Miyakogusa Predicted Gene

Lj4g3v0686440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0686440.1 tr|Q8H1P5|Q8H1P5_SOYBN Urease accessory protein
UreD OS=Glycine max PE=2 SV=1,86.64,0,UreD,Urease accessory protein
UreD,CUFF.47937.1
         (302 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35035.1 | Symbols: URED | urease accessory protein D | chr2:...   401   e-112
AT2G35035.2 | Symbols: URED | urease accessory protein D | chr2:...   269   2e-72

>AT2G35035.1 | Symbols: URED | urease accessory protein D |
           chr2:14763387-14765045 REVERSE LENGTH=294
          Length = 294

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 183/292 (62%), Positives = 232/292 (79%), Gaps = 3/292 (1%)

Query: 12  TGSVVVEKVGGRSSVTSCISRYPLKFIIPKKVGSSKTDAVWVYALNFGGGIVSGDNISCK 71
           TG VVVEKVGGRS+ TSC S+YPLKF++P K   + TD VW+Y++ +GGGIVSGD+ISC+
Sbjct: 3   TGKVVVEKVGGRSTATSCFSKYPLKFLLPSKAAPAGTDVVWIYSITYGGGIVSGDSISCE 62

Query: 72  FSVGDGCTMVLTTQGSTKVYKSVGSKCSHQILEATVGRNALLAIIPDPVTCFSTARYYQK 131
           F++GDGCT V+TTQ STKVYK++GSKCS QILEA +G  ALL +IPDPVTCFSTARYYQK
Sbjct: 63  FTIGDGCTAVITTQSSTKVYKAIGSKCSEQILEARIGSEALLVVIPDPVTCFSTARYYQK 122

Query: 132 QVFTVSSDSNLVIVDWITSGRHESGEKWDFDLYKSTNNIFLDDGQPLFLDTMLLEKEKIG 191
           Q+F + SDSNLV+VDWITSGRH +GEKWDF+ YKS NN++L+D  PLFLDT+LLEK  I 
Sbjct: 123 QIFRLLSDSNLVLVDWITSGRHANGEKWDFEFYKSINNVYLEDDHPLFLDTVLLEKRSIQ 182

Query: 192 CIKDHMQDYQVIAMIVLLGPNMQYIQNLVQGNVKRIMSEKLQNPSAALSHQRDKA--DHF 249
            I + MQDYQ IAM++L G  ++ IQ  VQ NVK +MSE+LQ   ++  H+ + +  + F
Sbjct: 183 SIAERMQDYQAIAMVILFGAKLKEIQKQVQENVKNMMSEQLQLSYSSRRHKSESSSRNRF 242

Query: 250 MTKPSFMASCSVFGPKKIGLLVRVASVTTESVYKFLQHQLAPLEPIIGVRPY 301
           M KP F+ASCS FGP+  G++VR+AS +TESVY FL+ QLA LEP++G  PY
Sbjct: 243 M-KPEFIASCSTFGPEGKGVVVRIASDSTESVYNFLRQQLAELEPVLGQAPY 293


>AT2G35035.2 | Symbols: URED | urease accessory protein D |
           chr2:14763260-14765045 REVERSE LENGTH=264
          Length = 264

 Score =  269 bits (688), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 137/285 (48%), Positives = 182/285 (63%), Gaps = 44/285 (15%)

Query: 12  TGSVVVEKVGGRSSVTSCISRYPLKFIIPKKVGSSKTDAVWVYALNFGGGIVSGDNISCK 71
           TG VVVEKVGGRS+ TSC S+YPLKF++P K   + TD VW+Y++ +GGGIVSGD+ISC+
Sbjct: 3   TGKVVVEKVGGRSTATSCFSKYPLKFLLPSKAAPAGTDVVWIYSITYGGGIVSGDSISCE 62

Query: 72  FSVGDGCTMVLTTQGSTKVYKSVGSKCSHQILEATVGRNALLAIIPDPVTCFSTARYYQK 131
           F++GDGCT V+TTQ STK            +L                       RY+ +
Sbjct: 63  FTIGDGCTAVITTQSSTK---------DQSVLN----------------------RYWNR 91

Query: 132 QVFTVSSDSNLVIVDWITSGRHESGEKWDFDLYKSTNNIFLDDGQPLFLDTMLLEKEKIG 191
           +   V           +  GRH +GEKWDF+ YKS NN++L+D  PLFLDT+LLEK  I 
Sbjct: 92  RESGVK----------LFCGRHANGEKWDFEFYKSINNVYLEDDHPLFLDTVLLEKRSIQ 141

Query: 192 CIKDHMQDYQVIAMIVLLGPNMQYIQNLVQGNVKRIMSEKLQNPSAALSHQRDKA--DHF 249
            I + MQDYQ IAM++L G  ++ IQ  VQ NVK +MSE+LQ   ++  H+ + +  + F
Sbjct: 142 SIAERMQDYQAIAMVILFGAKLKEIQKQVQENVKNMMSEQLQLSYSSRRHKSESSSRNRF 201

Query: 250 MTKPSFMASCSVFGPKKIGLLVRVASVTTESVYKFLQHQLAPLEP 294
           M KP F+ASCS FGP+  G++VR+AS +TESVY FL+ QLA LEP
Sbjct: 202 M-KPEFIASCSTFGPEGKGVVVRIASDSTESVYNFLRQQLAELEP 245