Miyakogusa Predicted Gene
- Lj4g3v0684250.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0684250.2 Non Chatacterized Hit- tr|I1KMF9|I1KMF9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42310 PE,82.48,0,no
description,NULL; no description,Rubisco LS methyltransferase,
substrate-binding domain; seg,NULL,CUFF.47921.2
(486 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14030.1 | Symbols: | Rubisco methyltransferase family prote... 556 e-158
AT3G07670.1 | Symbols: | Rubisco methyltransferase family prote... 104 1e-22
AT3G55080.1 | Symbols: | SET domain-containing protein | chr3:2... 92 6e-19
AT3G55080.2 | Symbols: | SET domain-containing protein | chr3:2... 77 2e-14
AT4G20130.1 | Symbols: PTAC14 | plastid transcriptionally active... 74 2e-13
AT3G56570.1 | Symbols: | SET domain-containing protein | chr3:2... 58 1e-08
AT5G14260.2 | Symbols: | Rubisco methyltransferase family prote... 58 1e-08
AT5G14260.1 | Symbols: | Rubisco methyltransferase family prote... 58 1e-08
AT5G14260.3 | Symbols: | Rubisco methyltransferase family prote... 58 1e-08
AT2G18850.1 | Symbols: | SET domain-containing protein | chr2:8... 55 1e-07
AT2G18850.2 | Symbols: | SET domain-containing protein | chr2:8... 54 2e-07
AT1G01920.1 | Symbols: | SET domain-containing protein | chr1:3... 54 2e-07
AT1G01920.2 | Symbols: | SET domain-containing protein | chr1:3... 54 3e-07
AT1G24610.1 | Symbols: | Rubisco methyltransferase family prote... 52 1e-06
>AT1G14030.1 | Symbols: | Rubisco methyltransferase family protein
| chr1:4805493-4807440 REVERSE LENGTH=482
Length = 482
Score = 556 bits (1433), Expect = e-158, Method: Compositional matrix adjust.
Identities = 281/482 (58%), Positives = 355/482 (73%), Gaps = 8/482 (1%)
Query: 1 MASALSVGSGCAFPFHNNTSLSMAAKPSLL--QLKKPFASIGTETTPAVSPAVQTFWQWL 58
M+++++V SG F S+ + PS L + KK + ++ + V+ FW+WL
Sbjct: 1 MSASVAVVSG----FLRIPSIQKSQNPSFLFSRPKKSLVRPISASSSELPENVRNFWKWL 56
Query: 59 KEEGVISAKTPVKPGAVPEGLGLVAVKDISRNDVVLQVPKRLWINPDAVAASEIGNVCSG 118
+++GV+S K+ +P VPEGLGLVA +DI RN+VVL++PKRLWINP+ V AS+IG +C G
Sbjct: 57 RDQGVVSGKSVAEPAVVPEGLGLVARRDIGRNEVVLEIPKRLWINPETVTASKIGPLCGG 116
Query: 119 LKPWLAVALFLTRERTRDQSLWKHYFKILPQETDSTIYWSEEELSELQGTQLLKTTLAVK 178
LKPW++VALFL RE+ ++S W+ Y +LPQ TDST++WSEEEL+EL+GTQLL TTL VK
Sbjct: 117 LKPWVSVALFLIREKYEEESSWRVYLDMLPQSTDSTVFWSEEELAELKGTQLLSTTLGVK 176
Query: 179 EYVKSEFLRLEEEIILPNKKLFPSPITLDDFYWAFGILRSRAFSRLRNENLVVIPLADLI 238
EYV++EFL+LE+EI+LPNK LF S ITLDDF WAFGIL+SRAFSRLR +NLV+IPLADLI
Sbjct: 177 EYVENEFLKLEQEILLPNKDLFSSRITLDDFIWAFGILKSRAFSRLRGQNLVLIPLADLI 236
Query: 239 NHSARVTTEDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQVYIQYDLKKSNAELALDYG 298
NH+ + TED+AYE+KG AGLFS D LFSL+SP+ VKAGEQVYIQYDL KSNAELALDYG
Sbjct: 237 NHNPAIKTEDYAYEIKG-AGLFSRDLLFSLKSPVYVKAGEQVYIQYDLNKSNAELALDYG 295
Query: 299 FIEPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVSESFDIFYNRXXXXXXXXXXXX 358
F+E +RN+Y+LT+EI E+DPF+GDKLDIAESN + FDI +
Sbjct: 296 FVESNPKRNSYTLTIEIPESDPFFGDKLDIAESNKMGETGYFDIVDGQTLPAGMLQYLRL 355
Query: 359 XXXXXTDAFLLESIFRNSIWGHLELPVSRDNEELVCRVVREACNSALGGYHTTIEEDLK- 417
DAFLLESIF N+IWGHLELPVSR NEEL+CRVVR+AC SAL G+ TTIEED K
Sbjct: 356 VALGGPDAFLLESIFNNTIWGHLELPVSRTNEELICRVVRDACKSALSGFDTTIEEDEKL 415
Query: 418 LKETNIDSRLAIAVGIREGEKLLLQQIDEIFXXXXXXXXXXXXXXXRRLKDLGLCGESGD 477
L + ++ RL +A+ IR GEK +LQQID+IF RRLKDLGL GE GD
Sbjct: 416 LDKGKLEPRLEMALKIRIGEKRVLQQIDQIFKDRELELDILEYYQERRLKDLGLVGEQGD 475
Query: 478 VL 479
++
Sbjct: 476 II 477
>AT3G07670.1 | Symbols: | Rubisco methyltransferase family protein
| chr3:2451651-2454617 FORWARD LENGTH=504
Length = 504
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 146/298 (48%), Gaps = 24/298 (8%)
Query: 56 QWLKEEGVISAKTPVKPGAVPEGLGLVAVKDISRNDVVLQVPKRLWINPDAV-AASEIGN 114
WL + G+ K + + E GLVA +++ + + +L VP L I+ D+ +E G
Sbjct: 79 NWLSDSGLPPQKMAIDRVDIGER-GLVASQNLRKGEKLLFVPPSLVISADSEWTNAEAGE 137
Query: 115 VCS--GLKPWLAVALFLTRERT-RDQSLWKHYFKILPQETDSTIYWSEEELSE-LQGTQL 170
V + W +A +L E + + S W +Y LP++ S +YW+ EL L+ +Q+
Sbjct: 138 VMKRYDVPDWPLLATYLISEASLQKSSRWFNYISALPRQPYSLLYWTRTELDMYLEASQI 197
Query: 171 LKTTLAVKEYVKSEFLRLEEEIILPNKKLFPSPITLDD-FYWAFGILRSRAFSRLRNEN- 228
+ + V + L I + +LFP + D+ F W+FGIL SR RL + +
Sbjct: 198 RERAIERITNVVGTYEDLRSRIFSKHPQLFPKEVFNDETFKWSFGILFSR-LVRLPSMDG 256
Query: 229 -LVVIPLADLINHSARVTT-EDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQVYIQYDL 286
++P AD++NH+ V T D+ KG +F+ P + GEQV+I Y
Sbjct: 257 RFALVPWADMLNHNCEVETFLDYDKSSKGV--------VFTTDRP--YQPGEQVFISYG- 305
Query: 287 KKSNAELALDYGFI--EPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVSESFDI 342
KSN EL L YGF+ E T ++ L L + + D Y +KLD + +G S + F +
Sbjct: 306 NKSNGELLLSYGFVPREGTNPSDSVELALSLRKNDKCYEEKLDALKKHGLSTPQCFPV 363
>AT3G55080.1 | Symbols: | SET domain-containing protein |
chr3:20411476-20415830 REVERSE LENGTH=463
Length = 463
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 36/306 (11%)
Query: 53 TFWQWLKEEGVISAKTPVKPGAVPEGLGLVAVKDISRNDVVLQVPKRLWINPD------- 105
F WL+ + G G L A K I D +L+VP I PD
Sbjct: 45 NFLPWLERIAGAKITNTLSIGKSTYGRSLFASKVIYAGDCMLKVPFNAQITPDELPSDIR 104
Query: 106 AVAASEIGNVCSGLKPWLAVALFLTRERTRDQ-SLWKHYFKILPQ--ETDSTIYWSEEEL 162
+ ++E+GN+ G+ +A L RE+ Q S W Y LPQ E S+I+W E+EL
Sbjct: 105 VLLSNEVGNI--GM-----LAAVLIREKKMGQKSRWVPYISRLPQPAEMHSSIFWGEDEL 157
Query: 163 SELQGTQLLKTTLAVKEYVKSEFLRLEEEIILPNKKLFPSPITLDDFYWAFGILRSRAFS 222
S ++ + + + T+ K ++ +F + + + P L+DF +A+ ++ SRA+
Sbjct: 158 SMIRCSAVHQETVKQKAQIEKDFSFVAQAFKQHCPIVTERP-DLEDFMYAYALVGSRAWE 216
Query: 223 RLRNENLVVIPLADLINH---SARVTTEDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQ 279
++ + +IP AD +NH SA + D ++ ++ SP G++
Sbjct: 217 N--SKRISLIPFADFMNHDGLSASIVLRDEDNQLSEVTADRNY-------SP-----GDE 262
Query: 280 VYIQYDLKKSNAELALDYGFIEPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVSES 339
V+I+Y + SNA L LD+GF P + + +++ DP KL + +++ +
Sbjct: 263 VFIKYG-EFSNATLMLDFGFTFPYNIHDEVQIQMDVPNDDPLRNMKLGLLQTHHTRTVKD 321
Query: 340 FDIFYN 345
+IF++
Sbjct: 322 INIFHS 327
>AT3G55080.2 | Symbols: | SET domain-containing protein |
chr3:20411476-20414595 REVERSE LENGTH=353
Length = 353
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 125 VALFLTRERTRDQ-SLWKHYFKILPQ--ETDSTIYWSEEELSELQGTQLLKTTLAVKEYV 181
+A L RE+ Q S W Y LPQ E S+I+W E+ELS ++ + + + T+ K +
Sbjct: 2 LAAVLIREKKMGQKSRWVPYISRLPQPAEMHSSIFWGEDELSMIRCSAVHQETVKQKAQI 61
Query: 182 KSEFLRLEEEIILPNKKLFPSPITLDDFYWAFGILRSRAFSRLRNENLVVIPLADLINH- 240
+ +F + + + P L+DF +A+ ++ SRA+ ++ + +IP AD +NH
Sbjct: 62 EKDFSFVAQAFKQHCPIVTERP-DLEDFMYAYALVGSRAWEN--SKRISLIPFADFMNHD 118
Query: 241 --SARVTTEDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQVYIQYDLKKSNAELALDYG 298
SA + D ++ + L + + + G++V+I+Y + SNA L LD+G
Sbjct: 119 GLSASIVLRDEDNQLSEFSTL-------QVTADRNYSPGDEVFIKYG-EFSNATLMLDFG 170
Query: 299 FIEPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVSESFDIFYN 345
F P + + +++ DP KL + +++ + +IF++
Sbjct: 171 FTFPYNIHDEVQIQMDVPNDDPLRNMKLGLLQTHHTRTVKDINIFHS 217
>AT4G20130.1 | Symbols: PTAC14 | plastid transcriptionally active 14
| chr4:10878914-10881697 FORWARD LENGTH=483
Length = 483
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 159/404 (39%), Gaps = 67/404 (16%)
Query: 76 PEGLGLVAVKDIS---RNDVVLQVPKRLWIN----------PDAVA-ASEIGNVCSGLKP 121
P+G G+ A KDI R V++++P L I PD V I ++ + P
Sbjct: 99 PDGFGVYASKDIEPRRRARVIMEIPLELMITIRQKHPWMFFPDIVPIGHPIFDIINSTDP 158
Query: 122 ---W-LAVALFLTRERTRDQSLWKHYFKILP--QETDSTIYWSEEELSELQGTQLLKTTL 175
W + +A L RD W+ Y LP E S + +EE+L+ELQ L+ T
Sbjct: 159 EIDWDIRLACLLLFSFDRDDHFWRLYGDFLPAADECSSLLLATEEDLAELQDPDLVSTIR 218
Query: 176 AVKEYVKSEFLR-LEEEIILPNKKLFPSPITLDDFYWAFGILRSRAFSR------LRNEN 228
++ + + + + L K+L P + F WA + ++R S L E
Sbjct: 219 QQQKRILDFWEKNWHSGVPLKIKRLAEDP---ERFIWAVSMAQTRCISMQTRVGALVQEL 275
Query: 229 LVVIPLADLINHSARVTT------EDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQVYI 282
++IP AD++NHS +D EV AG +K GE++ I
Sbjct: 276 NMMIPYADMLNHSFEPNCFLHWRPKDRMLEVMSNAGQ-------------DIKKGEEMTI 322
Query: 283 QYDLKKSNAELALDYGFIEPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVSESFDI 342
Y + N L YGF P +A F GD I ++ SV F+I
Sbjct: 323 NYMPGQKNNMLMERYGFSTPVNPWDAIK----------FSGDS-RIHLNSFLSV---FNI 368
Query: 343 FYNRXXXXXXXXXXXXXXXXXTDAFLLESIFRNSIWGHLELPVSRDNEELVCRVVREACN 402
+ D ++ + W ++LP E + +++ C
Sbjct: 369 Y--GLPEEYYHDSELSRGDTFVDGAVIAAARTLPTWSDIDLPPIPSAERKAVKELQDECR 426
Query: 403 SALGGYHTTIEEDLKLKETNIDSR--LAIAVGIREGEKLLLQQI 444
L Y TT E+D KL ++ ++R A AV R K+ + +I
Sbjct: 427 KMLAEYPTTAEQDQKLLDSMSEARTTFATAVKYRMHRKMFIGKI 470
>AT3G56570.1 | Symbols: | SET domain-containing protein |
chr3:20958660-20961137 FORWARD LENGTH=531
Length = 531
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 51 VQTFWQWLKEEGVISAKTPVKPGAVPEGLGLVAVKDISRNDVVLQVPKRLWINPDAVAAS 110
++ F +W++ GV ++ +G+ + A D+ DVV + K + A
Sbjct: 6 LRAFKRWMQANGVDCSEALNLVDDENDGVSVRAFCDLKEGDVVANISKTACLTIKTSGAR 65
Query: 111 EIGNVCSGLKPWLAVALFLTRERT-RDQSLWKHYFKILPQETDSTIYWSEEEL-SELQGT 168
E+ + L L +++ L ER+ ++S W Y +ILP + D + WS E+L S L GT
Sbjct: 66 EMIE-SADLDGSLGLSVALMYERSLGEESPWAGYLQILPIQEDLPLVWSLEDLDSLLSGT 124
Query: 169 QLLKTTLAVKEYVKSEFLRLEE---EIILPNKKLFPSPITLDDF-----YWAFGILRSRA 220
+L K VK + + + E E ILP P + D F A ++ SR+
Sbjct: 125 ELHK-------LVKEDHVLIYEDWKENILPLTSSLPQNVDSDSFGIKEYLAAKSLIASRS 177
Query: 221 FSRLRNENLVVIPLADLINH 240
F ++PLADL NH
Sbjct: 178 FEIDDYHGSGMVPLADLFNH 197
>AT5G14260.2 | Symbols: | Rubisco methyltransferase family protein
| chr5:4601139-4603873 FORWARD LENGTH=514
Length = 514
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 154/389 (39%), Gaps = 48/389 (12%)
Query: 81 LVAVKDISRNDVVLQVPKRLWINPDAVAASE-IGNVCS--GLKPWLAVALFLTRERTR-D 136
+ A +D+ + DV VP L + + V +E I + + L +AL+L E+ +
Sbjct: 115 VAASEDLQKGDVAFSVPDSLVVTLERVLGNETIAELLTTNKLSELACLALYLMYEKKQGK 174
Query: 137 QSLWKHYFKILPQE-------TDSTIYWSEEELSELQGTQLLKTTLAVKEYVKSEFLRLE 189
+S+W Y + L ++ +S + WSE EL L G+ L E +K E+ L+
Sbjct: 175 KSVWYPYIRELDRQRGRGQLDAESPLLWSEAELDYLTGSPTKAEVLERAEGIKREYNELD 234
Query: 190 EEIILPNKKLFPSPITLDDFYWAFGILRSRAFSRLRN-----------ENLVVIPLADLI 238
+ P + ++F I + +AF +++ ++PL +
Sbjct: 235 TVWFMAGSLFQQYPFDIPTEAFSFEIFK-QAFVAIQSCVVHLQNVGLARRFALVPLGPPL 293
Query: 239 -----NHSARVTTEDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQVYIQYDLKKSNAEL 293
N A +T D A E D + P+ V G Q NA+L
Sbjct: 294 LAYCSNCKAMLTAVDGAVE-------LVVDRPYKAGDPIVVWCGPQ---------PNAKL 337
Query: 294 ALDYGFIEPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVSESFDIFYNRXXXXXXX 353
L+YGF++ + + ++ DP Y DK +A+ NG + F + +
Sbjct: 338 LLNYGFVDEDNPYDRVIVEAALNTEDPQYQDKRMVAQRNGKLSQQVFQVRVGKEREAVQD 397
Query: 354 XXXXXXXXXXTDAFLLESIFRNSIWGHLELPVSRDNEELVCRVVREACNSALGGYHTTI- 412
+D ++S+ S G + P+S E V + L GY TT
Sbjct: 398 MLPYLRLGYMSDPSEMQSVI--SSQGPV-CPMSPCMERAVLDQLANYFMRRLSGYPTTPK 454
Query: 413 EEDLKLKETNIDSRLAIAVGIREGEKLLL 441
E+D L + ++ R +A + + EK +L
Sbjct: 455 EDDALLADPSLSPRKRVATRLVQLEKKIL 483
>AT5G14260.1 | Symbols: | Rubisco methyltransferase family protein
| chr5:4601139-4603873 FORWARD LENGTH=514
Length = 514
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 154/389 (39%), Gaps = 48/389 (12%)
Query: 81 LVAVKDISRNDVVLQVPKRLWINPDAVAASE-IGNVCS--GLKPWLAVALFLTRERTR-D 136
+ A +D+ + DV VP L + + V +E I + + L +AL+L E+ +
Sbjct: 115 VAASEDLQKGDVAFSVPDSLVVTLERVLGNETIAELLTTNKLSELACLALYLMYEKKQGK 174
Query: 137 QSLWKHYFKILPQE-------TDSTIYWSEEELSELQGTQLLKTTLAVKEYVKSEFLRLE 189
+S+W Y + L ++ +S + WSE EL L G+ L E +K E+ L+
Sbjct: 175 KSVWYPYIRELDRQRGRGQLDAESPLLWSEAELDYLTGSPTKAEVLERAEGIKREYNELD 234
Query: 190 EEIILPNKKLFPSPITLDDFYWAFGILRSRAFSRLRN-----------ENLVVIPLADLI 238
+ P + ++F I + +AF +++ ++PL +
Sbjct: 235 TVWFMAGSLFQQYPFDIPTEAFSFEIFK-QAFVAIQSCVVHLQNVGLARRFALVPLGPPL 293
Query: 239 -----NHSARVTTEDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQVYIQYDLKKSNAEL 293
N A +T D A E D + P+ V G Q NA+L
Sbjct: 294 LAYCSNCKAMLTAVDGAVE-------LVVDRPYKAGDPIVVWCGPQ---------PNAKL 337
Query: 294 ALDYGFIEPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVSESFDIFYNRXXXXXXX 353
L+YGF++ + + ++ DP Y DK +A+ NG + F + +
Sbjct: 338 LLNYGFVDEDNPYDRVIVEAALNTEDPQYQDKRMVAQRNGKLSQQVFQVRVGKEREAVQD 397
Query: 354 XXXXXXXXXXTDAFLLESIFRNSIWGHLELPVSRDNEELVCRVVREACNSALGGYHTTI- 412
+D ++S+ S G + P+S E V + L GY TT
Sbjct: 398 MLPYLRLGYMSDPSEMQSVI--SSQGPV-CPMSPCMERAVLDQLANYFMRRLSGYPTTPK 454
Query: 413 EEDLKLKETNIDSRLAIAVGIREGEKLLL 441
E+D L + ++ R +A + + EK +L
Sbjct: 455 EDDALLADPSLSPRKRVATRLVQLEKKIL 483
>AT5G14260.3 | Symbols: | Rubisco methyltransferase family protein
| chr5:4601139-4603873 FORWARD LENGTH=514
Length = 514
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 154/389 (39%), Gaps = 48/389 (12%)
Query: 81 LVAVKDISRNDVVLQVPKRLWINPDAVAASE-IGNVCS--GLKPWLAVALFLTRERTR-D 136
+ A +D+ + DV VP L + + V +E I + + L +AL+L E+ +
Sbjct: 115 VAASEDLQKGDVAFSVPDSLVVTLERVLGNETIAELLTTNKLSELACLALYLMYEKKQGK 174
Query: 137 QSLWKHYFKILPQE-------TDSTIYWSEEELSELQGTQLLKTTLAVKEYVKSEFLRLE 189
+S+W Y + L ++ +S + WSE EL L G+ L E +K E+ L+
Sbjct: 175 KSVWYPYIRELDRQRGRGQLDAESPLLWSEAELDYLTGSPTKAEVLERAEGIKREYNELD 234
Query: 190 EEIILPNKKLFPSPITLDDFYWAFGILRSRAFSRLRN-----------ENLVVIPLADLI 238
+ P + ++F I + +AF +++ ++PL +
Sbjct: 235 TVWFMAGSLFQQYPFDIPTEAFSFEIFK-QAFVAIQSCVVHLQNVGLARRFALVPLGPPL 293
Query: 239 -----NHSARVTTEDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQVYIQYDLKKSNAEL 293
N A +T D A E D + P+ V G Q NA+L
Sbjct: 294 LAYCSNCKAMLTAVDGAVE-------LVVDRPYKAGDPIVVWCGPQ---------PNAKL 337
Query: 294 ALDYGFIEPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVSESFDIFYNRXXXXXXX 353
L+YGF++ + + ++ DP Y DK +A+ NG + F + +
Sbjct: 338 LLNYGFVDEDNPYDRVIVEAALNTEDPQYQDKRMVAQRNGKLSQQVFQVRVGKEREAVQD 397
Query: 354 XXXXXXXXXXTDAFLLESIFRNSIWGHLELPVSRDNEELVCRVVREACNSALGGYHTTI- 412
+D ++S+ S G + P+S E V + L GY TT
Sbjct: 398 MLPYLRLGYMSDPSEMQSVI--SSQGPV-CPMSPCMERAVLDQLANYFMRRLSGYPTTPK 454
Query: 413 EEDLKLKETNIDSRLAIAVGIREGEKLLL 441
E+D L + ++ R +A + + EK +L
Sbjct: 455 EDDALLADPSLSPRKRVATRLVQLEKKIL 483
>AT2G18850.1 | Symbols: | SET domain-containing protein |
chr2:8160788-8163479 FORWARD LENGTH=543
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 56 QWLKEEGVISAKTPVKPGAVP-EGLGLVAVKDISRNDVVLQVPKRLWINPDAVAASEIGN 114
+W ++ GV KT ++ + G G +A +D+ DV L++P I+ + V S++
Sbjct: 155 EWGQDNGV---KTKLQIAQIDGYGRGAIASEDLKFGDVALEIPVSSIISEEYVYNSDMYP 211
Query: 115 VC---SGLKPWLAVALFLTRERTRDQSLWKHYFKILPQETDSTIYWSEEELSELQGTQLL 171
+ G+ + L+ RE+ S +K YF L + + + + + + EL GT LL
Sbjct: 212 ILETFDGITSETMLLLWTMREKHNLDSKFKPYFDSLQENFCTGLSFGVDAIMELDGTLLL 271
Query: 172 KTTLAVKEYVKSEFLRLEEEIILPNKKLFPSPI-TLDDFYWAFGILRSRAFS-RLRNENL 229
+ KE ++ + L ++ ++++FP + T + + WA + S + + + L
Sbjct: 272 DEIMQAKELLRERYDEL-IPLLSNHREVFPPELYTWEHYLWACELYYSNSMQIKFPDGKL 330
Query: 230 --VVIPLADLINHSARVTTEDHAYEVK-GAAGLFSWDFLFSLRSPLSVKAGEQVYIQYDL 286
+IP+A +NHS + + VK G + + F + P + GEQ ++ Y
Sbjct: 331 KTCLIPVAGFLNHSI------YPHIVKYGKVDIETSSLKFPVSRPCN--KGEQCFLSYG- 381
Query: 287 KKSNAELALDYGFI 300
S++ L YGF+
Sbjct: 382 NYSSSHLLTFYGFL 395
>AT2G18850.2 | Symbols: | SET domain-containing protein |
chr2:8160788-8163479 FORWARD LENGTH=536
Length = 536
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 26/256 (10%)
Query: 56 QWLKEEGVISAKTPVKPGAVP-EGLGLVAVKDISRNDVVLQVPKRLWINPDAVAASEIGN 114
+W ++ GV KT ++ + G G +A +D+ DV L++P I+ + V S++
Sbjct: 155 EWGQDNGV---KTKLQIAQIDGYGRGAIASEDLKFGDVALEIPVSSIISEEYVYNSDMYP 211
Query: 115 VC---SGLKPWLAVALFLTRERTRDQSLWKHYFKILPQETDSTIYWSEEELSELQGTQLL 171
+ G+ + L+ RE+ S +K YF L + + + + + + EL GT LL
Sbjct: 212 ILETFDGITSETMLLLWTMREKHNLDSKFKPYFDSLQENFCTGLSFGVDAIMELDGTLLL 271
Query: 172 KTTLAVKEYVKSEFLRLEEEIIL--PNKKLFPSPI-TLDDFYWAFGILRSRAFS-RLRNE 227
+ KE ++ R +E I L ++++FP + T + + WA + S + + +
Sbjct: 272 DEIMQAKELLRE---RYDELIPLLSNHREVFPPELYTWEHYLWACELYYSNSMQIKFPDG 328
Query: 228 NL--VVIPLADLINHSARVTTEDHAYEVK-GAAGLFSWDFLFSLRSPLSVKAGEQVYIQY 284
L +IP+A +NHS + + VK G + + F + P GEQ ++ Y
Sbjct: 329 KLKTCLIPVAGFLNHSI------YPHIVKYGKVDIETSSLKFPVSRP--CNKGEQCFLSY 380
Query: 285 DLKKSNAELALDYGFI 300
S++ L YGF+
Sbjct: 381 G-NYSSSHLLTFYGFL 395
>AT1G01920.1 | Symbols: | SET domain-containing protein |
chr1:316204-319507 FORWARD LENGTH=572
Length = 572
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 19/187 (10%)
Query: 51 VQTFWQWLKEEGVISAKTPVKPGAVPEGLGLVAVKDISRND-VVLQVPKRLWINPDAVAA 109
++ F WL+ G +K +G G+ A +D V+L VP L I P V
Sbjct: 10 LERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDLAITPMRVLQ 69
Query: 110 SEI-GNVCSGL------KPWLAVALFLTRERTRDQSLWKHYFKILPQETDSTIYWSEEEL 162
+ G C + + LFLT ER R S WK Y +LP + +++S++++
Sbjct: 70 DPLLGPECQKMFEQGQVDDRFLMILFLTLERLRINSSWKPYLDMLPTRFGNPLWFSDDDI 129
Query: 163 SELQGTQLLKTTLAVKEYVKSEFLRLEEEI--ILPNKKLF-----PSPITLDDFYWAFGI 215
EL+GT L T E K + L L + +L K L S ++ + F WA +
Sbjct: 130 LELKGTNLYHAT----ELQKKKLLSLYHDKVEVLVTKLLILDGDSESKVSFEHFLWANSV 185
Query: 216 LRSRAFS 222
SRA +
Sbjct: 186 FWSRALN 192
>AT1G01920.2 | Symbols: | SET domain-containing protein |
chr1:316204-319507 FORWARD LENGTH=547
Length = 547
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 19/187 (10%)
Query: 51 VQTFWQWLKEEGVISAKTPVKPGAVPEGLGLVAVKDISRND-VVLQVPKRLWINPDAVAA 109
++ F WL+ G +K +G G+ A +D V+L VP L I P V
Sbjct: 10 LERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDLAITPMRVLQ 69
Query: 110 SEI-GNVCSGL------KPWLAVALFLTRERTRDQSLWKHYFKILPQETDSTIYWSEEEL 162
+ G C + + LFLT ER R S WK Y +LP + +++S++++
Sbjct: 70 DPLLGPECQKMFEQGQVDDRFLMILFLTLERLRINSSWKPYLDMLPTRFGNPLWFSDDDI 129
Query: 163 SELQGTQLLKTTLAVKEYVKSEFLRLEEEI--ILPNKKLF-----PSPITLDDFYWAFGI 215
EL+GT L T E K + L L + +L K L S ++ + F WA +
Sbjct: 130 LELKGTNLYHAT----ELQKKKLLSLYHDKVEVLVTKLLILDGDSESKVSFEHFLWANSV 185
Query: 216 LRSRAFS 222
SRA +
Sbjct: 186 FWSRALN 192
>AT1G24610.1 | Symbols: | Rubisco methyltransferase family protein
| chr1:8720906-8722711 REVERSE LENGTH=476
Length = 476
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 136/344 (39%), Gaps = 46/344 (13%)
Query: 18 NTSLSMAAKPSLLQLKKPFASIGTETTPAVSPAVQTFWQWLKEEGVISAKTPVKPGAVPE 77
N+ +++A SL +PF + ++P +W+K EG
Sbjct: 3 NSKMAIA---SLAAQIRPFTCLAASLPSRLAPHPPDLIRWIKREGGFVHHAVKLSQETQF 59
Query: 78 GLGLVAVKDISRNDVVL----QVPKRLWINPDAVAASEIGNVCSGLKP---W-LAVALFL 129
G+GL++ + IS ++ VP R + + ++S + + + P W + + L L
Sbjct: 60 GIGLISTEQISPGTDLISLPPHVPLRFESDDSSSSSSSLLSALARRVPEELWAMKLGLRL 119
Query: 130 TRERTRDQSLWKHYFKILPQETDSTIYWSEEELSELQGTQLLKTTLAVKEYV---KSEFL 186
+ER S W Y LP+ I++ E++ LQ LL ++ + E
Sbjct: 120 LQERANADSFWWPYISNLPETYTVPIFFPGEDIKNLQYAPLLHQVNKRCRFLLEFEQEIR 179
Query: 187 RLEEEIILPNKKLFPSPITLDDFYWAFGILRSRAFSRLRNENL---------VVIPLADL 237
R E++ + + W + +RAF N+ L +++PL D+
Sbjct: 180 RTLEDVKASDHPFSGQDVNASALGWTMSAVSTRAFRLHGNKKLQGGSSDDVPMMLPLIDM 239
Query: 238 INHS----ARVTTEDHAYEVKGAAGLFSWDFLFSLRSPLSVKAGEQVYIQYDLKKSNAEL 293
NHS AR+ E + + + L + + VK + + + Y SN
Sbjct: 240 CNHSFKPNARIIQEQNGADS---------NTLVKVVAETEVKENDPLLLNYGC-LSNDFF 289
Query: 294 ALDYGFIEPTTERNAYSLTLEISEADPFYGDKLDIAESNGFSVS 337
LDYGF+ E N Y T+E+ Y ++L A S VS
Sbjct: 290 LLDYGFV---IESNPYD-TIELK-----YDEQLMDAASMAAGVS 324