Miyakogusa Predicted Gene

Lj4g3v0684050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0684050.1 Non Chatacterized Hit- tr|K4BY03|K4BY03_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.92,2e-18,seg,NULL,CUFF.47954.1
         (328 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G11810.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   150   2e-36
AT2G03330.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   126   2e-29

>AT3G11810.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT2G03330.1); Has 141 Blast hits to 141 proteins
           in 21 species: Archae - 0; Bacteria - 9; Metazoa - 0;
           Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes -
           1 (source: NCBI BLink). | chr3:3727819-3728865 FORWARD
           LENGTH=348
          Length = 348

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/146 (52%), Positives = 101/146 (69%), Gaps = 8/146 (5%)

Query: 190 IYLRISWILAPVIAVVESSWGLEPLRRSAALMKGMKGVGAASFLFFSVAQGIVLWTGSLL 249
           + L ++WILA V+ VVES+WG+ PL+RS  L+KGMK    +   FF+  + I++W  +L 
Sbjct: 200 VKLYVNWILAWVVVVVESAWGITPLKRSKRLVKGMKCASLSIIFFFASTESILVWISTLA 259

Query: 250 TV------DSG--AWRDWAFVLQIVLASTVLMLLMLYSTAANTVLYMYCKAVHGELASEI 301
                   ++G  +W D  FV+QIV+ S  L LL LY+ AA TV+YMYCKAVHGEL  EI
Sbjct: 260 AYAQLNDNENGGKSWTDAFFVVQIVITSAFLTLLTLYNLAATTVMYMYCKAVHGELVWEI 319

Query: 302 AEEFAWQYVCLPFDDGKVPHVVSVLH 327
           AEEFA +YV LPFDDGKVPH+VSV +
Sbjct: 320 AEEFAREYVSLPFDDGKVPHLVSVAY 345



 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 34/37 (91%)

Query: 13 SLWSILSESKRIINAHSRHFLALSVVFLLPISFSLVI 49
          +LW ILSESKRIINAHSRHFLALSV+FLLP+ FS+ +
Sbjct: 14 NLWIILSESKRIINAHSRHFLALSVLFLLPLCFSITV 50


>AT2G03330.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G11810.1); Has 370 Blast hits to 370 proteins
           in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes -
           2 (source: NCBI BLink). | chr2:1008460-1014122 FORWARD
           LENGTH=385
          Length = 385

 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/144 (50%), Positives = 95/144 (65%), Gaps = 8/144 (5%)

Query: 190 IYLRISWILAPVIAVVESSWGLEPLRRSAALMKGMKGVGAASFLFFSVAQGIVLWTGSL- 248
           + L ++WILA V+ VVES+WG+ PL+ S  L+KGMK    +   FF+  + I++W  +L 
Sbjct: 237 VKLYVNWILAWVVVVVESAWGITPLKTSKRLVKGMKCASLSIIFFFASTESILVWISTLA 296

Query: 249 ----LTVDSGAWRDWA---FVLQIVLASTVLMLLMLYSTAANTVLYMYCKAVHGELASEI 301
               L  +    + W    F +Q  + S +L LLMLY+  A TV+YMYCKAVHGEL  EI
Sbjct: 297 AYALLNDNENGGKSWKGSFFFVQNWITSALLTLLMLYNLVATTVMYMYCKAVHGELVGEI 356

Query: 302 AEEFAWQYVCLPFDDGKVPHVVSV 325
           AEEFA +YV LPFDDGKVPH+VSV
Sbjct: 357 AEEFAREYVSLPFDDGKVPHLVSV 380