTFKFKYSKNWD--PIIEPDIVIYNAVL----NACVPSKQWKGVSWV 363
+NI M S+N + P + +++ A+L N+ + + V +
Sbjct: 160 RAVNIFRHMVN---------SRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 210
Query: 364 FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWK 423
F+Q+ SG++P+ + L V ++ N EL +++ G VP +Y LV F
Sbjct: 211 FRQMVDSGIEPD--VFALNCLVKGRTIN---TRELLSEMKGKGFVPNGKSYNSLVNAFAL 265
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR 473
G++D+AV+ + EM + G + Y L C G++ +A +E +R
Sbjct: 266 SGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 315
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 21/189 (11%)
Query: 266 LGKARRPK--EALQIFNLMRG--NIDVYPDMAAYHSIAVTL---GQAGLLKELLNIVECM 318
LG A+ K A+ IF M N++ P M YH + L G + L
Sbjct: 150 LGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYM----- 204
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+T + + + D IEPD+ N C+ + + ++K G PNG +
Sbjct: 205 ----ETVRSLFRQMVDSGIEPDVFALN-----CLVKGRTINTRELLSEMKGKGFVPNGKS 255
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y + SG D + ++ +G V + ++Y+ LV ++GK DEA + +
Sbjct: 256 YNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 315
Query: 439 KRGVIGTAS 447
++ ++ S
Sbjct: 316 EKQLVDIDS 324
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 94/214 (43%), Gaps = 6/214 (2%)
Query: 333 WDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNY 392
+D + E +V +N+++ + + +F + G+ P+ T+ + +M G
Sbjct: 274 FDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCS 333
Query: 393 DLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTASVYYEL 452
L + + ++G V +A LV + K G + A +A ++EK+ I V L
Sbjct: 334 QLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGL 393
Query: 453 ACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFECMKD-- 510
A +G +A+ ++++ A P +T+ G++ + G +++ F M+D
Sbjct: 394 AS----HGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH 449
Query: 511 HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEVKV 544
P + M+ + + +F +A+ L + + V
Sbjct: 450 GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV 483
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLM--RGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIV 315
+ T L+ G AR +A Q+F+ + RG + PD AY+++ +L + G + + ++
Sbjct: 282 ILTTLIHGSGVARNKIKARQLFDEISKRG---LTPDCGAYNALMSSLMKCGDVSGAIKVM 338
Query: 316 ECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQ--WKGVSWVFKQLKKSGLK 373
+ M++K IEPD V ++++ + SK+ + GV ++++K+ L
Sbjct: 339 KEMEEKG--------------IEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLV 384
Query: 374 PNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEA 433
P T + M++ +G +L +L+ + G P ++L + ++A E
Sbjct: 385 PKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFEC 444
Query: 434 IREMEKRGVIGTASVYYELACCL 456
+ +RG + VY L L
Sbjct: 445 SWQTVERGRCVSEPVYRMLETSL 467
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 285 NIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIY 344
N+ P +Y+S+ L Q ++++L ++V +++ D + PD+ Y
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQE------------LDFV--PDVDTY 550
Query: 345 NAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRR 404
V+N + +++ GL+P A Y + + G E F ++
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 405 SGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEK 439
SG P+ + Y +++ T+ + G++DEA E + E+ K
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVK 645
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 22/230 (9%)
Query: 252 KYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQA--GLLK 309
K RF +L + P +FN + +YH LG A G L
Sbjct: 125 KLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKSGKLI 184
Query: 310 ELLNIVECMKQKPKTFKFKYSKNWD--PIIEPDIVIYNAVL----NACVPSKQWKGVSWV 363
+NI M S+N + P + +++ A+L N+ + + V +
Sbjct: 185 RAVNIFRHMVN---------SRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 235
Query: 364 FKQLKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWK 423
F+Q+ SG++P+ + L V ++ N EL +++ G VP +Y LV F
Sbjct: 236 FRQMVDSGIEPD--VFALNCLVKGRTIN---TRELLSEMKGKGFVPNGKSYNSLVNAFAL 290
Query: 424 EGKVDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIR 473
G++D+AV+ + EM + G + Y L C G++ +A +E +R
Sbjct: 291 SGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 340
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 21/189 (11%)
Query: 266 LGKARRPK--EALQIFNLMRG--NIDVYPDMAAYHSIAVTL---GQAGLLKELLNIVECM 318
LG A+ K A+ IF M N++ P M YH + L G + L
Sbjct: 175 LGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYM----- 229
Query: 319 KQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGAT 378
+T + + + D IEPD+ N C+ + + ++K G PNG +
Sbjct: 230 ----ETVRSLFRQMVDSGIEPDVFALN-----CLVKGRTINTRELLSEMKGKGFVPNGKS 280
Query: 379 YGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREME 438
Y + SG D + ++ +G V + ++Y+ LV ++GK DEA + +
Sbjct: 281 YNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 340
Query: 439 KRGVIGTAS 447
++ ++ S
Sbjct: 341 EKQLVDIDS 349
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 331 KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQSG 390
K +D + + D+V +N++L A K W F+++++ G++PN ++ + SG
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 391 NYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
D + +++ G VPEA Y +V + G ++ A+ I EM
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 124/298 (41%), Gaps = 24/298 (8%)
Query: 247 YKDHRKYQSRFVYTKLLAVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAG 306
++D + R Y L K R +EA ++ M+ + PD+ Y ++ G
Sbjct: 379 FRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR-GIVPDVINYTTLIDGYCLQG 437
Query: 307 LLKELLNIVECMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQ 366
+ + L++++ M + PD++ YN +++ + + V ++++
Sbjct: 438 KVVDALDLIDEMIGNG--------------MSPDLITYNVLVSGLARNGHEEEVLEIYER 483
Query: 367 LKKSGLKPNGATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGK 426
+K G KPN T + +E + + F + + + PE V+ + + G
Sbjct: 484 MKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ--KCPE--NKASFVKGYCEAGL 539
Query: 427 VDEAVEAIREMEKRGVIGTASVYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFT 486
+A +A +E SVY +L LC G + A ++K+ R P
Sbjct: 540 SKKAYKAFVRLEYP---LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY-RVEPGRSMCG 595
Query: 487 GMIKSSMDGGHIDDCACIFECMKDH-CSPNIGTINTMLKVYGQNDKFSKAKFLFEEVK 543
MI + ++ + +F+ M + P++ T M+ Y + ++ KA+ LFE++K
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMK 653
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 118/277 (42%), Gaps = 25/277 (9%)
Query: 273 KEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAG--LLKELLNIVECMKQKPKTFKFKYS 330
K A+QI + G HS+AV LG G + + C K +F+ +
Sbjct: 125 KAAVQIHDFTLGK--------ELHSVAVRLGFVGDEFCESGFITLYC-----KAGEFENA 171
Query: 331 -KNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGATYGLAMEVTMQS 389
K +D E + +NA++ + + +F +K+SGL+P+ T
Sbjct: 172 RKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGL 231
Query: 390 GNYDLVHELFGQI--RRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREMEKRGVIGTAS 447
G+ L +L + ++ E + + L+ + K G++D A EM +R V+ +S
Sbjct: 232 GDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSS 291
Query: 448 VYYELACCLCYYGRWQDAIPEVEKIRRLPRARPLEVTFTGMIKSSMDGGHIDDCACIFEC 507
+ A G +A+ ++R RP ++TF G++ + + GG +++ F
Sbjct: 292 MIVGYAA----NGNTLEALECFRQMREFG-VRPNKITFVGVLSACVHGGLVEEGKTYFAM 346
Query: 508 MKD--HCSPNIGTINTMLKVYGQNDKFSKAKFLFEEV 542
MK P + ++ + ++ + +AK + EE+
Sbjct: 347 MKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 10/209 (4%)
Query: 258 VYTKLLAVLGKARRPKEALQIFNLMRG-NIDVYPDMAAYHSIAVTLGQAGLLKELLNIVE 316
VY +L+ KEA++ + G N V AY+ + L + G E L + +
Sbjct: 275 VYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFD 334
Query: 317 CMKQKPKTFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNG 376
+K++ N + ++ +N ++N +++ VF+Q+ P+
Sbjct: 335 AVKKE---------HNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDT 385
Query: 377 ATYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIRE 436
++ M + +L+G++ P+ TY +L+ T +KEGK+DE +
Sbjct: 386 LSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKT 445
Query: 437 MEKRGVIGTASVYYELACCLCYYGRWQDA 465
M + + +VY L L G+ DA
Sbjct: 446 MVESNLRPNLAVYNRLQDQLIKAGKLDDA 474
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 205 LSRLMKLSGLPFTEGQLLRILEMLGLRGCWKQALSVVQWVYNY-KDHRKYQSRFVYTKLL 263
L R M+ L E LL +L L G +L + +W++ Y K H + V T L+
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLG----SLDLGKWIHKYAKKHSFCKYVKVNTALI 272
Query: 264 AVLGKARRPKEALQIFNLMRGNIDVYPDMAAYHSIAVTLGQAGLLKELLNIVECMKQKPK 323
+ K +A+ IF MR Y D A+ ++ V G ++ + + E M+
Sbjct: 273 DMFAKCGSLDDAVSIFEKMR-----YKDTQAWSAMIVAYANHGKAEKSMLMFERMR---- 323
Query: 324 TFKFKYSKNWDPIIEPDIVIYNAVLNACVPSKQWK-GVSWVFKQLKKSGLKPNGATYGLA 382
S+N ++PD + + +LNAC + + + G + + + K G+ P+ YG
Sbjct: 324 ------SEN----VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 373
Query: 383 MEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEA 430
+++ ++GN + +E ++ S P + +++L+ +D A
Sbjct: 374 VDLLSRAGNLEDAYEFIDKLPIS---PTPMLWRILLAACSSHNNLDLA 418
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 279 FNLMRGNIDVYPDMAAYHSIA---------VT-------LGQAGLLKELLNIVECMKQKP 322
FN M +DV P +Y + VT +G+AGL+ + +
Sbjct: 360 FNKMHEELDVMPSSTSYEKLVKYSCDSNEVVTALDVVEKMGEAGLMISADILHSLLHAID 419
Query: 323 KTFKFKYSKNWDPI-----IEPDIVIYNAVLNACVPSKQWKGVSWVFKQLKKSGLKPNGA 377
+ +F + I ++P+ + +++ C K ++G + LK L+PN +
Sbjct: 420 EVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSS 479
Query: 378 TYGLAMEVTMQSGNYDLVHELFGQIRRSGEVPEALTYKVLVRTFWKEGKVDEAVEAIREM 437
+ + + N + Q++ +G P+++T+ L+ +E + + E EM
Sbjct: 480 MFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQEDAITKYYE---EM 536
Query: 438 EKRGVIGTASVYYELACCLCYYGRWQDA 465
++ GV T +Y L G+++ A
Sbjct: 537 KQAGVQATKRIYMSLIDAYAASGKFEKA 564