Miyakogusa Predicted Gene

Lj4g3v0684270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0684270.1 Non Chatacterized Hit- tr|B4G0B8|B4G0B8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,78.85,4e-16,seg,NULL,NODE_36032_length_743_cov_86.158813.path1.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14270.1 | Symbols:  | CAAX amino terminal protease family pr...   229   1e-60
AT1G14270.2 | Symbols:  | CAAX amino terminal protease family pr...   173   9e-44
AT1G14270.4 | Symbols:  | CAAX amino terminal protease family pr...   161   3e-40
AT1G14270.3 | Symbols:  | CAAX amino terminal protease family pr...   161   3e-40

>AT1G14270.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4877195 REVERSE LENGTH=353
          Length = 353

 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/217 (53%), Positives = 142/217 (65%)

Query: 32  FSSRHTNFRFPLTSKRSLPPLCFFNSQDKSNPKIPDKEPGLEWPILRRWEVPWEWQTVSL 91
           FS    + R    +++     C FNS  +   +   +    EWPIL+RWEVPW WQTVSL
Sbjct: 51  FSPGFASRRLFTVNRKKWRSACIFNSGKEPGGEGKLQGGSSEWPILQRWEVPWGWQTVSL 110

Query: 92  TSLACGLGFVLTGLVEATALPYLGIKPDVLSLDEKSEILFLDQGITTAVVLGIIYTVANT 151
           TS AC L FVLTGL E   +P+LGI  + L+LD+K+EILFLDQG+TTAVVL +I+TVA T
Sbjct: 111 TSFACALSFVLTGLTEMAVIPFLGIDVEKLTLDDKAEILFLDQGLTTAVVLAVIFTVAKT 170

Query: 152 FQPLPEDFFKYDLREPFNLQKXXXXXXXXXXXXXXXXXXXXXXXVSFFNGETPERETDAL 211
           F PLPED  +YDLR+P NLQK                       +S F  E PERE D+L
Sbjct: 171 FDPLPEDILRYDLRQPVNLQKGWLVWGGIGLVGAVGAIALTGVVLSVFRTEAPEREVDSL 230

Query: 212 VRLLPLIGSSNLSTACLVGIVGVLAPLLEETVFRGFF 248
           ++LLPLIGSSN+ST  LVGI G+LAPLLEETVFRGFF
Sbjct: 231 MKLLPLIGSSNISTLSLVGITGILAPLLEETVFRGFF 267


>AT1G14270.2 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876503 REVERSE LENGTH=247
          Length = 247

 Score =  173 bits (439), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 88/149 (59%), Positives = 105/149 (70%)

Query: 100 FVLTGLVEATALPYLGIKPDVLSLDEKSEILFLDQGITTAVVLGIIYTVANTFQPLPEDF 159
           FVLTGL E   +P+LGI  + L+LD+K+EILFLDQG+TTAVVL +I+TVA TF PLPED 
Sbjct: 13  FVLTGLTEMAVIPFLGIDVEKLTLDDKAEILFLDQGLTTAVVLAVIFTVAKTFDPLPEDI 72

Query: 160 FKYDLREPFNLQKXXXXXXXXXXXXXXXXXXXXXXXVSFFNGETPERETDALVRLLPLIG 219
            +YDLR+P NLQK                       +S F  E PERE D+L++LLPLIG
Sbjct: 73  LRYDLRQPVNLQKGWLVWGGIGLVGAVGAIALTGVVLSVFRTEAPEREVDSLMKLLPLIG 132

Query: 220 SSNLSTACLVGIVGVLAPLLEETVFRGFF 248
           SSN+ST  LVGI G+LAPLLEETVFRGFF
Sbjct: 133 SSNISTLSLVGITGILAPLLEETVFRGFF 161


>AT1G14270.4 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876443 REVERSE LENGTH=227
          Length = 227

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/140 (57%), Positives = 98/140 (70%)

Query: 109 TALPYLGIKPDVLSLDEKSEILFLDQGITTAVVLGIIYTVANTFQPLPEDFFKYDLREPF 168
             +P+LGI  + L+LD+K+EILFLDQG+TTAVVL +I+TVA TF PLPED  +YDLR+P 
Sbjct: 2   AVIPFLGIDVEKLTLDDKAEILFLDQGLTTAVVLAVIFTVAKTFDPLPEDILRYDLRQPV 61

Query: 169 NLQKXXXXXXXXXXXXXXXXXXXXXXXVSFFNGETPERETDALVRLLPLIGSSNLSTACL 228
           NLQK                       +S F  E PERE D+L++LLPLIGSSN+ST  L
Sbjct: 62  NLQKGWLVWGGIGLVGAVGAIALTGVVLSVFRTEAPEREVDSLMKLLPLIGSSNISTLSL 121

Query: 229 VGIVGVLAPLLEETVFRGFF 248
           VGI G+LAPLLEETVFRGFF
Sbjct: 122 VGITGILAPLLEETVFRGFF 141


>AT1G14270.3 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876443 REVERSE LENGTH=227
          Length = 227

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/140 (57%), Positives = 98/140 (70%)

Query: 109 TALPYLGIKPDVLSLDEKSEILFLDQGITTAVVLGIIYTVANTFQPLPEDFFKYDLREPF 168
             +P+LGI  + L+LD+K+EILFLDQG+TTAVVL +I+TVA TF PLPED  +YDLR+P 
Sbjct: 2   AVIPFLGIDVEKLTLDDKAEILFLDQGLTTAVVLAVIFTVAKTFDPLPEDILRYDLRQPV 61

Query: 169 NLQKXXXXXXXXXXXXXXXXXXXXXXXVSFFNGETPERETDALVRLLPLIGSSNLSTACL 228
           NLQK                       +S F  E PERE D+L++LLPLIGSSN+ST  L
Sbjct: 62  NLQKGWLVWGGIGLVGAVGAIALTGVVLSVFRTEAPEREVDSLMKLLPLIGSSNISTLSL 121

Query: 229 VGIVGVLAPLLEETVFRGFF 248
           VGI G+LAPLLEETVFRGFF
Sbjct: 122 VGITGILAPLLEETVFRGFF 141