Miyakogusa Predicted Gene
- Lj4g3v0696580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0696580.1 Non Chatacterized Hit- tr|I1K2H3|I1K2H3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52111
PE,75.47,0,coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.47961.1
(1066 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65770.3 | Symbols: LINC4 | little nuclei4 | chr5:26311587-26... 711 0.0
AT5G65770.1 | Symbols: LINC4 | little nuclei4 | chr5:26311587-26... 711 0.0
AT5G65780.2 | Symbols: ATBCAT-5 | branched-chain amino acid amin... 696 0.0
AT5G65770.2 | Symbols: LINC4 | little nuclei4 | chr5:26311587-26... 694 0.0
AT1G67230.1 | Symbols: LINC1 | little nuclei1 | chr1:25151561-25... 198 2e-50
AT1G13220.2 | Symbols: LINC2 | nuclear matrix constituent protei... 197 2e-50
AT1G68790.1 | Symbols: LINC3 | little nuclei3 | chr1:25834932-25... 171 3e-42
AT1G13220.1 | Symbols: LINC2 | nuclear matrix constituent protei... 127 5e-29
>AT5G65770.3 | Symbols: LINC4 | little nuclei4 |
chr5:26311587-26315610 FORWARD LENGTH=1010
Length = 1010
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/811 (48%), Positives = 565/811 (69%), Gaps = 9/811 (1%)
Query: 20 RVLKSPLSDEQIWKRLRDAGFDEVSIKQKDKAALVAYIAKLEAEIYDLQHHMGLLILERK 79
RVLKSPL++E +WKRL+DAGFDE SIK +DKAAL+AYIAKLE+E+YD QH+MGLL+LE+
Sbjct: 29 RVLKSPLTEEIMWKRLKDAGFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKN 88
Query: 80 ELASKYDEVKTLTDSSELLHKHNSAMNKSALTESRKREETLKKTIGVKDACIASLEKAMH 139
EL+S+Y+E+K D S+L H + SAL E++KREE+LKK +G+ CI+SLEK +H
Sbjct: 89 ELSSQYEEIKASVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLH 148
Query: 140 EMRTECAETKVAAESKFAEAHRLIGEAQEKFTDAEAKLRAAESLQAEATRYNNIAERKLH 199
EMR ECAETKV+A S +EAH +I +A +K DAEAK+RAAE+LQAEA RY+ IAERKL
Sbjct: 149 EMRAECAETKVSAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAEANRYHRIAERKLK 208
Query: 200 DVEAREDNLRRQMISFKSDCDEKDKEISLERQSLSERXXXXXXXXXXXXXXXXXXXXRED 259
+VE+RED+L R++ SFKS+C+ K+ E+ +ERQ+L+ER RED
Sbjct: 209 EVESREDDLTRRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQRED 268
Query: 260 HLFSKSQELNRLQKELEDMKVKIEKEHEAFHDEKTSLKLLEATLLQREEALNKLQMELNK 319
H+F++SQEL L+K L+ K E+E +AF D+K++L++ A +REEA+++ + L K
Sbjct: 269 HIFARSQELAELEKGLDTAKTTFEEERKAFEDKKSNLEIALALCAKREEAVSERESSLLK 328
Query: 320 KEKELVEFQVKLANRESDETQKVTADQEAILRARKHDLEVELQMKRKVVESEIETKRRTW 379
KE+EL+ + K+A++ES+ Q V A+QE ILR RK D+E EL+ K K VE EIE+KRR W
Sbjct: 329 KEQELLVAEEKIASKESELIQNVLANQEVILRKRKSDVEAELECKSKSVEVEIESKRRAW 388
Query: 380 ELKEVDLKQREDQIQEREHELEVLTRSLSEKEKDLVDQSSALQEKDQNLRAAEKEFELNR 439
EL+EVD+KQRED + E+EH+LEV +R+L+EKEKD+ ++S L EK++NL A E++
Sbjct: 389 ELREVDIKQREDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVATEEDINRKT 448
Query: 440 TILQKEKDDIEQAKQDLQMSMASLENKTRQVDHAKERLEEMKSETGDLSIFEVKLKEEID 499
T+L+ EK+ + + +LQ S+ SLE+K ++VD A ++LE +KSET +LS E+KLKEE+D
Sbjct: 449 TMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKEELD 508
Query: 500 LVRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIAKERKEVSTFIKNERD 559
+R+Q +I ++R+ S ++K+ERD
Sbjct: 509 DLRAQKLEMLAEADRLKVEKAKFEAEWEHIDVKREELRKEAEYITRQREAFSMYLKDERD 568
Query: 560 QLREEKESLRNQYTHDLGLLASEREKFMNKMAQEHAEWYGKMQQERADFLQDIEMQKQEL 619
++EE+++LRNQ+ +D+ L ERE+FMNKM +EH+EW K+Q+ERADFL IEMQK+EL
Sbjct: 569 NIKEERDALRNQHKNDVESLNREREEFMNKMVEEHSEWLSKIQRERADFLLGIEMQKREL 628
Query: 620 NNLIEKRREEVERYLKEREKTFEEEKNREFQNINALKEKAAQELEHVSFEMKRLETERTE 679
IE +REE+E ++REK FE+EK E + I +LKE A +ELEHV E+KRL+ ER E
Sbjct: 629 EYCIENKREELENSSRDREKAFEQEKKLEEERIQSLKEMAEKELEHVQVELKRLDAERLE 688
Query: 680 INLDRERRNREWAELTDCIKELEVQRDKLQKQRELLHADRIQIFAQTEELKKLEDLKIVS 739
I LDRERR REWAEL D ++EL+VQR+KL+ QR +L A+R +I + EELKKLE+LK+
Sbjct: 689 IKLDRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEELKKLENLKVAL 748
Query: 740 DDIAIAEMVRSDMESKQQIISARKNLKHQTLTQGGRLNSHKEID-VDNT-----PYVERS 793
DD+++A+M S++E + +SA LK + +++ L+ + V N+ +ER
Sbjct: 749 DDMSMAKMQLSNLERSWEKVSA---LKQKVVSRDDELDLQNGVSTVSNSEDGYNSSMERQ 805
Query: 794 SGLSPPSPVRFSWIKRCSELIFRNSPEKPLI 824
+GL+P S FSWIKRC+ LIF+ SPEK +
Sbjct: 806 NGLTPSSATPFSWIKRCTNLIFKTSPEKSTL 836
>AT5G65770.1 | Symbols: LINC4 | little nuclei4 |
chr5:26311587-26315610 FORWARD LENGTH=1010
Length = 1010
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/811 (48%), Positives = 565/811 (69%), Gaps = 9/811 (1%)
Query: 20 RVLKSPLSDEQIWKRLRDAGFDEVSIKQKDKAALVAYIAKLEAEIYDLQHHMGLLILERK 79
RVLKSPL++E +WKRL+DAGFDE SIK +DKAAL+AYIAKLE+E+YD QH+MGLL+LE+
Sbjct: 29 RVLKSPLTEEIMWKRLKDAGFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKN 88
Query: 80 ELASKYDEVKTLTDSSELLHKHNSAMNKSALTESRKREETLKKTIGVKDACIASLEKAMH 139
EL+S+Y+E+K D S+L H + SAL E++KREE+LKK +G+ CI+SLEK +H
Sbjct: 89 ELSSQYEEIKASVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLH 148
Query: 140 EMRTECAETKVAAESKFAEAHRLIGEAQEKFTDAEAKLRAAESLQAEATRYNNIAERKLH 199
EMR ECAETKV+A S +EAH +I +A +K DAEAK+RAAE+LQAEA RY+ IAERKL
Sbjct: 149 EMRAECAETKVSAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAEANRYHRIAERKLK 208
Query: 200 DVEAREDNLRRQMISFKSDCDEKDKEISLERQSLSERXXXXXXXXXXXXXXXXXXXXRED 259
+VE+RED+L R++ SFKS+C+ K+ E+ +ERQ+L+ER RED
Sbjct: 209 EVESREDDLTRRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQRED 268
Query: 260 HLFSKSQELNRLQKELEDMKVKIEKEHEAFHDEKTSLKLLEATLLQREEALNKLQMELNK 319
H+F++SQEL L+K L+ K E+E +AF D+K++L++ A +REEA+++ + L K
Sbjct: 269 HIFARSQELAELEKGLDTAKTTFEEERKAFEDKKSNLEIALALCAKREEAVSERESSLLK 328
Query: 320 KEKELVEFQVKLANRESDETQKVTADQEAILRARKHDLEVELQMKRKVVESEIETKRRTW 379
KE+EL+ + K+A++ES+ Q V A+QE ILR RK D+E EL+ K K VE EIE+KRR W
Sbjct: 329 KEQELLVAEEKIASKESELIQNVLANQEVILRKRKSDVEAELECKSKSVEVEIESKRRAW 388
Query: 380 ELKEVDLKQREDQIQEREHELEVLTRSLSEKEKDLVDQSSALQEKDQNLRAAEKEFELNR 439
EL+EVD+KQRED + E+EH+LEV +R+L+EKEKD+ ++S L EK++NL A E++
Sbjct: 389 ELREVDIKQREDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVATEEDINRKT 448
Query: 440 TILQKEKDDIEQAKQDLQMSMASLENKTRQVDHAKERLEEMKSETGDLSIFEVKLKEEID 499
T+L+ EK+ + + +LQ S+ SLE+K ++VD A ++LE +KSET +LS E+KLKEE+D
Sbjct: 449 TMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKEELD 508
Query: 500 LVRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIAKERKEVSTFIKNERD 559
+R+Q +I ++R+ S ++K+ERD
Sbjct: 509 DLRAQKLEMLAEADRLKVEKAKFEAEWEHIDVKREELRKEAEYITRQREAFSMYLKDERD 568
Query: 560 QLREEKESLRNQYTHDLGLLASEREKFMNKMAQEHAEWYGKMQQERADFLQDIEMQKQEL 619
++EE+++LRNQ+ +D+ L ERE+FMNKM +EH+EW K+Q+ERADFL IEMQK+EL
Sbjct: 569 NIKEERDALRNQHKNDVESLNREREEFMNKMVEEHSEWLSKIQRERADFLLGIEMQKREL 628
Query: 620 NNLIEKRREEVERYLKEREKTFEEEKNREFQNINALKEKAAQELEHVSFEMKRLETERTE 679
IE +REE+E ++REK FE+EK E + I +LKE A +ELEHV E+KRL+ ER E
Sbjct: 629 EYCIENKREELENSSRDREKAFEQEKKLEEERIQSLKEMAEKELEHVQVELKRLDAERLE 688
Query: 680 INLDRERRNREWAELTDCIKELEVQRDKLQKQRELLHADRIQIFAQTEELKKLEDLKIVS 739
I LDRERR REWAEL D ++EL+VQR+KL+ QR +L A+R +I + EELKKLE+LK+
Sbjct: 689 IKLDRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEELKKLENLKVAL 748
Query: 740 DDIAIAEMVRSDMESKQQIISARKNLKHQTLTQGGRLNSHKEID-VDNT-----PYVERS 793
DD+++A+M S++E + +SA LK + +++ L+ + V N+ +ER
Sbjct: 749 DDMSMAKMQLSNLERSWEKVSA---LKQKVVSRDDELDLQNGVSTVSNSEDGYNSSMERQ 805
Query: 794 SGLSPPSPVRFSWIKRCSELIFRNSPEKPLI 824
+GL+P S FSWIKRC+ LIF+ SPEK +
Sbjct: 806 NGLTPSSATPFSWIKRCTNLIFKTSPEKSTL 836
>AT5G65780.2 | Symbols: ATBCAT-5 | branched-chain amino acid
aminotransferase 5 / branched-chain amino acid
transaminase 5 (BCAT5) | chr5:26311587-26315610 FORWARD
LENGTH=1018
Length = 1018
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/819 (48%), Positives = 565/819 (68%), Gaps = 17/819 (2%)
Query: 20 RVLKSPLSDEQIWKRLRDAGFDEVSIKQKDKAALVAYIAKLEAEIYDLQHHMGLLILERK 79
RVLKSPL++E +WKRL+DAGFDE SIK +DKAAL+AYIAKLE+E+YD QH+MGLL+LE+
Sbjct: 29 RVLKSPLTEEIMWKRLKDAGFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKN 88
Query: 80 ELASKYDEVKTLTDSSELLHKHNSAMNKSALTESRKREETLKKTIGV-KDACI------- 131
EL+S+Y+E+K D S+L H + SAL E++KREE+LKK +G+ KD I
Sbjct: 89 ELSSQYEEIKASVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKDLFIDFVLFFF 148
Query: 132 ASLEKAMHEMRTECAETKVAAESKFAEAHRLIGEAQEKFTDAEAKLRAAESLQAEATRYN 191
+ LEK +HEMR ECAETKV+A S +EAH +I +A +K DAEAK+RAAE+LQAEA RY+
Sbjct: 149 SQLEKTLHEMRAECAETKVSAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAEANRYH 208
Query: 192 NIAERKLHDVEAREDNLRRQMISFKSDCDEKDKEISLERQSLSERXXXXXXXXXXXXXXX 251
IAERKL +VE+RED+L R++ SFKS+C+ K+ E+ +ERQ+L+ER
Sbjct: 209 RIAERKLKEVESREDDLTRRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQ 268
Query: 252 XXXXXREDHLFSKSQELNRLQKELEDMKVKIEKEHEAFHDEKTSLKLLEATLLQREEALN 311
REDH+F++SQEL L+K L+ K E+E +AF D+K++L++ A +REEA++
Sbjct: 269 VSLNQREDHIFARSQELAELEKGLDTAKTTFEEERKAFEDKKSNLEIALALCAKREEAVS 328
Query: 312 KLQMELNKKEKELVEFQVKLANRESDETQKVTADQEAILRARKHDLEVELQMKRKVVESE 371
+ + L KKE+EL+ + K+A++ES+ Q V A+QE ILR RK D+E EL+ K K VE E
Sbjct: 329 ERESSLLKKEQELLVAEEKIASKESELIQNVLANQEVILRKRKSDVEAELECKSKSVEVE 388
Query: 372 IETKRRTWELKEVDLKQREDQIQEREHELEVLTRSLSEKEKDLVDQSSALQEKDQNLRAA 431
IE+KRR WEL+EVD+KQRED + E+EH+LEV +R+L+EKEKD+ ++S L EK++NL A
Sbjct: 389 IESKRRAWELREVDIKQREDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVAT 448
Query: 432 EKEFELNRTILQKEKDDIEQAKQDLQMSMASLENKTRQVDHAKERLEEMKSETGDLSIFE 491
E++ T+L+ EK+ + + +LQ S+ SLE+K ++VD A ++LE +KSET +LS E
Sbjct: 449 EEDINRKTTMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLE 508
Query: 492 VKLKEEIDLVRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIAKERKEVS 551
+KLKEE+D +R+Q +I ++R+ S
Sbjct: 509 MKLKEELDDLRAQKLEMLAEADRLKVEKAKFEAEWEHIDVKREELRKEAEYITRQREAFS 568
Query: 552 TFIKNERDQLREEKESLRNQYTHDLGLLASEREKFMNKMAQEHAEWYGKMQQERADFLQD 611
++K+ERD ++EE+++LRNQ+ +D+ L ERE+FMNKM +EH+EW K+Q+ERADFL
Sbjct: 569 MYLKDERDNIKEERDALRNQHKNDVESLNREREEFMNKMVEEHSEWLSKIQRERADFLLG 628
Query: 612 IEMQKQELNNLIEKRREEVERYLKEREKTFEEEKNREFQNINALKEKAAQELEHVSFEMK 671
IEMQK+EL IE +REE+E ++REK FE+EK E + I +LKE A +ELEHV E+K
Sbjct: 629 IEMQKRELEYCIENKREELENSSRDREKAFEQEKKLEEERIQSLKEMAEKELEHVQVELK 688
Query: 672 RLETERTEINLDRERRNREWAELTDCIKELEVQRDKLQKQRELLHADRIQIFAQTEELKK 731
RL+ ER EI LDRERR REWAEL D ++EL+VQR+KL+ QR +L A+R +I + EELKK
Sbjct: 689 RLDAERLEIKLDRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEELKK 748
Query: 732 LEDLKIVSDDIAIAEMVRSDMESKQQIISARKNLKHQTLTQGGRLNSHKEID-VDNT--- 787
LE+LK+ DD+++A+M S++E + +SA LK + +++ L+ + V N+
Sbjct: 749 LENLKVALDDMSMAKMQLSNLERSWEKVSA---LKQKVVSRDDELDLQNGVSTVSNSEDG 805
Query: 788 --PYVERSSGLSPPSPVRFSWIKRCSELIFRNSPEKPLI 824
+ER +GL+P S FSWIKRC+ LIF+ SPEK +
Sbjct: 806 YNSSMERQNGLTPSSATPFSWIKRCTNLIFKTSPEKSTL 844
>AT5G65770.2 | Symbols: LINC4 | little nuclei4 |
chr5:26311587-26315544 FORWARD LENGTH=1042
Length = 1042
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/838 (47%), Positives = 565/838 (67%), Gaps = 36/838 (4%)
Query: 20 RVLKSPLSDEQIWKRLRDAGFDEVSIKQKDKAALVAYIAKLEAEIYDLQHHMGLLILERK 79
RVLKSPL++E +WKRL+DAGFDE SIK +DKAAL+AYIAKLE+E+YD QH+MGLL+LE+
Sbjct: 29 RVLKSPLTEEIMWKRLKDAGFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKN 88
Query: 80 ELASKYDEVKTLTDSSELLHKHNSAMNKSALTESRKREETLKKTIGVKDACIASLEKAMH 139
EL+S+Y+E+K D S+L H + SAL E++KREE+LKK +G+ CI+SLEK +H
Sbjct: 89 ELSSQYEEIKASVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLH 148
Query: 140 EMRTECAETKVAAESKFAEAHRLIGEAQEKFTDAEAKLRAAESLQAEATRYNNIAERKLH 199
EMR ECAETKV+A S +EAH +I +A +K DAEAK+RAAE+LQAEA RY+ IAERKL
Sbjct: 149 EMRAECAETKVSAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAEANRYHRIAERKLK 208
Query: 200 DVEAREDNLRRQMISFKSDCDEKDKEISLERQSLSERXXXXXXXXXXXXXXXXXXXXRED 259
+VE+RED+L R++ SFKS+C+ K+ E+ +ERQ+L+ER RED
Sbjct: 209 EVESREDDLTRRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQRED 268
Query: 260 HLFSKSQELNRLQKELEDMKVKIEKEHEAFHDEKTSLKLLEATLLQREE----------- 308
H+F++SQEL L+K L+ K E+E +AF D+K++L++ A +REE
Sbjct: 269 HIFARSQELAELEKGLDTAKTTFEEERKAFEDKKSNLEIALALCAKREEVCFYSHNSLLF 328
Query: 309 ----------------ALNKLQMELNKKEKELVEFQVKLANRESDETQKVTADQEAILRA 352
A+++ + L KKE+EL+ + K+A++ES+ Q V A+QE ILR
Sbjct: 329 LVLHYRSSKKFLGDKIAVSERESSLLKKEQELLVAEEKIASKESELIQNVLANQEVILRK 388
Query: 353 RKHDLEVELQMKRKVVESEIETKRRTWELKEVDLKQREDQIQEREHELEVLTRSLSEKEK 412
RK D+E EL+ K K VE EIE+KRR WEL+EVD+KQRED + E+EH+LEV +R+L+EKEK
Sbjct: 389 RKSDVEAELECKSKSVEVEIESKRRAWELREVDIKQREDLVGEKEHDLEVQSRALAEKEK 448
Query: 413 DLVDQSSALQEKDQNLRAAEKEFELNRTILQKEKDDIEQAKQDLQMSMASLENKTRQVDH 472
D+ ++S L EK++NL A E++ T+L+ EK+ + + +LQ S+ SLE+K ++VD
Sbjct: 449 DITEKSFNLDEKEKNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLEDKRKRVDS 508
Query: 473 AKERLEEMKSETGDLSIFEVKLKEEIDLVRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 532
A ++LE +KSET +LS E+KLKEE+D +R+Q
Sbjct: 509 ATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFEAEWEHIDVK 568
Query: 533 XXXXXXXXXFIAKERKEVSTFIKNERDQLREEKESLRNQYTHDLGLLASEREKFMNKMAQ 592
+I ++R+ S ++K+ERD ++EE+++LRNQ+ +D+ L ERE+FMNKM +
Sbjct: 569 REELRKEAEYITRQREAFSMYLKDERDNIKEERDALRNQHKNDVESLNREREEFMNKMVE 628
Query: 593 EHAEWYGKMQQERADFLQDIEMQKQELNNLIEKRREEVERYLKEREKTFEEEKNREFQNI 652
EH+EW K+Q+ERADFL IEMQK+EL IE +REE+E ++REK FE+EK E + I
Sbjct: 629 EHSEWLSKIQRERADFLLGIEMQKRELEYCIENKREELENSSRDREKAFEQEKKLEEERI 688
Query: 653 NALKEKAAQELEHVSFEMKRLETERTEINLDRERRNREWAELTDCIKELEVQRDKLQKQR 712
+LKE A +ELEHV E+KRL+ ER EI LDRERR REWAEL D ++EL+VQR+KL+ QR
Sbjct: 689 QSLKEMAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSVEELKVQREKLETQR 748
Query: 713 ELLHADRIQIFAQTEELKKLEDLKIVSDDIAIAEMVRSDMESKQQIISARKNLKHQTLTQ 772
+L A+R +I + EELKKLE+LK+ DD+++A+M S++E + +SA LK + +++
Sbjct: 749 HMLRAERDEIRHEIEELKKLENLKVALDDMSMAKMQLSNLERSWEKVSA---LKQKVVSR 805
Query: 773 GGRLNSHKEID-VDNT-----PYVERSSGLSPPSPVRFSWIKRCSELIFRNSPEKPLI 824
L+ + V N+ +ER +GL+P S FSWIKRC+ LIF+ SPEK +
Sbjct: 806 DDELDLQNGVSTVSNSEDGYNSSMERQNGLTPSSATPFSWIKRCTNLIFKTSPEKSTL 863
>AT1G67230.1 | Symbols: LINC1 | little nuclei1 |
chr1:25151561-25156032 REVERSE LENGTH=1132
Length = 1132
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 214/852 (25%), Positives = 406/852 (47%), Gaps = 39/852 (4%)
Query: 45 IKQKDKAALVAYIAKLEAEIYDLQHHMGLLILERKELASKYDEV-KTLTDSSELLHKHNS 103
I+ D L I++LE E+++ QH MGLL++E+KE +S+Y+ + + + +E L + +
Sbjct: 44 IQFDDPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEVNECLKQERN 103
Query: 104 AMNKSALTESRKREETLKKTIGVKDACIASLEKAMHEMRTECAETKVAAESKFAEAHRLI 163
A + A+ + KREE L+K +G++ C LEKA+ E+R E AE K A+SK EA+ L+
Sbjct: 104 A-HLIAIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSKLTEANALV 162
Query: 164 GEAQEKFTDAEAKLRAAESLQAEATRYNNIAERKLHDVEAREDNLRRQMISFKSDCDEKD 223
+EK + EAKLRA ++ AE +R ++ ERK +VEARE +L+R+ S+ ++ + +
Sbjct: 163 RSVEEKSLEVEAKLRAVDAKLAEVSRKSSDVERKAKEVEARESSLQRERFSYIAEREADE 222
Query: 224 KEISLERQSLSERXXXXXXXXXXXXXXXXXXXXREDHLFSKSQELNRLQKELEDMKVKIE 283
+S +R+ L E RED + + + KELE+ + KI+
Sbjct: 223 ATLSKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKID 282
Query: 284 KEHEAFHDEKTSLKLLEATLLQREEALNKLQMELNKKEKELVEFQVKLANRESDETQKVT 343
+ A + + L RE+ + L+ + K +EL Q KL RE Q++
Sbjct: 283 AANLAVKKLEDDVSSRIKDLALREQETDVLKKSIETKARELQALQEKLEAREKMAVQQLV 342
Query: 344 ADQEAILRARKHDLEVELQMKRKVVESEIETKRRTWELKEVDLKQREDQIQEREHELEVL 403
+ +A L + + + E+E++ KRK ++ +++K E +E + K E+++ +RE L+
Sbjct: 343 DEHQAKLDSTQREFELEMEQKRKSIDDSLKSKVAEVEKREAEWKHMEEKVAKREQALDRK 402
Query: 404 TRSLSEKEKDLVDQSSALQEKDQNLRAAEKEFELNRTILQKEKDDIEQAKQDLQMSMASL 463
EKE D + + +++ L++ EK E + L ++K+ I K ++
Sbjct: 403 LEKHKEKENDFDLRLKGISGREKALKSEEKALETEKKKLLEDKEIILNLKALVEKVSGEN 462
Query: 464 ENKTRQVDHAKERLEEMKSETGDLSIFEVKLKEEIDLVRSQXXXXXXXXXXXXXXXXXXX 523
+ + +++ K+ L + E + + +LKE+I+ RSQ
Sbjct: 463 QAQLSEINKEKDELRVTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFE 522
Query: 524 XXXXXXXXXXXXXXXXXXFIAKERKEVSTFIKNERDQLREEKESLRNQYTHDLGLLASER 583
I +++++ I E ++L++EK++ +L L +
Sbjct: 523 KEWEELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETLEVAK 582
Query: 584 EKFMNKMAQEHAEWYGKMQQERADFLQDIEMQKQELNNLIEKRREEVERYLKEREKTFEE 643
F M E + K + ER+ L DIEM+K++L + ++ EE ER L+ ++K FEE
Sbjct: 583 ASFAETMEYERSMLSKKAESERSQLLHDIEMRKRKLESDMQTILEEKERELQAKKKLFEE 642
Query: 644 EKNREFQNINALKEKAAQELEHVSFEMKRLETERTEINLDRERRNREWAELTDCIKELEV 703
E+ +E NIN L++ A +E+ + E +R+E E+ E++ + + E+ + +L
Sbjct: 643 EREKELSNINYLRDVARREMMDMQNERQRIEKEKLEVDSSKNHLEEQQTEIRKDVDDLVA 702
Query: 704 QRDKLQKQRELLHADRIQIFAQTEELKKLEDLKIVSDDIAIAEMVRSDMESKQQIISARK 763
KL++QRE ++R + + E + + ++ + E+ +M + ++ +
Sbjct: 703 LTKKLKEQREQFISERSRFLSSMESNRNCSRCGELLSELVLPEIDNLEMPNMSKLANI-- 760
Query: 764 NLKHQTLTQGGRLNSHKEIDVDNTPYVERSSGLS-PPSPVRFSWIKRCSELIFRNSPEKP 822
L ++ Q R D +P ++GL P + + SW ++C+ + + SP K
Sbjct: 761 -LDNEAPRQEMR---------DISPT---AAGLGLPVTGGKVSWFRKCTSKMLKLSPIKM 807
Query: 823 LIRKEDSPIVSDTGNVSNGGKKHMENDNPLSSFSKGQQMGYSSGEPKVIVEVPSRGEDAI 882
P V T N+++ + E N G P V+ + +
Sbjct: 808 T-----EPSV--TWNLADQEPQSTEQAN--------------VGGPSTTVQAATTYSFDV 846
Query: 883 RTSEYESATKDV 894
+ +E E+ TK+V
Sbjct: 847 QKAESETGTKEV 858
>AT1G13220.2 | Symbols: LINC2 | nuclear matrix constituent
protein-related | chr1:4515699-4520071 FORWARD
LENGTH=1128
Length = 1128
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 206/799 (25%), Positives = 401/799 (50%), Gaps = 25/799 (3%)
Query: 32 WKRLRDAGF-DEVSIKQKDKAALVAYIAKLEAEIYDLQHHMGLLILERKELASKYDEV-K 89
W+R R+ G +E S+++KD+ AL+ I+ LE E+Y QH+MGLL++E KEL SK++++ +
Sbjct: 63 WRRFREVGLLNEASMEKKDQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQ 122
Query: 90 TLTDSSELLHKHNSAMNKSALTESRKREETLKKTIGVKDACIASLEKAMHEMRTECAETK 149
++ E+L + S+ + ALT +REE L+K +G++ C+ LEKA+ E++ E ++ +
Sbjct: 123 AFQEAQEILKREQSS-HLYALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIR 181
Query: 150 VAAESKFAEAHRLIGEAQEKFTDAEAKLRAAESLQAEATRYNNIAERKLHDVEAREDNLR 209
+++E+K EA+ L+ + +D E K+ +AES AEATR ++ + +L +VE RE L+
Sbjct: 182 LSSEAKLVEANALVASVNGRSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQ 241
Query: 210 RQMISFKSDCDEKDKEISLERQSLSERXXXXXXXXXXXXXXXXXXXXREDHL--FSKSQE 267
++ +SF + + + +R+ L+E RE+ + K +
Sbjct: 242 QERLSFTKERESYEGTFQKQREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLK 301
Query: 268 LNRLQKELEDMKVKIEKEHEAFHDEKTSLKLLEATLLQREEALNKLQMELNKKEKELVEF 327
L + E + KV + +E + +L E T +E+ + LQ+ L KE EL F
Sbjct: 302 LKEKELEEWNRKVDLSMSKSKETEEDITKRLEELTT--KEKEAHTLQITLLAKENELRAF 359
Query: 328 QVKLANRESDETQKVTADQEAILRARKHDLEVELQMKRKVVESEIETKRRTWELKEVDLK 387
+ KL RE E QK+ DQ+ +L ++ + E+E + RK ++ E++ K E ++V++
Sbjct: 360 EEKLIAREGTEIQKLIDDQKEVLGSKMLEFELECEEIRKSLDKELQRKIEELERQKVEID 419
Query: 388 QREDQIQEREHELEVLTRSLSEKEKDLVDQSSALQEKDQNLRAAEKEFELNRTILQKEKD 447
E+++++R + ++EKE DL + ++E+++ ++A EK L + L +K+
Sbjct: 420 HSEEKLEKRNQAMNKKFDRVNEKEMDLEAKLKTIKEREKIIQAEEKRLSLEKQQLLSDKE 479
Query: 448 DIEQAKQDLQMSMASLENKTRQVDHAKERLEEMKSETGDLSIFEVKLKEEIDLVRSQXXX 507
+E +Q+++ A + K ++ + LE K E + + +LK +I+ R
Sbjct: 480 SLEDLQQEIEKIRAEMTKKEEMIEEECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEF 539
Query: 508 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIAKERKEVSTFIKNERDQLREEKES 567
I++E+++ F E ++L++E+ +
Sbjct: 540 LSKEVENLKQEKERFEKEWEILDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEESA 599
Query: 568 LRNQYTHDLGLLASEREKFMNKMAQEHAEWYGKMQQERADFLQDIEMQKQELNNLIEKRR 627
LR Q +L + +RE F M E + K++ E++ + D+EM ++ L +++R+
Sbjct: 600 LRVQIMQELDDIRLQRESFEANMEHERSALQEKVKLEQSKVIDDLEMMRRNLEIELQERK 659
Query: 628 EEVERYLKEREKTFEEEKNREFQNINALKEKAAQELEHVSFEMKRLETERTEINLDRERR 687
E+ E+ L +R FE+++ E +IN K+ +E+E + + L+ E EI +++
Sbjct: 660 EQDEKDLLDRMAQFEDKRMAELSDINHQKQALNREMEEMMSKRSALQKESEEIAKHKDKL 719
Query: 688 NREWAELTDCIKELEVQRDKLQKQRELLHADRIQIFAQTEELKKLEDLKIVSDDIAIAEM 747
+ E+ + I EL L+K+RE+ +R + A ++LK + +D ++++
Sbjct: 720 KEQQVEMHNDISELSTLSINLKKRREVFGRERSRFLAFVQKLKDCGSCGQLVNDFVLSDL 779
Query: 748 VRSDMESKQQI-----ISARKNLKHQTLTQGGRLNSHKEIDVDNTPYVERSSGLSPPSPV 802
+ S ++ I +L + N K +D D + S G PS
Sbjct: 780 ---QLPSNDEVAILPPIGVLNDLPGSS-NASDSCNIKKSLDGDASG----SGGSRRPS-- 829
Query: 803 RFSWIKRCSELIFRNSPEK 821
S +++C+ +IF SP K
Sbjct: 830 -MSILQKCTSIIF--SPSK 845
>AT1G68790.1 | Symbols: LINC3 | little nuclei3 |
chr1:25834932-25839157 REVERSE LENGTH=1085
Length = 1085
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 185/735 (25%), Positives = 365/735 (49%), Gaps = 23/735 (3%)
Query: 20 RVLKSPLSDEQIWKRLRDAGF-DEVSIKQKDKAALVAYIAKLEAEIYDLQHHMGLLILER 78
RVL L ++ W++ ++ G DE S+++KD+ AL+ I KLE E++D QH+MGLL++E+
Sbjct: 32 RVL---LREDDDWQKFKEVGLLDEASLERKDRDALIEKILKLEKELFDYQHNMGLLLIEK 88
Query: 79 KELASKYDEVKTLTDSSELLHKHNSAMNKSALTESRKREETLKKTIGVKDACIASLEKAM 138
K+ S +E++ D + + K N L E+ KREE L+K + + +A LE +
Sbjct: 89 KQWTSTNNELQQAYDEAMEMLKREKTSNAITLNEADKREENLRKALIDEKQFVAELENDL 148
Query: 139 HEMRTECAETKVAAESKFAEAHRLIGEAQEKFTDAEAKLRAAESLQAEATRYNNIAERKL 198
+ E + K +E+K EA+ L+ +EK + + + AE + R ++ ERKL
Sbjct: 149 KYWQREHSVVKSTSEAKLEEANALVIGMKEKALEVDRERAIAEEKFSVMNRKSSELERKL 208
Query: 199 HDVEAREDNLRRQMISFKSDCDEKDKEISLERQSLSERXXXXXXXXXXXXXXXXXXXXRE 258
+VE RE +R+ +S ++ + + +R+ L E RE
Sbjct: 209 KEVETREKVHQREHLSLVTEREAHEAVFYKQREDLQEWEKKLTLEEDRLSEVKRSINHRE 268
Query: 259 DHLFSKSQELNRLQKELEDMKVKIEKEHEAFHDEKTSLKLLEATLLQREEALNKLQMELN 318
+ + + + + +K LE+++ KI +++ S+K+ + +E+ ++ +++
Sbjct: 269 ERVMENERTIEKKEKILENLQQKISVAKSELTEKEESIKIKLNDISLKEKDFEAMKAKVD 328
Query: 319 KKEKELVEFQVKLANRESDETQKVTADQEAILRARKHDLEVELQMKRKVVESEIETKRRT 378
KEKEL EF+ L RE E K+ DQ+A+L +R+ + E+EL+ R+ ++ E+E K+
Sbjct: 329 IKEKELHEFEENLIEREQMEIGKLLDDQKAVLDSRRREFEMELEQMRRSLDEELEGKKAE 388
Query: 379 WELKEVDLKQREDQIQEREHELEVLTRSLSEKEKDLVDQSSALQEKDQNLRAAEKEFELN 438
E +V++ +E+++ +RE LE + +KEKDL + ++EK++ L+A EK+ +
Sbjct: 389 IEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKALKAEEKKLHME 448
Query: 439 RTILQKEKDDIEQAKQDLQMSMASLENKTRQVDHAKERLEEMKSETGDLSIFEVKLKEEI 498
L ++K+ + + K +++ + ++ E L K E + + +LK++I
Sbjct: 449 NERLLEDKECLRKLKDEIEEIGTETTKQESRIREEHESLRITKEERVEFLRLQSELKQQI 508
Query: 499 DLVRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIAKERKEVSTFIKNER 558
D V+ + +A+E +++ +E+
Sbjct: 509 DKVKQEEELLLKEREELKQDKERFEKEWEALDKKRANITREQNEVAEENEKLRNLQISEK 568
Query: 559 DQLREEKESLRNQYTHDLGLLASEREKFMNKMAQEHAEWYGKMQQERADFLQDIEMQKQE 618
+L+ E+ + R+ +L + ++E F AD ++D+EMQK+
Sbjct: 569 HRLKREEMTSRDNLKRELDGVKMQKESF------------------EAD-MEDLEMQKRN 609
Query: 619 LNNLIEKRREEVERYLKEREKTFEEEKNREFQNINALKEKAAQELEHVSFEMKRLETERT 678
L+ +++ E ER ER +T+E+ E NIN K+ A +E+E + +E LE ER
Sbjct: 610 LDMEFQRQEEAGERDFNERARTYEKRSQEELDNINYTKKLAQREMEEMQYEKLALERERE 669
Query: 679 EINLDRERRNREWAELTDCIKELEVQRDKLQKQRELLHADRIQIFAQTEELKKLEDLKIV 738
+I++ ++ + AE+ I EL+V R L+++R+ +R + E+LK +
Sbjct: 670 QISVRKKLLKEQEAEMHKDITELDVLRSSLKEKRKEFICERERFLVFLEKLKSCSSCGEI 729
Query: 739 SDDIAIAEMVRSDME 753
+++ ++++ D+E
Sbjct: 730 TENFVLSDLRLPDVE 744
>AT1G13220.1 | Symbols: LINC2 | nuclear matrix constituent
protein-related | chr1:4515660-4517415 FORWARD
LENGTH=391
Length = 391
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 134/206 (65%), Gaps = 3/206 (1%)
Query: 32 WKRLRDAGF-DEVSIKQKDKAALVAYIAKLEAEIYDLQHHMGLLILERKELASKYDEV-K 89
W+R R+ G +E S+++KD+ AL+ I+ LE E+Y QH+MGLL++E KEL SK++++ +
Sbjct: 76 WRRFREVGLLNEASMEKKDQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQ 135
Query: 90 TLTDSSELLHKHNSAMNKSALTESRKREETLKKTIGVKDACIASLEKAMHEMRTECAETK 149
++ E+L + S+ + ALT +REE L+K +G++ C+ LEKA+ E++ E ++ +
Sbjct: 136 AFQEAQEILKREQSS-HLYALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIR 194
Query: 150 VAAESKFAEAHRLIGEAQEKFTDAEAKLRAAESLQAEATRYNNIAERKLHDVEAREDNLR 209
+++E+K EA+ L+ + +D E K+ +AES AEATR ++ + +L +VE RE L+
Sbjct: 195 LSSEAKLVEANALVASVNGRSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQ 254
Query: 210 RQMISFKSDCDEKDKEISLERQSLSE 235
++ +SF + + + +R+ L+E
Sbjct: 255 QERLSFTKERESYEGTFQKQREYLNE 280