Miyakogusa Predicted Gene
- Lj4g3v0744870.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0744870.2 CUFF.47972.2
(142 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67620.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 130 3e-31
AT5G62900.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 95 2e-20
AT5G50090.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 92 1e-19
AT5G50090.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 92 1e-19
AT1G10530.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 87 5e-18
AT1G60010.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 85 1e-17
>AT5G67620.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; LOCATED IN: microtubule; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G62900.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink). |
chr5:26964891-26965720 REVERSE LENGTH=182
Length = 182
Score = 130 bits (328), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 74/93 (79%), Gaps = 3/93 (3%)
Query: 1 MGNCQAAEAATVVIQHPG-NKIERIYWSLSANQVMNLNPGHYVALVLMSSENNNNNGTPL 59
MGNCQAAEAATV+I HP NK+ERIYWS++A+ +M NPGHYVA+V+ S N G PL
Sbjct: 1 MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTSPTMKNEKGLPL 60
Query: 60 NSKHLKLLRPEDTLLIGQVYRLISFEDVLKEFA 92
K LKLLRP+DTLLIG VYRL+SFE+VL EFA
Sbjct: 61 --KQLKLLRPDDTLLIGHVYRLVSFEEVLNEFA 91
>AT5G62900.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G50090.1);
Has 157 Blast hits to 157 proteins in 14 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 157; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:25248872-25249725 FORWARD
LENGTH=161
Length = 161
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
Query: 1 MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSSENNNNNGTPLN 60
MGNCQAAEAAT VIQ P K R Y +++A++V+ +PGH+VAL+L S+ +G L
Sbjct: 1 MGNCQAAEAATTVIQQPDGKSVRFYCTVNASEVIKSHPGHHVALLLSSA---VPHGGSLR 57
Query: 61 SKHLKLLRPEDTLLIGQVYRLISFEDVLK 89
+KLLRP D LL+G VYRLIS E+V+K
Sbjct: 58 VTRIKLLRPSDNLLLGHVYRLISSEEVMK 86
>AT5G50090.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; LOCATED IN: cellular_component
unknown; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria -
0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses -
0; Other Eukaryotes - 339 (source: NCBI BLink). |
chr5:20369961-20370878 FORWARD LENGTH=159
Length = 159
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 1 MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVL---MSSENNNNNGT 57
MGNCQA + A VVIQHP K E++ +SA+ VM +NPGH V+L++ S ++ +G
Sbjct: 1 MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGG 60
Query: 58 PLNSKHLKLLRPEDTLLIGQVYRLISFEDVLK 89
PL +KLLRP DTL++G VYRLI+ ++V+K
Sbjct: 61 PLRLTRIKLLRPTDTLVLGHVYRLITTKEVMK 92
>AT5G50090.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G62900.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink). | chr5:20369961-20370878 FORWARD LENGTH=153
Length = 153
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 1 MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVL---MSSENNNNNGT 57
MGNCQA + A VVIQHP K E++ +SA+ VM +NPGH V+L++ S ++ +G
Sbjct: 1 MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGG 60
Query: 58 PLNSKHLKLLRPEDTLLIGQVYRLISFEDVLK 89
PL +KLLRP DTL++G VYRLI+ ++V+K
Sbjct: 61 PLRLTRIKLLRPTDTLVLGHVYRLITTKEVMK 92
>AT1G10530.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G60010.1);
Has 143 Blast hits to 143 proteins in 14 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:3471805-3472526 REVERSE LENGTH=166
Length = 166
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 14/102 (13%)
Query: 1 MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSSENNNNNGTPLN 60
MGNCQA AA +V+QHPG I+R Y S+S +VM + PGHYV+L++ SE N P
Sbjct: 1 MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLIIPLSEEEEKN-IPAT 59
Query: 61 SK-------------HLKLLRPEDTLLIGQVYRLISFEDVLK 89
K ++LLRP + L++G YRLI+ ++V+K
Sbjct: 60 EKGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMK 101
>AT1G60010.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G10530.1);
Has 185 Blast hits to 185 proteins in 18 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 180; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink). | chr1:22095660-22096434 REVERSE
LENGTH=173
Length = 173
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 1 MGNCQAAEAATVVIQHPGNKIERIYWSLSANQVMNLNPGHYVALVLMSSENNNNNGTP-- 58
MGNCQA +AA +V+QHP KI+R Y +S +++M + PGHYV+L++ E N T
Sbjct: 1 MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTTTT 60
Query: 59 --------LNSKHLKLLRPEDTLLIGQVYRLISFEDVLK 89
+ +KLLRP + L++G YRLI+ ++V+K
Sbjct: 61 DDKSERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMK 99