Miyakogusa Predicted Gene
- Lj4g3v0683990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0683990.1 tr|G7JGB1|G7JGB1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_4g0,76.75,0,UNKNOWN PROTEIN,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; no description,Tetratrico,CUFF.47901.1
(692 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 707 0.0
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 408 e-114
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 405 e-113
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 400 e-111
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 373 e-103
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 372 e-103
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 371 e-102
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 369 e-102
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 360 3e-99
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 8e-99
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 2e-98
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 4e-98
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 353 2e-97
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 349 3e-96
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 4e-96
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 8e-96
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 341 1e-93
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 1e-93
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 8e-93
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 1e-91
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 333 2e-91
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 3e-91
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 5e-91
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 7e-91
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 1e-90
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 4e-89
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 8e-89
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 1e-87
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 320 1e-87
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 319 4e-87
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 5e-87
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 5e-87
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 318 5e-87
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 317 2e-86
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 4e-86
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 310 2e-84
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 309 4e-84
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 309 4e-84
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 308 7e-84
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 2e-83
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 5e-83
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 7e-83
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 4e-82
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 6e-82
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 3e-81
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 298 8e-81
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 297 2e-80
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 4e-80
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 5e-80
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 9e-80
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 293 3e-79
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 293 3e-79
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 290 3e-78
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 7e-78
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 2e-77
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 6e-76
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 281 1e-75
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 277 2e-74
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 5e-74
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 5e-74
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 273 3e-73
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 6e-73
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 7e-73
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 271 9e-73
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 2e-72
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 3e-72
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 7e-72
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 266 4e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 8e-71
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 4e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 262 5e-70
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 3e-69
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 5e-69
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 9e-68
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 4e-67
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 5e-67
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 246 3e-65
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 5e-65
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 5e-65
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 241 1e-63
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 3e-63
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 6e-63
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 7e-63
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 2e-62
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 237 2e-62
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 235 8e-62
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 3e-61
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 5e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 8e-61
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 230 3e-60
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 229 6e-60
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 6e-60
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 228 2e-59
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 1e-58
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 5e-58
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 5e-58
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 8e-53
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 2e-51
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 197 1e-50
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 9e-50
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 4e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 7e-43
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 9e-28
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 98 2e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 3e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 83 6e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 9e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 81 3e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 4e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 79 9e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 74 3e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 5e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 72 1e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 72 1e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 2e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 70 5e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 65 2e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 4e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 8e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 59 8e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 1e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 58 2e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 7e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 56 8e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 56 8e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 2e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/679 (52%), Positives = 469/679 (69%), Gaps = 14/679 (2%)
Query: 6 CSLFHSSKSLI-QFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGD-- 62
C F + K LI + S + + P L LS C NID++++ H L +G GD
Sbjct: 19 CVSFTTIKELILTEENDGSSLHYAASSPCFLLLSK-CTNIDSLRQSHGVLTGNGLMGDIS 77
Query: 63 --TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTL 120
TKL+SLY FG+ + AR +FD +P P+ + +K MLR Y LN +VV Y L
Sbjct: 78 IATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLL-MKH 136
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSAR 180
GF +D +VFS LKAC+EL+D+ ++HC ++K D VL GL+D Y+KCG + SA
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAH 196
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
KVF++I RNVV WTSM YV+ND EGL LFNRMRE V GN++T G+L+ ACTKL
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
+LHQGKW HG +VKSGI ++S L TSLL+MYVKCGDI +AR+VF+E +DLV WT
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE----HSHVDLVMWT 312
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
AMIVGY+ G +AL LF I PN +G +HGL +K
Sbjct: 313 AMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKV 372
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
G++D T V NAL+ MYAKC+ DA+YVFE +KD+V+WNS ISG +Q+GS +EAL +F
Sbjct: 373 GIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDG-LVSCSIYVGTALLNFY 479
RM SES +P + VTV + SACASLG+L +GSS+HA+++K G L S S++VGTALL+FY
Sbjct: 432 HRMNSESVTP-NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFY 490
Query: 480 AKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFT 539
AKCGD +SAR++FD + EKN +TWSAMI GYG QGD +GS+ LF +MLK++ +PNE FT
Sbjct: 491 AKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFT 550
Query: 540 SVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPV 599
S+L+AC H+GMV EG + F M ++ NF PS KHY CMVD+LARAG L++ALD I+KMP+
Sbjct: 551 SILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI 610
Query: 600 QPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQV 659
QP V FGA+LHGCG+HS F+LGE+ I++ML+LHPD A YYVLVSNLYASDGRW K+V
Sbjct: 611 QPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEV 670
Query: 660 REMIKQRGLNKVPGCSLVE 678
R ++KQRGL+K+ G S +E
Sbjct: 671 RNLMKQRGLSKIAGHSTME 689
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/675 (36%), Positives = 363/675 (53%), Gaps = 13/675 (1%)
Query: 17 QFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGD----TKLLSLYASF 72
F S +YI + P L C ++ +++ + +G + TKL+SL+ +
Sbjct: 23 HFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY 82
Query: 73 GFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIV 132
G + A R+F+ + S + ML+ + + + F+ RY + F+ +
Sbjct: 83 GSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFTYL 141
Query: 133 LKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNV 191
LK C + ++ +H ++KSG S D F + GL + Y+KC V ARKVFD + ER++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 192 VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGY 251
VSW ++ Y QN A L + M E + + T+ S++ A + L + GK +HGY
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY 261
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
++SG ++T+L++MY KCG + AR++FD ML E ++VSW +MI Y Q +
Sbjct: 262 AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML----ERNVVSWNSMIDAYVQNEN 317
Query: 312 PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA 371
P +A+ +F G+ P G +H L V+ GL N V N+
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
LI MY KC V A +F + +VSWN+ I G AQ+G +AL F +MRS + P
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP- 436
Query: 432 DAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
D T V V++A A L IH ++ L +++V TAL++ YAKCG AR++
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 492 FDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMV 551
FD M E++ TW+AMI GYG G G ++ LF +M K +PN V F SV++ACSHSG+V
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 552 GEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLH 611
G + F+MM + SM HY MVDLL RAG L EA DFI +MPV+P V+V+GA L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 612 GCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKV 671
C +H E A R+ EL+PD Y+VL++N+Y + W V QVR + ++GL K
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 672 PGCSLVEIDLNDTYS 686
PGCS+VEI N+ +S
Sbjct: 676 PGCSMVEIK-NEVHS 689
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/657 (35%), Positives = 357/657 (54%), Gaps = 23/657 (3%)
Query: 41 CKNIDTVKKFHASLIV----HGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAM 96
C N+ + K HA L+V KL++LY G + AR FDH+ + +++++ M
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 97 LRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
+ Y S+V+ + L + G D F VLKAC R V+ ++HC +K G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFG 180
Query: 157 -PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFN 215
D +V L+ YS+ V +AR +FDE+ R++ SW +M Y Q+ A E L L N
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 216 RMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG 275
+R + TV SL++ACT+ G ++G +H Y +K G+ F++ L+++Y + G
Sbjct: 241 GLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 276 DIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXX 335
+ D +KVFD M D L+SW ++I Y PL+A+ LF + + I P+
Sbjct: 297 RLRDCQKVFDRMYVRD----LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 336 XXXXXXXXXXXXXMGMLLHGLVVKCGLF-DNTPVRNALIDMYAKCHLVSDARYVFETTVQ 394
+ G ++ G F ++ + NA++ MYAK LV AR VF
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 395 KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
DV+SWN+ ISG AQ+G A EA+EM+ M E + T V VL AC+ GAL G
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
+H LK+GL ++V T+L + Y KCG + A +F + N+V W+ +I+ +G G
Sbjct: 473 LHGRLLKNGLY-LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
G ++ LF++ML E +P+ + F ++L+ACSHSG+V EG F MM + PS+KHY
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 575 ACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP 634
CMVD+ RAG L+ AL FI M +QP S++GA L C +H +LG++A + E+ P
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 651
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYSKVTIF 691
+ Y+VL+SN+YAS G+W V ++R + +GL K PG S +E+D +KV +F
Sbjct: 652 EHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD-----NKVEVF 703
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/639 (37%), Positives = 349/639 (54%), Gaps = 30/639 (4%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
+KL +Y + G L+ A R+FD + + L W L N + F ++G
Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVK------IEKALFWNILMNELAKSGDFSG----SIGL 182
Query: 123 FH---------DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSD-GFVLNGLVDAYSK 172
F D FS V K+ S LR V +LH ++KSG + V N LV Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 173 CGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSL 232
V SARKVFDE+ ER+V+SW S+ YV N A +GL +F +M ++ + T+ S+
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 233 VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD 292
C + G+ VH VK+ +LL+MY KCGD+ A+ VF EM
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM----S 358
Query: 293 ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGML 352
+ +VS+T+MI GY++ G +A++LF + GI P+ G
Sbjct: 359 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS 412
+H + + L + V NAL+DMYAKC + +A VF KD++SWN+ I G +++
Sbjct: 419 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 478
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
A EAL +F + E PD TV VL ACASL A G IH + +++G S +V
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS-DRHVA 537
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECE 532
+L++ YAKCG A M+FD + K+ V+W+ MI+GYGM G G +IALF M + E
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 533 PNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALD 592
+E+ F S+L ACSHSG+V EG R F++M E P+++HYAC+VD+LAR G+L +A
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657
Query: 593 FIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGR 652
FI+ MP+ P +++GA L GC +H + +L E ++ EL P+ YYVL++N+YA +
Sbjct: 658 FIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 717
Query: 653 WGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYSKVTIF 691
W VK++R+ I QRGL K PGCS +EI +V IF
Sbjct: 718 WEQVKRLRKRIGQRGLRKNPGCSWIEIK-----GRVNIF 751
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 205/429 (47%), Gaps = 14/429 (3%)
Query: 228 TVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
T+ S++ C SL GK V ++ +G ++S L + L MY CGD+ +A +VFDE+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 288 LTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXX 347
+ W ++ ++ G ++ LF +G+ +
Sbjct: 156 KIE----KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 348 XMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGC 407
G LHG ++K G + V N+L+ Y K V AR VF+ ++DV+SWNS I+G
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 408 AQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSC 467
+G A + L +F +M D T+V V + CA + LG ++H+ +K
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML 527
+ T LL+ Y+KCGD SA+ VF M +++ V++++MI+GY +G ++ LF +M
Sbjct: 331 DRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 528 KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
+E P+ T+VL C+ ++ EG R+ H +E + + ++D+ A+ G++
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 588 KEALDFIDKMPVQPGVS---VFGAYLHGCGLHSEFELGEVAIRRMLELHPDQ---ACYYV 641
+EA +M V+ +S + G Y C + L + + PD+ AC
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK-RFSPDERTVACVLP 507
Query: 642 LVSNLYASD 650
++L A D
Sbjct: 508 ACASLSAFD 516
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES 427
VR +I A VSD TT + V N+ + +SG+ A+++
Sbjct: 33 VRKYVIFNRASLRTVSDCVDSI-TTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWD 91
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKS 487
P T+ VL CA +L G + F +G V S +G+ L Y CGD K
Sbjct: 92 IDPR---TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDS-NLGSKLSLMYTNCGDLKE 147
Query: 488 ARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSH 547
A VFD + + A+ W+ +++ GD GSI LF+ M+ E + F+ V + S
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 548 SGMVGEGSRL 557
V G +L
Sbjct: 208 LRSVHGGEQL 217
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 233/683 (34%), Positives = 356/683 (52%), Gaps = 28/683 (4%)
Query: 14 SLIQFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSL---YA 70
S+ Q++SL ++ A T ++I K H +I G L +L YA
Sbjct: 14 SVKQYQSLLNHFAAT-------------QSISKTKALHCHVITGGRVSGHILSTLSVTYA 60
Query: 71 SFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS-FYHLTRYTLGFFHDLVVF 129
G + +AR+LF+ +P +L S+ ++R Y L+ D +S F + + D +
Sbjct: 61 LCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTY 120
Query: 130 SIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAE 188
V KA EL+ + +H +++S D +V N L+ Y G V AR VFD +
Sbjct: 121 PFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKN 180
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWV 248
R+V+SW +M Y +N + L +F+ M VD + T+ S++ C L L G+ V
Sbjct: 181 RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 249 HGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQ 308
H V + + + +L+NMY+KCG + +AR VFD M + D+++WT MI GY++
Sbjct: 241 HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM----ERRDVITWTCMINGYTE 296
Query: 309 RGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPV 368
G ALEL + G+ PN G LHG V+ ++ + +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 369 RNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESF 428
+LI MYAKC V VF + W++ I+GC Q+ +AL +F+RMR E
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 429 SPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSA 488
P + T+ +L A A+L L +IH + K G +S S+ T L++ Y+KCG +SA
Sbjct: 417 EP-NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMS-SLDAATGLVHVYSKCGTLESA 474
Query: 489 RMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAA 544
+F+G+ EK + V W A+ISGYGM GDG ++ +F +M++ PNE+ FTS L A
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 545 CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
CSHSG+V EG LF M + HY C+VDLL RAG L EA + I +P +P +
Sbjct: 535 CSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST 594
Query: 605 VFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIK 664
V+GA L C H +LGE+A ++ EL P+ YVL++N+YA+ GRW +++VR M++
Sbjct: 595 VWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMME 654
Query: 665 QRGLNKVPGCSLVEIDLNDTYSK 687
GL K PG S +EI N ++
Sbjct: 655 NVGLRKKPGHSTIEIRSNSVDTR 677
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/700 (34%), Positives = 363/700 (51%), Gaps = 62/700 (8%)
Query: 32 PPTLYLSPICKNIDTVKKFHASLIVHGFPG---DTKLLSLYASFGFLRHARRLFDHLPSP 88
PP ++ CK I VK H L+ G + L+S Y S G L HA L P
Sbjct: 32 PPFIHK---CKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPS 88
Query: 89 N--LHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
+ ++ + +++R Y N + + + L ++L + D F V KAC E+ V
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLM-HSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 147 RLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
H + +G S+ FV N LV YS+C + ARKVFDE++ +VVSW S+ +Y +
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 206 CAVEGLRLFNRMREGF-VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA 264
L +F+RM F ++ T+ +++ C LG+ GK +H + V S + N F+
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 265 TSLLNMYVKCG----------------------------DIG---DARKVFDEMLTSDDE 293
L++MY KCG IG DA ++F++M +
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 294 LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLL 353
+D+V+W+A I GY+QRG +AL + +GI PN +G L+
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS-----VGALM 382
Query: 354 HGLVVKC------------GLFDNTPVRNALIDMYAKCHLVSDARYVFET--TVQKDVVS 399
HG + C G D V N LIDMYAKC V AR +F++ ++DVV+
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRSESF-SPPDAVTVVGVLSACASLGALPLGSSIHAF 458
W I G +Q G A +ALE+ M E + P+A T+ L ACASL AL +G IHA+
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY 502
Query: 459 ALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVG 518
AL++ + ++V L++ YAKCG AR+VFD M KN VTW+++++GYGM G G
Sbjct: 503 ALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEE 562
Query: 519 SIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMV 578
++ +F +M + + + V VL ACSHSGM+ +G F+ M P +HYAC+V
Sbjct: 563 ALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLV 622
Query: 579 DLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQAC 638
DLL RAG L AL I++MP++P V+ A+L C +H + ELGE A ++ EL +
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDG 682
Query: 639 YYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
Y L+SNLYA+ GRW V ++R +++ +G+ K PGCS VE
Sbjct: 683 SYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/644 (33%), Positives = 341/644 (52%), Gaps = 17/644 (2%)
Query: 43 NIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLR 98
+I + + HA +I+HGF D TKL + G + +AR +F + P++ F ++R
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 99 WYFLN-NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGP 157
+ +N + HS + F HL R + + ++ + A S RD +H + G
Sbjct: 92 GFSVNESPHSSLSVFAHL-RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC 150
Query: 158 SDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLF-N 215
+L + +V Y K V ARKVFD + E++ + W +M Y +N+ VE +++F +
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 216 RMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG 275
+ E + T+ ++ A +L L G +H K+G + + ++ T +++Y KCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 276 DIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXX 335
I +F E + D+V++ AMI GY+ G +L LF + +G
Sbjct: 271 KIKMGSALFREF----RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA---RLRSS 323
Query: 336 XXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK 395
+ +HG +K + V AL +Y+K + + AR +F+ + +K
Sbjct: 324 TLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 396 DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
+ SWN+ ISG Q+G +A+ +F+ M+ FSP + VT+ +LSACA LGAL LG +
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSP-NPVTITCILSACAQLGALSLGKWV 442
Query: 456 HAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGD 515
H S SIYV TAL+ YAKCG AR +FD M +KN VTW+ MISGYG+ G
Sbjct: 443 HDLVRSTDFES-SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 516 GVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYA 575
G ++ +F +ML P V F VL ACSH+G+V EG +F+ M F PS+KHYA
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 576 CMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPD 635
CMVD+L RAG+L+ AL FI+ M ++PG SV+ L C +H + L ++ EL PD
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 636 QACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
Y+VL+SN++++D + VR+ K+R L K PG +L+EI
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/680 (34%), Positives = 357/680 (52%), Gaps = 47/680 (6%)
Query: 41 CKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGF---LRHARRLFDHLPS-PNLHS 92
CK ID +K FH SL G D TKL++ G L A+ +F++ S
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 93 FKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHV 152
+ +++R Y + L ++ + + L G D F L AC++ R ++H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLF-LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 153 IKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
+K G D FV N LV Y++CG + SARKVFDE++ERNVVSWTSM Y + D A + +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 212 RLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
LF RM R+ V N T+ +++AC KL L G+ V+ ++ SGI VN + ++L++M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y+KC I A+++FDE S+ LDL + AM Y ++G +AL +F +G+ P+
Sbjct: 281 YMKCNAIDVAKRLFDEYGASN--LDLCN--AMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL--------- 381
G HG V++ G + NALIDMY KCH
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 382 ----------------------VSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
V A FET +K++VSWN+ ISG Q EA+E+
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFY 479
F M+S+ D VT++ + SAC LGAL L I+ + K+G + + +GT L++ +
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG-IQLDVRLGTTLVDMF 515
Query: 480 AKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFT 539
++CGD +SA +F+ + ++ W+A I M G+ +I LF DM+++ +P+ V F
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 540 SVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPV 599
L ACSH G+V +G +F+ M + P HY CMVDLL RAG L+EA+ I+ MP+
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 600 QPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQV 659
+P ++ + L C + E+ A ++ L P++ YVL+SN+YAS GRW + +V
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 660 REMIKQRGLNKVPGCSLVEI 679
R +K++GL K PG S ++I
Sbjct: 696 RLSMKEKGLRKPPGTSSIQI 715
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/680 (34%), Positives = 357/680 (52%), Gaps = 47/680 (6%)
Query: 41 CKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGF---LRHARRLFDHLPS-PNLHS 92
CK ID +K FH SL G D TKL++ G L A+ +F++ S
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 93 FKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHV 152
+ +++R Y + L ++ + + L G D F L AC++ R ++H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLF-LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 153 IKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
+K G D FV N LV Y++CG + SARKVFDE++ERNVVSWTSM Y + D A + +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 212 RLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
LF RM R+ V N T+ +++AC KL L G+ V+ ++ SGI VN + ++L++M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y+KC I A+++FDE S+ LDL + AM Y ++G +AL +F +G+ P+
Sbjct: 281 YMKCNAIDVAKRLFDEYGASN--LDLCN--AMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL--------- 381
G HG V++ G + NALIDMY KCH
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 382 ----------------------VSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
V A FET +K++VSWN+ ISG Q EA+E+
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFY 479
F M+S+ D VT++ + SAC LGAL L I+ + K+G + + +GT L++ +
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG-IQLDVRLGTTLVDMF 515
Query: 480 AKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFT 539
++CGD +SA +F+ + ++ W+A I M G+ +I LF DM+++ +P+ V F
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 540 SVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPV 599
L ACSH G+V +G +F+ M + P HY CMVDLL RAG L+EA+ I+ MP+
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 600 QPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQV 659
+P ++ + L C + E+ A ++ L P++ YVL+SN+YAS GRW + +V
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 660 REMIKQRGLNKVPGCSLVEI 679
R +K++GL K PG S ++I
Sbjct: 696 RLSMKEKGLRKPPGTSSIQI 715
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/676 (33%), Positives = 364/676 (53%), Gaps = 43/676 (6%)
Query: 32 PPTLYLSPICKNIDTVKKFHASLIVHGFPGDT-----KLLSLYASFGFLRHARRLFDHLP 86
P L ++++ K+ HA + G+ D+ L++LY G ++FD +
Sbjct: 101 PALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS 160
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLT------RYTLGFFHDLVVFSIV--LKACSE 138
N S+ N+L S + SF R L + F++V + ACS
Sbjct: 161 ERNQVSW---------NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 139 L---RDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWT 195
L ++ ++H + ++ G + F++N LV Y K G + S++ + R++V+W
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 196 SMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS 255
++ + QN+ +E L M V+ ++FT+ S++ AC+ L L GK +H Y +K+
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 256 G-IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
G + NSF+ ++L++MY C + R+VFD M D ++ L W AMI GYSQ H +
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF--DRKIGL--WNAMIAGYSQNEHDKE 387
Query: 315 ALELFTD-RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALI 373
AL LF AG+L N +HG VVK GL + V+N L+
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 374 DMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR--------- 424
DMY++ + A +F +D+V+WN+ I+G S +AL + +M+
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 425 -SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
S P+++T++ +L +CA+L AL G IHA+A+K+ L + + VG+AL++ YAKCG
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT-DVAVGSALVDMYAKCG 566
Query: 484 DAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLA 543
+ +R VFD + +KN +TW+ +I YGM G+G +I L R M+ + +PNEV F SV A
Sbjct: 567 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 544 ACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ-PG 602
ACSHSGMV EG R+F++M + PS HYAC+VDLL RAG +KEA ++ MP
Sbjct: 627 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK 686
Query: 603 VSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREM 662
+ + L +H+ E+GE+A + +++L P+ A +YVL++N+Y+S G W +VR
Sbjct: 687 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 746
Query: 663 IKQRGLNKVPGCSLVE 678
+K++G+ K PGCS +E
Sbjct: 747 MKEQGVRKEPGCSWIE 762
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/582 (28%), Positives = 269/582 (46%), Gaps = 32/582 (5%)
Query: 96 MLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK- 154
+LR +NL + V Y + LG D F +LKA ++L+D+ ++H HV K
Sbjct: 68 LLRSKVRSNLLREAVLTY-VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKF 126
Query: 155 -SGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRL 213
G V N LV+ Y KCG + KVFD I+ERN VSW S+ + + L
Sbjct: 127 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 186
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKL---GSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
F M + V+ + FT+ S+VTAC+ L L GK VH Y ++ G +NSF+ +L+ M
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAM 245
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y K G + ++ +L S DLV+W ++ Q L+ALE + G+ P+
Sbjct: 246 YGKLGKLASSKV----LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD-NTPVRNALIDMYAKCHLVSDARYVF 389
G LH +K G D N+ V +AL+DMY C V R VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
+ + + WN+ I+G +Q+ EAL +F M + ++ T+ GV+ AC GA
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISG 509
+IH F +K GL +V L++ Y++ G A +F M +++ VTW+ MI+G
Sbjct: 422 SRKEAIHGFVVKRGL-DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 510 YGMQGDGVGSIALFRDMLKEE-----------CEPNEVVFTSVLAACSHSGMVGEGSRLF 558
Y ++ L M E +PN + ++L +C+ + +G +
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI- 539
Query: 559 HMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSE 618
H + N + + +VD+ A+ G L+ + D++P Q V + + G+H
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Query: 619 FELGEVAIRRML--ELHPDQACYYVLVSNLYASDGRWGMVKQ 658
+ +R M+ + P++ + +++A+ GMV +
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFI----SVFAACSHSGMVDE 636
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/607 (34%), Positives = 329/607 (54%), Gaps = 12/607 (1%)
Query: 78 ARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVV-SFYHLTRYTLGFFHDLVVFSIVLKAC 136
AR++F + +L+ + +L+ +V+ F H+ R D + LKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEK--PDNFTLPVALKAC 70
Query: 137 SELRDVVQAARLHCHVIKSGP--SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSW 194
ELR+V +H V K SD +V + L+ Y KCG + A ++FDE+ + ++V+W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 195 TSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVV 253
+SM + +N + + F RM V + T+ +LV+ACTKL + G+ VHG+V+
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 254 KSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPL 313
+ G + L SLLN Y K +A +F +M+ E D++SW+ +I Y Q G
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF-KMIA---EKDVISWSTVIACYVQNGAAA 246
Query: 314 KALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALI 373
+AL +F D G PN G H L ++ GL V AL+
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 374 DMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDA 433
DMY KC +A VF +KDVVSW + ISG +G A+ ++E F M E+ + PDA
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 434 VTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD 493
+ +V VL +C+ LG L H++ +K G S + ++G +L+ Y++CG +A VF+
Sbjct: 367 ILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS-NPFIGASLVELYSRCGSLGNASKVFN 425
Query: 494 GMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE-ECEPNEVVFTSVLAACSHSGMVG 552
G+ K+ V W+++I+GYG+ G G ++ F M+K E +PNEV F S+L+ACSH+G++
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 553 EGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHG 612
EG R+F +M + P+++HYA +VDLL R G+L A++ +MP P + G L
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 545
Query: 613 CGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVP 672
C +H E+ E +++ EL + A YY+L+SN+Y G W V+++R +KQRG+ K
Sbjct: 546 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
Query: 673 GCSLVEI 679
SL+EI
Sbjct: 606 AESLIEI 612
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 6/222 (2%)
Query: 384 DARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM-RSESFSPPDAVTVVGVLSA 442
DAR +F ++ + WN+ + ++ E L F M R E PD T+ L A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDE--EKPDNFTLPVALKA 69
Query: 443 CASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVT 502
C L + G IH F KD + +YVG++L+ Y KCG A +FD + + + VT
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 503 WSAMISGYGMQGDGVGSIALFRDM-LKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
WS+M+SG+ G ++ FR M + + P+ V ++++AC+ G R H
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG-RCVHGF 188
Query: 562 CRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV 603
F + +++ A++ KEA++ KM + V
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF-KMIAEKDV 229
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/616 (35%), Positives = 329/616 (53%), Gaps = 10/616 (1%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
L+++ FG L A +F + NL S+ ++ Y + + YH + G
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVF 183
D+ F VL+ C + D+ + +H HV++ G D V+N L+ Y KCG V SAR +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
D + R+++SW +M Y +N EGL LF MR VD + T+ S+++AC LG
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
G+ +H YV+ +G V+ + SL MY+ G +A K+F M + D+VSWT MI
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM----ERKDIVSWTTMI 370
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
GY P KA++ + + + P+ G+ LH L +K L
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
V N LI+MY+KC + A +F +K+V+SW S I+G + +EAL ++M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
+ P+A+T+ L+ACA +GAL G IHA L+ G V ++ ALL+ Y +CG
Sbjct: 491 KMTL--QPNAITLTAALAACARIGALMCGKEIHAHVLRTG-VGLDDFLPNALLDMYVRCG 547
Query: 484 DAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLA 543
+A F+ +K+ +W+ +++GY +G G + LF M+K P+E+ F S+L
Sbjct: 548 RMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLC 606
Query: 544 ACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV 603
CS S MV +G F M + P++KHYAC+VDLL RAG L+EA FI KMPV P
Sbjct: 607 GCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 665
Query: 604 SVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMI 663
+V+GA L+ C +H + +LGE++ + + EL YY+L+ NLYA G+W V +VR M+
Sbjct: 666 AVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 725
Query: 664 KQRGLNKVPGCSLVEI 679
K+ GL GCS VE+
Sbjct: 726 KENGLTVDAGCSWVEV 741
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 152/545 (27%), Positives = 259/545 (47%), Gaps = 32/545 (5%)
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVF 183
D VF +++ C R + ++++ + S S G L N + + + G++ A VF
Sbjct: 93 DEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVF 152
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE-GFVDGNDFTVGSLVTACTKLGSL 242
+++ERN+ SW + Y + E + L++RM G V + +T ++ C + L
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
+GK VH +VV+ G ++ + +L+ MYVKCGD+ AR +FD M D++SW AM
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM----PRRDIISWNAM 268
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
I GY + G + LELF + P+ +G +H V+ G
Sbjct: 269 ISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF 328
Query: 363 FDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
+ V N+L MY +A +F +KD+VSW + ISG + +A++ ++
Sbjct: 329 AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRM 388
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKC 482
M +S PD +TV VLSACA+LG L G +H A+K L+S I V L+N Y+KC
Sbjct: 389 MDQDSVK-PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI-VANNLINMYSKC 446
Query: 483 GDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVL 542
A +F + KN ++W+++I+G + ++ R M K +PN + T+ L
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAAL 505
Query: 543 AACSHSGMVGEGSRLFHMMCRE----LNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP 598
AAC+ G + G + + R +F+P+ ++D+ R G + A +
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPN-----ALLDMYVRCGRMNTAWSQFNSQ- 559
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIR---RMLE--LHPDQACYYVLVSNLYASDGRW 653
+ V+ + L G +SE G + + RM++ + PD+ + L+ S
Sbjct: 560 -KKDVTSWNILLTG---YSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ--- 612
Query: 654 GMVKQ 658
MV+Q
Sbjct: 613 -MVRQ 616
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 219/468 (46%), Gaps = 15/468 (3%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K+ H ++ +G+ D L+++Y G ++ AR LFD +P ++ S+ AM+ YF N
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFV 162
+ + + + R L DL+ + V+ AC L D +H +VI +G D V
Sbjct: 276 GMCHEGLELFFAMR-GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
N L Y G A K+F + +++VSWT+M Y N + + + M + V
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSV 394
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
++ TV ++++AC LG L G +H +K+ + +A +L+NMY KC I A
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALD 454
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
+F + +++SWT++I G +AL +F + + PN
Sbjct: 455 IFHNIPRK----NVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACA 509
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
G +H V++ G+ + + NAL+DMY +C ++ A F + +KDV SWN
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNI 568
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
++G ++ G +E+F RM +S PD +T + +L C+ + G ++ ++D
Sbjct: 569 LLTGYSERGQGSMVVELFDRM-VKSRVRPDEITFISLLCGCSKSQMVRQG-LMYFSKMED 626
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISG 509
V+ ++ +++ + G+ + A M + W A+++
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 9/236 (3%)
Query: 404 ISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDG 463
+ G +G EA+++ M+ E D V ++ C A GS +++ AL
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQ-ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALS-S 123
Query: 464 LVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALF 523
+ S + +G A L + + G+ A VF M E+N +W+ ++ GY QG ++ L+
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 524 RDML-KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLA 582
ML +P+ F VL C + G + H+ + + ++ +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV-HVHVVRYGYELDIDVVNALITMYV 242
Query: 583 RAGNLKEALDFIDKMPVQPGVS---VFGAYLHGCGLHSEFELGEVAIRRMLELHPD 635
+ G++K A D+MP + +S + Y H EL R L + PD
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLEL--FFAMRGLSVDPD 296
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 338/643 (52%), Gaps = 18/643 (2%)
Query: 47 VKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYF- 101
V + + L+ GF D T L+ Y G + +AR +FD LP + ++ M+
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 102 LNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDG 160
+ + + FY L + D + S VL ACS L + ++H H+++ G D
Sbjct: 227 MGRSYVSLQLFYQLMEDNV--VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 161 FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREG 220
++N L+D+Y KCG V +A K+F+ + +N++SWT++ Y QN E + LF M +
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 221 FVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDA 280
+ + + S++T+C L +L G VH Y +K+ + +S++ SL++MY KC + DA
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPL---KALELFTDRNWAGILPNXXXXXXX 337
RKVFD + D+V + AMI GYS+ G +AL +F D + I P+
Sbjct: 405 RKVFDIFAAA----DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDV 397
+ +HGL+ K GL + +ALID+Y+ C+ + D+R VF+ KD+
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL 520
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA 457
V WNS +G Q EAL +F ++ S PD T +++A +L ++ LG H
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQL-SRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
LK GL C+ Y+ ALL+ YAKCG + A FD ++ V W+++IS Y G+G
Sbjct: 580 QLLKRGL-ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM 577
++ + M+ E EPN + F VL+ACSH+G+V +G + F +M R P +HY CM
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCM 697
Query: 578 VDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQA 637
V LL RAG L +A + I+KMP +P V+ + L GC EL E A + P +
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDS 757
Query: 638 CYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+ ++SN+YAS G W K+VRE +K G+ K PG S + I+
Sbjct: 758 GSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGIN 800
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/664 (28%), Positives = 328/664 (49%), Gaps = 63/664 (9%)
Query: 51 HASLIVHGFPGDTKL----LSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLH 106
H +IV G DT L ++LY+ G + +AR++F+ +P NL S+ M+ + ++
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 107 SD-VVSFYHLTRYTLGFFHDLVVFSIVLKACSEL--RDVVQAARLHCHVIKSG-PSDGFV 162
+ +V F R ++ ++ S + +ACS L R +L ++KSG D +V
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFI-QACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
L+D Y K G++ AR VFD + E++ V+WT+M V+ + L+LF ++ E V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
+ + + ++++AC+ L L GK +H ++++ G+ +++ L L++ YVKCG + A K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
+F+ M +++SWT ++ GY Q +A+ELFT + G+ P+
Sbjct: 306 LFNGMPNK----NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
G +H +K L +++ V N+LIDMYAKC ++DAR VF+ DVV +N+
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNA 421
Query: 403 FISGCAQSGSAY---EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA 459
I G ++ G+ + EAL +F+ MR P +T V +L A ASL +L L IH
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFR-LIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGS 519
K GL + I+ G+AL++ Y+ C K +R+VFD M K+ V W++M +GY Q + +
Sbjct: 481 FKYGL-NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 520 IALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFH--MMCRELNFVPSMKHYACM 577
+ LF ++ P+E F +++ A + V G FH ++ R L P + + +
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYITN--AL 596
Query: 578 VDLLARAGNL-------------------------------KEALDFIDKM---PVQPGV 603
+D+ A+ G+ K+AL ++KM ++P
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 604 SVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSNLYASDGRWGMVKQVRE 661
F L C E G ML + P+ Y +VS L GR G + + RE
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL----GRAGRLNKARE 712
Query: 662 MIKQ 665
+I++
Sbjct: 713 LIEK 716
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 271/555 (48%), Gaps = 42/555 (7%)
Query: 148 LHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDC 206
+H +I G D ++ N L++ YS+ G + ARKVF+++ ERN+VSW++M A +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 207 AVEGLRLFNRMREGFVDG-NDFTVGSLVTACTKLGSLHQGKW----VHGYVVKSGIHVNS 261
E L +F D N++ + S + AC+ L +G+W + ++VKSG +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDV 183
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
++ T L++ Y+K G+I AR VFD + E V+WT MI G + G +L+LF
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDAL----PEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
++P+ G +H +++ GL + + N LID Y KC
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 382 VSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLS 441
V A +F K+++SW + +SG Q+ EA+E+F M S+ PD +L+
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILT 358
Query: 442 ACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAV 501
+CASL AL G+ +HA+ +K L + S YV +L++ YAKC AR VFD + V
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDS-YVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 502 TWSAMISGY---GMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF 558
++AMI GY G Q + ++ +FRDM P+ + F S+L A + +G ++
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 559 HMMCRE-LNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV---SVFGAYLHGCG 614
+M + LN + + ++D+ + LK++ D+M V+ V S+F Y+
Sbjct: 478 GLMFKYGLNL--DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ--- 532
Query: 615 LHSEFELGEVAIRRMLELH-----PDQACYYVLVSNLYASDGRWGMVKQVRE---MIKQR 666
SE E A+ LEL PD+ + +N+ + G V+ +E + +R
Sbjct: 533 -QSE---NEEALNLFLELQLSRERPDEFTF----ANMVTAAGNLASVQLGQEFHCQLLKR 584
Query: 667 GLNKVPGCSLVEIDL 681
GL P + +D+
Sbjct: 585 GLECNPYITNALLDM 599
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 215/448 (47%), Gaps = 19/448 (4%)
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
LH VHG ++ G+ ++++L+ L+N+Y + G + ARKVF++M E +LVSW+
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM----PERNLVSWST 115
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGIL--PNXXXXXXXXXXXXXXXXXXMGML--LHGLV 357
M+ + G ++L +F + W PN M+ L +
Sbjct: 116 MVSACNHHGIYEESLVVFLEF-WRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFL 174
Query: 358 VKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEAL 417
VK G + V LID Y K + AR VF+ +K V+W + ISGC + G +Y +L
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
++F ++ ++ PD + VLSAC+ L L G IHA L+ GL + L++
Sbjct: 235 QLFYQLMEDNV-VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL-EMDASLMNVLID 292
Query: 478 FYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVV 537
Y KCG +A +F+GM KN ++W+ ++SGY ++ LF M K +P+
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
Query: 538 FTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
+S+L +C+ +G G+++ H + N ++D+ A+ L +A D +
Sbjct: 353 CSSILTSCASLHALGFGTQV-HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD-I 410
Query: 598 PVQPGVSVFGAYLHGCG-LHSEFELGE-VAIRRMLELHPDQACYYVLVSNLYASDG--RW 653
V +F A + G L +++EL E + I R + + VS L AS
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 654 GMVKQVREMIKQRGLNK--VPGCSLVEI 679
G+ KQ+ ++ + GLN G +L+++
Sbjct: 471 GLSKQIHGLMFKYGLNLDIFAGSALIDV 498
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 360 bits (923), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 303/537 (56%), Gaps = 6/537 (1%)
Query: 144 QAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYV 202
Q ++H ++ G GF++ L+ A S G + AR+VFD++ + W ++ Y
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 203 QNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF 262
+N+ + L +++ M+ V + FT L+ AC+ L L G++VH V + G + F
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 263 LATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR 322
+ L+ +Y KC +G AR VF+ + E +VSWTA++ Y+Q G P++ALE+F+
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLP--ERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 323 NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLV 382
+ P+ G +H VVK GL + +L MYAKC V
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 383 SDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSA 442
+ A+ +F+ +++ WN+ ISG A++G A EA++MF M ++ P D +++ +SA
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP-DTISITSAISA 332
Query: 443 CASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVT 502
CA +G+L S++ + + +++ +AL++ +AKCG + AR+VFD +++ V
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRD-DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 503 WSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMC 562
WSAMI GYG+ G +I+L+R M + PN+V F +L AC+HSGMV EG F+ M
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA 451
Query: 563 RELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELG 622
+ P +HYAC++DLL RAG+L +A + I MPVQPGV+V+GA L C H ELG
Sbjct: 452 -DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 623 EVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
E A +++ + P +YV +SNLYA+ W V +VR +K++GLNK GCS VE+
Sbjct: 511 EYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 225/434 (51%), Gaps = 21/434 (4%)
Query: 31 HPPTLYLSPI--CKNIDTVKKFHASLIVHG--FPG--DTKLLSLYASFGFLRHARRLFDH 84
H + Y S I + +K+ HA L+V G F G TKL+ +SFG + AR++FD
Sbjct: 19 HSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 85 LPSPNLHSFKAMLRWYFLNNLHSDVVSFY---HLTRYTLGFFHDLVVFSIVLKACSELRD 141
LP P + + A++R Y NN D + Y L R + F F +LKACS L
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSF----TFPHLLKACSGLSH 134
Query: 142 VVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFD--EIAERNVVSWTSMF 198
+ +H V + G +D FV NGL+ Y+KC + SAR VF+ + ER +VSWT++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 199 VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
AY QN +E L +F++MR+ V + + S++ A T L L QG+ +H VVK G+
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
+ L SL MY KCG + A+ +FD+M + +L+ W AMI GY++ G+ +A+++
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSP----NLILWNAMISGYAKNGYAREAIDM 310
Query: 319 FTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAK 378
F + + P+ ++ V + D+ + +ALIDM+AK
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
C V AR VF+ T+ +DVV W++ I G G A EA+ +++ M P D VT +G
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND-VTFLG 429
Query: 439 VLSACASLGALPLG 452
+L AC G + G
Sbjct: 430 LLMACNHSGMVREG 443
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 209/635 (32%), Positives = 330/635 (51%), Gaps = 77/635 (12%)
Query: 120 LGFFHDLVVFSIVLKACSELR-DVVQAARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVC 177
L F D F+ +L +C + + + +H VIKSG S+ F+ N L+DAYSKCG +
Sbjct: 13 LSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72
Query: 178 SARKVFDEIAERNV-------------------------------VSWTSMFVAYVQNDC 206
R+VFD++ +RN+ +W SM + Q+D
Sbjct: 73 DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 207 AVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLAT 265
E L F M +EGFV N+++ S+++AC+ L +++G VH + KS + ++ +
Sbjct: 133 CEEALCYFAMMHKEGFV-LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGS 191
Query: 266 SLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWA 325
+L++MY KCG++ DA++VFDEM + ++VSW ++I + Q G ++AL++F +
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEM----GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLES 247
Query: 326 GILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPV-RNALIDMYAKCHLVSD 384
+ P+ +G +HG VVK N + NA +DMYAKC + +
Sbjct: 248 RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKE 307
Query: 385 ARYVFETT-------------------------------VQKDVVSWNSFISGCAQSGSA 413
AR++F++ +++VVSWN+ I+G Q+G
Sbjct: 308 ARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN 367
Query: 414 YEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS----- 468
EAL +F ++ ES P + +L ACA L L LG H LK G S
Sbjct: 368 EEALSLFCLLKRESVCPTH-YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
I+VG +L++ Y KCG + +VF M E++ V+W+AMI G+ G G ++ LFR+ML+
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
+P+ + VL+AC H+G V EG F M R+ P HY CMVDLL RAG L+
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLE 546
Query: 589 EALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYA 648
EA I++MP+QP ++G+ L C +H LG+ ++LE+ P + YVL+SN+YA
Sbjct: 547 EAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYA 606
Query: 649 SDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLND 683
G+W V VR+ +++ G+ K PGCS ++I +D
Sbjct: 607 ELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHD 641
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/676 (31%), Positives = 362/676 (53%), Gaps = 21/676 (3%)
Query: 20 SLSSYIAFTLPHPPTLYLSPICKNIDTVKKF------HASLIVHGFPGD----TKLLSLY 69
+ SS +A L P T + K ++++ H ++V+GF D + L++LY
Sbjct: 33 TFSSMLANKLL-PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLY 91
Query: 70 ASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVF 129
A FG L HAR++F+ + ++ + AM+ Y + + S + R+ G V
Sbjct: 92 AKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ-GIKPGPVT- 149
Query: 130 SIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAE 188
+L+ S + ++ Q LH + G D V+N +++ Y KC HV A+ +FD++ +
Sbjct: 150 --LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWV 248
R++VSW +M Y E L+L RMR + + T G+ ++ + L G+ +
Sbjct: 208 RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
Query: 249 HGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQ 308
H +VK+G V+ L T+L+ MY+KCG + +V + + D +V WT MI G +
Sbjct: 268 HCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD----VVCWTVMISGLMR 323
Query: 309 RGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPV 368
G KAL +F++ +G + +G +HG V++ G +TP
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 369 RNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESF 428
N+LI MYAKC + + +FE ++D+VSWN+ ISG AQ+ +AL +F+ M+ ++
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 429 SPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSA 488
D+ TVV +L AC+S GALP+G IH ++ + CS+ V TAL++ Y+KCG ++A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL-VDTALVDMYSKCGYLEAA 502
Query: 489 RMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHS 548
+ FD + K+ V+W +I+GYG G G ++ ++ + L EPN V+F +VL++CSH+
Sbjct: 503 QRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHN 562
Query: 549 GMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGA 608
GMV +G ++F M R+ P+ +H AC+VDLL RA +++A F + +P + V G
Sbjct: 563 GMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGI 622
Query: 609 YLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGL 668
L C + + E+ ++ M+EL P A +YV + + +A+ RW V + ++ GL
Sbjct: 623 ILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGL 682
Query: 669 NKVPGCSLVEIDLNDT 684
K+PG S +E++ T
Sbjct: 683 KKLPGWSKIEMNGKTT 698
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 225/478 (47%), Gaps = 14/478 (2%)
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
L F+ M + + FT SL+ AC L L G +H V+ +G + ++++SL+N+
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y K G + ARKVF+EM E D+V WTAMI YS+ G +A L + + GI P
Sbjct: 91 YAKFGLLAHARKVFEEM----RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE 390
LH V G + V N+++++Y KC V DA+ +F+
Sbjct: 147 PVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 391 TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALP 450
Q+D+VSWN+ ISG A G+ E L++ RMR + PD T LS ++ L
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR-PDQQTFGASLSVSGTMCDLE 262
Query: 451 LGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGY 510
+G +H +K G +++ TAL+ Y KCG +++ V + + K+ V W+ MISG
Sbjct: 263 MGRMLHCQIVKTGF-DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGL 321
Query: 511 GMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPS 570
G ++ +F +ML+ + + SV+A+C+ G G+ + + R +
Sbjct: 322 MRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH-GYTLD 380
Query: 571 MKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRML 630
++ + A+ G+L ++L ++M + VS + A + G + + + M
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVS-WNAIISGYAQNVDLCKALLLFEEMK 439
Query: 631 ELHPDQACYYVLVSNLYASDGRWGM-VKQVREMIKQRGLNKVPGCSLVEIDLNDTYSK 687
Q + +VS L A + V ++ I R + CSLV+ L D YSK
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF--IRPCSLVDTALVDMYSK 495
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 206/620 (33%), Positives = 325/620 (52%), Gaps = 9/620 (1%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
+ L+ Y +G + +LFD + + + ML Y V+ + + R
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD-QI 235
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARK 181
+ V F VL C+ + +LH V+ SG +G + N L+ YSKCG A K
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
+F ++ + V+W M YVQ+ E L F M V + T SL+ + +K +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
L K +H Y+++ I ++ FL ++L++ Y KC + A+ +F + + +D+V +TA
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC----NSVDVVVFTA 411
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
MI GY G + +LE+F I PN +G LHG ++K G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
+ + A+IDMYAKC ++ A +FE ++D+VSWNS I+ CAQS + A+++F+
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
+M D V++ LSACA+L + G +IH F +K L S +Y + L++ YAK
Sbjct: 532 QMGVSGICY-DCVSISAALSACANLPSESFGKAIHGFMIKHSLAS-DVYSESTLIDMYAK 589
Query: 482 CGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML-KEECEPNEVVFTS 540
CG+ K+A VF M EKN V+W+++I+ G G S+ LF +M+ K P+++ F
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ 600
++++C H G V EG R F M + P +HYAC+VDL RAG L EA + + MP
Sbjct: 650 IISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFP 709
Query: 601 PGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVR 660
P V+G L C LH EL EVA ++++L P + YYVL+SN +A+ W V +VR
Sbjct: 710 PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVR 769
Query: 661 EMIKQRGLNKVPGCSLVEID 680
++K+R + K+PG S +EI+
Sbjct: 770 SLMKEREVQKIPGYSWIEIN 789
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 177/680 (26%), Positives = 314/680 (46%), Gaps = 43/680 (6%)
Query: 13 KSLIQFRSLSSYIAFTLPHPPTLYLSPICKNIDTV---KKFHASLIVHGFPGDT----KL 65
K + R+ S ++ T+P +L L C N + + K+ HA LIV+ GD+ ++
Sbjct: 18 KKSLPLRNSSRFLEETIPRRLSLLLQA-CSNPNLLRQGKQVHAFLIVNSISGDSYTDERI 76
Query: 66 LSLYASFGFLRHARRLFDHLP--SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFF 123
L +YA G ++F L ++ + +++ + N L + ++FY G
Sbjct: 77 LGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFY-FKMLCFGVS 135
Query: 124 HDLVVFSIVLKACSELR---------DVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCG 174
D+ F ++KAC L+ D V + + C + FV + L+ AY + G
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDC--------NEFVASSLIKAYLEYG 187
Query: 175 HVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVT 234
+ K+FD + +++ V W M Y + ++ F+ MR + N T +++
Sbjct: 188 KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
C + G +HG VV SG+ + SLL+MY KCG DA K+F M
Sbjct: 248 VCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM----SRA 303
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
D V+W MI GY Q G ++L F + +G+LP+ +H
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
+++ + + + +ALID Y KC VS A+ +F DVV + + ISG +G
Sbjct: 364 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS-CSIYVGT 473
++LEMF+ + S P+ +T+V +L L AL LG +H F +K G + C+I G
Sbjct: 424 DSLEMFRWLVKVKIS-PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI--GC 480
Query: 474 ALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEP 533
A+++ YAKCG A +F+ + +++ V+W++MI+ + +I +FR M
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 534 NEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDF 593
+ V ++ L+AC++ G + M + + + + ++D+ A+ GNLK A++
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKH-SLASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 594 IDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE---LHPDQACYYVLVSN-LYAS 649
M + VS + + + CG H + + M+E + PDQ + ++S+ +
Sbjct: 600 FKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVG 658
Query: 650 DGRWGMVKQVREMIKQRGLN 669
D G V+ R M + G+
Sbjct: 659 DVDEG-VRFFRSMTEDYGIQ 677
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/584 (35%), Positives = 315/584 (53%), Gaps = 43/584 (7%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGL--VDAYSKCGHVCSARKVFDEIAE 188
+++ C LR + Q H H+I++G SD + + L + A S + ARKVFDEI +
Sbjct: 36 LIERCVSLRQLKQT---HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLF-NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
N +W ++ AY V + F + + E N +T L+ A ++ SL G+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
+HG VKS + + F+A SL++ Y CGD+ A KVF T+ E D+VSW +MI G+
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF----TTIKEKDVVSWNSMINGFV 208
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
Q+G P KALELF + + G + + + + N
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 368 VRNALIDMYAKCHLVSDARYVFE----------TTV---------------------QKD 396
+ NA++DMY KC + DA+ +F+ TT+ QKD
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
+V+WN+ IS Q+G EAL +F ++ + + +T+V LSACA +GAL LG IH
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDG 516
++ K G + + +V +AL++ Y+KCGD + +R VF+ + +++ WSAMI G M G G
Sbjct: 389 SYIKKHG-IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC 576
++ +F M + +PN V FT+V ACSH+G+V E LFH M VP KHYAC
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 577 MVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQ 636
+VD+L R+G L++A+ FI+ MP+ P SV+GA L C +H+ L E+A R+LEL P
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Query: 637 ACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+VL+SN+YA G+W V ++R+ ++ GL K PGCS +EID
Sbjct: 568 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/508 (29%), Positives = 239/508 (47%), Gaps = 69/508 (13%)
Query: 14 SLIQFRSLSSYIAFTLPHPPT--------LYLSPICKNIDTVKKFHASLIVHGFPGD--- 62
S Q SL + F+ P+ PT + L C ++ +K+ H +I G D
Sbjct: 5 STAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYS 64
Query: 63 -TKLLSLYA--SFGFLRHARRLFDHLPSPNLHSFKAMLR------------WYFLNNLHS 107
+KL ++ A SF L +AR++FD +P PN ++ ++R W FL+ +
Sbjct: 65 ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124
Query: 108 DVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGL 166
S + +YT F ++KA +E+ + LH +KS SD FV N L
Sbjct: 125 ---SQCYPNKYT---------FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSL 172
Query: 167 VDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND 226
+ Y CG + SA KVF I E++VVSW SM +VQ + L LF +M V +
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232
Query: 227 FTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFD- 285
T+ +++AC K+ +L G+ V Y+ ++ ++VN LA ++L+MY KCG I DA+++FD
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 286 --------------------------EMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF 319
E+L S + D+V+W A+I Y Q G P +AL +F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 320 TDRNWAGILP-NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAK 378
+ + N +G +H + K G+ N V +ALI MY+K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
C + +R VF + ++DV W++ I G A G EA++MF +M+ E+ P+ VT
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ-EANVKPNGVTFTN 471
Query: 439 VLSACASLGALPLGSSI-HAFALKDGLV 465
V AC+ G + S+ H G+V
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIV 499
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/668 (31%), Positives = 332/668 (49%), Gaps = 24/668 (3%)
Query: 36 YLSPIC-----KNIDTVKKFHASLIVHGFPGDTKL----LSLYASFGFLRHARRLFDHLP 86
Y+S IC +++ +K H ++ DT L LS+Y G LR AR +FD +P
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
NL S+ +++ Y N ++ + Y L D F ++KAC+ DV
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLY-LKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 147 RLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
+LH VIK S + N L+ Y + + A +VF I ++++SW+S+ + Q
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 206 CAVEGLRLFNRMRE-GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA 264
E L M G N++ GS + AC+ L G +HG +KS + N+
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
SL +MY +CG + AR+VFD++ + D SW +I G + G+ +A+ +F+
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQI----ERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
+G +P+ GM +H ++K G + V N+L+ MY C +
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 385 ARYVFET-TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSAC 443
+FE D VSWN+ ++ C Q E L +F+ M S PD +T+ +L C
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLV-SECEPDHITMGNLLRGC 483
Query: 444 ASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTW 503
+ +L LGS +H ++LK GL ++ L++ YAKCG AR +FD M ++ V+W
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAP-EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSW 542
Query: 504 SAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
S +I GY G G ++ LF++M EPN V F VL ACSH G+V EG +L+ M
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT 602
Query: 564 ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
E P+ +H +C+VDLLARAG L EA FID+M ++P V V+ L C L +
Sbjct: 603 EHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQ 662
Query: 624 VAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLND 683
A +L++ P + +VL+ +++AS G W +R +K+ + K+PG S +EI+
Sbjct: 663 KAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIE--- 719
Query: 684 TYSKVTIF 691
K+ IF
Sbjct: 720 --DKIHIF 725
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 245/505 (48%), Gaps = 10/505 (1%)
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGF 161
+N + + + + + F L + ++ ACS R + Q ++H H++ S D
Sbjct: 44 SNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI 103
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
+ N ++ Y KCG + AR+VFD + ERN+VS+TS+ Y QN E +RL+ +M +
Sbjct: 104 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED 163
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR 281
+ + F GS++ AC + GK +H V+K + +L+ MYV+ + DA
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL-PNXXXXXXXXXX 340
+VF + DL+SW+++I G+SQ G +AL + G+ PN
Sbjct: 224 RVFYGIPMK----DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKA 279
Query: 341 XXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSW 400
G +HGL +K L N +L DMYA+C ++ AR VF+ + D SW
Sbjct: 280 CSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASW 339
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFAL 460
N I+G A +G A EA+ +F +MRS F PDA+++ +L A AL G IH++ +
Sbjct: 340 NVIIAGLANNGYADEAVSVFSQMRSSGF-IPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 461 KDGLVSCSIYVGTALLNFYAKCGDAKSARMVF-DGMGEKNAVTWSAMISGYGMQGDGVGS 519
K G ++ + V +LL Y C D +F D ++V+W+ +++ V
Sbjct: 399 KWGFLA-DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 520 IALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
+ LF+ ML ECEP+ + ++L C + GS++ H + P ++D
Sbjct: 458 LRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV-HCYSLKTGLAPEQFIKNGLID 516
Query: 580 LLARAGNLKEALDFIDKMPVQPGVS 604
+ A+ G+L +A D M + VS
Sbjct: 517 MYAKCGSLGQARRIFDSMDNRDVVS 541
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 13/286 (4%)
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFAL 460
N I+ +S EALE F + S T + ++ AC+S +L G IH L
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 461 KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSI 520
+I + +L+ Y KCG + AR VFD M E+N V+++++I+GY G G +I
Sbjct: 95 NSNCKYDTI-LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAI 153
Query: 521 ALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDL 580
L+ ML+E+ P++ F S++ AC+ S VG G +L H +L + ++ +
Sbjct: 154 RLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL-HAQVIKLESSSHLIAQNALIAM 212
Query: 581 LARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE---LHPDQA 637
R + +A +P++ +S L EFE ++ ML HP++
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFE-ALSHLKEMLSFGVFHPNE- 270
Query: 638 CYYVLVSNLYASDG--RWGMVKQVREMIKQRGL--NKVPGCSLVEI 679
Y+ S+L A R Q+ + + L N + GCSL ++
Sbjct: 271 --YIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 222/635 (34%), Positives = 335/635 (52%), Gaps = 39/635 (6%)
Query: 64 KLLSLYASFGFLRHARRLFDHLPSPNLH--SFKAMLRWYFLNNLHSDVVSFYHL------ 115
L LYAS + AR +FD +P P ++ ++ M+R Y N+ + Y+
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 116 --TRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSK 172
T+YT F VLKAC+ LR + +H HV S +D +V LVD Y+K
Sbjct: 100 RPTKYTYPF---------VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAK 150
Query: 173 CGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDG---NDFTV 229
CG + A KVFDE+ +R++V+W +M + + C + + LF MR +DG N T+
Sbjct: 151 CGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRR--IDGLSPNLSTI 208
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
+ A + G+L +GK VHGY + G + + T +L++Y K I AR+VFD
Sbjct: 209 VGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD---- 264
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELF----TDRNWAGILPNXXXXXXXXXXXXXXX 345
D + + V+W+AMI GY + +A E+F + N A + P
Sbjct: 265 LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFG 322
Query: 346 XXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFIS 405
G +H VK G + V+N +I YAK + DA F KDV+S+NS I+
Sbjct: 323 DLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLIT 382
Query: 406 GCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLV 465
GC + E+ +F MR+ P D T++GVL+AC+ L AL GSS H + + G
Sbjct: 383 GCVVNCRPEESFRLFHEMRTSGIRP-DITTLLGVLTACSHLAALGHGSSCHGYCVVHGY- 440
Query: 466 SCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRD 525
+ + + AL++ Y KCG A+ VFD M +++ V+W+ M+ G+G+ G G +++LF
Sbjct: 441 AVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNS 500
Query: 526 MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR-ELNFVPSMKHYACMVDLLARA 584
M + P+EV ++L+ACSHSG+V EG +LF+ M R + N +P + HY CM DLLARA
Sbjct: 501 MQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARA 560
Query: 585 GNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVS 644
G L EA DF++KMP +P + V G L C + ELG ++M L VL+S
Sbjct: 561 GYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLS 619
Query: 645 NLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
N Y++ RW ++R + K+RGL K PG S V++
Sbjct: 620 NTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 208/437 (47%), Gaps = 19/437 (4%)
Query: 33 PTLYLSPIC-------KNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRL 81
PT Y P + ID K H+ + F D T L+ YA G L A ++
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKV 160
Query: 82 FDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRD 141
FD +P ++ ++ AM+ + L+ +DV+ + R G +L + A
Sbjct: 161 FDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGA 220
Query: 142 VVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVA 200
+ + +H + + G S+ V+ G++D Y+K + AR+VFD ++N V+W++M
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
Query: 201 YVQNDCAVEGLRLFNRM--REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
YV+N+ E +F +M + +G ++ C + G L G+ VH Y VK+G
Sbjct: 281 YVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFI 340
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
++ + ++++ Y K G + DA + F E+ D++S+ ++I G P ++ L
Sbjct: 341 LDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK----DVISYNSLITGCVVNCRPEESFRL 396
Query: 319 FTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAK 378
F + +GI P+ G HG V G NT + NAL+DMY K
Sbjct: 397 FHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTK 456
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
C + A+ VF+T ++D+VSWN+ + G G EAL +F M+ E+ PD VT++
Sbjct: 457 CGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ-ETGVNPDEVTLLA 515
Query: 439 VLSACASLGALPLGSSI 455
+LSAC+ G + G +
Sbjct: 516 ILSACSHSGLVDEGKQL 532
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 183/406 (45%), Gaps = 17/406 (4%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K H GF D T +L +YA + +ARR+FD N ++ AM+ Y N
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 104 NLHSDV--VSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDG 160
+ + V F L + V ++L C+ D+ +HC+ +K+G D
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTP-VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDL 343
Query: 161 FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREG 220
V N ++ Y+K G +C A + F EI ++V+S+ S+ V N E RLF+ MR
Sbjct: 344 TVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS 403
Query: 221 FVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDA 280
+ + T+ ++TAC+ L +L G HGY V G VN+ + +L++MY KCG + A
Sbjct: 404 GIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX 340
++VFD M + D+VSW M+ G+ G +AL LF G+ P+
Sbjct: 464 KRVFDTM----HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 341 XXXXXXXXMGMLLHGLVVKCGLFDNTPV---RNALIDMYAKCHLVSDA-RYVFETTVQKD 396
G L + + G F+ P N + D+ A+ + +A +V + + D
Sbjct: 520 CSHSGLVDEGKQLFNSMSR-GDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPD 578
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSA 442
+ + +S C +A E+ ++M+S + V + SA
Sbjct: 579 IRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLLSNTYSA 624
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 177/386 (45%), Gaps = 8/386 (2%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNS-FLATSLLNMYVKCGDIGDARKVFDEMLT 289
SL+ C + +L G+ +H +++K + ++S + +L +Y C ++ AR VFDE+
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI-- 61
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
++ ++W MI Y+ KAL+L+ +G+ P
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G L+H V + V AL+D YAKC + A VF+ ++D+V+WN+ ISG +
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
+ + +F MR P+ T+VG+ A GAL G ++H + + G S +
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF-SNDL 240
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE 529
V T +L+ YAK AR VFD +KN VTWSAMI GY + +F ML
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 530 E--CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
+ V +L C+ G + G R H + F+ + ++ A+ G+L
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDL-SGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 588 KEALDFIDKMPVQPGVSVFGAYLHGC 613
+A ++ ++ +S + + + GC
Sbjct: 360 CDAFRQFSEIGLKDVIS-YNSLITGC 384
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
+ +L C L LG IH LK L S V L YA C + + AR VFD +
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 497 EK--NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
N + W MI Y ++ L+ ML P + + VL AC+ + +G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 555 SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCG 614
+L H +F M +VD A+ G L+ A+ D+MP + V+ + A + G
Sbjct: 123 -KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVA-WNAMISGFS 180
Query: 615 LH 616
LH
Sbjct: 181 LH 182
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 354/640 (55%), Gaps = 20/640 (3%)
Query: 49 KFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
K H +I G D T LL +Y G L A ++FD +P +L ++ ++ N
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 105 LHSDVVSFYHLTRYTL--GFFHDLVVFSIVLKACSELRDVVQAARLHCHVI-KSGPSDGF 161
+VV + + + G D V V++ C+EL + A +H + K D
Sbjct: 182 ---EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
+ N L+ YSKCG + S+ ++F++IA++N VSWT+M +Y + + + + LR F+ M +
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVN-SFLATSLLNMYVKCGDIGDA 280
++ N T+ S++++C +G + +GK VHG+ V+ + N L+ +L+ +Y +CG + D
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX 340
V + SD ++V+W ++I Y+ RG ++AL LF I P+
Sbjct: 359 ETVL--RVVSDR--NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 341 XXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSW 400
+G +HG V++ + D V+N+LIDMY+K V A VF + VV+W
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTW 473
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFAL 460
NS + G +Q+G++ EA+ +F M S+ + VT + V+ AC+S+G+L G +H +
Sbjct: 474 NSMLCGFSQNGNSVEAISLFDYMY-HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI 532
Query: 461 KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSI 520
GL ++ TAL++ YAKCGD +A VF M ++ V+WS+MI+ YGM G +I
Sbjct: 533 ISGLKD--LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAI 590
Query: 521 ALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDL 580
+ F M++ +PNEVVF +VL+AC HSG V EG F++M + P+ +H+AC +DL
Sbjct: 591 STFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDL 649
Query: 581 LARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYY 640
L+R+G+LKEA I +MP SV+G+ ++GC +H + ++ + + ++ D YY
Sbjct: 650 LSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYY 709
Query: 641 VLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
L+SN+YA +G W +++R +K L KVPG S +EID
Sbjct: 710 TLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 286/560 (51%), Gaps = 22/560 (3%)
Query: 41 CKNIDTVKKFHASLIVHG------FPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFK 94
C ++ V + HA L+V G P TKL+ YA G +R +F+ P P+ +
Sbjct: 11 CSSLRLVSQLHAHLLVTGRLRRDPLPV-TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG 69
Query: 95 AMLRWYFLNNLHSDVVSFYH-LTRYTLGFFHDLVVFSIVLKACSELRDVVQ-AARLHCHV 152
+++ +L + YH L T VF VL+AC+ R+ + ++H +
Sbjct: 70 VLIKCNVWCHLLDAAIDLYHRLVSETTQISK--FVFPSVLRACAGSREHLSVGGKVHGRI 127
Query: 153 IKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
IK G D V+ L+ Y + G++ A KVFD + R++V+W+++ + ++N V+ L
Sbjct: 128 IKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKAL 187
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
R+F M + V+ + T+ S+V C +LG L + VHG + + ++ L SLL MY
Sbjct: 188 RMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY 247
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
KCGD+ + ++F+++ + VSWTAMI Y++ KAL F++ +GI PN
Sbjct: 248 SKCGDLLSSERIFEKIAKK----NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDN-TPVRNALIDMYAKCHLVSDARYVFE 390
G +HG V+ L N + AL+++YA+C +SD V
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 391 TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALP 450
+++V+WNS IS A G +AL +F++M ++ PDA T+ +SAC + G +P
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI-KPDAFTLASSISACENAGLVP 422
Query: 451 LGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGY 510
LG IH ++ + +V +L++ Y+K G SA VF+ + ++ VTW++M+ G+
Sbjct: 423 LGKQIHGHVIRTDV--SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480
Query: 511 GMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPS 570
G+ V +I+LF M E NEV F +V+ ACS G + +G + H + ++ +
Sbjct: 481 SQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI--ISGLKD 538
Query: 571 MKHYACMVDLLARAGNLKEA 590
+ ++D+ A+ G+L A
Sbjct: 539 LFTDTALIDMYAKCGDLNAA 558
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/530 (26%), Positives = 249/530 (46%), Gaps = 44/530 (8%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGP--SDGFVLNGLVDAYSKCGHVCSARKVFDEIAER 189
+ ++CS LR V Q LH H++ +G D + L+++Y+ G S+R VF+
Sbjct: 7 LFRSCSSLRLVSQ---LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS---LHQGK 246
+ + + V + L++R+ + F S++ AC GS L G
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLSVGG 121
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
VHG ++K G+ ++ + TSLL MY + G++ DA KVFD M DLV+W+ ++
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR----DLVAWSTLVSSC 177
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD-N 365
+ G +KAL +F G+ P+ + +HG + + +FD +
Sbjct: 178 LENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR-KMFDLD 236
Query: 366 TPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
+ N+L+ MY+KC + + +FE +K+ VSW + IS + + +AL F M
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM-I 295
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
+S P+ VT+ VLS+C +G + G S+H FA++ L + AL+ YA+CG
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKL 355
Query: 486 KSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAAC 545
V + ++N V W+++IS Y +G + ++ LFR M+ + +P+ S ++AC
Sbjct: 356 SDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC 415
Query: 546 SHSGMVGEGSRLFHMMCR---ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP---- 598
++G+V G ++ + R FV + ++D+ +++G++ A +++
Sbjct: 416 ENAGLVPLGKQIHGHVIRTDVSDEFVQN-----SLIDMYSKSGSVDSASTVFNQIKHRSV 470
Query: 599 ----------VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQAC 638
Q G SV L HS E+ EV ++ QAC
Sbjct: 471 VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI-----QAC 515
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 348 bits (892), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 333/637 (52%), Gaps = 13/637 (2%)
Query: 51 HASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLH 106
+ ++ GF D L+ +Y+ G L AR++FD +P +L S+ +++ Y + +
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 107 SDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNG- 165
+ + YH + + D S VL A L V Q LH +KSG + V+N
Sbjct: 189 EEALEIYHELKNSW-IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 166 LVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGN 225
LV Y K AR+VFDE+ R+ VS+ +M Y++ + E +R+F + F +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-KPD 306
Query: 226 DFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFD 285
TV S++ AC L L K+++ Y++K+G + S + L+++Y KCGD+ AR VF+
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 286 EMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXX 345
M D VSW ++I GY Q G ++A++LF +
Sbjct: 367 SMECKD----TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 346 XXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFIS 405
G LH +K G+ + V NALIDMYAKC V D+ +F + D V+WN+ IS
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 406 GCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLV 465
C + G L++ +MR +S PD T + L CASL A LG IH L+ G
Sbjct: 483 ACVRFGDFATGLQVTTQMR-KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYE 541
Query: 466 SCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRD 525
S + +G AL+ Y+KCG +++ VF+ M ++ VTW+ MI YGM G+G ++ F D
Sbjct: 542 S-ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 526 MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAG 585
M K P+ VVF +++ ACSHSG+V EG F M P ++HYAC+VDLL+R+
Sbjct: 601 MEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQ 660
Query: 586 NLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSN 645
+ +A +FI MP++P S++ + L C + E E RR++EL+PD Y +L SN
Sbjct: 661 KISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASN 720
Query: 646 LYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLN 682
YA+ +W V +R+ +K + + K PG S +E+ N
Sbjct: 721 AYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKN 757
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 248/514 (48%), Gaps = 13/514 (2%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIA-ER 189
+ +A S ++ + R+H VI G S F L+D YS S+ VF ++ +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
NV W S+ A+ +N E L + ++RE V + +T S++ AC L G V+
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
++ G + F+ +L++MY + G + AR+VFDEM DLVSW ++I GYS
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNSLISGYSSH 185
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
G+ +ALE++ + + I+P+ G LHG +K G+ V
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 370 NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS 429
N L+ MY K +DAR VF+ +D VS+N+ I G + E++ MF + +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQF 303
Query: 430 PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSAR 489
PD +TV VL AC L L L I+ + LK G V S V L++ YAKCGD +AR
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITAR 362
Query: 490 MVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSG 549
VF+ M K+ V+W+++ISGY GD + ++ LF+ M+ E + + + + +++ +
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAY 609
+ G L H + + ++D+ A+ G + ++L M V+ +
Sbjct: 423 DLKFGKGL-HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTV 480
Query: 610 LHGCGLHSEFELG-EVAIR-RMLELHPDQACYYV 641
+ C +F G +V + R E+ PD A + V
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLV 514
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 204/645 (31%), Positives = 343/645 (53%), Gaps = 17/645 (2%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
++ H I GF D T L+ Y + R++FD + N+ ++ ++ Y N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-V 162
+++ +V++ + + G + F+ L +E + ++H V+K+G V
Sbjct: 173 SMNDEVLTLF-MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
N L++ Y KCG+V AR +FD+ ++VV+W SM Y N +E L +F MR +V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
++ + S++ C L L + +H VVK G + + T+L+ Y KC + DA +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
+F E+ + +VSWTAMI G+ Q +A++LF++ G+ PN
Sbjct: 352 LFKEIGCVGN---VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
+H VVK ++ V AL+D Y K V +A VF KD+V+W++
Sbjct: 409 VISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA-LPLGSSIHAFALK 461
++G AQ+G A++MF + ++ P+ T +L+ CA+ A + G H FA+K
Sbjct: 465 MLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 462 DGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIA 521
L S S+ V +ALL YAK G+ +SA VF EK+ V+W++MISGY G + ++
Sbjct: 524 SRLDS-SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 582
Query: 522 LFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLL 581
+F++M K + + + V F V AAC+H+G+V EG + F +M R+ P+ +H +CMVDL
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642
Query: 582 ARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYV 641
+RAG L++A+ I+ MP G +++ L C +H + ELG +A +++ + P+ + YV
Sbjct: 643 SRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYV 702
Query: 642 LVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYS 686
L+SN+YA G W +VR+++ +R + K PG S +E+ N TYS
Sbjct: 703 LLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK-NKTYS 746
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/564 (30%), Positives = 273/564 (48%), Gaps = 23/564 (4%)
Query: 75 LRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLK 134
L +A LFD P + S+ ++L + F + + L + LG D +FS VLK
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLL-FGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 135 ACSELRDVVQAARLHCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARKVFDEIAERNVVS 193
+ L D + +LHC IK G D V LVD Y K + RKVFDE+ ERNVV+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 194 WTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVV 253
WT++ Y +N E L LF RM+ N FT + + + G +G VH VV
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 254 KSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPL 313
K+G+ ++ SL+N+Y+KCG++ AR +FD+ +V+W +MI GY+ G L
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK----SVVTWNSMISGYAANGLDL 277
Query: 314 KALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALI 373
+AL +F + + LH VVK G + +R AL+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 374 DMYAKCHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPD 432
Y+KC + DA +F E +VVSW + ISG Q+ EA+++F M+ + P +
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 433 AVTVVGVLSACASLGALPL--GSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
+ L ALP+ S +HA +K S VGTALL+ Y K G + A
Sbjct: 398 -------FTYSVILTALPVISPSEVHAQVVKTNYERSST-VGTALLDAYVKLGKVEEAAK 449
Query: 491 VFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGM 550
VF G+ +K+ V WSAM++GY G+ +I +F ++ K +PNE F+S+L C+ +
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 551 -VGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS----V 605
+G+G + FH + S+ + ++ + A+ GN++ A + + + VS +
Sbjct: 510 SMGQGKQ-FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 606 FGAYLHGCGLHSEFELGEVAIRRM 629
G HG + + E+ R++
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKV 592
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 354/648 (54%), Gaps = 26/648 (4%)
Query: 48 KKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLP---SPNLHSFKAMLRWY 100
K HA LI D+ L+SLY+ G A +F+ + ++ S+ AM+ Y
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 101 FLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHC-HVIKSG--P 157
N D + + + LG + ++ V++ACS D V R+ ++K+G
Sbjct: 142 GNNGRELDAIKVF-VEFLELGLVPNDYCYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFE 199
Query: 158 SDGFVLNGLVDAYSKCGH-VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNR 216
SD V L+D + K + +A KVFD+++E NVV+WT M +Q E +R F
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 217 MREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC-- 274
M + + FT+ S+ +AC +L +L GK +H + ++SG+ + + SL++MY KC
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSA 317
Query: 275 -GDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH-PLKALELFTDRNWAG-ILPNX 331
G + D RKVFD M ++ ++SWTA+I GY + + +A+ LF++ G + PN
Sbjct: 318 DGSVDDCRKVFDRM----EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNH 373
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFET 391
+G + G K GL N+ V N++I M+ K + DA+ FE+
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFES 433
Query: 392 TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPL 451
+K++VS+N+F+ G ++ + +A ++ + A T +LS A++G++
Sbjct: 434 LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS-AFTFASLLSGVANVGSIRK 492
Query: 452 GSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYG 511
G IH+ +K GL SC+ V AL++ Y+KCG +A VF+ M +N ++W++MI+G+
Sbjct: 493 GEQIHSQVVKLGL-SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 512 MQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSM 571
G + + F M++E +PNEV + ++L+ACSH G+V EG R F+ M + P M
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 572 KHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE 631
+HYACMVDLL RAG L +A +FI+ MP Q V V+ +L C +HS ELG++A R++LE
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE 671
Query: 632 LHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
L P++ Y+ +SN+YA G+W ++R +K+R L K GCS +E+
Sbjct: 672 LDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 173/348 (49%), Gaps = 14/348 (4%)
Query: 207 AVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATS 266
AV L L R+G + T SL+ +C + GK VH +++ I +S L S
Sbjct: 45 AVSALDLM--ARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 267 LLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG 326
L+++Y K GD A VF E + + D+VSW+AM+ Y G L A+++F + G
Sbjct: 103 LISLYSKSGDSAKAEDVF-ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 327 ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD-NTPVRNALIDMYAKC-HLVSD 384
++PN +G + G ++K G F+ + V +LIDM+ K + +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 385 ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
A VF+ + +VV+W I+ C Q G EA+ F M F D T+ V SACA
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE-SDKFTLSSVFSACA 280
Query: 445 SLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKC---GDAKSARMVFDGMGEKNAV 501
L L LG +H++A++ GLV V +L++ YAKC G R VFD M + + +
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVD---DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 502 TWSAMISGYGMQGD-GVGSIALFRDMLKE-ECEPNEVVFTSVLAACSH 547
+W+A+I+GY + +I LF +M+ + EPN F+S AC +
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
+G A+ M + P D+VT +L +C LG +HA ++ + S
Sbjct: 38 NAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS 97
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGM---GEKNAVTWSAMISGYGMQGDGVGSIALFRD 525
+ + L++ Y+K GD+ A VF+ M G+++ V+WSAM++ YG G + +I +F +
Sbjct: 98 VLYNS-LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 526 MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAG 585
L+ PN+ +T+V+ ACS+S VG G + + +F + ++D+ +
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 586 N-LKEALDFIDKM 597
N + A DKM
Sbjct: 217 NSFENAYKVFDKM 229
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 212/651 (32%), Positives = 340/651 (52%), Gaps = 20/651 (3%)
Query: 40 ICKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKA 95
I N+D HA I G + + L+S+Y+ + A ++F+ L N + A
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA 398
Query: 96 MLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKS 155
M+R Y N V+ + + + G+ D F+ +L C+ D+ ++ H +IK
Sbjct: 399 MIRGYAHNGESHKVMELF-MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 156 GPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLF 214
+ FV N LVD Y+KCG + AR++F+ + +R+ V+W ++ +YVQ++ E LF
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 215 NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC 274
RM + + + S + ACT + L+QGK VH VK G+ + +SL++MY KC
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 275 GDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXX 334
G I DARKVF +S E +VS A+I GYSQ +A+ LF + G+ P+
Sbjct: 578 GIIKDARKVF----SSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITF 632
Query: 335 XXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRN-ALIDMYAKCHLVSDARYVF-ETT 392
+G HG + K G +L+ MY +++A +F E +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 393 VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
K +V W +SG +Q+G EAL+ ++ MR + PD T V VL C+ L +L G
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV-LPDQATFVTVLRVCSVLSSLREG 751
Query: 453 SSIHA--FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAMISG 509
+IH+ F L L + L++ YAKCGD K + VFD M + N V+W+++I+G
Sbjct: 752 RAIHSLIFHLAHDLDELT---SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Query: 510 YGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVP 569
Y G ++ +F M + P+E+ F VL ACSH+G V +G ++F MM +
Sbjct: 809 YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEA 868
Query: 570 SMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRM 629
+ H ACMVDLL R G L+EA DFI+ ++P ++ + L C +H + GE++ ++
Sbjct: 869 RVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKL 928
Query: 630 LELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+EL P + YVL+SN+YAS G W +R++++ RG+ KVPG S ++++
Sbjct: 929 IELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVE 979
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 169/655 (25%), Positives = 290/655 (44%), Gaps = 58/655 (8%)
Query: 1 MLVAPCSLFHSSKSLIQFRSLSSYIAFTLPHPPTLYLSPICK--NIDTVKKFHASLIVHG 58
ML S+ K L F SL F ++ LS + N++ ++ H S+I G
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 59 FPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYH 114
++ L+ +YA + ARR+F+ + PN + + Y L + V +
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 115 LTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCG 174
R G D + F V ++ Y + G
Sbjct: 251 RMRDE-GHRPDHLAFVTV----------------------------------INTYIRLG 275
Query: 175 HVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVT 234
+ AR +F E++ +VV+W M + + C + F MR+ V T+GS+++
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
A + +L G VH +K G+ N ++ +SL++MY KC + A KVF+ + +D
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND-- 393
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
V W AMI GY+ G K +ELF D +G + MG H
Sbjct: 394 --VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFH 451
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
+++K L N V NAL+DMYAKC + DAR +FE +D V+WN+ I Q +
Sbjct: 452 SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES 511
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTA 474
EA ++F+RM D + L AC + L G +H ++K GL ++ G++
Sbjct: 512 EAFDLFKRMNLCGI-VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL-DRDLHTGSS 569
Query: 475 LLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPN 534
L++ Y+KCG K AR VF + E + V+ +A+I+GY Q + ++ LF++ML P+
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPS 628
Query: 535 EVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYA-CMVDLLARAGNLKEALDF 593
E+ F +++ AC + G++ FH + F ++ ++ + + + EA
Sbjct: 629 EITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACAL 687
Query: 594 IDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELH-----PDQACYYVLV 643
++ + ++ + G HS+ E A++ E+ PDQA + ++
Sbjct: 688 FSELSSPKSIVLWTGMMSG---HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 262/568 (46%), Gaps = 59/568 (10%)
Query: 48 KKFHASLIVHGFPGDTKL----LSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K H+ ++ G + +L + LYA + +A + FD L K + W +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-------KDVTAWNSML 132
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLV-----VFSIVLKACSELRDVVQAARLHCHVIKSG-P 157
+++S + + R + F + + FSIVL C+ +V ++HC +IK G
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 158 SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM 217
+ + LVD Y+KC + AR+VF+ I + N V WT +F YV+ E + +F RM
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 218 REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDI 277
R+ G + +++N Y++ G +
Sbjct: 253 RD-----------------------------------EGHRPDHLAFVTVINTYIRLGKL 277
Query: 278 GDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXX 337
DAR +F EM + D+V+W MI G+ +RG A+E F + + +
Sbjct: 278 KDARLLFGEMSSP----DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDV 397
+G+++H +K GL N V ++L+ MY+KC + A VFE +K+
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA 457
V WN+ I G A +G +++ +E+F M+S ++ D T +LS CA+ L +GS H+
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD-FTFTSLLSTCAASHDLEMGSQFHS 452
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
+K L +++VG AL++ YAKCG + AR +F+ M +++ VTW+ +I Y +
Sbjct: 453 IIIKKKLAK-NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES 511
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM 577
+ LF+ M + S L AC+H + +G ++ H + + + + +
Sbjct: 512 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSL 570
Query: 578 VDLLARAGNLKEALDFIDKMPVQPGVSV 605
+D+ ++ G +K+A +P VS+
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 257/544 (47%), Gaps = 64/544 (11%)
Query: 158 SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM 217
S+G + N +VD Y+KC V A K FD E++V +W SM Y + LR F +
Sbjct: 93 SEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSL 151
Query: 218 REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDI 277
E + N FT +++ C + ++ G+ +H ++K G+ NS+ +L++MY KC I
Sbjct: 152 FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRI 211
Query: 278 GDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXX 337
DAR+VF+ ++ + + V WT + GY + G P +A+ +F G P+
Sbjct: 212 SDARRVFEWIV----DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV-- 265
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDV 397
+I+ Y + + DAR +F DV
Sbjct: 266 ---------------------------------TVINTYIRLGKLKDARLLFGEMSSPDV 292
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA 457
V+WN ISG + G A+E F MR S + T+ VLSA + L LG +HA
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS-TLGSVLSAIGIVANLDLGLVVHA 351
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
A+K GL S +IYVG++L++ Y+KC ++A VF+ + EKN V W+AMI GY G+
Sbjct: 352 EAIKLGLAS-NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESH 410
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM 577
+ LF DM ++ FTS+L+ C+ S + GS+ FH + + ++ +
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNAL 469
Query: 578 VDLLARAGNLKEALDFIDKMPVQPGV---SVFGAYLHGCGLHSEFELGEVAIRRM--LEL 632
VD+ A+ G L++A ++M + V ++ G+Y+ F+L +RM +
Sbjct: 470 VDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL----FKRMNLCGI 525
Query: 633 HPDQACYYVLVSNLYASDGRWGMV--KQVREMIKQRGLNKV--PGCSLVEIDLNDTYSKV 688
D AC L S L A G+ KQV + + GL++ G SL+ D YSK
Sbjct: 526 VSDGAC---LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI-----DMYSKC 577
Query: 689 TIFP 692
I
Sbjct: 578 GIIK 581
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 129/304 (42%), Gaps = 42/304 (13%)
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
+L GK VH + GI L +++++Y KC + A K FD + E D+ +W
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-----EKDVTAWN 129
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
+M+ YS G P K L F I PN G +H ++K
Sbjct: 130 SMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
GL N+ AL+DMYAKC +SDAR VFE V + V W SG ++G EA+ +F
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+RMR E PD + V V +N Y
Sbjct: 250 ERMRDEGHR-PDHLAFVTV------------------------------------INTYI 272
Query: 481 KCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
+ G K AR++F M + V W+ MISG+G +G +I F +M K + S
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 541 VLAA 544
VL+A
Sbjct: 333 VLSA 336
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 19/317 (5%)
Query: 349 MGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCA 408
+G +H + G+ + NA++D+YAKC VS A F+ ++KDV +WNS +S +
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF-LEKDVTAWNSMLSMYS 136
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
G + L F + E+ P+ T VLS CA + G IH +K GL S
Sbjct: 137 SIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
Y G AL++ YAKC AR VF+ + + N V W+ + SGY G ++ +F M
Sbjct: 196 -YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
E P+ + F +V+ G + + LF M P + + M+ + G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCET 309
Query: 589 EALDF---IDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSN 645
A+++ + K V+ S G+ L G+ + +LG V ++L L SN
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LASN 361
Query: 646 LYASDGRWGMVKQVREM 662
+Y M + +M
Sbjct: 362 IYVGSSLVSMYSKCEKM 378
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 338 bits (867), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 206/640 (32%), Positives = 340/640 (53%), Gaps = 15/640 (2%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSP-NLHSFKAMLRWYFL 102
K+ H ++ + D T L+ +Y FG A R+F + N+ + M+ +
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGF 161
+ + + Y L + F+ L ACS+ + ++HC V+K G +D +
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVS-TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
V L+ YSKCG V A VF + ++ + W +M AY +ND L LF MR+
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS 368
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR 281
V + FT+ ++++ C+ LG + GK VH + K I S + ++LL +Y KCG DA
Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD--RNWAGILPNXXXXXXXXX 339
VF M +E D+V+W ++I G + G +AL++F D + + P+
Sbjct: 429 LVFKSM----EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS 399
G+ +HG ++K GL N V ++LID+Y+KC L A VF + +++V+
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA 459
WNS IS +++ ++++F M S+ P D+V++ VL A +S +L G S+H +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFP-DSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGS 519
L+ G+ S ++ AL++ Y KCG +K A +F M K+ +TW+ MI GYG GD + +
Sbjct: 604 LRLGIPS-DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITA 662
Query: 520 IALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
++LF +M K P++V F S+++AC+HSG V EG +F M ++ P+M+HYA MVD
Sbjct: 663 LSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVD 722
Query: 580 LLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACY 639
LL RAG L+EA FI MP++ S++ L H ELG ++ ++L + P++
Sbjct: 723 LLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGST 782
Query: 640 YVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
YV + NLY G ++ ++K++GL+K PGCS +E+
Sbjct: 783 YVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 822
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 174/605 (28%), Positives = 296/605 (48%), Gaps = 28/605 (4%)
Query: 32 PPTLYLSPICKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFD---- 83
P L N+ K H S++V G+ D T L+++Y GFL +A ++FD
Sbjct: 64 PSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQ 123
Query: 84 ---HLPSPNLHSFKAMLRWYF-LNNLHSDVVSFYHLTRYTL--GFFHDLVVFSIVLKACS 137
+ + ++ + +M+ YF V F + + + F +V S++ K +
Sbjct: 124 SQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGN 183
Query: 138 ELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER-NVVSWT 195
R+ + ++H ++++ +D F+ L+D Y K G A +VF EI ++ NVV W
Sbjct: 184 FRRE--EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 196 SMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS 255
M V + + L L+ + V + + AC++ + G+ +H VVK
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 256 GIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKA 315
G+H + ++ TSLL+MY KCG +G+A VF ++ D L++ W AM+ Y++ + A
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV--DKRLEI--WNAMVAAYAENDYGYSA 357
Query: 316 LELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDM 375
L+LF +LP+ G +H + K + + + +AL+ +
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 376 YAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS-PPDAV 434
Y+KC DA VF++ +KD+V+W S ISG ++G EAL++F M+ + S PD+
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 435 TVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDG 494
+ V +ACA L AL G +H +K GLV +++VG++L++ Y+KCG + A VF
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKTGLV-LNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 495 MGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
M +N V W++MIS Y SI LF ML + P+ V TSVL A S + + +G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 555 SRLFHMMCRELNFVPSMKHYA-CMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGC 613
L H L +PS H ++D+ + G K A + KM + ++ + ++G
Sbjct: 597 KSL-HGYTLRLG-IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT-WNLMIYGY 653
Query: 614 GLHSE 618
G H +
Sbjct: 654 GSHGD 658
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 247/495 (49%), Gaps = 18/495 (3%)
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSAR 180
F+ + F +LKACS L ++ +H V+ G D F+ LV+ Y KCG + A
Sbjct: 56 FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAV 115
Query: 181 KVFD-------EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
+VFD ++ R+V W SM Y + EG+ F RM V + F++ +V
Sbjct: 116 QVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV 175
Query: 234 TACTKLGSL--HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
+ K G+ +GK +HG+++++ + +SFL T+L++MY K G DA +VF E+ +
Sbjct: 176 SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEI---E 232
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM 351
D+ ++V W MIVG+ G +L+L+ + G
Sbjct: 233 DKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGR 292
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG 411
+H VVK GL ++ V +L+ MY+KC +V +A VF V K + WN+ ++ A++
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYV 471
Y AL++F MR +S PD+ T+ V+S C+ LG G S+HA K + S S +
Sbjct: 353 YGYSALDLFGFMRQKSV-LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST-I 410
Query: 472 GTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE- 530
+ALL Y+KCG A +VF M EK+ V W ++ISG G ++ +F DM ++
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 531 -CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKE 589
+P+ + TSV AC+ + G ++ M + V ++ + ++DL ++ G +
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 590 ALDFIDKMPVQPGVS 604
AL M + V+
Sbjct: 530 ALKVFTSMSTENMVA 544
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Query: 399 SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAF 458
S NS I Q G +AL ++ + S T +L AC++L L G +IH
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 459 ALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE-------KNAVTWSAMISGYG 511
+ G ++ T+L+N Y KCG A VFDG + ++ W++MI GY
Sbjct: 86 VVVLGW-RYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 512 MQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMV--GEGSRLFHMMCR 563
+ FR ML P+ + V++ G EG ++ M R
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 304/554 (54%), Gaps = 19/554 (3%)
Query: 133 LKACSELRDVVQAARLHCHVIKSGPSDGFVLNG------LVDAYSKCGHVCSARKVFDEI 186
L++ S+L+ + ++H VI S G +LNG L+ + + G + ARKVFDE+
Sbjct: 23 LQSISKLKRHI--TQIHAFVI----STGNLLNGSSISRDLIASCGRIGEISYARKVFDEL 76
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
+R V + SM V Y + E LRL+++M + + T + AC L +G+
Sbjct: 77 PQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGE 136
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
V V G + F+ +S+LN+Y+KCG + +A +F +M D ++ WT M+ G+
Sbjct: 137 AVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRD----VICWTTMVTGF 192
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
+Q G LKA+E + + G + MG +HG + + GL N
Sbjct: 193 AQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNV 252
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
V +L+DMYAK + A VF + K VSW S ISG AQ+G A +A E M+S
Sbjct: 253 VVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSL 312
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
F P D VT+VGVL AC+ +G+L G +H + LK ++ TAL++ Y+KCG
Sbjct: 313 GFQP-DLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD--RVTATALMDMYSKCGALS 369
Query: 487 SARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
S+R +F+ +G K+ V W+ MIS YG+ G+G ++LF M + EP+ F S+L+A S
Sbjct: 370 SSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALS 429
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
HSG+V +G F +M + PS KHY C++DLLARAG ++EALD I+ + + ++
Sbjct: 430 HSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIW 489
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQR 666
A L GC H +G++A ++L+L+PD LVSN +A+ +W V +VR++++
Sbjct: 490 VALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNG 549
Query: 667 GLNKVPGCSLVEID 680
+ KVPG S +E++
Sbjct: 550 AMEKVPGYSAIEVN 563
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 231/492 (46%), Gaps = 19/492 (3%)
Query: 28 TLPHPPTL-YLSPICKNIDTVKKFHASLIVHG--FPGDTKLLSLYAS---FGFLRHARRL 81
TL P + +L I K + + HA +I G G + L AS G + +AR++
Sbjct: 13 TLLCPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKV 72
Query: 82 FDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRD 141
FD LP + + +M+ Y +V+ Y D F++ +KAC
Sbjct: 73 FDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYD-QMIAEKIQPDSSTFTMTIKACLSGLV 131
Query: 142 VVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVA 200
+ + + C + G +D FV + +++ Y KCG + A +F ++A+R+V+ WT+M
Sbjct: 132 LEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTG 191
Query: 201 YVQNDCAVEGLRLFNRMR-EGFVDGNDFTVG-SLVTACTKLGSLHQGKWVHGYVVKSGIH 258
+ Q +++ + + M+ EGF G D V L+ A LG G+ VHGY+ ++G+
Sbjct: 192 FAQAGKSLKAVEFYREMQNEGF--GRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLP 249
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
+N + TSL++MY K G I A +VF M+ VSW ++I G++Q G KA E
Sbjct: 250 MNVVVETSLVDMYAKVGFIEVASRVFSRMMFK----TAVSWGSLISGFAQNGLANKAFEA 305
Query: 319 FTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAK 378
+ G P+ G L+H ++K + D AL+DMY+K
Sbjct: 306 VVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TALMDMYSK 364
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
C +S +R +FE +KD+V WN+ IS G+ E + +F +M +ES PD T
Sbjct: 365 CGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKM-TESNIEPDHATFAS 423
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK 498
+LSA + G + G + + + S L++ A+ G + A + +
Sbjct: 424 LLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLD 483
Query: 499 NAV-TWSAMISG 509
NA+ W A++SG
Sbjct: 484 NALPIWVALLSG 495
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 196/556 (35%), Positives = 309/556 (55%), Gaps = 16/556 (2%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIA--E 188
+L S+ + + ++H VI G D VL + L +AY + + A F+ I +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 189 RNVVSWTSMFVAYVQND--CAVEGLRLFNRMREGFVDGND-FTVGSLVTACTKLGSLHQG 245
RN SW ++ Y ++ C + L L+NRMR DG D F + + AC LG L G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR-HCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
+HG +K+G+ + ++A SL+ MY + G + A+KVFDE+ + L W ++ G
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL----WGVLMKG 184
Query: 306 YSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDN 365
Y + + LF G+ + +G +HG+ ++ D
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 366 TP-VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
+ ++ ++IDMY KC L+ +AR +FET+V ++VV W + ISG A+ A EA ++F++M
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
ES P+ T+ +L +C+SLG+L G S+H + +++G+ ++ T+ ++ YA+CG+
Sbjct: 305 RESI-LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF-TSFIDMYARCGN 362
Query: 485 AKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAA 544
+ AR VFD M E+N ++WS+MI+ +G+ G ++ F M + PN V F S+L+A
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 545 CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
CSHSG V EG + F M R+ VP +HYACMVDLL RAG + EA FID MPV+P S
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 605 VFGAYLHGCGLHSEFEL-GEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMI 663
+GA L C +H E +L GE+A ++L + P+++ YVL+SN+YA G W MV VR +
Sbjct: 483 AWGALLSACRIHKEVDLAGEIA-EKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKM 541
Query: 664 KQRGLNKVPGCSLVEI 679
+G K G S E+
Sbjct: 542 GIKGYRKHVGQSATEV 557
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 252/509 (49%), Gaps = 23/509 (4%)
Query: 42 KNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLP--SPNLHSFKA 95
K ++ ++ HA +I+HGF + + L + Y L A F+ +P N HS+
Sbjct: 18 KTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 96 MLRWYFLNNL--HSDVVSFYH-LTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHV 152
+L Y + +SDV+ Y+ + R+ G +VF+I KAC L + +H
Sbjct: 78 ILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAI--KACVGLGLLENGILIHGLA 135
Query: 153 IKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
+K+G D +V LV+ Y++ G + SA+KVFDEI RN V W + Y++ E
Sbjct: 136 MKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVF 195
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVV-KSGIHVNSFLATSLLNM 270
RLF MR+ + + T+ LV AC + + GK VHG + +S I + +L S+++M
Sbjct: 196 RLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM 255
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
YVKC + +ARK+F+ TS D ++V WT +I G+++ ++A +LF ILPN
Sbjct: 256 YVKCRLLDNARKLFE---TSVDR-NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPN 311
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE 390
G +HG +++ G+ + + IDMYA+C + AR VF+
Sbjct: 312 QCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 391 TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALP 450
+++V+SW+S I+ +G EAL+ F +M+S++ P++VT V +LSAC+ G +
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNV-VPNSVTFVSLLSACSHSGNVK 430
Query: 451 LGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN-AVTWSAMISG 509
G +D V +++ + G+ A+ D M K A W A++S
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
Query: 510 YGM--QGDGVGSIALFRDMLKEECEPNEV 536
+ + D G IA +L E E + V
Sbjct: 491 CRIHKEVDLAGEIA--EKLLSMEPEKSSV 517
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 314/615 (51%), Gaps = 12/615 (1%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
LL+ Y GF + A LFD +P N SF + + Y D + Y + G
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRL-HREGHEL 144
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVF 183
+ VF+ LK L LH ++K G S+ FV L++AYS CG V SAR VF
Sbjct: 145 NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVF 204
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
+ I +++V W + YV+N + L+L + MR N++T + + A LG+
Sbjct: 205 EGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
K VHG ++K+ ++ + LL +Y + GD+ DA KVF+EM +D +V W+ MI
Sbjct: 265 FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKND----VVPWSFMI 320
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
+ Q G +A++LF A ++PN +G LHGLVVK G
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
+ V NALID+YAKC + A +F K+ VSWN+ I G G +A MF+
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
S + VT L ACASL ++ LG +H A+K + V +L++ YAKCG
Sbjct: 441 LRNQVSVTE-VTFSSALGACASLASMDLGVQVHGLAIKTNNAK-KVAVSNSLIDMYAKCG 498
Query: 484 DAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLA 543
D K A+ VF+ M + +W+A+ISGY G G ++ + M +C+PN + F VL+
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 544 ACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV 603
CS++G++ +G F M R+ P ++HY CMV LL R+G L +A+ I+ +P +P V
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSV 618
Query: 604 SVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMI 663
++ A L + E + +L+++P YVLVSN+YA +W V +R+ +
Sbjct: 619 MIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSM 678
Query: 664 KQRGLNKVPGCSLVE 678
K+ G+ K PG S +E
Sbjct: 679 KEMGVKKEPGLSWIE 693
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 249/512 (48%), Gaps = 19/512 (3%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIA 187
+ +L+ C + D + A +HC ++K G D F N L++AY K G A +FDE+
Sbjct: 52 YGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGK 246
ERN VS+ ++ Y D + L++R+ REG + N S + L
Sbjct: 112 ERNNVSFVTLAQGYACQD----PIGLYSRLHREGH-ELNPHVFTSFLKLFVSLDKAEICP 166
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
W+H +VK G N+F+ +L+N Y CG + AR VF+ +L D+V W ++ Y
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK----DIVVWAGIVSCY 222
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
+ G+ +L+L + AG +PN +HG ++K +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
V L+ +Y + +SDA VF + DVV W+ I+ Q+G EA+++F RMR E
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR-E 341
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
+F P+ T+ +L+ CA LG +H +K G IYV AL++ YAKC
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF-DLDIYVSNALIDVYAKCEKMD 400
Query: 487 SARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
+A +F + KN V+W+ +I GY G+G + ++FR+ L+ + EV F+S L AC+
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
+ G ++ H + + N + ++D+ A+ G++K A ++M V+ +
Sbjct: 461 SLASMDLGVQV-HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASW 518
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLELHPDQAC 638
A + G H LG A+ R+L++ D+ C
Sbjct: 519 NALISGYSTHG---LGRQAL-RILDIMKDRDC 546
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 340/657 (51%), Gaps = 17/657 (2%)
Query: 32 PPTLYLSPICKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPS 87
P L ++I + + H+ L+ G+ L+S+YA L ARRLFD
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 88 P-NLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
+ + ++L Y + + + + T + + S L AC
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVS-ALTACDGFSYAKLGK 304
Query: 147 RLHCHVIKSGP--SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQN 204
+H V+KS S+ +V N L+ Y++CG + A ++ ++ +VV+W S+ YVQN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 205 DCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA 264
E L F+ M ++ ++ S++ A +L +L G +H YV+K G N +
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
+L++MY KC + F M + DL+SWT +I GY+Q ++ALELF D
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRM----HDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
+ + + +H +++ GL D T ++N L+D+Y KC +
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGY 539
Query: 385 ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
A VFE+ KDVVSW S IS A +G+ EA+E+F+RM S D+V ++ +LSA A
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA-DSVALLCILSAAA 598
Query: 445 SLGALPLGSSIHAFALKDGL-VSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTW 503
SL AL G IH + L+ G + SI V A+++ YA CGD +SA+ VFD + K + +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 504 SAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
++MI+ YGM G G ++ LF M E P+ + F ++L ACSH+G++ EG +M
Sbjct: 657 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 716
Query: 564 ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
E P +HY C+VD+L RA + EA +F+ M +P V+ A L C HSE E+GE
Sbjct: 717 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 776
Query: 624 VAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+A +R+LEL P VLVSN++A GRW V++VR +K G+ K PGCS +E+D
Sbjct: 777 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 274/558 (49%), Gaps = 16/558 (2%)
Query: 64 KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFF 123
KL+ +Y G L A ++FD +P ++ M+ Y N + ++ Y R G
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE-GVP 179
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKV 182
L F +LKAC++LRD+ + LH ++K G S GF++N LV Y+K + +AR++
Sbjct: 180 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 183 FDEIAER-NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
FD E+ + V W S+ +Y + ++E L LF M N +T+ S +TAC
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 242 LHQGKWVHGYVVKSGIHVNS-FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
GK +H V+KS H + ++ +L+ MY +CG + A ++ +M + D+V+W
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM----NNADVVTWN 355
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
++I GY Q +ALE F+D AG + GM LH V+K
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
G N V N LIDMY+KC+L F KD++SW + I+G AQ+ EALE+F
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+ + + D + + +L A + L ++ + IH L+ GL+ I L++ Y
Sbjct: 476 RDVAKKRME-IDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ--NELVDVYG 532
Query: 481 KCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
KC + A VF+ + K+ V+W++MIS + G+ ++ LFR M++ + V
Sbjct: 533 KCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLC 592
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA---LDFIDKM 597
+L+A + + +G + + R+ F +VD+ A G+L+ A D I++
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 651
Query: 598 PVQPGVSVFGAY-LHGCG 614
+ S+ AY +HGCG
Sbjct: 652 GLLQYTSMINAYGMHGCG 669
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 208/421 (49%), Gaps = 8/421 (1%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPS--DGFVLNGLVDAYSKCGHVCSARKVFDEI 186
F+ VL+ C + R V Q +LH + K+ PS F+ LV Y KCG + A KVFDE+
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
+R +W +M AYV N L L+ MR V + +L+ AC KL + G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+H +VK G H F+ +L++MY K D+ AR++FD ++ D V W +++ Y
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF---QEKGDAVLWNSILSSY 259
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
S G L+ LELF + + G PN +G +H V+K +
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 367 P-VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
V NALI MY +C + A + DVV+WNS I G Q+ EALE F M +
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
D V++ +++A L L G +HA+ +K G S ++ VG L++ Y+KC
Sbjct: 380 AGHK-SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS-NLQVGNTLIDMYSKCNLT 437
Query: 486 KSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAAC 545
F M +K+ ++W+ +I+GY V ++ LFRD+ K+ E +E++ S+L A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 546 S 546
S
Sbjct: 498 S 498
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 5/235 (2%)
Query: 418 EMFQRMR-SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
E FQR+ SE+ SP +A V L C A+ G +H+ K ++ L+
Sbjct: 66 EAFQRLDVSENNSPVEAFAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLV 123
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
Y KCG A VFD M ++ A W+ MI Y G+ ++AL+ +M E
Sbjct: 124 FMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS 183
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
F ++L AC+ + GS L H + +L + + +V + A+ +L A D
Sbjct: 184 SFPALLKACAKLRDIRSGSEL-HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 597 MPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDG 651
+ ++ + L + L + + R + + Y +VS L A DG
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTACDG 296
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 200/640 (31%), Positives = 325/640 (50%), Gaps = 32/640 (5%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFY-HLTRYTLG 121
+ LL +YA + R+F +P N S+ A++ NNL S + F+ + + G
Sbjct: 219 SALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 278
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSAR 180
+++ VL++C+ L ++ +LH H +KS +DG V +D Y+KC ++ A+
Sbjct: 279 VSQS--IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
+FD N S+ +M Y Q + + L LF+R+ + ++ ++ + AC +
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
L +G ++G +KS + ++ +A + ++MY KC + +A +VFDEM D VSW
Sbjct: 397 GLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD----AVSWN 452
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
A+I + Q G + L LF + I P+ GM +H +VK
Sbjct: 453 AIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY-GMEIHSSIVKS 511
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVF--------------------ETTVQKDVVSW 400
G+ N+ V +LIDMY+KC ++ +A + +Q+ VSW
Sbjct: 512 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSW 571
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFAL 460
NS ISG + +A +F RM +P D T VL CA+L + LG IHA +
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITP-DKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 461 KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSI 520
K L S +Y+ + L++ Y+KCGD +R++F+ ++ VTW+AMI GY G G +I
Sbjct: 631 KKELQS-DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 689
Query: 521 ALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDL 580
LF M+ E +PN V F S+L AC+H G++ +G F+MM R+ P + HY+ MVD+
Sbjct: 690 QLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDI 749
Query: 581 LARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH-SEFELGEVAIRRMLELHPDQACY 639
L ++G +K AL+ I +MP + ++ L C +H + E+ E A +L L P +
Sbjct: 750 LGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSA 809
Query: 640 YVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
Y L+SN+YA G W V +R ++ L K PGCS VE+
Sbjct: 810 YTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 849
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 170/639 (26%), Positives = 295/639 (46%), Gaps = 41/639 (6%)
Query: 31 HPPTLYLSPICKNIDTVKKF-HASLIVHGFP-----GDTKLLSLYASFGFLRHARRLFDH 84
P T L+ + + + F AS++ P K+++ Y+ + A F+
Sbjct: 80 RPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNM 139
Query: 85 LPSPNLHSFKAMLRWYFLNNLH-SDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVV 143
+P ++ S+ +ML Y N + F + R + F D F+I+LK CS L D
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF--DGRTFAIILKVCSFLEDTS 197
Query: 144 QAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYV 202
++H V++ G +D + L+D Y+K + +VF I E+N VSW+++ V
Sbjct: 198 LGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 257
Query: 203 QNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF 262
QN+ L+ F M++ + S++ +C L L G +H + +KS +
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 317
Query: 263 LATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR 322
+ T+ L+MY KC ++ DA+ +FD + + L+ S+ AMI GYSQ H KAL LF
Sbjct: 318 VRTATLDMYAKCDNMQDAQILFD----NSENLNRQSYNAMITGYSQEEHGFKALLLFHRL 373
Query: 323 NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLV 382
+G+ + G+ ++GL +K L + V NA IDMY KC +
Sbjct: 374 MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 383 SDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSA 442
++A VF+ ++D VSWN+ I+ Q+G YE L +F M S PD T +L A
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML-RSRIEPDEFTFGSILKA 492
Query: 443 CASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV----------- 491
C G+L G IH+ +K G+ S S VG +L++ Y+KCG + A +
Sbjct: 493 CTG-GSLGYGMEIHSSIVKSGMASNS-SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 492 -----FDGMGEKN----AVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVL 542
+ M K V+W+++ISGY M+ + LF M++ P++ + +VL
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 543 AACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPG 602
C++ G G ++ H + + + +VD+ ++ G+L ++ +K ++
Sbjct: 611 DTCANLASAGLGKQI-HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRD 668
Query: 603 VSVFGAYLHGCGLHSEFELGEVAIRRML--ELHPDQACY 639
+ A + G H + E RM+ + P+ +
Sbjct: 669 FVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 234/482 (48%), Gaps = 27/482 (5%)
Query: 49 KFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
+ HA + F D T L +YA ++ A+ LFD+ + N S+ AM+ Y
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 361
Query: 105 LHSDVVSFYH-LTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFV 162
+ +H L LGF D + S V +AC+ ++ + + +++ IKS S D V
Sbjct: 362 HGFKALLLFHRLMSSGLGF--DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
N +D Y KC + A +VFDE+ R+ VSW ++ A+ QN E L LF M +
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
+ ++FT GS++ ACT GSL G +H +VKSG+ NS + SL++MY KCG I +A K
Sbjct: 480 EPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Query: 283 VFDEMLT------SDDELD----------LVSWTAMIVGYSQRGHPLKALELFTDRNWAG 326
+ + +EL+ VSW ++I GY + A LFT G
Sbjct: 539 IHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 598
Query: 327 ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDAR 386
I P+ +G +H V+K L + + + L+DMY+KC + D+R
Sbjct: 599 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 658
Query: 387 YVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
+FE ++++D V+WN+ I G A G EA+++F+RM E+ P+ VT + +L ACA +
Sbjct: 659 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI-KPNHVTFISILRACAHM 717
Query: 447 GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSA 505
G + G +D + + + +++ K G K A + M E + V W
Sbjct: 718 GLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 777
Query: 506 MI 507
++
Sbjct: 778 LL 779
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 164/593 (27%), Positives = 279/593 (47%), Gaps = 46/593 (7%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSA 179
GF V + +L+ + RD V A+ V P D N +++ YSK + A
Sbjct: 78 GFRPTTFVLNCLLQVYTNSRDFVSAS----MVFDKMPLRDVVSWNKMINGYSKSNDMFKA 133
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGF-VDGNDFTVGSLVTACT 237
F+ + R+VVSW SM Y+QN +++ + +F M REG DG F + ++ C+
Sbjct: 134 NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI--ILKVCS 191
Query: 238 KLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
L G +HG VV+ G + A++LL+MY K ++ +VF + E + V
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI----PEKNSV 247
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLV 357
SW+A+I G Q AL+ F + + +G LH
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307
Query: 358 VKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEAL 417
+K + VR A +DMYAKC + DA+ +F+ + + S+N+ I+G +Q ++AL
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
+F R+ S D +++ GV ACA + L G I+ A+K L S + V A ++
Sbjct: 368 LLFHRLMSSGLG-FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL-SLDVCVANAAID 425
Query: 478 FYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVV 537
Y KC A VFD M ++AV+W+A+I+ + G G ++ LF ML+ EP+E
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 538 FTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC-MVDLLARAGNLKEA------ 590
F S+L AC+ G +G G + + + + + S C ++D+ ++ G ++EA
Sbjct: 486 FGSILKACT-GGSLGYGMEIHSSIVK--SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 591 ----------LDFIDKM---PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLEL--HPD 635
++ ++KM +Q + + + G + + E ++ RM+E+ PD
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 636 QACYYVLVSNLYASDGRWGMVKQVR-EMIKQRGLNKVPGCSLVEIDLNDTYSK 687
+ Y ++ A+ G+ KQ+ ++IK+ + V CS L D YSK
Sbjct: 603 KFTYATVLDTC-ANLASAGLGKQIHAQVIKKELQSDVYICST----LVDMYSK 650
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 225/489 (46%), Gaps = 54/489 (11%)
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM-------- 287
C K G+L GK H +++ SG +F+ LL +Y D A VFD+M
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 288 -------LTSDDEL------------DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL 328
S+D D+VSW +M+ GY Q G LK++E+F D GI
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 329 PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYV 388
+ +GM +HG+VV+ G + +AL+DMYAK ++ V
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 389 FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA 448
F+ +K+ VSW++ I+GC Q+ AL+ F+ M+ + ++ VL +CA+L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSE 296
Query: 449 LPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMIS 508
L LG +HA ALK + I V TA L+ YAKC + + A+++FD N +++AMI+
Sbjct: 297 LRLGGQLHAHALKSDFAADGI-VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 509 GYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
GY + G ++ LF ++ +E+ + V AC+ + EG +++ + +
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK----- 410
Query: 569 PSMKHYACM----VDLLARAGNLKEALDFIDKMPVQPGVS---VFGAY-LHGCGLHSEFE 620
S+ C+ +D+ + L EA D+M + VS + A+ +G G + F
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 621 LGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGL--NKVPGCSLVE 678
+ R + PD+ + ++ +GM ++ I + G+ N GCSL+
Sbjct: 471 FVSMLRSR---IEPDEFTFGSILKACTGGSLGYGM--EIHSSIVKSGMASNSSVGCSLI- 524
Query: 679 IDLNDTYSK 687
D YSK
Sbjct: 525 ----DMYSK 529
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 38/208 (18%)
Query: 439 VLSACASLGALPLGSSIHAFALKDG------LVSCSIYVGT------------------- 473
V CA GAL LG HA + G +++C + V T
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 474 -----ALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
++N Y+K D A F+ M ++ V+W++M+SGY G+ + SI +F DM +
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR---ELNFVPSMKHYACMVDLLARAG 585
E E + F +L CS G ++ ++ R + + V + + ++D+ A+
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAA----SALLDMYAKGK 229
Query: 586 NLKEALDFIDKMPVQPGVSVFGAYLHGC 613
E+L +P + VS + A + GC
Sbjct: 230 RFVESLRVFQGIPEKNSVS-WSAIIAGC 256
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 294/556 (52%), Gaps = 15/556 (2%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERN 190
+L+ C+ Q ++HC+++KSG + N L+D Y KC A KVFD + ERN
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 191 VVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHG 250
VVSW+++ +V N L LF+ M + N+FT + + AC L +L +G +HG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRG 310
+ +K G + + SL++MY KCG I +A KVF ++ + L+SW AMI G+ G
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV----DRSLISWNAMIAGFVHAG 187
Query: 311 HPLKALELFTDRNWAGI--LPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF--DNT 366
+ KAL+ F A I P+ G +HG +V+ G +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
+ +L+D+Y KC + AR F+ +K ++SW+S I G AQ G EA+ +F+R++ E
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ-E 306
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK--DGLVSCSIYVGTALLNFYAKCGD 484
S D+ + ++ A L G + A A+K GL + V ++++ Y KCG
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS---VLNSVVDMYLKCGL 363
Query: 485 AKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAA 544
A F M K+ ++W+ +I+GYG G G S+ +F +ML+ EP+EV + +VL+A
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 545 CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
CSHSGM+ EG LF + P ++HYAC+VDLL RAG LKEA ID MP++P V
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 605 VFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIK 664
++ L C +H + ELG+ + +L + YV++SNLY G W RE+
Sbjct: 484 IWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGN 543
Query: 665 QRGLNKVPGCSLVEID 680
+GL K G S VEI+
Sbjct: 544 IKGLKKEAGMSWVEIE 559
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 221/445 (49%), Gaps = 14/445 (3%)
Query: 78 ARRLFDHLPSPNLHSFKAMLRWYFLN-NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKAC 136
A ++FD +P N+ S+ A++ + LN +L + F + R G + + FS LKAC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ--GIYPNEFTFSTNLKAC 117
Query: 137 SELRDVVQAARLHCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWT 195
L + + ++H +K G V N LVD YSKCG + A KVF I +R+++SW
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 196 SMFVAYVQNDCAVEGLRLFNRMREGFVDG--NDFTVGSLVTACTKLGSLHQGKWVHGYVV 253
+M +V + L F M+E + ++FT+ SL+ AC+ G ++ GK +HG++V
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 254 KSGIHVNS--FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
+SG H S + SL+++YVKCG + ARK FD++ E ++SW+++I+GY+Q G
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI----KEKTMISWSSLILGYAQEGE 293
Query: 312 PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA 371
++A+ LF + G + L VK T V N+
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
++DMY KC LV +A F KDV+SW I+G + G +++ +F M + P
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE-P 412
Query: 432 DAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
D V + VLSAC+ G + G + + L+ + + +++ + G K A+ +
Sbjct: 413 DEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Query: 492 FDGMGEK-NAVTWSAMISGYGMQGD 515
D M K N W ++S + GD
Sbjct: 473 IDTMPIKPNVGIWQTLLSLCRVHGD 497
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 224/445 (50%), Gaps = 26/445 (5%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
S++ CT+ G QG VH Y++KSG +N + L++MY KC + A KVFD M
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM--- 67
Query: 291 DDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG 350
E ++VSW+A++ G+ G +L LF++ GI PN G
Sbjct: 68 -PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 351 MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQS 410
+ +HG +K G V N+L+DMY+KC +++A VF V + ++SWN+ I+G +
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 411 GSAYEALEMFQRMRSESFSP-PDAVTVVGVLSACASLGALPLGSSIHAFALKDGL-VSCS 468
G +AL+ F M+ + PD T+ +L AC+S G + G IH F ++ G S
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
+ +L++ Y KCG SAR FD + EK ++WS++I GY +G+ V ++ LF+ + +
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM---VDLLARAG 585
+ + +S++ + ++ +G ++ + + +PS + + VD+ + G
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK----LPSGLETSVLNSVVDMYLKCG 362
Query: 586 NLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLEL-----HPDQACYY 640
+ EA +M ++ +S + + G G H LG+ ++R E+ PD+ CY
Sbjct: 363 LVDEAEKCFAEMQLKDVIS-WTVVITGYGKHG---LGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 641 VLVSNLYASDGRWGMVKQVREMIKQ 665
++S S GM+K+ E+ +
Sbjct: 419 AVLSACSHS----GMIKEGEELFSK 439
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 430 PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSAR 489
P +V +L C G G +H + LK G ++ L++ Y KC + A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPLMAY 61
Query: 490 MVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSG 549
VFD M E+N V+WSA++SG+ + GD GS++LF +M ++ PNE F++ L AC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA 590
+ +G ++ H C ++ F ++ +VD+ ++ G + EA
Sbjct: 122 ALEKGLQI-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 161
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 130/293 (44%), Gaps = 19/293 (6%)
Query: 10 HSSKSLIQFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGF--------PG 61
+ SK+L F + A P L+ + K + +A +HGF P
Sbjct: 188 YGSKALDTFGMMQE--ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 62 DT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTR 117
L+ LY G+L AR+ FD + + S+ +++ Y + + + +
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 118 YTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS--DGFVLNGLVDAYSKCGH 175
L D S ++ ++ + Q ++ +K PS + VLN +VD Y KCG
Sbjct: 306 -ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL-PSGLETSVLNSVVDMYLKCGL 363
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA 235
V A K F E+ ++V+SWT + Y ++ + +R+F M ++ ++ ++++A
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 236 CTKLGSLHQGKWVHGYVVKS-GIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
C+ G + +G+ + ++++ GI ++++ + G + +A+ + D M
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 191/610 (31%), Positives = 318/610 (52%), Gaps = 70/610 (11%)
Query: 144 QAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYV 202
+ + H ++KSG +DG++ L+ +YS A V I + + S++S+ A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 203 QNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF 262
+ + + +F+RM + + + +L C +L + GK +H SG+ +++F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 263 LATSLLNMYVKCGDIGDARKVFD-------------------------------EMLTSD 291
+ S+ +MY++CG +GDARKVFD EM +S
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM 351
E ++VSW ++ G+++ G+ +A+ +F + G P+ MG
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAK---------------------CH---------- 380
L+HG V+K GL + V +A+IDMY K C+
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 381 LVSDARYVFE----TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTV 436
LV A +FE T++ +VVSW S I+GCAQ+G EALE+F+ M+ P + VT+
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP-NHVTI 391
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
+L AC ++ AL G S H FA++ L+ +++VG+AL++ YAKCG +++VF+ M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 497 EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSR 556
KN V W+++++G+ M G +++F +++ +P+ + FTS+L+AC G+ EG +
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 557 LFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH 616
F MM E P ++HY+CMV+LL RAG L+EA D I +MP +P V+GA L+ C L
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 617 SEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSL 676
+ +L E+A ++ L P+ YVL+SN+YA+ G W V +R ++ GL K PGCS
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 677 VEIDLNDTYS 686
+++ N Y+
Sbjct: 631 IQVK-NRVYT 639
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/537 (23%), Positives = 231/537 (43%), Gaps = 74/537 (13%)
Query: 51 HASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLH 106
HA ++ G D KL++ Y+++ A + +P P ++SF +++ L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 107 SDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNG 165
+ + + ++ G D V + K C+EL ++HC SG D FV
Sbjct: 98 TQSIGVFS-RMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 166 LVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGN 225
+ Y +CG + ARKVFD +++++VV+ +++ AY + C E +R+ + M ++ N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 226 -----------------------------------DFTVGSLVTACTKLGSLHQGKWVHG 250
TV S++ + L+ G+ +HG
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGD-------------------------------IGD 279
YV+K G+ + + +++++MY K G +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXX 339
A ++F+ EL++VSWT++I G +Q G ++ALELF + AG+ PN
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS 399
G HG V+ L DN V +ALIDMYAKC ++ ++ VF K++V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA 459
WNS ++G + G A E + +F+ + PD ++ +LSAC +G G
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLK-PDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGD 515
++ + + + ++N + G + A + M E ++ W A+++ +Q +
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 196/624 (31%), Positives = 324/624 (51%), Gaps = 18/624 (2%)
Query: 60 PGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYT 119
P T+ L +A + A +LFD + + + M++ + L+ + V FY +
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124
Query: 120 LGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCS 178
G D + V+K+ + + + + ++H VIK G SD +V N L+ Y K G
Sbjct: 125 -GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD 183
Query: 179 ARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTK 238
A KVF+E+ ER++VSW SM Y+ L LF M + + F+ S + AC+
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 239 LGSLHQGKWVHGYVVKSGIHVNSFLA-TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
+ S GK +H + V+S I + TS+L+MY K G++ A ++F+ M+ + ++V
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI----QRNIV 299
Query: 298 SWTAMIVGYSQRGHPLKALELF---TDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
+W MI Y++ G A F +++N G+ P+ G +H
Sbjct: 300 AWNVMIGCYARNGRVTDAFLCFQKMSEQN--GLQPDVITSINLLPASAILE----GRTIH 353
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
G ++ G + + ALIDMY +C + A +F+ +K+V+SWNS I+ Q+G Y
Sbjct: 354 GYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTA 474
ALE+FQ + S PD+ T+ +L A A +L G IHA+ +K S +I + +
Sbjct: 414 SALELFQELWDSSL-VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS- 471
Query: 475 LLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPN 534
L++ YA CGD + AR F+ + K+ V+W+++I Y + G G S+ LF +M+ PN
Sbjct: 472 LVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 535 EVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFI 594
+ F S+LAACS SGMV EG F M RE P ++HY CM+DL+ R GN A F+
Sbjct: 532 KSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFL 591
Query: 595 DKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWG 654
++MP P ++G+ L+ H + + E A ++ ++ D YVL+ N+YA GRW
Sbjct: 592 EEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWE 651
Query: 655 MVKQVREMIKQRGLNKVPGCSLVE 678
V +++ +++ +G+++ S VE
Sbjct: 652 DVNRIKLLMESKGISRTSSRSTVE 675
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM- 423
N P + +A L+ DA +F+ + D WN I G G EA++ + RM
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 424 ----RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFY 479
++++F+ P V+ + A + +L G IHA +K G VS +YV +L++ Y
Sbjct: 123 FAGVKADTFTYP------FVIKSVAGISSLEEGKKIHAMVIKLGFVS-DVYVCNSLISLY 175
Query: 480 AKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFT 539
K G A A VF+ M E++ V+W++MISGY GDG S+ LF++MLK +P+
Sbjct: 176 MKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTM 235
Query: 540 SVLAACSH 547
S L ACSH
Sbjct: 236 SALGACSH 243
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 286/562 (50%), Gaps = 6/562 (1%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGP--SDGFVLNGLVDAYSKCGHVCS 178
GF + F V KAC+ L DV +H H+IKS P SD FV VD + KC V
Sbjct: 47 GFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKS-PFWSDVFVGTATVDMFVKCNSVDY 105
Query: 179 ARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTK 238
A KVF+ + ER+ +W +M + Q+ + LF MR + + TV +L+ + +
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF 165
Query: 239 LGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVS 298
SL + +H ++ G+ V +A + ++ Y KCGD+ A+ VF+ + D + VS
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV--VS 223
Query: 299 WTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
W +M YS G A L+ P+ G L+H +
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALE 418
G + N I MY+K AR +F+ + VSW ISG A+ G EAL
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 419 MFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNF 478
+F M +S PD VT++ ++S C G+L G I A A G ++ + AL++
Sbjct: 344 LFHAM-IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402
Query: 479 YAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVF 538
Y+KCG AR +FD EK VTW+ MI+GY + G + ++ LF M+ + +PN + F
Sbjct: 403 YSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITF 462
Query: 539 TSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP 598
+VL AC+HSG + +G FH+M + N P + HY+CMVDLL R G L+EAL+ I M
Sbjct: 463 LAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMS 522
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQ 658
+P ++GA L+ C +H ++ E A + L P A YV ++N+YA+ G W +
Sbjct: 523 AKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFAR 582
Query: 659 VREMIKQRGLNKVPGCSLVEID 680
+R ++KQR + K PG S+++++
Sbjct: 583 IRSIMKQRNIKKYPGESVIQVN 604
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 213/459 (46%), Gaps = 17/459 (3%)
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
R+++ +V +W V + VE L LF M+ G + N+FT + AC +L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
+ + VH +++KS + F+ T+ ++M+VKC + A KVF+ M E D +W
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERM----PERDATTW 121
Query: 300 TAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
AM+ G+ Q GH KA LF + I P+ + +H + ++
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 181
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKD--VVSWNSFISGCAQSGSAYEAL 417
G+ V N I Y KC + A+ VFE + D VVSWNS + G A++A
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
++ M E F PD T + + ++C + L G IH+ A+ G I ++
Sbjct: 242 GLYCLMLREEFK-PDLSTFINLAASCQNPETLTQGRLIHSHAIHLG-TDQDIEAINTFIS 299
Query: 478 FYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVV 537
Y+K D SAR++FD M + V+W+ MISGY +GD ++ALF M+K +P+ V
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 538 FTSVLAACSHSGMVGEG----SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDF 593
S+++ C G + G +R C+ N + ++D+ ++ G++ EA D
Sbjct: 360 LLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC----NALIDMYSKCGSIHEARDI 415
Query: 594 IDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLEL 632
D P + V + + G L+ F +M++L
Sbjct: 416 FDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 13/267 (4%)
Query: 37 LSPICKNIDTVKK---FHASLIVHGFPGDTK----LLSLYASFGFLRHARRLFDHLPSPN 89
L+ C+N +T+ + H+ I G D + +S+Y+ AR LFD + S
Sbjct: 262 LAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRT 321
Query: 90 LHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLH 149
S+ M+ Y + ++ +H + G DLV ++ C + + +
Sbjct: 322 CVSWTVMISGYAEKGDMDEALALFHAMIKS-GEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 150 CHVIKSGPSDGFVL--NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCA 207
G V+ N L+D YSKCG + AR +FD E+ VV+WT+M Y N
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 208 VEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA--T 265
+E L+LF++M + N T +++ AC GSL +G W + +++K +++ L +
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHYS 499
Query: 266 SLLNMYVKCGDIGDARKVFDEMLTSDD 292
++++ + G + +A ++ M D
Sbjct: 500 CMVDLLGRKGKLEEALELIRNMSAKPD 526
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/648 (31%), Positives = 324/648 (50%), Gaps = 13/648 (2%)
Query: 34 TLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSF 93
+L P+ +NI + ++ ++ F ++ L SL + G LR AR++FD +P ++ S+
Sbjct: 20 SLLQKPVEENIVRI----SNQVMVKFDPNSHLRSLINA-GNLRAARQVFDKMPHGDIVSW 74
Query: 94 KAMLRWYFL-NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHV 152
++++ Y NN ++ F + D V S+VLKAC + ++ LH +
Sbjct: 75 TSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYA 134
Query: 153 IKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
+K+ S +V + L+D Y + G + + +VF E+ RN V+WT++ V EGL
Sbjct: 135 VKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGL 194
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
F+ M + +T + AC L + GK +H +V+ G +A SL MY
Sbjct: 195 TYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMY 254
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
+CG++ D +F+ M E D+VSWT++IV Y + G +KA+E F + + PN
Sbjct: 255 TECGEMQDGLCLFENM----SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNE 310
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFET 391
G LH V+ GL D+ V N+++ MY+ C + A +F+
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQG 370
Query: 392 TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPL 451
+D++SW++ I G Q+G E + F MR P D + +LS ++ +
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD-FALASLLSVSGNMAVIEG 429
Query: 452 GSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYG 511
G +HA AL GL S V ++L+N Y+KCG K A M+F + V+ +AMI+GY
Sbjct: 430 GRQVHALALCFGLEQNST-VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 512 MQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSM 571
G +I LF LK P+ V F SVL AC+HSG + G F+MM N P+
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAK 548
Query: 572 KHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE 631
+HY CMVDLL RAG L +A I++M + V+ L C + E G A R+LE
Sbjct: 549 EHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 608
Query: 632 LHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
L P A V ++N+Y+S G VR+ +K +G+ K PG S ++I
Sbjct: 609 LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKI 656
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 188/515 (36%), Positives = 279/515 (54%), Gaps = 39/515 (7%)
Query: 166 LVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGN 225
L+ AY+ V SARKVFDEI ERNV+ M +YV N EG+++F M V +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 226 DFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFD 285
+T ++ AC+ G++ G+ +HG K G+ F+ L++MY KCG + +AR V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 286 EMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXX 345
EM D+VSW +++VGY+Q ALE+ + I +
Sbjct: 200 EM----SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT------------ 243
Query: 346 XXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFIS 405
M LL + NT N MY K +F +K +VSWN I
Sbjct: 244 ---MASLLPAV-------SNTTTENV---MYVK--------DMFFKMGKKSLVSWNVMIG 282
Query: 406 GCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLV 465
++ EA+E++ RM ++ F P DAV++ VL AC AL LG IH + + L+
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEP-DAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 466 SCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRD 525
++ + AL++ YAKCG + AR VF+ M ++ V+W+AMIS YG G G ++ALF
Sbjct: 342 P-NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 400
Query: 526 MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAG 585
+ P+ + F + LAACSH+G++ EG F +M P ++H ACMVDLL RAG
Sbjct: 401 LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 586 NLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSN 645
+KEA FI M ++P V+GA L C +HS+ ++G +A ++ +L P+Q+ YYVL+SN
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 646 LYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+YA GRW V +R ++K +GL K PG S VE++
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 207/479 (43%), Gaps = 45/479 (9%)
Query: 43 NIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLR 98
+I T++ H+ +I+ ++ KL+ YAS + AR++FD +P N+ M+R
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 99 WYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS 158
Y N + + V + T D F VLKACS +V ++H K G S
Sbjct: 114 SYVNNGFYGEGVKVFG-TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 159 DG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM 217
FV NGLV Y KCG + AR V DE++ R+VVSW S+ V Y QN + L + M
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 218 REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDI 277
+ + T+ SL+ A + T+ MYVK
Sbjct: 233 ESVKISHDAGTMASLLPAVSN-------------------------TTTENVMYVK---- 263
Query: 278 GDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXX 337
+M + LVSW MI Y + P++A+EL++ G P+
Sbjct: 264 --------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDV 397
+G +HG + + L N + NALIDMYAKC + AR VFE +DV
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA 457
VSW + IS SG +A+ +F +++ PD++ V L+AC+ G L G S
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHAGLLEEGRSCFK 434
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSA-RMVFDGMGEKNAVTWSAMISGYGMQGD 515
++ + +++ + G K A R + D E N W A++ + D
Sbjct: 435 LMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 209/665 (31%), Positives = 337/665 (50%), Gaps = 23/665 (3%)
Query: 30 PHPPTLYLSPIC-----KNIDTVKKFHASLIVHG----FPGDTKLLSLYASFGFLRHARR 80
PH TL L + +N+ + H +I G L++ YA G L A
Sbjct: 12 PHTSTL-LKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 81 LFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLG--FFHDLVVFSIVLKACSE 138
+F+ + ++ S+ +++ Y N S + L R + + + KA S
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 139 LRDVVQAARLHCHVIK-SGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSM 197
L+ + H V+K S D +V LV Y K G V KVF + ERN +W++M
Sbjct: 131 LQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTM 190
Query: 198 FVAYVQNDCAVEGLRLFN---RMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK 254
Y E +++FN R +E D +D+ +++++ + G+ +H +K
Sbjct: 191 VSGYATRGRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
+G+ L+ +L+ MY KC + +A K+FD S + + ++W+AM+ GYSQ G L+
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFD----SSGDRNSITWSAMVTGYSQNGESLE 305
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALID 374
A++LF+ AGI P+ G LH ++K G + AL+D
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVD 365
Query: 375 MYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV 434
MYAK ++DAR F+ ++DV W S ISG Q+ EAL +++RM++ P D
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP- 424
Query: 435 TVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDG 494
T+ VL AC+SL L LG +H +K G + +G+AL Y+KCG + +VF
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGF-GLEVPIGSALSTMYSKCGSLEDGNLVFRR 483
Query: 495 MGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
K+ V+W+AMISG G G ++ LF +ML E EP++V F ++++ACSH G V G
Sbjct: 484 TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Query: 555 SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCG 614
F+MM ++ P + HYACMVDLL+RAG LKEA +FI+ + G+ ++ L C
Sbjct: 544 WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACK 603
Query: 615 LHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGC 674
H + ELG A +++ L ++ YV +S +Y + GR V++V + ++ G++K GC
Sbjct: 604 NHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGC 663
Query: 675 SLVEI 679
S +E+
Sbjct: 664 SWIEL 668
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 198/665 (29%), Positives = 314/665 (47%), Gaps = 16/665 (2%)
Query: 24 YIAFTLPHPPTLY-LSPICKNIDTVK---KFHASLIVHGFPGDT----KLLSLYASFGFL 75
Y+ +P P + CK I++++ + H ++ GF DT L+SLY G L
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 76 RHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKA 135
A +F ++ + ++ ++ + + G D + ++ A
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVA 398
Query: 136 CSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSW 194
CS + + +LH + K G S+ + L++ Y+KC + +A F E NVV W
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 195 TSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK 254
M VAY D R+F +M+ + N +T S++ C +LG L G+ +H ++K
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
+ +N+++ + L++MY K G + A + D +VSWT MI GY+Q K
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD----VVSWTTMIAGYTQYNFDDK 574
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALID 374
AL F GI + G +H G + P +NAL+
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 375 MYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV 434
+Y++C + ++ FE T D ++WN+ +SG QSG+ EAL +F RM E +
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN-F 693
Query: 435 TVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDG 494
T + A + + G +HA K G S V AL++ YAKCG A F
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDS-ETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 495 MGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
+ KN V+W+A+I+ Y G G ++ F M+ PN V VL+ACSH G+V +G
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 555 SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCG 614
F M E P +HY C+VD+L RAG L A +FI +MP++P V+ L C
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872
Query: 615 LHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGC 674
+H E+GE A +LEL P+ + YVL+SNLYA +W R+ +K++G+ K PG
Sbjct: 873 VHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQ 932
Query: 675 SLVEI 679
S +E+
Sbjct: 933 SWIEV 937
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 261/556 (46%), Gaps = 18/556 (3%)
Query: 43 NIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLR 98
++D +K H+ ++ G + KL Y G L A ++FD +P + ++ M++
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 99 WYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKAC---SELRDVVQAARLHCHVIKS 155
NL +V + + + + FS VL+AC S DVV+ ++H ++
Sbjct: 160 ELASRNLIGEVFGLF-VRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE--QIHARILYQ 216
Query: 156 GPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLF 214
G D V+ N L+D YS+ G V AR+VFD + ++ SW +M +N+C E +RLF
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 215 NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC 274
M + + S+++AC K+ SL G+ +HG V+K G ++++ +L+++Y
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 275 GDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXX 334
G++ A +F M + D V++ +I G SQ G+ KA+ELF + G+ P+
Sbjct: 337 GNLISAEHIFSNM----SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 335 XXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQ 394
G LH K G N + AL+++YAKC + A F T
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 452
Query: 395 KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
++VV WN + + +F++M+ E P+ T +L C LG L LG
Sbjct: 453 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI-VPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
IH+ +K + YV + L++ YAK G +A + K+ V+W+ MI+GY
Sbjct: 512 IHSQIIKTNF-QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
++ FR ML +EV T+ ++AC+ + EG ++ C F +
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQ 629
Query: 575 ACMVDLLARAGNLKEA 590
+V L +R G ++E+
Sbjct: 630 NALVTLYSRCGKIEES 645
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 219/466 (46%), Gaps = 16/466 (3%)
Query: 179 ARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTK 238
R VF + S+ ++ V Y+ D + + R+ + G + N T+ L+ C K
Sbjct: 39 TRTVFPTLCGTRRASFAAISV-YISEDESFQEKRIDSVENRG-IRPNHQTLKWLLEGCLK 96
Query: 239 L-GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
GSL +G+ +H ++K G+ N L+ L + Y+ GD+ A KVFDEM E +
Sbjct: 97 TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM----PERTIF 152
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX-XXXXXXXXMGMLLHGL 356
+W MI + R + LF + PN + +H
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
++ GL D+T V N LID+Y++ V AR VF+ KD SW + ISG +++ EA
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 417 LEMFQRMRSESFSP-PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTAL 475
+ +F M P P A + VLSAC + +L +G +H LK G S YV AL
Sbjct: 273 IRLFCDMYVLGIMPTPYAFS--SVLSACKKIESLEIGEQLHGLVLKLGF-SSDTYVCNAL 329
Query: 476 LNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNE 535
++ Y G+ SA +F M +++AVT++ +I+G G G ++ LF+ M + EP+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID 595
S++ ACS G + G +L H +L F + K +++L A+ +++ ALD+
Sbjct: 390 NTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 596 KMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRML--ELHPDQACY 639
+ V+ V ++ L GL + R+M E+ P+Q Y
Sbjct: 449 ETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 256/466 (54%), Gaps = 7/466 (1%)
Query: 215 NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC 274
N + ++ + +L+ CT L QG+ VH ++++S + + +LLNMY KC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 275 GDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXX 334
G + +ARKVF++M + D V+WT +I GYSQ P AL F G PN
Sbjct: 109 GSLEEARKVFEKM----PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164
Query: 335 XXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQ 394
G LHG VKCG N V +AL+D+Y + L+ DA+ VF+
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224
Query: 395 KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
++ VSWN+ I+G A+ +ALE+FQ M + F P + + AC+S G L G
Sbjct: 225 RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH-FSYASLFGACSSTGFLEQGKW 283
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
+HA+ +K G + G LL+ YAK G AR +FD + +++ V+W+++++ Y G
Sbjct: 284 VHAYMIKSG-EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
G ++ F +M + PNE+ F SVL ACSHSG++ EG + +M ++ VP HY
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHY 401
Query: 575 ACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP 634
+VDLL RAG+L AL FI++MP++P +++ A L+ C +H ELG A + EL P
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDP 461
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
D +V++ N+YAS GRW +VR+ +K+ G+ K P CS VEI+
Sbjct: 462 DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIE 507
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 201/393 (51%), Gaps = 8/393 (2%)
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVF 183
D ++ +LK C+ + ++Q +H H+++S V+ N L++ Y+KCG + ARKVF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
+++ +R+ V+WT++ Y Q+D + L FN+M N+FT+ S++ A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
G +HG+ VK G N + ++LL++Y + G + DA+ VFD + + +D VSW A+I
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND----VSWNALI 234
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
G+++R KALELF G P+ G +H ++K G
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
N L+DMYAK + DAR +F+ ++DVVSWNS ++ AQ G EA+ F+ M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
R P+ ++ + VL+AC+ G L G + KDG+V + + T +++ + G
Sbjct: 355 RRVGIR-PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT-VVDLLGRAG 412
Query: 484 DAKSARMVFDGMG-EKNAVTWSAMISGYGMQGD 515
D A + M E A W A+++ M +
Sbjct: 413 DLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 15/377 (3%)
Query: 53 SLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSF 112
S+ H LL++YA G L AR++F+ +P + ++ ++ Y ++ D + F
Sbjct: 89 SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLF 148
Query: 113 Y-HLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAY 170
+ + R+ G+ + S V+KA + R +LH +K G S+ V + L+D Y
Sbjct: 149 FNQMLRF--GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 171 SKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTV 229
++ G + A+ VFD + RN VSW ++ + + + L LF M R+GF + F+
Sbjct: 207 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH-FSY 265
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
SL AC+ G L QGKWVH Y++KSG + +F +LL+MY K G I DARK+FD +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
D+VSW +++ Y+Q G +A+ F + GI PN
Sbjct: 326 R----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDA-RYVFETTVQKDVVSWNSFISGCA 408
G + L+ K G+ ++D+ + ++ A R++ E ++ W + ++ C
Sbjct: 382 GWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 409 QSGS----AYEALEMFQ 421
+ AY A +F+
Sbjct: 442 MHKNTELGAYAAEHVFE 458
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 311/621 (50%), Gaps = 11/621 (1%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS-FYHLTRYTLGFF 123
++S + G + AR LFD +P + ++ ++ WY N+ + F + R +
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGF--VLNGLVDAYSKCGHVCSAR 180
D V F+ +L C++ ++H +K G ++ F V N L+ +Y + + A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
+F+EI E++ V++ ++ Y ++ E + LF +MR+ +DFT ++ A L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
G+ +H V +G ++ + +L+ Y K + + R +FDEM ELD VS+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM----PELDFVSYN 320
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
+I YSQ +L F + G MG LH +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
V N+L+DMYAKC + +A +F++ Q+ VSW + ISG Q G L++F
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+MR + D T VL A AS +L LG +HAF ++ G + +++ G+ L++ YA
Sbjct: 441 TKMRGSNLRA-DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYA 498
Query: 481 KCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
KCG K A VF+ M ++NAV+W+A+IS + GDG +I F M++ +P+ V
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ 600
VL ACSH G V +G+ F M P KHYACM+DLL R G EA +D+MP +
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 601 PGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP-DQACYYVLVSNLYASDGRWGMVKQV 659
P ++ + L+ C +H L E A ++ + A YV +SN+YA+ G W V+ V
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 660 REMIKQRGLNKVPGCSLVEID 680
++ +++RG+ KVP S VE++
Sbjct: 679 KKAMRERGIKKVPAYSWVEVN 699
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 232/503 (46%), Gaps = 18/503 (3%)
Query: 140 RDVVQAARLHCHVIKSGPSDGFV-LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMF 198
R V AAR V P V N ++ + K G V SAR +FD + +R VV+WT +
Sbjct: 61 RGQVSAAR---KVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM 117
Query: 199 VAYVQNDCAVEGLRLFNRM-REGFVDGND-FTVGSLVTACTKLGSLHQGKWVHGYVVKSG 256
Y +N E +LF +M R D T +L+ C + VH + VK G
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG 177
Query: 257 IHVNSFLATS--LLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
N FL S LL Y + + A +F+E+ E D V++ +I GY + G +
Sbjct: 178 FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI----PEKDSVTFNTLITGYEKDGLYTE 233
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALID 374
++ LF +G P+ +G LH L V G + V N ++D
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILD 293
Query: 375 MYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV 434
Y+K V + R +F+ + D VS+N IS +Q+ +L F+ M+ F +
Sbjct: 294 FYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN-F 352
Query: 435 TVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDG 494
+LS A+L +L +G +H AL ++VG +L++ YAKC + A ++F
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALL-ATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 495 MGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
+ ++ V+W+A+ISGY +G + LF M ++ F +VL A + + G
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 555 SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCG 614
+L + R N + ++ + +VD+ A+ G++K+A+ ++MP + VS + A +
Sbjct: 472 KQLHAFIIRSGN-LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHA 529
Query: 615 LHSEFELGEVAIRRMLE--LHPD 635
+ + E A +M+E L PD
Sbjct: 530 DNGDGEAAIGAFAKMIESGLQPD 552
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 276/536 (51%), Gaps = 10/536 (1%)
Query: 148 LHCHVIKS--GPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
+H ++K+ P F+ N L++ YSK H SAR V RNVVSWTS+ QN
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 206 CAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLAT 265
L F MR V NDFT A L GK +H VK G ++ F+
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 266 SLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWA 325
S +MY K DARK+FDE+ E +L +W A I G P +A+E F +
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEI----PERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 326 GILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDA 385
PN +GM LHGLV++ G + V N LID Y KC + +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 386 RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
+F K+ VSW S ++ Q+ +A ++ R R + D + VLSACA
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD-FMISSVLSACAG 322
Query: 446 LGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSA 505
+ L LG SIHA A+K V +I+VG+AL++ Y KCG + + FD M EKN VT ++
Sbjct: 323 MAGLELGRSIHAHAVK-ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 506 MISGYGMQGDGVGSIALFRDMLKEEC--EPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
+I GY QG ++ALF +M C PN + F S+L+ACS +G V G ++F M
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 564 ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
P +HY+C+VD+L RAG ++ A +FI KMP+QP +SV+GA + C +H + +LG
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Query: 624 VAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
+A + +L P + +VL+SN +A+ GRW VRE +K G+ K G S + +
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITV 557
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 165/349 (47%), Gaps = 10/349 (2%)
Query: 68 LYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLV 127
+Y AR+LFD +P NL ++ A + + + + + R G + +
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS-I 210
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEI 186
F L ACS+ + +LH V++SG +D V NGL+D Y KC + S+ +F E+
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
+N VSW S+ AYVQN + L+ R R+ V+ +DF + S+++AC + L G+
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+H + VK+ + F+ ++L++MY KCG I D+ + FDEM E +LV+ ++I GY
Sbjct: 331 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM----PEKNLVTRNSLIGGY 386
Query: 307 SQRGHPLKALELFTDR--NWAGILPNXXXXXXXXXXXXXXXXXXMGM-LLHGLVVKCGLF 363
+ +G AL LF + G PN GM + + G+
Sbjct: 387 AHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE 446
Query: 364 DNTPVRNALIDMYAKCHLVSDA-RYVFETTVQKDVVSWNSFISGCAQSG 411
+ ++DM + +V A ++ + +Q + W + + C G
Sbjct: 447 PGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 202/616 (32%), Positives = 313/616 (50%), Gaps = 13/616 (2%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T LL+LY G + A+ LFD +P + + A++ Y N D + + GF
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLF-IVMLQQGF 147
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARK 181
+L C + V Q +H KSG D V N L+ YSKC + SA
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
+F E+ +++ VSW +M AY Q+ E + +F M E V+ + T+ +L++A
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS--- 264
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
H+ +H VVK G+ + + TSL+ Y +CG + A +++ S + +V T+
Sbjct: 265 -HEP--LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY----ASAKQDSIVGLTS 317
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
++ Y+++G A+ F+ + + +GM LHG +K G
Sbjct: 318 IVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSG 377
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
L T V N LI MY+K V ++FE + ++SWNS ISGC QSG A A E+F
Sbjct: 378 LCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFH 437
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
+M PDA+T+ +L+ C+ L L LG +H + L++ + +V TAL++ YAK
Sbjct: 438 QMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN-ENFVCTALIDMYAK 496
Query: 482 CGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
CG+ A VF + TW++MISGY + G +++ + +M ++ +P+E+ F V
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGV 556
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQP 601
L+AC+H G V EG F M +E P+++HYA MV LL RA EAL I KM ++P
Sbjct: 557 LSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKP 616
Query: 602 GVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVRE 661
+V+GA L C +H E E+GE R+M L YVL+SNLYA++ W V +VR
Sbjct: 617 DSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRN 676
Query: 662 MIKQRGLNKVPGCSLV 677
M+K G + G S +
Sbjct: 677 MMKDNGYDGYLGVSQI 692
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/579 (26%), Positives = 270/579 (46%), Gaps = 42/579 (7%)
Query: 107 SDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDV--VQAARLHCHVIKSGPSDGFVL- 163
S + F L R +L H SI L+A + + +Q ++ H+ KSG D FV
Sbjct: 31 SPITIFRDLLRSSLTPNH--FTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGL-DRFVYV 87
Query: 164 -NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
L++ Y K G V SA+ +FDE+ ER+ V W ++ Y +N + +LF M +
Sbjct: 88 KTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGF 147
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
+ T+ +L+ C + G + QG+ VHG KSG+ ++S + +L++ Y KC ++G A
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
+F EM + VSW MI YSQ G +A+ +F + + +
Sbjct: 208 LFREM----KDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHV 263
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
LH LVVKCG+ ++ V +L+ Y++C + A ++ + Q +V S
Sbjct: 264 SHEP------LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTS 317
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
+S A+ G A+ F + R DAV +VG+L C + +G S+H +A+K
Sbjct: 318 IVSCYAEKGDMDIAVVYFSKTRQLCM-KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS 376
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIAL 522
GL + ++ V L+ Y+K D ++ +F+ + E ++W+++ISG G + +
Sbjct: 377 GLCTKTLVV-NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEV 435
Query: 523 FRD-MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC--MVD 579
F ML P+ + S+LA CS + G L R NF +++ C ++D
Sbjct: 436 FHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN-NF--ENENFVCTALID 492
Query: 580 LLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE-----LHP 634
+ A+ GN +A + + K P + + + + G L L A+ LE L P
Sbjct: 493 MYAKCGNEVQA-ESVFKSIKAPCTATWNSMISGYSLSG---LQHRALSCYLEMREKGLKP 548
Query: 635 DQACYYVLVSNL----YASDGRWGMVKQVREMIKQRGLN 669
D+ + ++S + +G+ R MIK+ G++
Sbjct: 549 DEITFLGVLSACNHGGFVDEGKICF----RAMIKEFGIS 583
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 19/274 (6%)
Query: 386 RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
R T+ +D+ ++S + C + + +F+ + S +P + + + S
Sbjct: 2 RITKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTS 61
Query: 446 LGALPLG-SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWS 504
+ L + K GL +YV T+LLN Y K G SA+M+FD M E++ V W+
Sbjct: 62 FNSFKLQVEQVQTHLTKSGLDR-FVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWN 120
Query: 505 AMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRE 564
A+I GY G + LF ML++ P+ ++L C G V +G R H + +
Sbjct: 121 ALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG-RSVHGVAAK 179
Query: 565 LNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS---VFGAYLHGCGLHSE--- 618
+ ++ ++ L A +M + VS + GAY GL E
Sbjct: 180 SGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS-GLQEEAIT 238
Query: 619 ---------FELGEVAIRRMLELHPDQACYYVLV 643
E+ V I +L H + LV
Sbjct: 239 VFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLV 272
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 261/454 (57%), Gaps = 10/454 (2%)
Query: 227 FTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDE 286
FT + AC K + +GK +HG V K G + + ++ SL++ Y CG+ +A KVF E
Sbjct: 107 FTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGE 166
Query: 287 MLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXX 346
M D +VSWT +I G+++ G +AL+ F+ + + PN
Sbjct: 167 MPVRD----VVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGC 219
Query: 347 XXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISG 406
+G +HGL++K + NALIDMY KC +SDA VF +KD VSWNS ISG
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
+ EA+++F M++ S PD + VLSACASLGA+ G +H + L G +
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG-IK 338
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDM 526
++GTA+++ YAKCG ++A +F+G+ KN TW+A++ G + G G+ S+ F +M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 527 LKEECEPNEVVFTSVLAACSHSGMVGEGSRLFH-MMCRELNFVPSMKHYACMVDLLARAG 585
+K +PN V F + L AC H+G+V EG R FH M RE N P ++HY CM+DLL RAG
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 586 NLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEF-ELGEVAIRRMLELHPDQACYYVLVS 644
L EAL+ + MPV+P V + GA L C EL + + L++ + + YVL+S
Sbjct: 459 LLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLS 518
Query: 645 NLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
N++A++ RW V ++R ++K +G++KVPG S +E
Sbjct: 519 NIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 201/435 (46%), Gaps = 22/435 (5%)
Query: 29 LPHPPTLY-LSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPS 87
LP L L C ++ K+ LI D +++ +F + A F S
Sbjct: 3 LPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTF-LGKSAD--FASYSS 59
Query: 88 PNLHSFKAMLRWYFLNNLHSD--------VVSFYHLTRYTLGFFHDLVVFSIVLKACSEL 139
LHS +++L + N L S V F + T + GF D+ F V KAC +
Sbjct: 60 VILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKF 119
Query: 140 RDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMF 198
+ + ++H V K G D +V N LV Y CG +A KVF E+ R+VVSWT +
Sbjct: 120 SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII 179
Query: 199 VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
+ + E L F++M V+ N T ++ + ++G L GK +HG ++K
Sbjct: 180 TGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
++ +L++MYVKC + DA +VF E+ ++ D VSW +MI G +A++L
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGEL----EKKDKVSWNSMISGLVHCERSKEAIDL 292
Query: 319 FT-DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYA 377
F+ + +GI P+ G +H ++ G+ +T + A++DMYA
Sbjct: 293 FSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYA 352
Query: 378 KCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVV 437
KC + A +F K+V +WN+ + G A G E+L F+ M F P+ VT +
Sbjct: 353 KCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK-PNLVTFL 411
Query: 438 GVLSACASLGALPLG 452
L+AC G + G
Sbjct: 412 AALNACCHTGLVDEG 426
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 399 SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAF 458
S+N+ +S A + ++ S FSP D T V AC + G IH
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSP-DMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 459 ALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVG 518
K G IYV +L++FY CG++++A VF M ++ V+W+ +I+G+ G
Sbjct: 132 VTKMGFYD-DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 519 SIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMV 578
++ F M + EPN + VL + G + G + ++ + + + S++ ++
Sbjct: 191 ALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI-SLETGNALI 246
Query: 579 DLLARAGNLKEALDFIDKMPVQPGVS 604
D+ + L +A+ ++ + VS
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVS 272
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
L+ +Y L A R+F L + S+ +M+ + + + L + + G
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVF 183
D + + VL AC+ L V +H +++ +G D + +VD Y+KCG++ +A ++F
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
+ I +NV +W ++ + +E LR F M + N T + + AC G +
Sbjct: 365 NGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 244 QGK 246
+G+
Sbjct: 425 EGR 427
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 319 bits (817), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 205/650 (31%), Positives = 327/650 (50%), Gaps = 34/650 (5%)
Query: 56 VHGFPGDTKLLSLY----ASFGFLRHARR------LFDHLPSPNLHSFKAMLRWYFLNNL 105
+HGF + S A G R A R +F++L P++ S+ +L + N +
Sbjct: 98 IHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI 157
Query: 106 HSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLN 164
+ V + + G D +S L C + +L V+K+G SD V N
Sbjct: 158 ALNFV----VRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGN 213
Query: 165 GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDC-AVEGLRLF-NRMREGFV 222
+ YS+ G AR+VFDE++ ++++SW S+ Q E + +F + MREG V
Sbjct: 214 SFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG-V 272
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
+ + + S++T C L + +HG +K G + L++ Y KCG + +
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
VF +M E ++VSWT MI + A+ +F + + G+ PN
Sbjct: 333 VFHQM----SERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVK 383
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
G+ +HGL +K G V N+ I +YAK + DA+ FE ++++SWN+
Sbjct: 384 CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNA 443
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPL--GSSIHAFAL 460
ISG AQ+G ++EAL+MF +E+ P+ T VL+A A + + G HA L
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAETM--PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL 501
Query: 461 KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSI 520
K GL SC + V +ALL+ YAK G+ + VF+ M +KN W+++IS Y GD +
Sbjct: 502 KLGLNSCPV-VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVM 560
Query: 521 ALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDL 580
LF M+KE P+ V F SVL AC+ GMV +G +F+MM N PS +HY+CMVD+
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDM 620
Query: 581 LARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYY 640
L RAG LKEA + + ++P PG S+ + L C LH ++G +E+ P+ + Y
Sbjct: 621 LGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSY 680
Query: 641 VLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYSKVTI 690
V + N+YA W ++R+ ++++ ++K G S ID+ DT +T+
Sbjct: 681 VQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSW--IDVGDTEGSLTM 728
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 161/602 (26%), Positives = 271/602 (45%), Gaps = 44/602 (7%)
Query: 76 RHARRLFDHLPSPNL-----HSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFF---HDLV 127
R A +LFD N HS LR N + +S + LG+F D V
Sbjct: 25 RIAHKLFDGSSQRNATTSINHSISESLR----RNSPARALSIFK-ENLQLGYFGRHMDEV 79
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARKVFDEI 186
+ LKAC D+ + ++H SG + V N ++ Y K G +A +F+ +
Sbjct: 80 TLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL 137
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
+ +VVSW ++ + N A L RM+ V + FT + ++ C G
Sbjct: 138 VDPDVVSWNTILSGFDDNQIA---LNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGL 194
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+ VVK+G+ + + S + MY + G AR+VFDEM D++SW +++ G
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK----DMISWNSLLSGL 250
Query: 307 SQRG-HPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDN 365
SQ G +A+ +F D G+ + + +HGL +K G
Sbjct: 251 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL 310
Query: 366 TPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
V N L+ Y+KC ++ + VF +++VVSW + I S + +A+ +F MR
Sbjct: 311 LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRF 365
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
+ P+ VT VG+++A + G IH +K G VS VG + + YAK
Sbjct: 366 DGVY-PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS-EPSVGNSFITLYAKFEAL 423
Query: 486 KSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAAC 545
+ A+ F+ + + ++W+AMISG+ G ++ +F E PNE F SVL A
Sbjct: 424 EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAI 482
Query: 546 SHSG--MVGEGSRLF-HMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPG 602
+ + V +G R H++ LN P + + ++D+ A+ GN+ E+ ++M Q
Sbjct: 483 AFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKN 539
Query: 603 VSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSNLYASDGRWGMVKQVR 660
V+ + + H +FE +M++ + PD + +S L A + R GMV +
Sbjct: 540 QFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF---LSVLTACN-RKGMVDKGY 595
Query: 661 EM 662
E+
Sbjct: 596 EI 597
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 239/516 (46%), Gaps = 28/516 (5%)
Query: 179 ARKVFDEIAERNVVSWTSMFVAY-VQNDCAVEGLRLFNR-MREGFVDG--NDFTVGSLVT 234
A K+FD ++RN + + ++ ++ + L +F ++ G+ ++ T+ +
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
AC G L +G +HG+ SG ++ +++ MY K G +A +F+ ++ +
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLV----DP 140
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
D+VSW ++ G+ AL AG++ + +G+ L
Sbjct: 141 DVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS-A 413
VVK GL + V N+ I MY++ AR VF+ KD++SWNS +SG +Q G+
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG 257
Query: 414 YEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGT 473
+EA+ +F+ M E D V+ V++ C L L IH +K G S + VG
Sbjct: 258 FEAVVIFRDMMREGV-ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL-LEVGN 315
Query: 474 ALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEP 533
L++ Y+KCG ++ + VF M E+N V+W+ MIS + ++++F +M + P
Sbjct: 316 ILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYP 370
Query: 534 NEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDF 593
NEV F ++ A + + EG ++ H +C + FV + L A+ L++A
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKI-HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 594 IDKMPVQPGVSVFGAYLHGCGLHS-EFELGEVAIRRMLELHPDQACY-YVLVSNLYASDG 651
+ + + +S + A + G + E ++ + E P++ + VL + +A D
Sbjct: 430 FEDITFREIIS-WNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDI 488
Query: 652 RWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYSK 687
++ + + GLN C +V L D Y+K
Sbjct: 489 SVKQGQRCHAHLLKLGLN---SCPVVSSALLDMYAK 521
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 319 bits (817), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 206/622 (33%), Positives = 313/622 (50%), Gaps = 11/622 (1%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
++L Y FGFL +A LFD +P + S+ M+ Y D + + + G
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRS-GS 97
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARK 181
D FS +LK + ++ ++H VIK G + +V + LVD Y+KC V A +
Sbjct: 98 DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR-EGFVDGNDFTVGSLVTACTKLG 240
F EI+E N VSW ++ +VQ L M + V + T L+T
Sbjct: 158 AFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
+ K VH V+K G+ + ++++ Y CG + DA++VFD + S D L+SW
Sbjct: 218 FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD---LISWN 274
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
+MI G+S+ A ELF + + G LHG+V+K
Sbjct: 275 SMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKK 334
Query: 361 GLFDNTPVRNALIDMYAK--CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALE 418
GL T NALI MY + + DA +FE+ KD++SWNS I+G AQ G + +A++
Sbjct: 335 GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK 394
Query: 419 MFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNF 478
F +RS D +L +C+ L L LG IHA A K G VS + +V ++L+
Sbjct: 395 FFSYLRSSEIKVDD-YAFSALLRSCSDLATLQLGQQIHALATKSGFVS-NEFVISSLIVM 452
Query: 479 YAKCGDAKSARMVFDGMGEKNA-VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVV 537
Y+KCG +SAR F + K++ V W+AMI GY G G S+ LF M + + + V
Sbjct: 453 YSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVT 512
Query: 538 FTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
FT++L ACSH+G++ EG L ++M P M+HYA VDLL RAG + +A + I+ M
Sbjct: 513 FTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
Query: 598 PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVK 657
P+ P V +L C E E+ +LE+ P+ YV +S++Y+ +W
Sbjct: 573 PLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKA 632
Query: 658 QVREMIKQRGLNKVPGCSLVEI 679
V++M+K+RG+ KVPG S +EI
Sbjct: 633 SVKKMMKERGVKKVPGWSWIEI 654
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 230/483 (47%), Gaps = 15/483 (3%)
Query: 149 HCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCA 207
HC+ IK G SD +V N ++D+Y K G + A +FDE+ +R+ VSW +M Y
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 208 VEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSL 267
+ LF M+ D + ++ L+ + G+ VHG V+K G N ++ +SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 268 LNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW-AG 326
++MY KC + DA + F E+ E + VSW A+I G+ Q A L A
Sbjct: 143 VDMYAKCERVEDAFEAFKEI----SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 327 ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDAR 386
+ + + +H V+K GL + NA+I YA C VSDA+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 387 YVFE-TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
VF+ KD++SWNS I+G ++ A E+F +M+ + D T G+LSAC+
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRH-WVETDIYTYTGLLSACSG 317
Query: 446 LGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK--CGDAKSARMVFDGMGEKNAVTW 503
G S+H +K GL + AL++ Y + G + A +F+ + K+ ++W
Sbjct: 318 EEHQIFGKSLHGMVIKKGLEQVT-SATNALISMYIQFPTGTMEDALSLFESLKSKDLISW 376
Query: 504 SAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
+++I+G+ +G ++ F + E + ++ F+++L +CS + G ++ H +
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALAT 435
Query: 564 ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
+ FV + + ++ + ++ G ++ A ++ + + A + G H LG+
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG---LGQ 492
Query: 624 VAI 626
V++
Sbjct: 493 VSL 495
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG 411
L H +KCG + V N ++D Y K + A +F+ ++D VSWN+ ISG G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYV 471
+A +F M+ S S D + +L AS+ LG +H +K G C++YV
Sbjct: 81 KLEDAWCLFTCMK-RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG-YECNVYV 138
Query: 472 GTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGY 510
G++L++ YAKC + A F + E N+V+W+A+I+G+
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 306/573 (53%), Gaps = 36/573 (6%)
Query: 142 VVQAARL-HCHVIKSG-PSDGFVLNGLVDAYSKCGH---VCSARKVFDEIAERNVVSWTS 196
+Q+ R+ H +IK G + + L+ L++ H + A VF I E N++ W +
Sbjct: 45 TLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNT 104
Query: 197 MFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSG 256
MF + + V L+L+ M + N +T ++ +C K + +G+ +HG+V+K G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 257 IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD------------------------D 292
++ ++ TSL++MYV+ G + DA KVFD+ D D
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 293 EL---DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
E+ D+VSW AMI GY++ G+ +ALELF D + P+ +
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G +H + G N + NALID+Y+KC + A +FE KDV+SWN+ I G
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK--DGLVSC 467
EAL +FQ M +P D VT++ +L ACA LGA+ +G IH + K G+ +
Sbjct: 345 MNLYKEALLLFQEMLRSGETPND-VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML 527
S + T+L++ YAKCGD ++A VF+ + K+ +W+AMI G+ M G S LF M
Sbjct: 404 S-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 528 KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
K +P+++ F +L+ACSHSGM+ G +F M ++ P ++HY CM+DLL +G
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 588 KEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLY 647
KEA + I+ M ++P ++ + L C +H ELGE ++++ P+ YVL+SN+Y
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 648 ASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
AS GRW V + R ++ +G+ KVPGCS +EID
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 253/555 (45%), Gaps = 49/555 (8%)
Query: 33 PTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLS-------LYASFGFLRHARRLFDHL 85
P+L L CK + +++ HA +I G LS L F L +A +F +
Sbjct: 35 PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 86 PSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQA 145
PNL + M R + L++ + Y + +LG + F VLK+C++ + +
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLY-VCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 146 ARLHCHVIKSGPS----------DGFVLNG----------------------LVDAYSKC 173
++H HV+K G +V NG L+ Y+
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 174 GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
G++ +A+K+FDEI ++VVSW +M Y + E L LF M + V ++ T+ ++V
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 234 TACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDE 293
+AC + GS+ G+ VH ++ G N + +L+++Y KCG++ A +F+ +
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK--- 330
Query: 294 LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLL 353
D++SW +I GY+ +AL LF + +G PN +G +
Sbjct: 331 -DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 354 HGLVVK--CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG 411
H + K G+ + + +R +LIDMYAKC + A VF + + K + SWN+ I G A G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYV 471
A + ++F RMR P D +T VG+LSAC+ G L LG I +D ++ +
Sbjct: 450 RADASFDLFSRMRKIGIQPDD-ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 472 GTALLNFYAKCGDAK-SARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE 530
+++ G K + M+ E + V W +++ M G+ + +++K E
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIE 568
Query: 531 CE-PNEVVFTSVLAA 544
E P V S + A
Sbjct: 569 PENPGSYVLLSNIYA 583
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 301/555 (54%), Gaps = 14/555 (2%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCG-HVCSARKVFDE 185
+++ +L+ C+++ + + H HV+KSG +D V N L+ Y K G + R+VFD
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 186 IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG 245
++ +SWTSM YV V+ L +F M +D N+FT+ S V AC++LG + G
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
+ HG V+ G N F++++L +Y + DAR+VFDEM E D++ WTA++
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEM----PEPDVICWTAVLSA 238
Query: 306 YSQRGHPLKALELF-TDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
+S+ +AL LF G++P+ G +HG ++ G+
Sbjct: 239 FSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGS 298
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
N V ++L+DMY KC V +AR VF +K+ VSW++ + G Q+G +A+E+F+ M
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
+ D VL ACA L A+ LG IH ++ G ++ V +AL++ Y K G
Sbjct: 359 EK-----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG-NVIVESALIDLYGKSGC 412
Query: 485 AKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAA 544
SA V+ M +N +TW+AM+S G G +++ F DM+K+ +P+ + F ++L A
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 545 CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
C H+GMV EG F +M + P +HY+CM+DLL RAG +EA + +++ + S
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDAS 532
Query: 605 VFGAYLHGCGLHSEF-ELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMI 663
++G L C +++ + E +RM+EL P YVL+SN+Y + GR G +R+++
Sbjct: 533 LWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLM 592
Query: 664 KQRGLNKVPGCSLVE 678
+RG+ K G S ++
Sbjct: 593 VRRGVAKTVGQSWID 607
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 222/496 (44%), Gaps = 52/496 (10%)
Query: 208 VEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSL 267
E +R+ N + SL+ C K+ S G H +VVKSG+ + + SL
Sbjct: 43 TEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSL 102
Query: 268 LNMYVKCG-DIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG 326
L++Y K G + + R+VFD D +SWT+M+ GY +KALE+F + G
Sbjct: 103 LSLYFKLGPGMRETRRVFDGRFVK----DAISWTSMMSGYVTGKEHVKALEVFVEMVSFG 158
Query: 327 ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDAR 386
+ N +G HG+V+ G N + + L +Y DAR
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 387 YVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
VF+ + DV+ W + +S +++ EAL +F M PD T VL+AC +L
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 447 GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAM 506
L G IH + +G+ S ++ V ++LL+ Y KCG + AR VF+GM +KN+V+WSA+
Sbjct: 279 RRLKQGKEIHGKLITNGIGS-NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 507 ISGYGMQGDGVGSIALFRDM-------------------------------LKEECEPNE 535
+ GY G+ +I +FR+M ++ C N
Sbjct: 338 LGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNV 397
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID 595
+V ++++ SG + SR++ M + +M + M+ LA+ G +EA+ F +
Sbjct: 398 IVESALIDLYGKSGCIDSASRVYSKMS-----IRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 596 KM---PVQPGVSVFGAYLHGCGLHSEFELGE---VAIRRMLELHPDQACYYVLVSNLYAS 649
M ++P F A L CG + G V + + + P Y ++ L
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLL--- 509
Query: 650 DGRWGMVKQVREMIKQ 665
GR G+ ++ ++++
Sbjct: 510 -GRAGLFEEAENLLER 524
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 179/384 (46%), Gaps = 15/384 (3%)
Query: 50 FHASLIVHGFPGDTKLLSLYAS-FGFLRH---ARRLFDHLPSPNLHSFKAMLRWYFLNNL 105
FH +I HGF + + S A +G R ARR+FD +P P++ + A+L + N+L
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 106 HSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLN 164
+ + + ++ G D F VL AC LR + Q +H +I +G S+ V +
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 165 GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDG 224
L+D Y KCG V AR+VF+ ++++N VSW+++ Y QN + + +F M E
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----K 360
Query: 225 NDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVF 284
+ + G+++ AC L ++ GK +HG V+ G N + ++L+++Y K G I A +V+
Sbjct: 361 DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXX 344
+M ++++W AM+ +Q G +A+ F D GI P+
Sbjct: 421 SKMSIR----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 345 XXXXMGMLLHGLVVKC-GLFDNTPVRNALIDMYAKCHLVSDARYVFE-TTVQKDVVSWNS 402
G L+ K G+ T + +ID+ + L +A + E + D W
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 403 FISGCAQSGSAYEALEMFQRMRSE 426
+ CA + A E + E
Sbjct: 537 LLGPCAANADASRVAERIAKRMME 560
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 328/646 (50%), Gaps = 15/646 (2%)
Query: 42 KNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLP-SPNLHSFKAM 96
K++ +K H ++ G D L+++Y + AR +F++ +++ + ++
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSL 77
Query: 97 LRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
+ Y N++ D + + D F V+KA L +H V+KSG
Sbjct: 78 MSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSG 137
Query: 157 -PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFN 215
D V + LV Y+K ++ +VFDE+ ER+V SW ++ + Q+ A + L LF
Sbjct: 138 YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFG 197
Query: 216 RMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG 275
RM + N ++ ++AC++L L +GK +H VK G ++ ++ ++L++MY KC
Sbjct: 198 RMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCD 257
Query: 276 DIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXX 335
+ AR+VF +M LV+W +MI GY +G +E+ G P+
Sbjct: 258 CLEVAREVFQKM----PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 336 XXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK 395
G +HG V++ + + V +LID+Y KC + A VF T QK
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT-QK 372
Query: 396 DVV-SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
DV SWN IS G+ ++A+E++ +M S PD VT VL AC+ L AL G
Sbjct: 373 DVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV-KPDVVTFTSVLPACSQLAALEKGKQ 431
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
IH ++ + + + +ALL+ Y+KCG+ K A +F+ + +K+ V+W+ MIS YG G
Sbjct: 432 IH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
++ F +M K +P+ V +VL+AC H+G++ EG + F M + P ++HY
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY 550
Query: 575 ACMVDLLARAGNLKEALDFIDKMP-VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELH 633
+CM+D+L RAG L EA + I + P + C LH E LG+ R ++E +
Sbjct: 551 SCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENY 610
Query: 634 PDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
PD A Y+++ NLYAS W ++VR +K+ GL K PGCS +E+
Sbjct: 611 PDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/470 (37%), Positives = 260/470 (55%), Gaps = 4/470 (0%)
Query: 209 EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLL 268
E + L+ M + F+ ++ +C L G+ +H +V K G F+ T+L+
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 269 NMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL 328
+MY KCG + DARKVF+E S +L V + A+I GY+ A +F G+
Sbjct: 96 SMYCKCGLVADARKVFEENPQSS-QLS-VCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 329 PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYV 388
+ +G LHG VK GL V N+ I MY KC V R +
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 389 FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA 448
F+ K +++WN+ ISG +Q+G AY+ LE++++M+S P D T+V VLS+CA LGA
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP-DPFTLVSVLSSCAHLGA 272
Query: 449 LPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMIS 508
+G + +G V +++V A ++ YA+CG+ AR VFD M K+ V+W+AMI
Sbjct: 273 KKIGHEVGKLVESNGFVP-NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 509 GYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
YGM G G + LF DM+K P+ VF VL+ACSHSG+ +G LF M RE
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 391
Query: 569 PSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRR 628
P +HY+C+VDLL RAG L EA++FI+ MPV+P +V+GA L C +H ++ E+A +
Sbjct: 392 PGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAK 451
Query: 629 MLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
++E P+ YYVL+SN+Y+ + ++R M+++R K PG S VE
Sbjct: 452 VIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 188/415 (45%), Gaps = 24/415 (5%)
Query: 7 SLFHSSKSLIQ--FRSLSSYIAFTLPHPPTLYLSPICKNID---TVKKFHASLIVHGFPG 61
SLF S SL + RS SS AF+ P ++ C ++ + ++ H + G
Sbjct: 32 SLFSESISLYRSMLRSGSSPDAFSFP-----FILKSCASLSLPVSGQQLHCHVTKGGCET 86
Query: 62 D----TKLLSLYASFGFLRHARRLFDHLPSPNLHS--FKAMLRWYFLNNLHSDVVSFYHL 115
+ T L+S+Y G + AR++F+ P + S + A++ Y N+ +D +
Sbjct: 87 EPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRR 146
Query: 116 TRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCG 174
+ T G D V ++ C+ + LH +K G S+ VLN + Y KCG
Sbjct: 147 MKET-GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCG 205
Query: 175 HVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVT 234
V + R++FDE+ + +++W ++ Y QN A + L L+ +M+ V + FT+ S+++
Sbjct: 206 SVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLS 265
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
+C LG+ G V V +G N F++ + ++MY +CG++ AR VFD M
Sbjct: 266 SCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK---- 321
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
LVSWTAMI Y G L LF D GI P+ G+ L
Sbjct: 322 SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 355 GLVVKCGLFDNTPVR-NALIDMYAKCHLVSDARYVFET-TVQKDVVSWNSFISGC 407
+ + + P + L+D+ + + +A E+ V+ D W + + C
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGAC 436
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/503 (35%), Positives = 275/503 (54%), Gaps = 13/503 (2%)
Query: 186 IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG 245
+ + +V SW S+ ++ + E L F+ MR+ + + + AC+ L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
K H G + F++++L+ MY CG + DARKVFDE+ + ++VSWT+MI G
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI----PKRNIVSWTSMIRG 151
Query: 306 YSQRGHPLKALELFTD------RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
Y G+ L A+ LF D + + + + +H V+K
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 360 CGLFDNTPVRNALIDMYAKCHL--VSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEAL 417
G V N L+D YAK V+ AR +F+ V KD VS+NS +S AQSG + EA
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
E+F+R+ +A+T+ VL A + GAL +G IH ++ GL + VGT++++
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED-DVIVGTSIID 330
Query: 478 FYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVV 537
Y KCG ++AR FD M KN +W+AMI+GYGM G ++ LF M+ PN +
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 538 FTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
F SVLAACSH+G+ EG R F+ M P ++HY CMVDLL RAG L++A D I +M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 598 PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVK 657
++P ++ + L C +H EL E+++ R+ EL YY+L+S++YA GRW V+
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 658 QVREMIKQRGLNKVPGCSLVEID 680
+VR ++K RGL K PG SL+E++
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELN 533
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 170/332 (51%), Gaps = 21/332 (6%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIA 187
F +KACS L D+ + H G SD FV + L+ YS CG + ARKVFDEI
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND---------FTVGSLVTACTK 238
+RN+VSWTSM Y N A++ + LF + VD ND + S+++AC++
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDL---LVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 239 LGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGD--IGDARKVFDEMLTSDDELDL 296
+ + + +H +V+K G + +LL+ Y K G+ + ARK+FD+++ + D
Sbjct: 196 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV----DKDR 251
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDRNWAGILP-NXXXXXXXXXXXXXXXXXXMGMLLHG 355
VS+ +++ Y+Q G +A E+F ++ N +G +H
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
V++ GL D+ V ++IDMY KC V AR F+ K+V SW + I+G G A +
Sbjct: 312 QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAK 371
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACASLG 447
ALE+F M +S P+ +T V VL+AC+ G
Sbjct: 372 ALELFPAM-IDSGVRPNYITFVSVLAACSHAG 402
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 155/296 (52%), Gaps = 17/296 (5%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K+ H V G+ D + L+ +Y++ G L AR++FD +P N+ S+ +M+R Y LN
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 104 NLHSDVVSFYH-----LTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS 158
D VS + F D + V+ ACS + +H VIK G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 159 DGF-VLNGLVDAYSKCGH--VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFN 215
G V N L+DAY+K G V ARK+FD+I +++ VS+ S+ Y Q+ + E +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 216 RM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC 274
R+ + V N T+ +++ A + G+L GK +H V++ G+ + + TS+++MY KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 275 GDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
G + ARK FD M ++ SWTAMI GY GH KALELF +G+ PN
Sbjct: 336 GRVETARKAFDRMKNK----NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 97/168 (57%), Gaps = 12/168 (7%)
Query: 386 RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
RYV +T DV SWNS I+ A+SG + EAL F MR S P + + + AC+S
Sbjct: 34 RYVDKT----DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS-SFPCAIKACSS 88
Query: 446 LGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSA 505
L + G H A G S I+V +AL+ Y+ CG + AR VFD + ++N V+W++
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQS-DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 506 MISGYGMQGDGVGSIALFRDMLKEECEPNEVVF------TSVLAACSH 547
MI GY + G+ + +++LF+D+L +E + ++ +F SV++ACS
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 293/553 (52%), Gaps = 9/553 (1%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAE 188
FS +L+ C + R + + H++KSG + LVDA KCG + AR+VFD ++E
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWV 248
R++V+W S+ +++ + E + ++ M V +++T+ S+ A + L + +
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 249 HGYVVKSGIHV-NSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
HG V G+ V N F+ ++L++MYVK G +A+ V D + +E D+V TA+IVGYS
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV----EEKDVVLITALIVGYS 243
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
Q+G +A++ F + PN G L+HGL+VK G
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES 427
+ +L+ MY +C LV D+ VF+ + VSW S ISG Q+G AL F++M +S
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKS 487
P++ T+ L C++L G IH K G Y G+ L++ Y KCG +
Sbjct: 364 I-KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF-DRDKYAGSGLIDLYGKCGCSDM 421
Query: 488 ARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSH 547
AR+VFD + E + ++ + MI Y G G ++ LF M+ +PN+V SVL AC++
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Query: 548 SGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFG 607
S +V EG LF R+ + + HYACMVDLL RAG L+EA + + + P + ++
Sbjct: 482 SRLVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWR 539
Query: 608 AYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRG 667
L C +H + E+ E R++LE+ P +L+SNLYAS G+W V +++ +K
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMK 599
Query: 668 LNKVPGCSLVEID 680
L K P S VEI+
Sbjct: 600 LKKNPAMSWVEIN 612
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 222/473 (46%), Gaps = 12/473 (2%)
Query: 42 KNIDTVKKFHASLIVHGFPGD---TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLR 98
++I +K A ++ GFP + +KL+ G + +AR++FD + ++ ++ +++
Sbjct: 79 RSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIA 138
Query: 99 WYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-- 156
+ + + V Y L T D S V KA S+L +A R H + G
Sbjct: 139 YLIKHRRSKEAVEMYRLM-ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLE 197
Query: 157 PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNR 216
S+ FV + LVD Y K G A+ V D + E++VV T++ V Y Q E ++ F
Sbjct: 198 VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 217 MREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGD 276
M V N++T S++ +C L + GK +HG +VKSG TSLL MY++C
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 277 IGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXX 336
+ D+ +VF + + VSWT++I G Q G AL F I PN
Sbjct: 318 VDDSLRVFKCIEYPNQ----VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSS 373
Query: 337 XXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKD 396
G +HG+V K G + + LID+Y KC AR VF+T + D
Sbjct: 374 ALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVD 433
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
V+S N+ I AQ+G EAL++F+RM + P D VTV+ VL AC + + G +
Sbjct: 434 VISLNTMIYSYAQNGFGREALDLFERMINLGLQPND-VTVLSVLLACNNSRLVEEGCELF 492
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISG 509
KD ++ + + +++ + G + A M+ + + V W ++S
Sbjct: 493 DSFRKDKIMLTNDHYA-CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/611 (30%), Positives = 323/611 (52%), Gaps = 19/611 (3%)
Query: 79 RRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSE 138
R++FD++ N+ ++ ++ WY +++ + + + V F V A S
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM-MRMEVKPSPVSFVNVFPAVSI 226
Query: 139 LRDVVQAARLHCHVIKSGPS---DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWT 195
R + +A + ++K G D FV++ + Y++ G + S+R+VFD ERN+ W
Sbjct: 227 SRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 196 SMFVAYVQNDCAVEGLRLF-NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK 254
+M YVQNDC VE + LF + + ++ T +A + L + G+ HG+V K
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
+ + + SL+ MY +CG + + VF M E D+VSW MI + Q G +
Sbjct: 347 NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM----RERDVVSWNTMISAFVQNGLDDE 402
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL-FDNTPVRNALI 373
L L + G + +G H +++ G+ F+ + + LI
Sbjct: 403 GLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG--MNSYLI 460
Query: 374 DMYAKCHLVSDARYVFETT--VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
DMY+K L+ ++ +FE + ++D +WNS ISG Q+G + +F++M ++ P
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRP- 519
Query: 432 DAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
+AVTV +L AC+ +G++ LG +H F+++ L +++V +AL++ Y+K G K A +
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYL-DQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 492 FDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMV 551
F E+N+VT++ MI GYG G G +I+LF M + +P+ + F +VL+ACS+SG++
Sbjct: 579 FSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLI 638
Query: 552 GEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS-VFGAYL 610
EG ++F M N PS +HY C+ D+L R G + EA +F+ + + ++ ++G+ L
Sbjct: 639 DEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLL 698
Query: 611 HGCGLHSEFELGEVAIRRMLELHPDQ--ACYYVLVSNLYASDGRWGMVKQVREMIKQRGL 668
C LH E EL E R+ + + + Y VL+SN+YA + +W V +VR ++++GL
Sbjct: 699 GSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGL 758
Query: 669 NKVPGCSLVEI 679
K G S +EI
Sbjct: 759 KKEVGRSGIEI 769
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 173/609 (28%), Positives = 288/609 (47%), Gaps = 42/609 (6%)
Query: 60 PGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYT 119
P LS G + AR+LFD +P P + ++ + NNL + + FY + T
Sbjct: 40 PSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKT 99
Query: 120 LGFFH-DLVVFSIVLKACSELRDVVQAARLHCHVIKS-GPSDGFVLNGLVDAYSKCGHVC 177
F + D +S LKAC+E +++ +HCH+I+ S V N L++ Y C +
Sbjct: 100 APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAP 159
Query: 178 S------ARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGS 231
RKVFD + +NVV+W ++ YV+ E R F M V + + +
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHV--NSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
+ A + S+ + +G ++K G + F+ +S ++MY + GDI +R+VFD +
Sbjct: 220 VFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDR-NWAGILPNXXXXXXXXXXXXXXXXXX 348
+ E+ W MI Y Q ++++ELF + I+ +
Sbjct: 280 RNIEV----WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVE 335
Query: 349 MGMLLHGLVVKCGLFDNTP--VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISG 406
+G HG V K F P + N+L+ MY++C V + VF + ++DVVSWN+ IS
Sbjct: 336 LGRQFHGFVSKN--FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISA 393
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
Q+G E L + M+ + F D +TV +LSA ++L +G HAF ++ G+
Sbjct: 394 FVQNGLDDEGLMLVYEMQKQGFK-IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF 452
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMG--EKNAVTWSAMISGYGMQGDGVGSIALFR 524
+ + L++ Y+K G + ++ +F+G G E++ TW++MISGY G + +FR
Sbjct: 453 EGM--NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 525 DMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCREL----NFVPSMKHYACMVDL 580
ML++ PN V S+L ACS G V G +L R+ FV S +VD+
Sbjct: 511 KMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVAS-----ALVDM 565
Query: 581 LARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELH-----PD 635
++AG +K A D + + V+ + + G G H +GE AI L + PD
Sbjct: 566 YSKAGAIKYAEDMFSQTKERNSVT-YTTMILGYGQHG---MGERAISLFLSMQESGIKPD 621
Query: 636 QACYYVLVS 644
+ ++S
Sbjct: 622 AITFVAVLS 630
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 13/275 (4%)
Query: 385 ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES-FSPPDAVTVVGVLSAC 443
AR +F+ + V WN+ I G + +EAL + RM+ + F+ DA T L AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 444 ASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKS------ARMVFDGMGE 497
A L G ++H ++ L + S V +L+N Y C +A R VFD M
Sbjct: 118 AETKNLKAGKAVHCHLIR-CLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 498 KNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRL 557
KN V W+ +IS Y G + F M++ E +P+ V F +V A S S + + +
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 558 FHMMCRELN-FVPSMKHYACMVDLLARAGNLKEALDFID---KMPVQPGVSVFGAYLHGC 613
+ +M + + +V + + + + A G+++ + D + ++ ++ G Y+
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 614 GLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYA 648
L EL AI E+ D+ Y + S + A
Sbjct: 297 CLVESIELFLEAIGSK-EIVSDEVTYLLAASAVSA 330
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/619 (30%), Positives = 326/619 (52%), Gaps = 16/619 (2%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T ++ LYA G + A +F +P+P++ S+ ML Y +N + + R++
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVE 348
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARK 181
++ V S V+ AC V +A+++H V KSG D V L+ YSK G + + +
Sbjct: 349 INNCTVTS-VISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQ 407
Query: 182 VF---DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTK 238
VF D+I +N+V+ M ++ Q+ + +RLF RM + + ++F+V SL++
Sbjct: 408 VFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV--- 462
Query: 239 LGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVS 298
L L+ GK VHGY +KSG+ ++ + +SL +Y KCG + ++ K+F + D+
Sbjct: 463 LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN----AC 518
Query: 299 WTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
W +MI G+++ G+ +A+ LF++ G P+ G +HG +
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALE 418
+ G+ + +AL++MY+KC + AR V++ + D VS +S ISG +Q G +
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL 638
Query: 419 MFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNF 478
+F+ M F+ D+ + +L A A LG+ +HA+ K GL + VG++LL
Sbjct: 639 LFRDMVMSGFTM-DSFAISSILKAAALSDESSLGAQVHAYITKIGLCT-EPSVGSSLLTM 696
Query: 479 YAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVF 538
Y+K G F + + + W+A+I+ Y G ++ ++ M ++ +P++V F
Sbjct: 697 YSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTF 756
Query: 539 TSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP 598
VL+ACSH G+V E + M ++ P +HY CMVD L R+G L+EA FI+ M
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMH 816
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQ 658
++P V+G L C +H E ELG+VA ++ +EL P A Y+ +SN+ A G W V++
Sbjct: 817 IKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEE 876
Query: 659 VREMIKQRGLNKVPGCSLV 677
R+++K G+ K PG S V
Sbjct: 877 TRKLMKGTGVQKEPGWSSV 895
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 182/641 (28%), Positives = 296/641 (46%), Gaps = 51/641 (7%)
Query: 62 DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLG 121
++ L+ +++ A ++F S N++ + ++ N + V +H +G
Sbjct: 188 ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFH--EMCVG 245
Query: 122 FFH-DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSAR 180
F D +S VL AC+ L + + VIK G D FV +VD Y+KCGH+ A
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAM 305
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
+VF I +VVSWT M Y +++ A L +F MR V+ N+ TV S+++AC +
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
+ + VH +V KSG +++S +A +L++MY K GDI + +VF+++ DD
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL---DDIQRQNIVN 422
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
MI +SQ P KA+ LFT G+ + +G +HG +K
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTD---EFSVCSLLSVLDCLNLGKQVHGYTLKS 479
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
GL + V ++L +Y+KC + ++ +F+ KD W S ISG + G EA+ +F
Sbjct: 480 GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLF 539
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
M + S PD T+ VL+ C+S +LP G IH + L+ G + + +G+AL+N Y+
Sbjct: 540 SEMLDDGTS-PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG-IDKGMDLGSALVNMYS 597
Query: 481 KCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
KCG K AR V+D + E + V+ S++ISGY G LFRDM+ + +S
Sbjct: 598 KCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISS 657
Query: 541 VLAACSHS----------------GMVGE---GSRLFHMM---------CRELNFV--PS 570
+L A + S G+ E GS L M C+ + + P
Sbjct: 658 ILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 571 MKHYACMVDLLARAGNLKEALDFIDKMP---VQPGVSVFGAYLHGC---GLHSEFELGEV 624
+ + ++ A+ G EAL + M +P F L C GL E
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 625 AIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQ 665
++ + + P+ Y +V L GR G +++ I
Sbjct: 778 SMVKDYGIEPENRHYVCMVDAL----GRSGRLREAESFINN 814
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 172/601 (28%), Positives = 282/601 (46%), Gaps = 23/601 (3%)
Query: 38 SPICKNIDTVKKFHASLIV-HGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHS 92
S +C N+ T K A L+ + P D LLS Y++ G + A +LFD +P P++ S
Sbjct: 59 SRLC-NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVS 117
Query: 93 FKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHV 152
M+ Y + L + + F+ + LGF + + + V+ ACS L+ + + + CH
Sbjct: 118 CNIMISGYKQHRLFEESLRFFSKMHF-LGFEANEISYGSVISACSALQAPLFSELVCCHT 176
Query: 153 IKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
IK G V + L+D +SK A KVF + NV W ++ ++N
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
LF+ M GF + +T S++ AC L L GK V V+K G + F+ T+++++Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLY 295
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
KCG + +A +VF + +VSWT M+ GY++ ALE+F + +G+ N
Sbjct: 296 AKCGHMAEAMEVFSRIPNP----SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE- 390
+H V K G + ++ V ALI MY+K + + VFE
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 391 -TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
+Q+ + N I+ +QS +A+ +F RM E D +V +LS L L
Sbjct: 412 LDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLR-TDEFSVCSLLSV---LDCL 466
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISG 509
LG +H + LK GLV + VG++L Y+KCG + + +F G+ K+ W++MISG
Sbjct: 467 NLGKQVHGYTLKSGLV-LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 510 YGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVP 569
+ G +I LF +ML + P+E +VL CS + G + H
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI-HGYTLRAGIDK 584
Query: 570 SMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRM 629
M + +V++ ++ G+LK A D++P VS + + G H + G + R M
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC-SSLISGYSQHGLIQDGFLLFRDM 643
Query: 630 L 630
+
Sbjct: 644 V 644
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 153/595 (25%), Positives = 257/595 (43%), Gaps = 61/595 (10%)
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSA 179
FF+D ++ S L ++ L H+++ P D F+ L+ YS G + A
Sbjct: 52 FFND--------QSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADA 103
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
K+FD I + +VVS M Y Q+ E LR F++M + N+ + GS+++AC+ L
Sbjct: 104 AKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSAL 163
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
+ + V + +K G + ++L++++ K DA KVF + L++ ++ W
Sbjct: 164 QAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSA----NVYCW 219
Query: 300 TAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
+I G + + +LF + P+ G ++ V+K
Sbjct: 220 NTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK 279
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
CG ++ V A++D+YAKC +++A VF VVSW +SG +S A+ ALE+
Sbjct: 280 CGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEI 338
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFY 479
F+ MR S + TV V+SAC + S +HA+ K G S V AL++ Y
Sbjct: 339 FKEMR-HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS-SVAAALISMY 396
Query: 480 AKCGDAKSARMVF---DGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
+K GD + VF D + +N V + MI+ + +I LF ML+E +E
Sbjct: 397 SKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEF 454
Query: 537 VFTSVLAACS-------------HSGMVGE---GSRLFHMMCRELNFVPSMKHY------ 574
S+L+ SG+V + GS LF + + + S K +
Sbjct: 455 SVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514
Query: 575 -----ACMVDLLARAGNLKEALDFIDKM---PVQPGVSVFGAYLHGCGLHSEFELGE--- 623
A M+ G L+EA+ +M P S A L C H G+
Sbjct: 515 DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIH 574
Query: 624 -VAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
+R ++ D V N+Y+ G + +QV + + + L+ V SL+
Sbjct: 575 GYTLRAGIDKGMDLGSALV---NMYSKCGSLKLARQVYDRLPE--LDPVSCSSLI 624
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/594 (31%), Positives = 306/594 (51%), Gaps = 43/594 (7%)
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVD--AYSKCGHVCSAR 180
H V+ + +L + + ++ ++ +I +G D F + L+ A S+ ++ +
Sbjct: 48 HSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSV 107
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDG--NDFTVGSLVTACT 237
K+ I N+ SW + +++ E L+ +M R G + + FT L C
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 238 KLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
L G + G+V+K + + S + + ++M+ CGD+ +ARKVFDE D LV
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD----LV 223
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLV 357
SW +I GY + G KA+ ++ G+ P+ G + V
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 358 VKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE----------TTV-------------- 393
+ GL P+ NAL+DM++KC + +AR +F+ TT+
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 394 -------QKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
+KDVV WN+ I G Q+ +AL +FQ M++ S + PD +T++ LSAC+ L
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT-SNTKPDEITMIHCLSACSQL 402
Query: 447 GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAM 506
GAL +G IH + K L S ++ +GT+L++ YAKCG+ A VF G+ +N++T++A+
Sbjct: 403 GALDVGIWIHRYIEKYSL-SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 507 ISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELN 566
I G + GD +I+ F +M+ P+E+ F +L+AC H GM+ G F M N
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN 521
Query: 567 FVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAI 626
P +KHY+ MVDLL RAG L+EA ++ MP++ +V+GA L GC +H ELGE A
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAA 581
Query: 627 RRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+++LEL P + YVL+ +Y W K+ R M+ +RG+ K+PGCS +E++
Sbjct: 582 KKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVN 635
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 143/551 (25%), Positives = 244/551 (44%), Gaps = 52/551 (9%)
Query: 7 SLFHSSKSLIQFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLL 66
SL H I + S S++ H P L L CK + +K+ A +I++G D
Sbjct: 33 SLPHHRDKPINWNSTHSFVL----HNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFAS 88
Query: 67 SLYASFGFLRHAR------RLFDHLPSPNLHSFKAMLRWYFLN-NLHSDVVSFYHLTRYT 119
S +F L +R ++ + +PN+ S+ +R + + N + + + R+
Sbjct: 89 SRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHG 148
Query: 120 LGFFH-DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVC 177
D + ++ K C++LR + HV+K V N + ++ CG +
Sbjct: 149 CCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDME 208
Query: 178 SARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACT 237
+ARKVFDE R++VSW + Y + A + + ++ M V +D T+ LV++C+
Sbjct: 209 NARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 268
Query: 238 KLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFD------------ 285
LG L++GK + YV ++G+ + L +L++M+ KCGDI +AR++FD
Sbjct: 269 MLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTT 328
Query: 286 ---------------EMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
++ +E D+V W AMI G Q AL LF + + P+
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 388
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE 390
+G+ +H + K L N + +L+DMYAKC +S+A VF
Sbjct: 389 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFH 448
Query: 391 TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALP 450
++ +++ + I G A G A A+ F M + PD +T +G+LSAC G +
Sbjct: 449 GIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA-PDEITFIGLLSACCHGGMIQ 507
Query: 451 LGSSIHA-----FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWS 504
G + F L L SI V + + G + A + + M E +A W
Sbjct: 508 TGRDYFSQMKSRFNLNPQLKHYSIMV-----DLLGRAGLLEEADRLMESMPMEADAAVWG 562
Query: 505 AMISGYGMQGD 515
A++ G M G+
Sbjct: 563 ALLFGCRMHGN 573
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 284/552 (51%), Gaps = 8/552 (1%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL--NGLVDAYSKCGHVCSARKVFDEI 186
+ + +AC ELR + LH ++ G + VL N ++ Y +C + A K+FDE+
Sbjct: 86 YQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM 144
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
+E N VS T+M AY + + + LF+ M +L+ + +L G+
Sbjct: 145 SELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGR 204
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+H +V+++G+ N+ + T ++NMYVKCG + A++VFD+M V+ T ++VGY
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP----VACTGLMVGY 260
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
+Q G AL+LF D G+ + +G +H V K GL
Sbjct: 261 TQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEV 320
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
V L+D Y KC A F+ + + VSW++ ISG Q EA++ F+ +RS+
Sbjct: 321 SVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK 380
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
+ S ++ T + AC+ L +G +HA A+K L+ S Y +AL+ Y+KCG
Sbjct: 381 NASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG-SQYGESALITMYSKCGCLD 439
Query: 487 SARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
A VF+ M + V W+A ISG+ G+ ++ LF M+ +PN V F +VL ACS
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 499
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
H+G+V +G M R+ N P++ HY CM+D+ AR+G L EAL F+ MP +P +
Sbjct: 500 HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSW 559
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQR 666
+L GC H ELGE+A + +L P+ YVL NLY G+W ++ +++ +R
Sbjct: 560 KCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNER 619
Query: 667 GLNKVPGCSLVE 678
L K CS ++
Sbjct: 620 MLKKELSCSWIQ 631
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 227/506 (44%), Gaps = 46/506 (9%)
Query: 13 KSLIQFRSLSSYIAFTLPHPPTLYLSPI------CKNIDTVKKFHASLIVHGFPGDTKLL 66
+SL R L + + +P L + + C++++ K + T ++
Sbjct: 97 RSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMI 156
Query: 67 SLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDL 126
S YA G L A LF + + +M
Sbjct: 157 SAYAEQGILDKAVGLFSGMLASGDKPPSSM------------------------------ 186
Query: 127 VVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDE 185
++ +LK+ R + ++H HVI++G S+ + G+V+ Y KCG + A++VFD+
Sbjct: 187 --YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 186 IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG 245
+A + V+ T + V Y Q A + L+LF + V+ + F ++ AC L L+ G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
K +H V K G+ + T L++ Y+KC A + F E+ +D VSW+A+I G
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND----VSWSAIISG 360
Query: 306 YSQRGHPLKALELFTD-RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
Y Q +A++ F R+ + N +G +H +K L
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
+ +ALI MY+KC + DA VFE+ D+V+W +FISG A G+A EAL +F++M
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
S P++VT + VL+AC+ G + G L+ V+ +I +++ YA+ G
Sbjct: 481 SCGMK-PNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 485 AKSARMVFDGMG-EKNAVTWSAMISG 509
A M E +A++W +SG
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 183/390 (46%), Gaps = 19/390 (4%)
Query: 32 PPTLYLSPICKNI------DTVKKFHASLIVHGFPGDTKL----LSLYASFGFLRHARRL 81
PP+ + + K++ D ++ HA +I G +T + +++Y G+L A+R+
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 82 FDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRD 141
FD + + ++ Y D + + + T G D VFS+VLKAC+ L +
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLF-VDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 142 VVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVA 200
+ ++H V K G S+ V LVD Y KC SA + F EI E N VSW+++
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 201 YVQNDCAVEGLRLFNRMREGFVDG-NDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHV 259
Y Q E ++ F +R N FT S+ AC+ L + G VH +K +
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 260 NSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF 319
+ + ++L+ MY KCG + DA +VF+ M D D+V+WTA I G++ G+ +AL LF
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESM----DNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 320 TDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM-LLHGLVVKCGLFDNTPVRNALIDMYAK 378
G+ PN G L ++ K + + +ID+YA+
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 379 CHLVSDA-RYVFETTVQKDVVSWNSFISGC 407
L+ +A +++ + D +SW F+SGC
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGC 566
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 197/567 (34%), Positives = 304/567 (53%), Gaps = 27/567 (4%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPSDGFV-LNGLVDAYSKCGHVCS---ARKVFD 184
+ +L R +V+ +LH +IKS + L+ L+D + C + AR VF+
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 185 EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLH 243
I +V W SM Y + + L + M R+G+ + FT ++ AC+ L +
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGY-SPDYFTFPYVLKACSGLRDIQ 124
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
G VHG+VVK+G VN +++T LL+MY+ CG++ +VF+++ + ++V+W ++I
Sbjct: 125 FGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI----PQWNVVAWGSLI 180
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
G+ A+E F + G+ N G HG + G F
Sbjct: 181 SGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG-F 239
Query: 364 D---------NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
D N + +LIDMYAKC + ARY+F+ ++ +VSWNS I+G +Q+G A
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTA 474
EAL MF M +P D VT + V+ A G LG SIHA+ K G V + V A
Sbjct: 300 EALCMFLDMLDLGIAP-DKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV-CA 357
Query: 475 LLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML-KEECEP 533
L+N YAK GDA+SA+ F+ + +K+ + W+ +I G G G ++++F+ M K P
Sbjct: 358 LVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATP 417
Query: 534 NEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDF 593
+ + + VL ACSH G+V EG R F M P+++HY CMVD+L+RAG +EA
Sbjct: 418 DGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERL 477
Query: 594 IDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQ--ACYYVLVSNLYASDG 651
+ MPV+P V+++GA L+GC +H EL + IR M+ P++ + YVL+SN+YA G
Sbjct: 478 VKTMPVKPNVNIWGALLNGCDIHENLELTD-RIRSMVA-EPEELGSGIYVLLSNIYAKAG 535
Query: 652 RWGMVKQVREMIKQRGLNKVPGCSLVE 678
RW VK +RE +K + ++KV G S VE
Sbjct: 536 RWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/498 (29%), Positives = 241/498 (48%), Gaps = 26/498 (5%)
Query: 31 HPPTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGF-------LRHARRLFD 83
+ P L C+++ + + H +I + LS F L +AR +F+
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 84 HLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVV 143
+ P+++ + +M+R Y N+ + D ++ G+ D F VLKACS LRD+
Sbjct: 66 SIDCPSVYIWNSMIRGYS-NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQ 124
Query: 144 QAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYV 202
+ +H V+K+G + +V L+ Y CG V +VF++I + NVV+W S+ +V
Sbjct: 125 FGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFV 184
Query: 203 QNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYV--------VK 254
N+ + + F M+ V N+ + L+ AC + + GKW HG++ +
Sbjct: 185 NNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQ 244
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
S + N LATSL++MY KCGD+ AR +FD M E LVSW ++I GYSQ G +
Sbjct: 245 SKVGFNVILATSLIDMYAKCGDLRTARYLFDGM----PERTLVSWNSIITGYSQNGDAEE 300
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALID 374
AL +F D GI P+ +G +H V K G + + AL++
Sbjct: 301 ALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVN 360
Query: 375 MYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV 434
MYAK A+ FE +KD ++W I G A G EAL +FQRM+ + + PD +
Sbjct: 361 MYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGI 420
Query: 435 TVVGVLSACASLGALPLGSSIHAFALKD--GLVSCSIYVGTALLNFYAKCGDAKSARMVF 492
T +GVL AC+ +G + G A ++D GL + G +++ ++ G + A +
Sbjct: 421 TYLGVLYACSHIGLVEEGQRYFA-EMRDLHGLEPTVEHYG-CMVDILSRAGRFEEAERLV 478
Query: 493 DGMGEK-NAVTWSAMISG 509
M K N W A+++G
Sbjct: 479 KTMPVKPNVNIWGALLNG 496
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 307 bits (787), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 322/636 (50%), Gaps = 18/636 (2%)
Query: 54 LIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFY 113
L+ F G+ L+S Y + GF+ A +LFD +P NL S+ +M+R + N + SF
Sbjct: 218 LVEDVFVGNA-LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE--SFL 274
Query: 114 HLTRYTL-----GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLN-GLV 167
L F D+ VL C+ R++ +H +K VLN L+
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM 334
Query: 168 DAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD--GN 225
D YSKCG + +A+ +F +NVVSW +M + + +M G D +
Sbjct: 335 DMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKAD 394
Query: 226 DFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFD 285
+ T+ + V C L K +H Y +K N +A + + Y KCG + A++VF
Sbjct: 395 EVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 454
Query: 286 EMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXX 345
+ + + SW A+I G++Q P +L+ +G+LP+
Sbjct: 455 GIRSKT----VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK 510
Query: 346 XXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFIS 405
+G +HG +++ L + V +++ +Y C + + +F+ K +VSWN+ I+
Sbjct: 511 SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVIT 570
Query: 406 GCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLV 465
G Q+G AL +F++M ++++ V AC+ L +L LG HA+ALK L+
Sbjct: 571 GYLQNGFPDRALGVFRQMVLYGIQLC-GISMMPVFGACSLLPSLRLGREAHAYALKH-LL 628
Query: 466 SCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRD 525
++ +L++ YAK G + VF+G+ EK+ +W+AMI GYG+ G +I LF +
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 526 MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAG 585
M + P+++ F VL AC+HSG++ EG R M P++KHYAC++D+L RAG
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 586 NLKEALDFI-DKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVS 644
L +AL + ++M + V ++ + L C +H E+GE ++ EL P++ YVL+S
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 808
Query: 645 NLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
NLYA G+W V++VR+ + + L K GCS +E++
Sbjct: 809 NLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 271/579 (46%), Gaps = 20/579 (3%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T+++++YA G +R +FD L S NL + A++ Y N L+ +V+ + T
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARK 181
D + V+KAC+ + DV +H V+K+G D FV N LV Y G V A +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDF-TVGSLVT---ACT 237
+FD + ERN+VSW SM + N + E L M E DG V +LVT C
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 238 KLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
+ + GK VHG+ VK + L +L++MY KCG I +A+ +F ++ ++V
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF----KMNNNKNVV 359
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGML--LHG 355
SW M+ G+S G ++ G + L LH
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
+K N V NA + YAKC +S A+ VF K V SWN+ I G AQS
Sbjct: 420 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 479
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTAL 475
+L+ +M+ PD+ TV +LSAC+ L +L LG +H F +++ L ++V ++
Sbjct: 480 SLDAHLQMKISGL-LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER-DLFVYLSV 537
Query: 476 LNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNE 535
L+ Y CG+ + + +FD M +K+ V+W+ +I+GY G ++ +FR M+ +
Sbjct: 538 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC-MVDLLARAGNLKEALDFI 594
+ V ACS + G + L + AC ++D+ A+ G++ ++
Sbjct: 598 ISMMPVFGACSLLPSLRLGREAHAYALKHL--LEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 595 DKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELH 633
+ + + S + A + G G+H L + AI+ E+
Sbjct: 656 NGLKEKSTAS-WNAMIMGYGIHG---LAKEAIKLFEEMQ 690
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 200/428 (46%), Gaps = 21/428 (4%)
Query: 131 IVLKACSELRDVVQAARLHCHVIKSGP--SDGFVLNGLVDAYSKCGHVCSARKVFDEIAE 188
++L+A + +D+ ++H V S +D + ++ Y+ CG +R VFD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND-----FTVGSLVTACTKLGSLH 243
+N+ W ++ +Y +N+ E L F M + D FT ++ AC + +
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEM----ISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
G VHG VVK+G+ + F+ +L++ Y G + DA ++FD M E +LVSW +MI
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM----PERNLVSWNSMI 260
Query: 304 VGYSQRGHPLKAL----ELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
+S G ++ E+ + +P+ +G +HG VK
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
L + NAL+DMY+KC +++A+ +F+ K+VVSWN+ + G + G + ++
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 420 FQRMRSESFS-PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNF 478
++M + D VT++ + C LP +H ++LK V + V A +
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANAFVAS 439
Query: 479 YAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVF 538
YAKCG A+ VF G+ K +W+A+I G+ D S+ M P+
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 539 TSVLAACS 546
S+L+ACS
Sbjct: 500 CSLLSACS 507
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 140/306 (45%), Gaps = 16/306 (5%)
Query: 349 MGMLLHGLVVKCGLFDNTPVR-NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGC 407
MG +H LV N V +I MYA C D+R+VF+ K++ WN+ IS
Sbjct: 102 MGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY 161
Query: 408 AQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSC 467
+++ E LE F M S + PD T V+ ACA + + +G ++H +K GLV
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE- 220
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML 527
++VG AL++FY G A +FD M E+N V+W++MI + G S L +M+
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 528 KEECE----PNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLAR 583
+E + P+ +VL C+ +G G + H +L + ++D+ ++
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGV-HGWAVKLRLDKELVLNNALMDMYSK 339
Query: 584 AGNLKEALDFIDKMPVQPGV----SVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACY 639
G + A I KM V ++ G + H F++ +R+ML D
Sbjct: 340 CGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV----LRQMLAGGEDVKAD 394
Query: 640 YVLVSN 645
V + N
Sbjct: 395 EVTILN 400
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 254/450 (56%), Gaps = 8/450 (1%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
+L+ AC +L G+ VH +++K+ ++L T LL Y KC + DARKV DEM
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM--- 113
Query: 291 DDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG 350
E ++VSWTAMI YSQ GH +AL +F + + PN +G
Sbjct: 114 -PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 351 MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQS 410
+HGL+VK + V ++L+DMYAK + +AR +FE ++DVVS + I+G AQ
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 411 GSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIY 470
G EALEMF R+ SE SP + VT +L+A + L L G H L+ L ++
Sbjct: 233 GLDEEALEMFHRLHSEGMSP-NYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV- 290
Query: 471 VGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE 530
+ +L++ Y+KCG+ AR +FD M E+ A++W+AM+ GY G G + LFR M E+
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 531 -CEPNEVVFTSVLAACSHSGMVGEGSRLFH-MMCRELNFVPSMKHYACMVDLLARAGNLK 588
+P+ V +VL+ CSH M G +F M+ E P +HY C+VD+L RAG +
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 589 EALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYA 648
EA +FI +MP +P V G+ L C +H ++GE RR++E+ P+ A YV++SNLYA
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 649 SDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
S GRW V VR M+ Q+ + K PG S ++
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 175/318 (55%), Gaps = 7/318 (2%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSARKVFDEI 186
+ +L AC + R + R+H H+IK+ P+ ++ L+ Y KC + ARKV DE+
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPAT-YLRTRLLIFYGKCDCLEDARKVLDEM 113
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
E+NVVSWT+M Y Q + E L +F M N+FT +++T+C + L GK
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+HG +VK + F+ +SLL+MY K G I +AR++F+ + E D+VS TA+I GY
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECL----PERDVVSCTAIIAGY 229
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
+Q G +ALE+F + G+ PN G H V++ L
Sbjct: 230 AQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA 289
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
++N+LIDMY+KC +S AR +F+ ++ +SWN+ + G ++ G E LE+F+ MR E
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 349
Query: 427 SFSPPDAVTVVGVLSACA 444
PDAVT++ VLS C+
Sbjct: 350 KRVKPDAVTLLAVLSGCS 367
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 138/258 (53%), Gaps = 6/258 (2%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T+LL Y L AR++ D +P N+ S+ AM+ Y S+ ++ + + G
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIK-SGPSDGFVLNGLVDAYSKCGHVCSARK 181
++ F+ VL +C + ++H ++K + S FV + L+D Y+K G + AR+
Sbjct: 151 PNEF-TFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
+F+ + ER+VVS T++ Y Q E L +F+R+ + N T SL+TA + L
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
L GK H +V++ + + L SL++MY KCG++ AR++FD M E +SW A
Sbjct: 270 LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM----PERTAISWNA 325
Query: 302 MIVGYSQRGHPLKALELF 319
M+VGYS+ G + LELF
Sbjct: 326 MLVGYSKHGLGREVLELF 343
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 57 HGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLT 116
H F G + LL +YA G ++ AR +F+ LP ++ S A++ Y L + + +H
Sbjct: 187 HIFVGSS-LLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGH 175
++ G + V ++ +L A S L + + HCHV++ P + N L+D YSKCG+
Sbjct: 246 -HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR-EGFVDGNDFTVGSLVT 234
+ AR++FD + ER +SW +M V Y ++ E L LF MR E V + T+ ++++
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHV 259
C+ HG + +G+++
Sbjct: 365 GCS-----------HGRMEDTGLNI 378
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 195/643 (30%), Positives = 332/643 (51%), Gaps = 23/643 (3%)
Query: 50 FHASLIVHG-------FPGDTKL----LSLYASFGFLRHARRLFDHLPSPNLHSFKAMLR 98
FH VHG F +T + + Y+ GFL+ A +FD +P ++ ++ A++
Sbjct: 141 FHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIIS 200
Query: 99 WYFLNNLHSDVVSFYHLTRYTLGFFHDL---VVFSIVLKACSELRDVVQAARLHCHVIKS 155
+ + N S+ Y ++ G D +ACS L + + LH +K+
Sbjct: 201 GH-VQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN 259
Query: 156 G-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLF 214
G S FV + + YSK G+ A F E+ + ++ SWTS+ + ++ E +F
Sbjct: 260 GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMF 319
Query: 215 NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC 274
M+ + + + L+ K+ + QGK HG+V++ ++S + SLL+MY K
Sbjct: 320 WEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKF 379
Query: 275 GDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXX 334
+ A K+F + +E + +W M+ GY + +K +ELF GI +
Sbjct: 380 ELLSVAEKLFCRI---SEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASA 436
Query: 335 XXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQ 394
+G LH VVK L V N+LID+Y K ++ A +F
Sbjct: 437 TSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEAD 495
Query: 395 KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
+V++WN+ I+ + +A+ +F RM SE+F P ++T+V +L AC + G+L G
Sbjct: 496 TNVITWNAMIASYVHCEQSEKAIALFDRMVSENF-KPSSITLVTLLMACVNTGSLERGQM 554
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
IH + + + ++ + AL++ YAKCG + +R +FD +K+AV W+ MISGYGM G
Sbjct: 555 IHRY-ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHG 613
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
D +IALF M + + +P F ++L+AC+H+G+V +G +LF M + + P++KHY
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHY 672
Query: 575 ACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP 634
+C+VDLL+R+GNL+EA + MP P ++G L C H EFE+G R + P
Sbjct: 673 SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDP 732
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
YY++++N+Y++ G+W ++ REM+++ G+ K G S+V
Sbjct: 733 QNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 175/664 (26%), Positives = 331/664 (49%), Gaps = 34/664 (5%)
Query: 15 LIQFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGD----TKLLSLYA 70
++ R LSS A + ++ L ++++++K +A +I G + +KL+S YA
Sbjct: 11 VVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYA 70
Query: 71 SFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFS 130
S+G + R+F + ++ + ++++ +F N ++ + F+ + G D
Sbjct: 71 SYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF-FSMLLSGQSPDHFTAP 129
Query: 131 IVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDA-----YSKCGHVCSARKVFDE 185
+V+ AC+EL +H V+K G GF N V A YSKCG + A VFDE
Sbjct: 130 MVVSACAELLWFHVGTFVHGLVLKHG---GFDRNTAVGASFVYFYSKCGFLQDACLVFDE 186
Query: 186 IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD---GNDFTVGSLVTACTKLGSL 242
+ +R+VV+WT++ +VQN + GL +M D N T+ AC+ LG+L
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
+G+ +HG+ VK+G+ + F+ +S+ + Y K G+ +A F E+ DE D+ SWT++
Sbjct: 247 KEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL---GDE-DMFSWTSI 302
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK-CG 361
I ++ G ++ ++F + G+ P+ G HG V++ C
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
D+T V N+L+ MY K L+S A +F + + + +WN+ + G + + +E+F
Sbjct: 363 SLDST-VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+++++ D+ + V+S+C+ +GA+ LG S+H + +K L +I V +L++ Y
Sbjct: 422 RKIQNLGI-EIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL-DLTISVVNSLIDLYG 479
Query: 481 KCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
K GD A +F + N +TW+AMI+ Y +IALF M+ E +P+ + +
Sbjct: 480 KMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ 600
+L AC ++G + G ++ H E ++ A ++D+ A+ G+L+++ + D +
Sbjct: 539 LLMACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 601 PGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSNLYASDGRWGMVKQ 658
V + + G G+H + E +M E + P + L+S + G+V+Q
Sbjct: 598 DAV-CWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA----GLVEQ 652
Query: 659 VREM 662
+++
Sbjct: 653 GKKL 656
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 201/630 (31%), Positives = 318/630 (50%), Gaps = 49/630 (7%)
Query: 66 LSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFF-- 123
+S Y G A R+F +P + S+ M+ Y N + L R
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE-------FELARKLFDEMPE 123
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVF 183
DLV +++++K R++ +A L + + D N ++ Y++ G V AR VF
Sbjct: 124 RDLVSWNVMIKGYVRNRNLGKARELFEIMPER---DVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVT-ACTKLGSL 242
D + E+N VSW ++ AYVQN E LF + RE + +LV+ C G +
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLF-KSRENW---------ALVSWNCLLGGFV 230
Query: 243 HQGKWVHGYVVKSGIHVNSFLA-TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
+ K V ++V ++ +++ Y + G I +AR++FDE D + +WTA
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD----VFTWTA 286
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
M+ GY Q +A ELF +P M M
Sbjct: 287 MVSGYIQNRMVEEARELFDK------MPERNEVSWNAMLAGYVQGERMEMAKE------- 333
Query: 362 LFDNTPVRN-----ALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
LFD P RN +I YA+C +S+A+ +F+ ++D VSW + I+G +QSG ++EA
Sbjct: 334 LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
L +F +M E + + LS CA + AL LG +H +K G +VG ALL
Sbjct: 394 LRLFVQMEREG-GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY-ETGCFVGNALL 451
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
Y KCG + A +F M K+ V+W+ MI+GY G G ++ F M +E +P++
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
+VL+ACSH+G+V +G + F+ M ++ +P+ +HYACMVDLL RAG L++A + +
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 597 MPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMV 656
MP +P +++G L +H EL E A ++ + P+ + YVL+SNLYAS GRWG V
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 631
Query: 657 KQVREMIKQRGLNKVPGCSLVEIDLNDTYS 686
++R ++ +G+ KVPG S +EI N T++
Sbjct: 632 GKLRVRMRDKGVKKVPGYSWIEIQ-NKTHT 660
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 211/452 (46%), Gaps = 22/452 (4%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
+LS YA G + AR +FD +P N S+ A+L Y N+ + + +R
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK-SRENWA--- 218
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFD 184
LV ++ +L + + +V+A + + D N ++ Y++ G + AR++FD
Sbjct: 219 -LVSWNCLLGGFVKKKKIVEARQFFDSM---NVRDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 185 EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQ 244
E ++V +WT+M Y+QN E LF++M E N+ + +++ + +
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEM 330
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
K + + V +V+++ +++ Y +CG I +A+ +FD+M D VSW AMI
Sbjct: 331 AKEL--FDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDP----VSWAAMIA 382
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
GYSQ GH +AL LF G N +G LHG +VK G
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
V NAL+ MY KC + +A +F+ KD+VSWN+ I+G ++ G AL F+ M+
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
E P DA T+V VLSAC+ G + G +D V + +++ + G
Sbjct: 503 REGLKPDDA-TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGL 561
Query: 485 AKSARMVFDGMG-EKNAVTWSAMISGYGMQGD 515
+ A + M E +A W ++ + G+
Sbjct: 562 LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 219/516 (42%), Gaps = 76/516 (14%)
Query: 152 VIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
++K G SD N + +Y + G A +VF + + VS+ M Y++N
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELAR 115
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
+LF+ M E + + + V + + GK + + V S+ ++L+ Y
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVR------NRNLGKARELFEIMPERDVCSW--NTMLSGY 167
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR-NWAGILPN 330
+ G + DAR VFD M +D VSW A++ Y Q +A LF R NWA + N
Sbjct: 168 AQNGCVDDARSVFDRMPEKND----VSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN 223
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL------FDNTPVR-----NALIDMYAKC 379
LL G V K + FD+ VR N +I YA+
Sbjct: 224 --------------------CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 380 HLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGV 439
+ +AR +F+ + +DV +W + +SG Q+ EA E+F +M P+ V
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-------PERNEV--- 313
Query: 440 LSACASLGALPLGSSIH-AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK 498
S A L G + A L D + ++ ++ YA+CG A+ +FD M ++
Sbjct: 314 -SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 499 NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF 558
+ V+W+AMI+GY G ++ LF M +E N F+S L+ C+ + G +L
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH 432
Query: 559 HMMCRELNFVPSMKHYACMVD-----LLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGC 613
+ V C V + + G+++EA D +M + VS + + G
Sbjct: 433 GRL------VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS-WNTMIAGY 485
Query: 614 GLHSEFELGEVAIR-----RMLELHPDQACYYVLVS 644
H GEVA+R + L PD A ++S
Sbjct: 486 SRHG---FGEVALRFFESMKREGLKPDDATMVAVLS 518
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 199/666 (29%), Positives = 333/666 (50%), Gaps = 30/666 (4%)
Query: 37 LSPICKNIDTVKK---FHASLIVHGFPGDTK-------LLSLYASFGFLRHARRLFDHLP 86
L+ C +I +K+ HA ++ G T+ L+S+Y G L AR++FD +P
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH---DLVVFSIVLKACSELRDVV 143
N+ S+ A+ Y N D S+ + F + + F+ +++ C+ L DV+
Sbjct: 160 HRNVVSYNALYSAYSRN---PDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVL 216
Query: 144 QAARLHCHVIKSGPSDGFVLN-GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYV 202
+ L+ +IK G SD V+ ++ YS CG + SAR++FD + R+ V+W +M V +
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 203 QNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF 262
+ND +GL F M VD FT ++ C+KLGS GK +H ++ S +
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 263 LATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD- 321
L +LL+MY CGD+ +A VF + +LVSW ++I G S+ G +A+ ++
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNP----NLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
+ P+ G LLHG V K G + V L+ MY K
Sbjct: 393 LRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNRE 452
Query: 382 VSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLS 441
A+ VF+ ++DVV W I G ++ G++ A++ F M E + D ++ V+
Sbjct: 453 AESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK-NRSDGFSLSSVIG 511
Query: 442 ACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAV 501
AC+ + L G H A++ G C + V AL++ Y K G ++A +F +
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGF-DCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLK 570
Query: 502 TWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
W++M+ Y G +++ F +L+ P+ V + S+LAACSH G +G L++ M
Sbjct: 571 CWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM 630
Query: 562 CRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPG---VSVFGAYLHGCGLHSE 618
+E KHY+CMV+L+++AG + EAL+ I++ P PG ++ L C
Sbjct: 631 -KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP--PGNNQAELWRTLLSACVNTRN 687
Query: 619 FELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
++G A ++L+L P+ ++L+SNLYA +GRW V ++R I+ +K PG S +E
Sbjct: 688 LQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIE 747
Query: 679 IDLNDT 684
++ N+T
Sbjct: 748 VNNNNT 753
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 174/599 (29%), Positives = 285/599 (47%), Gaps = 25/599 (4%)
Query: 61 GDTKLLSLYASFGFLRHARRLFDHLPSPN---LHSFKAMLRWYFL-NNLHSDVVSFYHLT 116
+ L+S+Y L AR++FD +P N L A+ + + ++LHS ++ L
Sbjct: 24 ANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQII---KLG 80
Query: 117 RYTLGFFHDL--VVFSIV--LKACSELRDVVQAARLHCHVIKSGPSDG----FVLNGLVD 168
+ + FF L + S+V + C + + +A ++H V+ +G + N L+
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLIS 140
Query: 169 AYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQN-DCAVEGLRLFNRMREGFVDGNDF 227
Y +CG + ARKVFD++ RNVVS+ +++ AY +N D A L M +V N
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 228 TVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
T SLV C L + G ++ ++K G N + TS+L MY CGD+ AR++FD +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 288 LTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXX 347
+ D V+W MIVG + L F + +G+ P
Sbjct: 261 ----NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 348 XMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGC 407
+G L+H ++ + P+ NAL+DMY C + +A YVF ++VSWNS ISGC
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 408 AQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSC 467
+++G +A+ M++R+ S PD T +SA A G +H K G
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYER- 435
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML 527
S++VGT LL+ Y K +A+SA+ VFD M E++ V W+ MI G+ G+ ++ F +M
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMY 495
Query: 528 KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
+E+ + +SV+ ACS M+ +G +FH + F M +VD+ + G
Sbjct: 496 REKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY 554
Query: 588 KEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVS 644
+ A + I + P + + + L H E ++LE PD Y L++
Sbjct: 555 ETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/694 (28%), Positives = 324/694 (46%), Gaps = 117/694 (16%)
Query: 48 KKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHS 107
K F +S+++ LL +Y+ G + AR LFD +P N S+ M+ Y +
Sbjct: 55 KGFLSSIVIVA----NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKG 110
Query: 108 DVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLV 167
+ F+ + DG+ N +V
Sbjct: 111 TSLRFFDMM---------------------------------------PERDGYSWNVVV 131
Query: 168 DAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDF 227
++K G + AR++F+ + E++VV+ S+ Y+ N A E LRLF + +
Sbjct: 132 SGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAI 188
Query: 228 TVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
T+ +++ AC +L +L GK +H ++ G+ +S + +SL+N+Y KCGD+ A + +++
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 288 LTSDDE---------------------LD------LVSWTAMIVGYSQRGHPLKALELFT 320
DD D ++ W +MI GY ++AL LF
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 321 DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC-----GLFDNTPVRNALIDM 375
+ + N +G L G + C GL D+ V + L+DM
Sbjct: 309 E------MRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDM 362
Query: 376 YAKCH-------------------------------LVSDARYVFETTVQKDVVSWNSFI 404
Y+KC + DA+ VFE K ++SWNS
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 405 SGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL 464
+G +Q+G E LE F +M P D V++ V+SACAS+ +L LG + A A GL
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDL-PTDEVSLSSVISACASISSLELGEQVFARATIVGL 481
Query: 465 VSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFR 524
S + V ++L++ Y KCG + R VFD M + + V W++MISGY G G +I LF+
Sbjct: 482 DSDQV-VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 525 DMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARA 584
M P ++ F VL AC++ G+V EG +LF M + FVP +H++CMVDLLARA
Sbjct: 541 KMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 585 GNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVS 644
G ++EA++ +++MP S++ + L GC + +G+ A +++EL P+ + YV +S
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLS 660
Query: 645 NLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
++A+ G W VR+++++ + K PG S +
Sbjct: 661 AIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
V +L +C+S L + LK G +S + V LL Y++ G AR +FD M
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 497 EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSR 556
++N +W+ MI GY G+ S+ F DM+ E + + V++ + +G + R
Sbjct: 90 DRNYFSWNTMIEGYMNSGEKGTSLRFF-DMMPER---DGYSWNVVVSGFAKAGELSVARR 145
Query: 557 LFHMM 561
LF+ M
Sbjct: 146 LFNAM 150
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 286/524 (54%), Gaps = 11/524 (2%)
Query: 166 LVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGN 225
L+ +Y + G V AR +FDE+ +R+VV+WT+M Y ++ F+ M + N
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 226 DFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR-KVF 284
+FT+ S++ +C + L G VHG VVK G+ + ++ +++NMY C +A +F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXX 344
++ +D V+WT +I G++ G + L+++
Sbjct: 171 RDIKVKND----VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 345 XXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFI 404
G +H V+K G N PV N+++D+Y +C +S+A++ F KD+++WN+ I
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 405 SGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL 464
S +S S+ EAL MFQR S+ F P + T +++ACA++ AL G +H + G
Sbjct: 287 SELERSDSS-EALLMFQRFESQGFVP-NCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 465 VSCSIYVGTALLNFYAKCGDAKSARMVF-DGMGEKNAVTWSAMISGYGMQGDGVGSIALF 523
+ ++ + AL++ YAKCG+ ++ VF + + +N V+W++M+ GYG G G ++ LF
Sbjct: 345 -NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 524 RDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLAR 583
M+ P+ +VF +VL+AC H+G+V +G + F++M E P Y C+VDLL R
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 584 AGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFEL-GEVAIRRMLELHPDQACYYVL 642
AG + EA + +++MP +P S +GA L C H L +A R+++EL P YV+
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 643 VSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYS 686
+S +YA++G+W +VR+M++ G K G S + ++ N +S
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVE-NQVFS 566
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 188/393 (47%), Gaps = 10/393 (2%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T L+ Y G + AR LFD +P ++ ++ AM+ Y +N ++ +H G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH-EMVKQGT 107
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSAR- 180
+ S VLK+C ++ + A +H V+K G +V N +++ Y+ C A
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
+F +I +N V+WT++ + + GL+++ +M + + + V A +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
S+ GK +H V+K G N + S+L++Y +CG + +A+ F EM ++ DL++W
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM----EDKDLITWN 283
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
+I +R +AL +F G +PN G LHG + +
Sbjct: 284 TLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
G N + NALIDMYAKC + D++ VF E ++++VSW S + G G EA+E+
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
F +M S PD + + VLSAC G + G
Sbjct: 403 FDKMVSSGIR-PDRIVFMAVLSACRHAGLVEKG 434
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 206/444 (46%), Gaps = 53/444 (11%)
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
LAT+L+ Y + G + +AR +FDEM + D+V+WTAMI GY+ + +A E F +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEM----PDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
G PN G L+HG+VVK G+ + V NA+++MYA C +
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 382 VSDAR-YVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS-PPDAVTVVGV 439
+A +F K+ V+W + I+G G L+M+++M E+ P +T+
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--A 219
Query: 440 LSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN 499
+ A AS+ ++ G IHA +K G S ++ V ++L+ Y +CG A+ F M +K+
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQS-NLPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 500 AVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFH 559
+TW+ +IS + D ++ +F+ + PN FTS++AAC++ + G +L
Sbjct: 279 LITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 560 MMCRELNFVPSMKHYACMVDLLARAGNL-------------------------------- 587
+ R F +++ ++D+ A+ GN+
Sbjct: 338 RIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 588 KEALDFIDKM---PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE---LHPDQACYYV 641
EA++ DKM ++P VF A L C E G M ++PD+ Y
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNC 456
Query: 642 LVSNLYASDGRWGMVKQVREMIKQ 665
+V L GR G + + E++++
Sbjct: 457 VVDLL----GRAGKIGEAYELVER 476
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 153/283 (54%), Gaps = 9/283 (3%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIA 187
+I ++A + + V ++H VIK G S+ V+N ++D Y +CG++ A+ F E+
Sbjct: 216 ITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME 275
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR-EGFVDGNDFTVGSLVTACTKLGSLHQGK 246
++++++W ++ ++D + E L +F R +GFV N +T SLV AC + +L+ G+
Sbjct: 276 DKDLITWNTLISELERSDSS-EALLMFQRFESQGFVP-NCYTFTSLVAACANIAALNCGQ 333
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+HG + + G + N LA +L++MY KCG+I D+++VF E++ D +LVSWT+M++GY
Sbjct: 334 QLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV---DRRNLVSWTSMMIGY 390
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM-LLHGLVVKCGLFDN 365
G+ +A+ELF +GI P+ G+ + + + G+ +
Sbjct: 391 GSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPD 450
Query: 366 TPVRNALIDMYAKCHLVSDARYVFETT-VQKDVVSWNSFISGC 407
+ N ++D+ + + +A + E + D +W + + C
Sbjct: 451 RDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 136/268 (50%), Gaps = 12/268 (4%)
Query: 43 NIDTVKKFHASLIVHGF----PGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLR 98
++ T K+ HAS+I GF P +L LY G+L A+ F + +L ++ ++
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 99 WYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS 158
++ ++ F + GF + F+ ++ AC+ + + +LH + + G +
Sbjct: 288 ELERSDSSEALLMFQRFE--SQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 159 DGFVL-NGLVDAYSKCGHVCSARKVFDEIAE-RNVVSWTSMFVAYVQNDCAVEGLRLFNR 216
L N L+D Y+KCG++ +++VF EI + RN+VSWTSM + Y + E + LF++
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 217 MREGFVDGNDFTVGSLVTACTKLGSLHQG-KWVHGYVVKSGIHVNSFLATSLLNMYVKCG 275
M + + ++++AC G + +G K+ + + GI+ + + ++++ + G
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 276 DIGDARKVFDEMLTSDDELDLVSWTAMI 303
IG+A ++ + M DE +W A++
Sbjct: 466 KIGEAYELVERMPFKPDE---STWGAIL 490
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/559 (32%), Positives = 286/559 (51%), Gaps = 11/559 (1%)
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNG--LVDAYSKCGHVCSARK 181
H++ L+ C++ +D V ++H +++ G D G LV+ Y+KCG + A
Sbjct: 58 HNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVL 117
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
VF +ER+V + ++ +V N ++ + + MR + + +T SL+ +
Sbjct: 118 VFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-E 175
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
L K VHG K G + ++ + L+ Y K + DA+KVFDE+ DD V W A
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDS---VLWNA 232
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
++ GYSQ AL +F+ G+ + G +HGL VK G
Sbjct: 233 LVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTG 292
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
+ V NALIDMY K + +A +FE ++D+ +WNS + G L +F+
Sbjct: 293 SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFE 352
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLV---SCSIYVGTALLNF 478
RM P D VT+ VL C L +L G IH + + GL+ S + ++ +L++
Sbjct: 353 RMLCSGIRP-DIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDM 411
Query: 479 YAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVF 538
Y KCGD + ARMVFD M K++ +W+ MI+GYG+Q G ++ +F M + +P+E+ F
Sbjct: 412 YVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITF 471
Query: 539 TSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP 598
+L ACSHSG + EG M N +P+ HYAC++D+L RA L+EA + P
Sbjct: 472 VGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKP 531
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQ 658
+ V+ + L C LH +L VA +R+ EL P+ YVL+SN+Y G++ V
Sbjct: 532 ICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLD 591
Query: 659 VREMIKQRGLNKVPGCSLV 677
VR+ ++Q+ + K PGCS +
Sbjct: 592 VRDAMRQQNVKKTPGCSWI 610
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 39/414 (9%)
Query: 33 PTLYLSPICKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSP 88
P+L + VKK H GF D + L++ Y+ F + A+++FD LP
Sbjct: 165 PSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDR 224
Query: 89 NLHSFKAMLRWYFLNNLHSDV-------VSFYHLTRYTLGFFHDLVVFSIVLKACSELRD 141
+ + W L N +S + + F + +G + + VL A + D
Sbjct: 225 D-----DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTI--TSVLSAFTVSGD 277
Query: 142 VVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVA 200
+ +H +K+G SD V N L+D Y K + A +F+ + ER++ +W S+
Sbjct: 278 IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC- 336
Query: 201 YVQNDCAVEG--LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGI- 257
V + C L LF RM + + T+ +++ C +L SL QG+ +HGY++ SG+
Sbjct: 337 -VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLL 395
Query: 258 ---HVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
N F+ SL++MYVKCGD+ DAR VFD M D SW MI GY +
Sbjct: 396 NRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDS----ASWNIMINGYGVQSCGEL 451
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM-LLHGLVVKCGLFDNTPVRNALI 373
AL++F+ AG+ P+ G L + + + +I
Sbjct: 452 ALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVI 511
Query: 374 DMYAKCHLVSDARYVFETTVQKDV----VSWNSFISGCAQSGSAYEALEMFQRM 423
DM + + +A +E + K + V W S +S C G+ AL +R+
Sbjct: 512 DMLGRADKLEEA---YELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRL 562
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 206/669 (30%), Positives = 341/669 (50%), Gaps = 32/669 (4%)
Query: 26 AFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHL 85
A +L P L I + T++K + L+ F G + L+S +A G L +AR++F+ +
Sbjct: 216 ACSLTEPDVRLLEQI---MCTIQK--SGLLTDLFVG-SGLVSAFAKSGSLSYARKVFNQM 269
Query: 86 PSPNLHSFKAML------RW-YFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSE 138
+ N + ++ +W L D+ S ++ + + +++ S + +E
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES----YVILLSSFPEYSLAE 325
Query: 139 LRDVVQAARLHCHVIKSGPSDGFVL--NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTS 196
+ + +H HVI +G D V NGLV+ Y+KCG + AR+VF + +++ VSW S
Sbjct: 326 EVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNS 385
Query: 197 MFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSG 256
M QN C +E + + MR + FT+ S +++C L G+ +HG +K G
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 257 IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI--VGYSQRGHPLK 314
I +N ++ +L+ +Y + G + + RK+F M E D VSW ++I + S+R P +
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSM----PEHDQVSWNSIIGALARSERSLP-E 500
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALID 374
A+ F + AG N +G +HGL +K + D NALI
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIA 560
Query: 375 MYAKCHLVSDARYVFETTVQ-KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDA 433
Y KC + +F + +D V+WNS ISG + +AL++ M ++ D+
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML-QTGQRLDS 619
Query: 434 VTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD 493
VLSA AS+ L G +HA +++ L S + VG+AL++ Y+KCG A F+
Sbjct: 620 FMYATVLSAFASVATLERGMEVHACSVRACLES-DVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 494 GMGEKNAVTWSAMISGYGMQGDGVGSIALFRDM-LKEECEPNEVVFTSVLAACSHSGMVG 552
M +N+ +W++MISGY G G ++ LF M L + P+ V F VL+ACSH+G++
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 553 EGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHG 612
EG + F M P ++H++CM D+L RAG L + DFI+KMP++P V ++ L
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 613 C--GLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNK 670
C + ELG+ A + +L P+ A YVL+ N+YA+ GRW + + R+ +K + K
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 671 VPGCSLVEI 679
G S V +
Sbjct: 859 EAGYSWVTM 867
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 224/473 (47%), Gaps = 22/473 (4%)
Query: 50 FHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNL 105
FH+ L + D L++ Y G AR++FD +P N S+ ++ Y N
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 106 HSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDV--VQAARLHCHVIK-SGPSDGFV 162
H + + F G F + F VL+AC E+ V + ++H + K S D V
Sbjct: 83 HKEALVFLR-DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 163 LNGLVDAYSKC-GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
N L+ Y KC G V A F +I +N VSW S+ Y Q R+F+ M+
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 222 VDGNDFTVGSLVTACTKLGS--LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD 279
++T GSLVT L + + + + KSG+ + F+ + L++ + K G +
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRN-WAGILPNXXXXXXXX 338
ARKVF++M T + V+ ++VG ++ +A +LF D N + P
Sbjct: 262 ARKVFNQMETR----NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 339 ---XXXXXXXXXXMGMLLHGLVVKCGLFD-NTPVRNALIDMYAKCHLVSDARYVFETTVQ 394
G +HG V+ GL D + N L++MYAKC ++DAR VF
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 395 KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
KD VSWNS I+G Q+G EA+E ++ MR P + T++ LS+CASL LG
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI-LPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMI 507
IH +LK G + ++ V AL+ YA+ G R +F M E + V+W+++I
Sbjct: 437 IHGESLKLG-IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 250/525 (47%), Gaps = 36/525 (6%)
Query: 116 TRYTLGFFHDLVVFSIVLKACSELR-DVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKC 173
T YT G S+V ACS DV ++ C + KSG +D FV +GLV A++K
Sbjct: 205 TEYTFG--------SLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 174 GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
G + ARKVF+++ RN V+ + V V+ E +LF M +D + + L+
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILL 315
Query: 234 TACTKLG-----SLHQGKWVHGYVVKSG-IHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
++ + L +G+ VHG+V+ +G + + L+NMY KCG I DAR+VF M
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 288 LTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXX 347
D VSW +MI G Q G ++A+E + ILP
Sbjct: 376 TDKDS----VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 348 XMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGC 407
+G +HG +K G+ N V NAL+ +YA+ +++ R +F + + D VSWNS I
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 408 AQSGSAY-EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
A+S + EA+ F + + + +T VLSA +SL LG IH ALK+ +
Sbjct: 492 ARSERSLPEAVVCFLNAQ-RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIAD 550
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGE-KNAVTWSAMISGYGMQGDGVGSIALFRD 525
AL+ Y KCG+ +F M E ++ VTW++MISGY ++ L
Sbjct: 551 -EATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWF 609
Query: 526 MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFH---MMCRELNFVPSMKHYACMVDLLA 582
ML+ + ++ +VL+A + + G + C E + V + +VD+ +
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG----SALVDMYS 665
Query: 583 RAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIR 627
+ G L AL F + MPV+ S + + + G H + GE A++
Sbjct: 666 KCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQ---GEEALK 706
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 206/454 (45%), Gaps = 13/454 (2%)
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
D ++ N L++AY + G SARKVFDE+ RN VSW + Y +N E L M
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQ--GKWVHGYVVKSGIHVNSFLATSLLNMYVKC-G 275
+ + N + S++ AC ++GS+ G+ +HG + K V++ ++ L++MY KC G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 276 DIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXX 335
+G A F ++ + VSW ++I YSQ G A +F+ + G P
Sbjct: 155 SVGYALCAFGDIEVKNS----VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFG 210
Query: 336 XXXXXXXXXXXXXMGMLLHGL--VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV 393
+ +L + + K GL + V + L+ +AK +S AR VF
Sbjct: 211 SLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 394 QKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE-SFSPPDAVTVVGVLS--ACASLGALP 450
++ V+ N + G + EA ++F M S SP V ++ + A L
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLK 330
Query: 451 LGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGY 510
G +H + GLV + +G L+N YAKCG AR VF M +K++V+W++MI+G
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 511 GMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPS 570
G + ++ ++ M + + P S L++C+ G ++ H +L +
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI-HGESLKLGIDLN 449
Query: 571 MKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
+ ++ L A G L E MP VS
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS 483
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 140/300 (46%), Gaps = 11/300 (3%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
S V +C +G ++ H + K+ + + +L +L+N Y++ GD ARKVFDEM
Sbjct: 8 SFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 291 DDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM- 349
+ VSW ++ GYS+ G +AL D GI N +
Sbjct: 66 ----NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL 121
Query: 350 -GMLLHGLVVKCGLFDNTPVRNALIDMYAKC-HLVSDARYVFETTVQKDVVSWNSFISGC 407
G +HGL+ K + V N LI MY KC V A F K+ VSWNS IS
Sbjct: 122 FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 408 AQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA-SLGALPLGSSIHAFALKDGLVS 466
+Q+G A +F M+ + P + V +AC+ + + L I K GL++
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDM 526
++VG+ L++ +AK G AR VF+ M +NAVT + ++ G Q G + LF DM
Sbjct: 242 -DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 302/612 (49%), Gaps = 64/612 (10%)
Query: 129 FSIVLKACSELRDVVQA---ARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFD 184
+S+ +K C L Q+ +H ++I++ P + F+ N +V AY+ AR+VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 185 EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM--REG-----FVDGNDFT--VGSLVTA 235
I + N+ SW ++ +AY + E F ++ R+G ++G + VG+ V A
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 236 CTKL-----------------------GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYV 272
+ G + GK +HG V+K G + + LL MY
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 273 KCGDIGDARKVF---DE-----------------------MLTSDDELDLVSWTAMIVGY 306
G I DA+KVF D+ L E D VSW AMI G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
+Q G +A+E F + G+ + G +H +++ D+
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
V +ALIDMY KC + A+ VF+ QK+VVSW + + G Q+G A EA+++F M+
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
PD T+ +SACA++ +L GS H A+ GL+ + V +L+ Y KCGD
Sbjct: 366 GID-PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH-YVTVSNSLVTLYGKCGDID 423
Query: 487 SARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
+ +F+ M ++AV+W+AM+S Y G V +I LF M++ +P+ V T V++ACS
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
+G+V +G R F +M E VPS+ HY+CM+DL +R+G L+EA+ FI+ MP P +
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQR 666
L C E+G+ A ++EL P Y L+S++YAS G+W V Q+R ++++
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 667 GLNKVPGCSLVE 678
+ K PG S ++
Sbjct: 604 NVKKEPGQSWIK 615
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 215/475 (45%), Gaps = 43/475 (9%)
Query: 26 AFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHL 85
++ L P LY+ I KK L L+ + G + A +LF +
Sbjct: 172 SYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM 231
Query: 86 PSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQA 145
++ S+ AM++ N L + + + + G D F VL AC L + +
Sbjct: 232 EKDSV-SWAAMIKGLAQNGLAKEAIECFREMK-VQGLKMDQYPFGSVLPACGGLGAINEG 289
Query: 146 ARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQN 204
++H +I++ D +V + L+D Y KC + A+ VFD + ++NVVSWT+M V Y Q
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 205 DCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA 264
A E +++F M+ +D + +T+G ++AC + SL +G HG + SG+ ++
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
SL+ +Y KCGDI D+ ++F+EM + D VSWTAM+ Y+Q G ++ ++LF
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEM----NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
G+ P+ G+ L G++ C R L++ + +
Sbjct: 466 HGLKPD-------------------GVTLTGVISACS-------RAGLVEKGQRYFKLMT 499
Query: 385 ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
+ Y + + ++ I ++SG EA+ M PPDA+ +LSAC
Sbjct: 500 SEY----GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP----FPPDAIGWTTLLSACR 551
Query: 445 SLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN 499
+ G L +G ++ + Y T L + YA G S + GM EKN
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGY--TLLSSIYASKGKWDSVAQLRRGMREKN 604
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 330/625 (52%), Gaps = 20/625 (3%)
Query: 59 FPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRY 118
F G++ + Y G L R FD + S + S+ ++ + + ++ R
Sbjct: 62 FQGNS-IADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLR- 119
Query: 119 TLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVC 177
GF + +V+ AC L ++H +VI+SG V N ++ Y+ +
Sbjct: 120 VWGFEPNTSTLVLVIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL- 176
Query: 178 SARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTAC 236
SARK+FDE++ER+V+SW+ + +YVQ+ V GL+LF M E + + TV S++ AC
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 237 TKLGSLHQGKWVHGYVVKSGIHV-NSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
T + + G+ VHG+ ++ G + + F+ SL++MY K D+ A +VFDE +
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN---- 292
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHG 355
+VSW +++ G+ +ALE+F + + +HG
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
++++ G N ++LID Y C LV DA V ++ KDVVS ++ ISG A +G + E
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTAL 475
A+ +F MR P+A+TV+ +L+AC+ L H A++ L I VGT++
Sbjct: 413 AISIFCHMRD----TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSI 468
Query: 476 LNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNE 535
++ YAKCG + AR FD + EKN ++W+ +IS Y + G ++ALF +M ++ PN
Sbjct: 469 VDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNA 528
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID 595
V + + L+AC+H G+V +G +F M E + PS++HY+C+VD+L+RAG + A++ I
Sbjct: 529 VTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIK 587
Query: 596 KMP--VQPGVSVFGAYLHGC-GLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGR 652
+P V+ G S +GA L GC + + + +LEL P + Y+L S+ +A++
Sbjct: 588 NLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKS 647
Query: 653 WGMVKQVREMIKQRGLNKVPGCSLV 677
W V +R ++K+R + V G S+V
Sbjct: 648 WEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 243/532 (45%), Gaps = 38/532 (7%)
Query: 84 HLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVV 143
HL S L + + ++ ++ +VVS Y + F+D VF IV KAC++L +
Sbjct: 4 HLCS-KLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLF 62
Query: 144 QAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQ 203
Q N + D Y KCG +CS + FD + R+ VSW + +
Sbjct: 63 QG------------------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLD 104
Query: 204 NDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFL 263
EGL F+++R + N T+ ++ AC L G+ +HGYV++SG S +
Sbjct: 105 YGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSV 162
Query: 264 ATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR- 322
S+L MY D ARK+FDEM E D++SW+ +I Y Q P+ L+LF +
Sbjct: 163 QNSILCMYAD-SDSLSARKLFDEM----SERDVISWSVVIRSYVQSKEPVVGLKLFKEMV 217
Query: 323 NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD--NTPVRNALIDMYAKCH 380
+ A P+ +G +HG ++ G FD + V N+LIDMY+K
Sbjct: 218 HEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRG-FDLADVFVCNSLIDMYSKGF 276
Query: 381 LVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
V A VF+ T +++VSWNS ++G + EALEMF M E+ D VTVV +L
Sbjct: 277 DVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAV-EVDEVTVVSLL 335
Query: 441 SACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNA 500
C SIH ++ G S + + ++L++ Y C A V D M K+
Sbjct: 336 RVCKFFEQPLPCKSIHGVIIRRGYESNEVAL-SSLIDAYTSCSLVDDAGTVLDSMTYKDV 394
Query: 501 VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
V+ S MISG G +I++F M PN + S+L ACS S + +
Sbjct: 395 VSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGI 451
Query: 561 MCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS---VFGAY 609
R + + +VD A+ G ++ A D++ + +S + AY
Sbjct: 452 AIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAY 503
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 219/473 (46%), Gaps = 22/473 (4%)
Query: 48 KKFHASLIVHGFPG----DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
+K H +I GF G +L +YA L AR+LFD + ++ S+ ++R Y +
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG--PSDGF 161
+ + + D V + VLKAC+ + D+ +H I+ G +D F
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
V N L+D YSK V SA +VFDE RN+VSW S+ +V N E L +F+ M +
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR 281
V+ ++ TV SL+ C K +HG +++ G N +SL++ Y C + DA
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXX 341
V D M D+VS + MI G + G +A+ +F PN
Sbjct: 384 TVLDSMTYK----DVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNAC 436
Query: 342 XXXXXXXMGMLLHGLVVKCGL-FDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSW 400
HG+ ++ L ++ V +++D YAKC + AR F+ +K+++SW
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISW 496
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI-HAFA 459
IS A +G +AL +F M+ + ++ P+AVT + LSAC G + G I +
Sbjct: 497 TVIISAYAINGLPDKALALFDEMKQKGYT-PNAVTYLAALSACNHGGLVKKGLMIFKSMV 555
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK---NAVTWSAMISG 509
+D S Y + +++ ++ G+ +A + + E A W A++SG
Sbjct: 556 EEDHKPSLQHY--SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 11/272 (4%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K H +I G+ + + L+ Y S + A + D + ++ S M+
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKS--GPSDGF 161
+ +S + R T + + V S+ L ACS D+ + H I+ +D
Sbjct: 408 GRSDEAISIFCHMRDTP---NAITVISL-LNACSVSADLRTSKWAHGIAIRRSLAINDIS 463
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
V +VDAY+KCG + AR+ FD+I E+N++SWT + AY N + L LF+ M++
Sbjct: 464 VGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKG 523
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR 281
N T + ++AC G + +G + +V+ + + +++M + G+I A
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAV 583
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPL 313
++ L D + +W A++ G R L
Sbjct: 584 ELIKN-LPEDVKAGASAWGAILSGCRNRFKKL 614
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 307/629 (48%), Gaps = 96/629 (15%)
Query: 145 AARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDE------------------ 185
A +HC VIKSG +++N L++ YSK G+ ARK+FDE
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 186 -------------IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSL 232
+ +R+ VSWT+M V Y + +R+ M + ++ FT+ ++
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 233 VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD- 291
+ + + GK VH ++VK G+ N ++ SLLNMY KCGD A+ VFD M+ D
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 292 --------------------------DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWA 325
E D+V+W +MI G++QRG+ L+AL++F+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 326 GIL-PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
+L P+ +G +H +V G + V NALI MY++C V
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 385 ARYVFE---------------------------------TTVQKDVVSWNSFISGCAQSG 411
AR + E + +DVV+W + I G Q G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYV 471
S EA+ +F+ M P++ T+ +LS +SL +L G IH A+K G + S+ V
Sbjct: 393 SYGEAINLFRSMVGGG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY-SVSV 450
Query: 472 GTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE 530
AL+ YAK G+ SA FD + E++ V+W++MI G ++ LF ML E
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 531 CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA 590
P+ + + V +AC+H+G+V +G + F MM +P++ HYACMVDL RAG L+EA
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 570
Query: 591 LDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASD 650
+FI+KMP++P V +G+ L C +H +LG+VA R+L L P+ + Y ++NLY++
Sbjct: 571 QEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 630
Query: 651 GRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
G+W ++R+ +K + K G S +E+
Sbjct: 631 GKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 230/531 (43%), Gaps = 69/531 (12%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYF-LNNLHSDVVSFYHLTRYTLGFF 123
+LS Y+ G + FD LP + S+ M+ Y + H + + + G
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE--GIE 143
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARKV 182
+ VL + + R + ++H ++K G V N L++ Y+KCG A+ V
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 183 FD-------------------------------EIAERNVVSWTSMFVAYVQNDCAVEGL 211
FD ++AER++V+W SM + Q + L
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 212 RLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
+F++M R+ + + FT+ S+++AC L L GK +H ++V +G ++ + +L++M
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 271 YVKCGDIGDARKVFDEMLTSD-----------------------------DELDLVSWTA 301
Y +CG + AR++ ++ T D + D+V+WTA
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
MIVGY Q G +A+ LF G PN G +HG VK G
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFE-TTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
+ V NALI MYAK ++ A F+ ++D VSW S I AQ G A EALE+F
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+ M E PD +T VGV SAC G + G + ++ +++ +
Sbjct: 504 ETMLMEGLR-PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 481 KCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGD-GVGSIALFRDMLKE 529
+ G + A+ + M E + VTW +++S + + +G +A R +L E
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLE 613
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 191/436 (43%), Gaps = 76/436 (17%)
Query: 44 IDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRW 99
++T KK H+ ++ G G+ LL++YA G A+ +FD + ++ S+ AM+
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 100 Y------------FLNNLHSDVVS--------------------FYHLTRYTLGFFHDLV 127
+ F D+V+ F + R +L D
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL-LSPDRF 280
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARK----- 181
+ VL AC+ L + ++H H++ +G G VLN L+ YS+CG V +AR+
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 182 ----------------------------VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRL 213
+F + +R+VV+WT+M V Y Q+ E + L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
F M G N +T+ ++++ + L SL GK +HG VKSG + ++ +L+ MY K
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
G+I A + FD + E D VSWT+MI+ +Q GH +ALELF G+ P+
Sbjct: 461 AGNITSASRAFDLIRC---ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA-LIDMYAKCHLVSDAR-YVFET 391
G ++ T A ++D++ + L+ +A+ ++ +
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 392 TVQKDVVSWNSFISGC 407
++ DVV+W S +S C
Sbjct: 578 PIEPDVVTWGSLLSAC 593
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 294/553 (53%), Gaps = 16/553 (2%)
Query: 133 LKACSELRDVVQAARLHCHVIKSGPSDGFVLNG-LVDAYSKCGHVCSARKVFDEIAERNV 191
LK CS Q +H + I +G L L+D Y K G V ARK+FD I++R+V
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 192 VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGY 251
VSWT+M + + + L LF M V N FT GS++ +C LG L +G +HG
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS 138
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
V K N + ++LL++Y +CG + +AR FD M E DLVSW AMI GY+
Sbjct: 139 VEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSM----KERDLVSWNAMIDGYTANAC 194
Query: 312 PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA 371
+ LF G P+ + LHGL +K G ++ + +
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRS 254
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS-AYEALEMFQ---RMRSES 427
L++ Y KC +++A + E T ++D++S + I+G +Q + +A ++F+ RM+++
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTK- 313
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKS 487
D V V +L C ++ ++ +G IH FALK + + +G +L++ YAK G+ +
Sbjct: 314 ---MDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIED 370
Query: 488 ARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSH 547
A + F+ M EK+ +W+++I+GYG G+ +I L+ M E +PN+V F S+L+ACSH
Sbjct: 371 AVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSH 430
Query: 548 SGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP--VQPGVSV 605
+G G +++ M + +H +C++D+LAR+G L+EA I V S
Sbjct: 431 TGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSST 490
Query: 606 FGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQ 665
+GA+L C H +L +VA ++L + P + Y+ ++++YA++G W R+++K+
Sbjct: 491 WGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKE 550
Query: 666 RG-LNKVPGCSLV 677
G NK PG SLV
Sbjct: 551 SGSCNKAPGYSLV 563
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 253/538 (47%), Gaps = 39/538 (7%)
Query: 32 PPTLYLS--PICKNIDTVKKF---HASLIVHGFPGDTKL----LSLYASFGFLRHARRLF 82
P+LYL +C + K+ H + I +GF + +L + LY G ++HAR+LF
Sbjct: 11 SPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLF 70
Query: 83 DHLPSPNLHSFKAMLRWYFLNNLHSD-VVSFYHLTRYTLGFFHDLVVFSIVLKACSELRD 141
D + ++ S+ AM+ + H D ++ F + R + + + VLK+C +L
Sbjct: 71 DRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK--ANQFTYGSVLKSCKDLGC 128
Query: 142 VVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVA 200
+ + ++H V K + ++ + L+ Y++CG + AR FD + ER++VSW +M
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 201 YVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVN 260
Y N CA LF M + FT GSL+ A + L +HG +K G +
Sbjct: 189 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 261 SFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH-PLKALELF 319
S L SL+N YVKCG + +A K+ + + DL+S TA+I G+SQ+ + A ++F
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHE----GTKKRDLLSCTALITGFSQQNNCTSDAFDIF 304
Query: 320 TDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD-NTPVRNALIDMYAK 378
D + +G +HG +K + + N+LIDMYAK
Sbjct: 305 KDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAK 364
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
+ DA FE +KDV SW S I+G + G+ +A++++ RM E P D VT +
Sbjct: 365 SGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND-VTFLS 423
Query: 439 VLSACASLGALPLGSSI-------HAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
+LSAC+ G LG I H ++ +SC +++ A+ G + A +
Sbjct: 424 LLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSC-------IIDMLARSGYLEEAYAL 476
Query: 492 F---DGMGEKNAVTWSAMISGYGMQGD-GVGSIALFRDMLKEECEP-NEVVFTSVLAA 544
+G+ ++ TW A + G+ + +A + + E +P N + SV AA
Sbjct: 477 IRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAA 534
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/439 (38%), Positives = 249/439 (56%), Gaps = 8/439 (1%)
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
Q K +H V+++G + L T LL V GD+ AR+VFDEM + + W +
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM----HKPRIFLWNTLF 81
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
GY + P ++L L+ G+ P+ G LH VVK G
Sbjct: 82 KGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG 141
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
V L+ MY K +S A ++FE+ KD+V+WN+F++ C Q+G++ ALE F +M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
+++ D+ TVV +LSAC LG+L +G I+ A K+ + C+I V A L+ + KCG
Sbjct: 202 CADAVQF-DSFTVVSMLSACGQLGSLEIGEEIYDRARKEE-IDCNIIVENARLDMHLKCG 259
Query: 484 DAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLA 543
+ ++AR++F+ M ++N V+WS MI GY M GD ++ LF M E PN V F VL+
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 544 ACSHSGMVGEGSRLFHMMCR--ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQP 601
ACSH+G+V EG R F +M + + N P +HYACMVDLL R+G L+EA +FI KMPV+P
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 379
Query: 602 GVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVRE 661
++GA L C +H + LG+ ++E PD Y+VL+SN+YA+ G+W V +VR
Sbjct: 380 DTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRS 439
Query: 662 MIKQRGLNKVPGCSLVEID 680
+++ G KV S VE +
Sbjct: 440 KMRKLGTKKVAAYSSVEFE 458
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 6/311 (1%)
Query: 144 QAARLHCHVIKSGPSD-GFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYV 202
Q ++H V+++G S+ +L L++ G +C AR+VFDE+ + + W ++F YV
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 203 QNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF 262
+N E L L+ +MR+ V ++FT +V A ++LG G +H +VVK G
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 263 LATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR 322
+AT L+ MY+K G++ A +F+ M DLV+W A + Q G+ ALE F
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVK----DLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 323 NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLV 382
+ + +G ++ K + N V NA +DM+ KC
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 383 SDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSA 442
AR +FE Q++VVSW++ I G A +G + EAL +F M++E P+ VT +GVLSA
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR-PNYVTFLGVLSA 320
Query: 443 CASLGALPLGS 453
C+ G + G
Sbjct: 321 CSHAGLVNEGK 331
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 176/371 (47%), Gaps = 14/371 (3%)
Query: 47 VKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFL 102
+KK HA ++ GF T+LL G + +AR++FD + P + + + + Y
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGF 161
N L + + Y R LG D + V+KA S+L D LH HV+K G G
Sbjct: 87 NQLPFESLLLYKKMR-DLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
V LV Y K G + SA +F+ + +++V+W + VQ + L FN+M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR 281
V + FTV S+++AC +LGSL G+ ++ K I N + + L+M++KCG+ AR
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXX 341
+F+EM + ++VSW+ MIVGY+ G +AL LFT G+ PN
Sbjct: 266 VLFEEM----KQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 342 XXXXXXXMGMLLHGLVVKCGLFDNTPVRN---ALIDMYAKCHLVSDA-RYVFETTVQKDV 397
G L+V+ + P + ++D+ + L+ +A ++ + V+ D
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 398 VSWNSFISGCA 408
W + + CA
Sbjct: 382 GIWGALLGACA 392
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 203/676 (30%), Positives = 335/676 (49%), Gaps = 28/676 (4%)
Query: 11 SSKSLIQFRSLSSYIAFTLPHPPTLYLSPICKNI---DTVKKFHASLIVHGF--PGDTKL 65
SS +L+ F + S + H L P + D + H +I GF + L
Sbjct: 182 SSAALLLFHDMRS-CCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGL 240
Query: 66 LSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHD 125
+ +Y + L A +F+ + + S+ M+ Y N +V+ + L R +
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR-NYDVRMN 299
Query: 126 LVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFD 184
V + L+A + + D+V+ +H + ++ G D V L+ YSKCG + A ++F
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 185 EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQ 244
I +R+VVSW++M +Y Q E + LF M + N T+ S++ C + +
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL 419
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
GK +H Y +K+ I AT++++MY KCG A K F+ + D V++ A+
Sbjct: 420 GKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD----AVAFNALAQ 475
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
GY+Q G KA +++ + G+ P+ G ++G ++K G
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETT-VQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
V +ALI+M+ KC ++ A +F+ +K VSWN ++G G A EA+ F++M
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
+ E F P +AVT V ++ A A L AL +G S+H+ ++ G S VG +L++ YAKCG
Sbjct: 596 KVEKFQP-NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS-QTPVGNSLVDMYAKCG 653
Query: 484 DAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLA 543
+S+ F + K V+W+ M+S Y G +++LF M + E +P+ V F SVL+
Sbjct: 654 MIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLS 713
Query: 544 ACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV 603
AC H+G+V EG R+F M ++HYACMVDLL +AG EA++ + +M V+ V
Sbjct: 714 ACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSV 773
Query: 604 SVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMI 663
V+GA L+ +H L A+ ++++L P L + Y+ D R G V V
Sbjct: 774 GVWGALLNSSRMHCNLWLSNAALCQLVKLEP-------LNPSHYSQDRRLGEVNNVSR-- 824
Query: 664 KQRGLNKVPGCSLVEI 679
+ KVP CS +E+
Sbjct: 825 ----IKKVPACSWIEV 836
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/590 (27%), Positives = 280/590 (47%), Gaps = 10/590 (1%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWY 100
CKN + + H SLIV G +L++ Y+ F +R +FD + P + + +M+R Y
Sbjct: 15 CKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGY 74
Query: 101 FLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSD 159
LH + + F+ G D F+ LKAC+ D + R+H + + G SD
Sbjct: 75 TRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESD 134
Query: 160 GFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE 219
++ LV+ Y K + SAR+VFD++ ++VV+W +M QN C+ L LF+ MR
Sbjct: 135 VYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRS 194
Query: 220 GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD 279
VD + ++ +L+ A +KL + +HG V+K G + +F ++ L++MY C D+
Sbjct: 195 CCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF-IFAF-SSGLIDMYCNCADLYA 252
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXX 339
A VF+E+ D+ SW M+ Y+ G + LELF + N
Sbjct: 253 AESVFEEVWRKDES----SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQ 308
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS 399
G+ +H V+ GL + V +L+ MY+KC + A +F +DVVS
Sbjct: 309 AAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVS 368
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA 459
W++ I+ Q+G EA+ +F+ M P+AVT+ VL CA + A LG SIH +A
Sbjct: 369 WSAMIASYEQAGQHDEAISLFRDMMRIHI-KPNAVTLTSVLQGCAGVAASRLGKSIHCYA 427
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGS 519
+K + S + TA+++ YAKCG A F+ + K+AV ++A+ GY GD +
Sbjct: 428 IKADIES-ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKA 486
Query: 520 IALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
++++M P+ +L C+ GS ++ + + F +++
Sbjct: 487 FDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKH-GFDSECHVAHALIN 545
Query: 580 LLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRM 629
+ + L A+ DK + + ++G LH + E R+M
Sbjct: 546 MFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/594 (29%), Positives = 300/594 (50%), Gaps = 35/594 (5%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIA 187
+ ++K + ++ QA +LH I++ + ++ Y+ + A +F +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
V++W S+ + + L F MR + S++ +CT + L G+
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD---ARKVFDEM----LTSDDE------- 293
VHG++V+ G+ + + +L+NMY K +G VFDEM S DE
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 294 ------------------LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXX 335
D+VS+ +I GY+Q G AL + + + P+
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 336 XXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK 395
G +HG V++ G+ + + ++L+DMYAK + D+ VF +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 396 DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
D +SWNS ++G Q+G EAL +F++M + P AV V+ ACA L L LG +
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP-GAVAFSSVIPACAHLATLHLGKQL 365
Query: 456 HAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGD 515
H + L+ G S +I++ +AL++ Y+KCG+ K+AR +FD M + V+W+A+I G+ + G
Sbjct: 366 HGYVLRGGFGS-NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 516 GVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYA 575
G +++LF +M ++ +PN+V F +VL ACSH G+V E F+ M + ++HYA
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 576 CMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPD 635
+ DLL RAG L+EA +FI KM V+P SV+ L C +H EL E ++ + +
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE 544
Query: 636 QACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYSKVT 689
YVL+ N+YAS+GRW + ++R ++++GL K P CS +E+ N T+ V+
Sbjct: 545 NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMK-NKTHGFVS 597
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 219/477 (45%), Gaps = 61/477 (12%)
Query: 11 SSKSLIQFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGDTK---LLS 67
SSK+LI+ TL PT K+ K+ HA I T ++S
Sbjct: 3 SSKALIK----------TLIKNPTR-----IKSKSQAKQLHAQFIRTQSLSHTSASIVIS 47
Query: 68 LYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLV 127
+Y + L A LF L SP + ++K+++R + +L S ++ + R + G D
Sbjct: 48 IYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRAS-GRCPDHN 106
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKC------------- 173
VF VLK+C+ + D+ +H +++ G D + N L++ Y+K
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF 166
Query: 174 ----------------GHVC-------SARKVFDEIAERNVVSWTSMFVAYVQNDCAVEG 210
C S R+VF+ + ++VVS+ ++ Y Q+ +
Sbjct: 167 DEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDA 226
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
LR+ M + + FT+ S++ ++ + +GK +HGYV++ GI + ++ +SL++M
Sbjct: 227 LRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDM 286
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y K I D+ +VF + D +SW +++ GY Q G +AL LF A + P
Sbjct: 287 YAKSARIEDSERVFSRLYCRDG----ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE 390
+G LHG V++ G N + +AL+DMY+KC + AR +F+
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 391 TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLG 447
D VSW + I G A G +EA+ +F+ M+ + P+ V V VL+AC+ +G
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK-PNQVAFVAVLTACSHVG 458
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 273/525 (52%), Gaps = 14/525 (2%)
Query: 161 FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE- 219
F N +V AY+K + AR++FDEI + + VS+ ++ Y + LF RMR+
Sbjct: 75 FSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL 134
Query: 220 GF-VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
GF VDG FT+ L+ AC L K +H + V G S + + + Y K G +
Sbjct: 135 GFEVDG--FTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXX 338
+A VF M D+ D VSW +MIV Y Q KAL L+ + + G +
Sbjct: 191 EAVSVFYGM---DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 339 XXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKC---HLVSDARYVFETTVQK 395
G HG ++K G N+ V + LID Y+KC + D+ VF+ +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 396 DVVSWNSFISGCAQSGS-AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
D+V WN+ ISG + + + EA++ F++M+ P D + V V SAC++L +
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDC-SFVCVTSACSNLSSPSQCKQ 366
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
IH A+K + S I V AL++ Y K G+ + AR VFD M E NAV+++ MI GY G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
G ++ L++ ML PN++ F +VL+AC+H G V EG F+ M P +HY
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 575 ACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP 634
+CM+DLL RAG L+EA FID MP +PG + A L C H L E A ++ + P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
A YV+++N+YA +W + VR+ ++ + + K PGCS +E+
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEV 591
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 232/504 (46%), Gaps = 38/504 (7%)
Query: 50 FHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYF-LNNLHSD 108
F ++IV + D+K+ AR+LFD +P P+ S+ ++ Y +
Sbjct: 75 FSYNVIVKAYAKDSKI----------HIARQLFDEIPQPDTVSYNTLISGYADARETFAA 124
Query: 109 VVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLV 167
+V F + + LGF D S ++ AC + D+++ +LHC + G S V N V
Sbjct: 125 MVLFKRMRK--LGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFV 180
Query: 168 DAYSKCGHVCSARKVFDEIAE-RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND 226
YSK G + A VF + E R+ VSW SM VAY Q+ + L L+ M +
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 227 FTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG---DIGDARKV 283
FT+ S++ A T L L G+ HG ++K+G H NS + + L++ Y KCG + D+ KV
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGH-PLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
F E+L+ DLV W MI GYS +A++ F G P+
Sbjct: 301 FQEILSP----DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACS 356
Query: 343 XXXXXXMGMLLHGLVVKCGLFDN-TPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWN 401
+HGL +K + N V NALI +Y K + DAR+VF+ + + VS+N
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFN 416
Query: 402 SFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK 461
I G AQ G EAL ++QRM + P+ +T V VLSACA G + G +
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLDSGIA-PNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 462 DGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGDGVGSI 520
+ + +++ + G + A D M K +V W+A++ G+
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL----------GAC 525
Query: 521 ALFRDMLKEECEPNEVVFTSVLAA 544
++M E NE++ LAA
Sbjct: 526 RKHKNMALAERAANELMVMQPLAA 549
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 194/460 (42%), Gaps = 85/460 (18%)
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG-------------------------- 275
L GK +H VKS + +++L+ +N+Y KCG
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 276 -----DIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
I AR++FDE+ + D VS+ +I GY+ A+ LF G +
Sbjct: 84 YAKDSKIHIARQLFDEI----PQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKC----------------GLFDN-TPVRNALI 373
G L GL+ C G FD+ + V NA +
Sbjct: 140 -------------------GFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFV 180
Query: 374 DMYAKCHLVSDARYVFETTVQ-KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPD 432
Y+K L+ +A VF + +D VSWNS I Q +AL +++ M + F D
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFK-ID 239
Query: 433 AVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK---SAR 489
T+ VL+A SL L G H +K G S +VG+ L++FY+KCG +
Sbjct: 240 MFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS-HVGSGLIDFYSKCGGCDGMYDSE 298
Query: 490 MVFDGMGEKNAVTWSAMISGYGMQGD-GVGSIALFRDMLKEECEPNEVVFTSVLAACSHS 548
VF + + V W+ MISGY M + ++ FR M + P++ F V +ACS+
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 549 GMVGEGSRLFHMMCRELNFVPSMKHYA--CMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
+ ++ + + + +PS + ++ L ++GNL++A D+MP VS F
Sbjct: 359 SSPSQCKQIHGLAIK--SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS-F 415
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVS 644
+ G H + +RML+ + P++ + ++S
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLS 455
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 45/334 (13%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV---------------- 393
G LH L VK + +T + N +++Y+KC +S AR F +T
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 394 ---------------QKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
Q D VS+N+ ISG A + + A+ +F+RMR F D T+ G
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE-VDGFTLSG 145
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE- 497
+++AC + L +H F++ G S S V A + +Y+K G + A VF GM E
Sbjct: 146 LIAACCD--RVDLIKQLHCFSVSGGFDSYS-SVNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 498 KNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRL 557
++ V+W++MI YG +G ++AL+++M+ + + + SVL A + + G R
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHL-IGGRQ 261
Query: 558 FHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDF--IDKMPVQPGVSVFGAYLHGCGL 615
FH + F + + ++D ++ G D + + + P + V+ + G +
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 616 HSEFELGEVAIRRMLEL----HPDQACYYVLVSN 645
+ EL E A++ ++ H C +V V++
Sbjct: 322 NE--ELSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 188/628 (29%), Positives = 310/628 (49%), Gaps = 94/628 (14%)
Query: 70 ASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVF 129
+ G + AR+LFD S ++ S+ +M+ YF N + D +
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF---------------- 71
Query: 130 SIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER 189
E+ D + NGLV Y K G + ARKVFD + ER
Sbjct: 72 -------DEMPD----------------RNIISWNGLVSGYMKNGEIDEARKVFDLMPER 108
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
NVVSWT++ YV N LF +M E N + ++ + G + ++
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
+ ++ TS+++ K G + +AR++FDEM E +++WT M+ GY Q
Sbjct: 165 EMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEM----SERSVITWTTMVTGYGQN 216
Query: 310 GHPLKALELF------TDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG-L 362
A ++F T+ +W +L MG + +G + L
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSML--------------------MGYVQNGRIEDAEEL 256
Query: 363 FDNTPVR-----NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEAL 417
F+ PV+ NA+I + ++ AR VF++ +++ SW + I ++G EAL
Sbjct: 257 FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEAL 316
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS----IYVGT 473
++F M+ + P T++ +LS CASL +L G +HA LV C +YV +
Sbjct: 317 DLFILMQKQGVRPT-FPTLISILSVCASLASLHHGKQVHA-----QLVRCQFDVDVYVAS 370
Query: 474 ALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDM-LKEECE 532
L+ Y KCG+ ++++FD K+ + W+++ISGY G G ++ +F +M L +
Sbjct: 371 VLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTK 430
Query: 533 PNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALD 592
PNEV F + L+ACS++GMV EG +++ M P HYACMVD+L RAG EA++
Sbjct: 431 PNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAME 490
Query: 593 FIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGR 652
ID M V+P +V+G+ L C HS+ ++ E ++++E+ P+ + Y+L+SN+YAS GR
Sbjct: 491 MIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGR 550
Query: 653 WGMVKQVREMIKQRGLNKVPGCSLVEID 680
W V ++R+++K R + K PGCS E++
Sbjct: 551 WADVAELRKLMKTRLVRKSPGCSWTEVE 578
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 203/447 (45%), Gaps = 27/447 (6%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS--FYHLTRYTLGF 122
L+S Y G + AR++FD +P N+ S+ A+++ Y ++N DV F+ +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGY-VHNGKVDVAESLFWKMPE----- 138
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKV 182
+ V ++++L + + A +L+ + D ++ K G V AR++
Sbjct: 139 -KNKVSWTVMLIGFLQDGRIDDACKLYEMI---PDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 183 FDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL 242
FDE++ER+V++WT+M Y QN+ + ++F+ M E + + S++ + G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE----KTEVSWTSMLMGYVQNGRI 250
Query: 243 HQGKWVHGYV-VKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
+ + + VK I N+ ++ + G+I AR+VFD M +D SW
Sbjct: 251 EDAEELFEVMPVKPVIACNAMISG-----LGQKGEIAKARRVFDSMKERND----ASWQT 301
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
+I + + G L+AL+LF G+ P G +H +V+C
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
+ V + L+ MY KC + ++ +F+ KD++ WNS ISG A G EAL++F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
M + P+ VT V LSAC+ G + G I+ V +++ +
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 482 CGDAKSARMVFDGMG-EKNAVTWSAMI 507
G A + D M E +A W +++
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 55/271 (20%)
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
P N I ++ + +AR +F++ K + SWNS ++G + +A ++F M
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM--- 74
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
PD +I L++ Y K G+
Sbjct: 75 ----PDR----------------------------------NIISWNGLVSGYMKNGEID 96
Query: 487 SARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
AR VFD M E+N V+W+A++ GY G + +LF M E N+V +T +L
Sbjct: 97 EARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFL 152
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
G + + +L+ M+ + N + M+ L + G + EA + D+M + V +
Sbjct: 153 QDGRIDDACKLYEMIPDKDNIART-----SMIHGLCKEGRVDEAREIFDEMS-ERSVITW 206
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLELHPDQA 637
+ G G ++ + R++ ++ P++
Sbjct: 207 TTMVTGYGQNNRVDDA----RKIFDVMPEKT 233
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/663 (28%), Positives = 324/663 (48%), Gaps = 56/663 (8%)
Query: 32 PPTLYLSPICKNIDTVKKFHASLIVHGFPGDT----------KLLSLYASFGFLRHARRL 81
P + +CK +K VHG+ + L +Y G L A ++
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 82 FDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRD 141
FD +P N ++ A++ Y N + + + + R G V S L A + +
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ-GVEPTRVTVSTCLSASANMGG 289
Query: 142 VVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVA 200
V + + H I +G D + L++ Y K G + A VFD + E++VV+W +
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 201 YVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVN 260
YVQ + + + MR + + T+ +L++A + +L GK V Y ++ +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 261 SFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFT 320
LA+++++MY KCG I DA+KVFD S E DL+ W ++ Y++ G +AL LF
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFD----STVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 321 DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCH 380
G+ PN V+ L + +RN +D
Sbjct: 466 GMQLEGVPPN--------------------------VITWNLIILSLLRNGQVD------ 493
Query: 381 LVSDARYVF----ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTV 436
+A+ +F + + +++SW + ++G Q+G + EA+ +F R ES P+A ++
Sbjct: 494 ---EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSI 549
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
LSACA L +L +G +IH + +++ S + + T+L++ YAKCGD A VF
Sbjct: 550 TVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKL 609
Query: 497 EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSR 556
+AMIS Y + G+ +IAL+R + +P+ + T+VL+AC+H+G + +
Sbjct: 610 YSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIE 669
Query: 557 LFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH 616
+F + + + P ++HY MVDLLA AG ++AL I++MP +P + + + C
Sbjct: 670 IFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQ 729
Query: 617 SEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSL 676
+ EL + R++LE P+ + YV +SN YA +G W V ++REM+K +GL K PGCS
Sbjct: 730 RKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSW 789
Query: 677 VEI 679
++I
Sbjct: 790 IQI 792
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 243/501 (48%), Gaps = 13/501 (2%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSG---PSDGFVLNGLVDAYSKCGHVCSARKVFD 184
++ +L+ C RD+ ++H ++K+G + ++ LV Y+KC + A +F
Sbjct: 72 IYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFS 131
Query: 185 EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQ 244
++ RNV SW ++ + L F M E + ++F V ++ AC L
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRF 191
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
G+ VHGYVVKSG+ F+A+SL +MY KCG + DA KVFDE+ + + V+W A++V
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI----PDRNAVAWNALMV 247
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
GY Q G +A+ LF+D G+ P G H + + G+
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
+ + +L++ Y K L+ A VF+ +KDVV+WN ISG Q G +A+ M Q MR
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
E D VT+ ++SA A L LG + + ++ S I + + +++ YAKCG
Sbjct: 368 LEKLK-YDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES-DIVLASTVMDMYAKCGS 425
Query: 485 AKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAA 544
A+ VFD EK+ + W+ +++ Y G ++ LF M E PN + + ++ +
Sbjct: 426 IVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILS 485
Query: 545 CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP---VQP 601
+G V E +F M + +P++ + M++ + + G +EA+ F+ KM ++P
Sbjct: 486 LLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 602 GVSVFGAYLHGCGLHSEFELG 622
L C + +G
Sbjct: 545 NAFSITVALSACAHLASLHIG 565
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 176/634 (27%), Positives = 292/634 (46%), Gaps = 60/634 (9%)
Query: 42 KNIDTVKKFHASLIVHG-FPG-----DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKA 95
+++ T K+ HA ++ +G F +TKL+ YA L A LF L N+ S+ A
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143
Query: 96 MLRWYFLNNL-HSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK 154
++ L ++ F + + F D V V KAC L+ +H +V+K
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEI--FPDNFVVPNVCKACGALKWSRFGRGVHGYVVK 201
Query: 155 SGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRL 213
SG D FV + L D Y KCG + A KVFDEI +RN V+W ++ V YVQN E +RL
Sbjct: 202 SGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRL 261
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
F+ MR+ V+ TV + ++A +G + +GK H + +G+ +++ L TSLLN Y K
Sbjct: 262 FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK 321
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
G I A VFD M E D+V+W +I GY Q+G A+ + + +
Sbjct: 322 VGLIEYAEMVFDRMF----EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVT 377
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV 393
+G + ++ + + + ++DMYAKC + DA+ VF++TV
Sbjct: 378 LATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTV 437
Query: 394 QKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGS 453
+KD++ WN+ ++ A+SG + EAL +F M+ E PP+ +T +L L L
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV-PPNVIT--------WNLIILSL-- 486
Query: 454 SIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGM 512
L++G V +AK + G N ++W+ M++G
Sbjct: 487 ------LRNGQVD-----------------EAKDMFLQMQSSGIIPNLISWTTMMNGMVQ 523
Query: 513 QGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMK 572
G +I R M + PN T L+AC+H + G + + R L +
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS 583
Query: 573 HYACMVDLLARAGNLKEALD-FIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE 631
+VD+ A+ G++ +A F K+ + +S A + L+ + +A+ R LE
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPLS--NAMISAYALYGNLKEA-IALYRSLE 640
Query: 632 ---LHPDQACYYVLVSNLYASDGRWGMVKQVREM 662
L PD + ++N+ ++ G + Q E+
Sbjct: 641 GVGLKPDN----ITITNVLSACNHAGDINQAIEI 670
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 404 ISGCAQSGSAYEALEMFQRM--RSESFSPPDAVTVVG-VLSACASLGALPLGSSIHAFAL 460
+S ++G EAL + M R+ P + G +L C L G IHA L
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPE----IYGEILQGCVYERDLSTGKQIHARIL 97
Query: 461 KDG-LVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGS 519
K+G + + Y+ T L+ FYAKC + A ++F + +N +W+A+I G G+
Sbjct: 98 KNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGA 157
Query: 520 IALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
+ F +ML+ E P+ V +V AC G R H + + + + D
Sbjct: 158 LMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG-RGVHGYVVKSGLEDCVFVASSLAD 216
Query: 580 LLARAGNLKEALDFIDKMPVQPGVS 604
+ + G L +A D++P + V+
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVA 241
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 186/556 (33%), Positives = 282/556 (50%), Gaps = 21/556 (3%)
Query: 129 FSIVLKACSELRDVVQ-AARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIA 187
F +LK C + + Q A++ H ++ N L+ + G + +F
Sbjct: 40 FLFLLKKCISVNQLRQIQAQMLLHSVEKP-------NFLIPKAVELGDFNYSSFLFSVTE 92
Query: 188 ERNVVSWTSMFVAYVQ--NDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG 245
E N S+ M ND L L+ RM+ + + FT + AC KL + G
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEA-ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVG 151
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
+ VH + K G+ + + SL+ MY KCG +G ARK+FDE+ E D VSW +MI G
Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI----TERDTVSWNSMISG 207
Query: 306 YSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDN 365
YS+ G+ A++LF G P+ G LL + + + +
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 267
Query: 366 TPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
T + + LI MY KC + AR VF ++KD V+W + I+ +Q+G + EA ++F M
Sbjct: 268 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
SP DA T+ VLSAC S+GAL LG I A + L +IYV T L++ Y KCG
Sbjct: 328 TGVSP-DAGTLSTVLSACGSVGALELGKQIETHASELSL-QHNIYVATGLVDMYGKCGRV 385
Query: 486 KSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAAC 545
+ A VF+ M KN TW+AMI+ Y QG ++ LF M P+++ F VL+AC
Sbjct: 386 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSAC 442
Query: 546 SHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSV 605
H+G+V +G R FH M VP ++HY ++DLL+RAG L EA +F+++ P +P +
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIM 502
Query: 606 FGAYLHGCGLHSEFELGEVAIRRMLEL-HPDQACYYVLVSNLYASDGRWGMVKQVREMIK 664
A L C + + E A+R ++E+ A YV+ SN+ A W ++R +++
Sbjct: 503 LAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMR 562
Query: 665 QRGLNKVPGCSLVEID 680
RG+ K PGCS +EI+
Sbjct: 563 DRGVVKTPGCSWIEIE 578
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 211/424 (49%), Gaps = 19/424 (4%)
Query: 35 LYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFK 94
L+L C +++ +++ A +++H L+ G ++ LF PN +SF
Sbjct: 41 LFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFN 100
Query: 95 AMLR-----WYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLH 149
M+R W N H +S Y +++ G D ++ V AC++L ++ +H
Sbjct: 101 YMIRGLTNTW----NDHEAALSLYRRMKFS-GLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 150 CHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAV 208
+ K G D + + L+ Y+KCG V ARK+FDEI ER+ VSW SM Y + A
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 209 EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLL 268
+ + LF +M E + ++ T+ S++ AC+ LG L G+ + + I +++FL + L+
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 269 NMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL 328
+MY KCGD+ AR+VF++M+ D V+WTAMI YSQ G +A +LF + G+
Sbjct: 276 SMYGKCGDLDSARRVFNQMIKKDR----VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 329 PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYV 388
P+ +G + + L N V L+DMY KC V +A V
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 389 FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA 448
FE K+ +WN+ I+ A G A EAL +F RM PP +T +GVLSAC G
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS----VPPSDITFIGVLSACVHAGL 447
Query: 449 LPLG 452
+ G
Sbjct: 448 VHQG 451
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 258/497 (51%), Gaps = 37/497 (7%)
Query: 213 LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYV 272
+ R+R + F+ ++ A +K+ +L +G +HG K + F+ T ++MY
Sbjct: 98 FYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYA 157
Query: 273 KCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXX 332
CG I AR VFDEM D+V+W MI Y + G +A +LF + + ++P+
Sbjct: 158 SCGRINYARNVFDEM----SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEM 213
Query: 333 XXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYA--------------- 377
++ +++ + +T + AL+ MYA
Sbjct: 214 ILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
Query: 378 ----------------KCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
KC + DA+ +F+ T +KD+V W + IS +S EAL +F+
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
M PD V++ V+SACA+LG L +H+ +GL S + + AL+N YAK
Sbjct: 334 EMCCSGIK-PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLES-ELSINNALINMYAK 391
Query: 482 CGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
CG + R VF+ M +N V+WS+MI+ M G+ +++LF M +E EPNEV F V
Sbjct: 392 CGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGV 451
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQP 601
L CSHSG+V EG ++F M E N P ++HY CMVDL RA L+EAL+ I+ MPV
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Query: 602 GVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVRE 661
V ++G+ + C +H E ELG+ A +R+LEL PD VL+SN+YA + RW V+ +R
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRR 571
Query: 662 MIKQRGLNKVPGCSLVE 678
+++++ + K G S ++
Sbjct: 572 VMEEKNVFKEKGLSRID 588
Score = 196 bits (497), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 255/553 (46%), Gaps = 55/553 (9%)
Query: 28 TLPHP-------PTLYLSPICKNIDTVKKFHA----SLIVHGFPGDTKLLSLYASFGFLR 76
TLP P L CK+++ +K+ HA ++I H LS+ +S L
Sbjct: 2 TLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLS 61
Query: 77 HARRLFDHLPSPNLH-SFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKA 135
+A +F +PSP F LR ++ + FY R+ G D F +LKA
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRL-DQFSFLPILKA 120
Query: 136 CSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSW 194
S++ + + LH K D FV G +D Y+ CG + AR VFDE++ R+VV+W
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 195 TSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK 254
+M Y + E +LF M++ V ++ + ++V+AC + G++ + ++ ++++
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 255 SGIHVNSFLATSLLNMYV-------------------------------KCGDIGDARKV 283
+ + +++ L T+L+ MY KCG + DA+ +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
FD+ ++ DLV WT MI Y + +P +AL +F + +GI P+
Sbjct: 301 FDQT----EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 344 XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSF 403
+H + GL + NALI+MYAKC + R VFE +++VVSW+S
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 404 ISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDG 463
I+ + G A +AL +F RM+ E+ P+ VT VGVL C+ G + G I A +
Sbjct: 417 INALSMHGEASDALSLFARMKQENVE-PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 464 LVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGD-GVGSIA 521
++ + +++ + + + A V + M N V W +++S + G+ +G A
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFA 535
Query: 522 LFRDMLKEECEPN 534
R + E EP+
Sbjct: 536 AKRIL---ELEPD 545
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 8/266 (3%)
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA 457
+ +N F+ ++S + +QR+R D + + +L A + + AL G +H
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVG-GRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
A K + C +V T ++ YA CG AR VFD M ++ VTW+ MI Y G
Sbjct: 136 VAFKIATL-CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKH-YAC 576
+ LF +M P+E++ ++++AC +G + ++ + N V H
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE--NDVRMDTHLLTA 252
Query: 577 MVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQ 636
+V + A AG + A +F KM V+ + V A + G + +V + + D
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQTEK--KDL 309
Query: 637 ACYYVLVSNLYASDGRWGMVKQVREM 662
C+ ++S SD ++ EM
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEM 335
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 296 bits (757), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 174/511 (34%), Positives = 270/511 (52%), Gaps = 49/511 (9%)
Query: 174 GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
G + A K+FDEI + +V + Q+ + + L+ M + V + +T ++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 234 TACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDE 293
AC+KL G HG VV+ G +N ++ +L+ + CGD+G A ++FD+ +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHK- 178
Query: 294 LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLL 353
V+W++M GY++RG +A+ LF + +P
Sbjct: 179 ---VAWSSMTSGYAKRGKIDEAMRLFDE------MP------------------------ 205
Query: 354 HGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSA 413
+ + N +I KC + AR +F+ +KDVV+WN+ ISG G
Sbjct: 206 ---------YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYP 256
Query: 414 YEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGT 473
EAL +F+ MR ++ PD VT++ +LSACA LG L G +H + L+ VS SIYVGT
Sbjct: 257 KEALGIFKEMR-DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 474 ----ALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE 529
AL++ YAKCG A VF G+ +++ TW+ +I G + GSI +F +M +
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRL 374
Query: 530 ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKE 589
+ PNEV F V+ ACSHSG V EG + F +M N P++KHY CMVD+L RAG L+E
Sbjct: 375 KVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEE 434
Query: 590 ALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYAS 649
A F++ M ++P V+ L C ++ ELG+ A ++L + D++ YVL+SN+YAS
Sbjct: 435 AFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYAS 494
Query: 650 DGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
G+W V++VR+M + K G SL+E D
Sbjct: 495 TGQWDGVQKVRKMFDDTRVKKPTGVSLIEED 525
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 224/496 (45%), Gaps = 61/496 (12%)
Query: 33 PTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLS--LYASF----GFLRHARRLFDHLP 86
P L+ + CKNI T+K+ HAS++V+G + ++ +Y++ G L++A +LFD +P
Sbjct: 16 PKLWQN--CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIP 73
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P++ +LR + VS Y G D F+ VLKACS+L
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEME-KRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 147 RLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
H V++ G + +V N L+ ++ CG + A ++FD+ A+ + V+W+SM Y +
Sbjct: 133 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 206 CAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLAT 265
E +RLF+ M + D + V ++T C
Sbjct: 193 KIDEAMRLFDEM--PYKDQVAWNV--MITGC----------------------------- 219
Query: 266 SLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWA 325
+KC ++ AR++FD E D+V+W AMI GY G+P +AL +F + A
Sbjct: 220 ------LKCKEMDSARELFDRFT----EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDA 269
Query: 326 GILPNXXXXXXXXXXXXXXXXXXMGMLLHGLV-----VKCGLFDNTPVRNALIDMYAKCH 380
G P+ G LH + V ++ TP+ NALIDMYAKC
Sbjct: 270 GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 329
Query: 381 LVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
+ A VF +D+ +WN+ I G A A ++EMF+ M+ P+ VT +GV+
Sbjct: 330 SIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVW-PNEVTFIGVI 387
Query: 441 SACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKN 499
AC+ G + G + + +I +++ + G + A M + M E N
Sbjct: 388 LACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPN 447
Query: 500 AVTWSAMISGYGMQGD 515
A+ W ++ + G+
Sbjct: 448 AIVWRTLLGACKIYGN 463
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 136/330 (41%), Gaps = 26/330 (7%)
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDA-RY---VFETTVQKDVVSWNSFISGCA 408
+H +V GL N V LI Y+ V A +Y +F+ + DV N + G A
Sbjct: 31 IHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
QS + + ++ M SP D T VL AC+ L G + H ++ G V +
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSP-DRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV-LN 146
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
YV AL+ F+A CGD A +FD + + V WS+M SGY +G ++ LF +M
Sbjct: 147 EYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY 206
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
++ +V + ++ C + LF + + + M+ G K
Sbjct: 207 KD----QVAWNVMITGCLKCKEMDSARELFDRFTEK-----DVVTWNAMISGYVNCGYPK 257
Query: 589 EALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYV---- 641
EAL +M P V + L C + + E G+ +LE + YV
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 642 --LVSNLYASDGRWGMVKQVREMIKQRGLN 669
+ ++YA G +V +K R L+
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 184/617 (29%), Positives = 303/617 (49%), Gaps = 45/617 (7%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
++ Y++ L A +LF P N S+ A++ Y + + + + + + G
Sbjct: 65 MIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ-SDGIKP 123
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVF 183
+ VL+ C+ L +++ ++H H IK+G D V+NGL+ Y++C + A +F
Sbjct: 124 NEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLF 183
Query: 184 DEI-AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL 242
+ + E+N V+WTSM Y QN A + + F +R N +T S++TAC + +
Sbjct: 184 ETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
G VH +VKSG N ++ ++L++MY KC ++ AR + + M D +VSW +M
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDD----VVSWNSM 299
Query: 303 IVGYSQRGHPLKALELFTDRNWAGI-LPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
IVG ++G +AL +F + + + + + H L+VK G
Sbjct: 300 IVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTG 359
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
V NAL+DMYAK ++ A VFE ++KDV+SW + ++G +GS EAL++F
Sbjct: 360 YATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFC 419
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
MR +P D + VLSA A L L G +H +K G S S+ V +L+ Y K
Sbjct: 420 NMRVGGITP-DKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS-SLSVNNSLVTMYTK 477
Query: 482 CGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
CG + A ++F+ M ++ +TW+ +I GY
Sbjct: 478 CGSLEDANVIFNSMEIRDLITWTCLIVGY------------------------------- 506
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQP 601
+ +G++ + R F M P +HYACM+DL R+G+ + + +M V+P
Sbjct: 507 ----AKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEP 562
Query: 602 GVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVRE 661
+V+ A L H E GE A + ++EL P+ A YV +SN+Y++ GR VR
Sbjct: 563 DATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRR 622
Query: 662 MIKQRGLNKVPGCSLVE 678
++K R ++K PGCS VE
Sbjct: 623 LMKSRNISKEPGCSWVE 639
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 184/386 (47%), Gaps = 14/386 (3%)
Query: 48 KKFHASLIVHGFPGDTK----LLSLYASFGFLRHARRLFDHLP-SPNLHSFKAMLRWYFL 102
++ H I GF D LL++YA + A LF+ + N ++ +ML Y
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGF 161
N + + R G + F VL AC+ + ++HC ++KSG ++ +
Sbjct: 205 NGFAFKAIECFRDLRRE-GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
V + L+D Y+KC + SAR + + + +VVSW SM V V+ E L +F RM E
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 222 VDGNDFTVGSLVTACTKLG--SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD 279
+ +DFT+ S++ C L + H +VK+G + +L++MY K G +
Sbjct: 324 MKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDS 382
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXX 339
A KVF+ M+ E D++SWTA++ G + G +AL+LF + GI P+
Sbjct: 383 ALKVFEGMI----EKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS 399
G +HG +K G + V N+L+ MY KC + DA +F + +D+++
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT 498
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRS 425
W I G A++G +A F MR+
Sbjct: 499 WTCLIVGYAKNGLLEDAQRYFDSMRT 524
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 184/381 (48%), Gaps = 35/381 (9%)
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL---------- 294
G +H Y ++ +H N LL K G + +AR++FD+M D+
Sbjct: 17 GSCIHSYADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 295 -----------------DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXX 337
+ +SW A+I GY + G ++A LF + GI PN
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV-QKD 396
G +HG +K G + V N L+ MYA+C +S+A Y+FET +K+
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
V+W S ++G +Q+G A++A+E F+ +R E + + T VL+ACAS+ A +G +H
Sbjct: 192 NVTWTSMLTGYSQNGFAFKAIECFRDLRREG-NQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDG 516
+K G + +IYV +AL++ YAKC + +SAR + +GM + V+W++MI G QG
Sbjct: 251 CCIVKSGFKT-NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLI 309
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC 576
++++F M + + + ++ S+L + S + + H + + +
Sbjct: 310 GEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA 369
Query: 577 MVDLLARAGNLKEALDFIDKM 597
+VD+ A+ G + AL + M
Sbjct: 370 LVDMYAKRGIMDSALKVFEGM 390
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 300/602 (49%), Gaps = 46/602 (7%)
Query: 115 LTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG--PSDGFVLNGLVDAYSK 172
++ T +D F +L C + Q +LH I G P+ F V S+
Sbjct: 23 MSTITESISNDYSRFISILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSR 79
Query: 173 CG-HVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLF-NRMREGFVDGNDFTVG 230
G HV A K+F +I E +VV W +M + + DC EG+RL+ N ++EG V + T
Sbjct: 80 LGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG-VTPDSHTFP 138
Query: 231 SLVTACTKLG-SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
L+ + G +L GK +H +VVK G+ N ++ +L+ MY CG + AR VFD
Sbjct: 139 FLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK 198
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
D + SW MI GY++ +++EL + + P +
Sbjct: 199 ED----VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL 254
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
+H V +C + + NAL++ YA C + A +F + +DV+SW S + G +
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVE 314
Query: 410 SGSAY-------------------------------EALEMFQRMRSESFSPPDAVTVVG 438
G+ E+LE+F+ M+S P D T+V
Sbjct: 315 RGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP-DEFTMVS 373
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK 498
VL+ACA LG+L +G I + K+ + + + VG AL++ Y KCG ++ A+ VF M ++
Sbjct: 374 VLTACAHLGSLEIGEWIKTYIDKNKIKN-DVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 499 NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF 558
+ TW+AM+ G G G +I +F M +P+++ + VL+AC+HSGMV + + F
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 559 HMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSE 618
M + PS+ HY CMVD+L RAG +KEA + + KMP+ P V+GA L LH++
Sbjct: 493 AKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND 552
Query: 619 FELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
+ E+A +++LEL PD Y L+ N+YA RW +++VR I + K PG SL+E
Sbjct: 553 EPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Query: 679 ID 680
++
Sbjct: 613 VN 614
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 224/514 (43%), Gaps = 42/514 (8%)
Query: 40 ICKNIDTVKKFHASLIVHGF-PGDT---KLLSLYASF--GFLRHARRLFDHLPSPNLHSF 93
+CK D K+ H+ I G P T KL + S G + +A +LF +P P++ +
Sbjct: 43 VCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVW 102
Query: 94 KAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRD---VVQAARLHC 150
M++ + + + V Y L G D F +L RD + +LHC
Sbjct: 103 NNMIKGWSKVDCDGEGVRLY-LNMLKEGVTPDSHTFPFLLNGLK--RDGGALACGKKLHC 159
Query: 151 HVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVE 209
HV+K G S+ +V N LV YS CG + AR VFD + +V SW M Y + E
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 219
Query: 210 GLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLN 269
+ L M V T+ +++AC+K+ K VH YV + + L +L+N
Sbjct: 220 SIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVN 279
Query: 270 MYVKCGDIGDARKVFDEMLTSD------------------------DEL---DLVSWTAM 302
Y CG++ A ++F M D D++ D +SWT M
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
I GY + G ++LE+F + AG++P+ +G + + K +
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 399
Query: 363 FDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
++ V NALIDMY KC A+ VF Q+D +W + + G A +G EA+++F +
Sbjct: 400 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 459
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKC 482
M+ S P D +T +GVLSAC G + A D + S+ +++ +
Sbjct: 460 MQDMSIQPDD-ITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA 518
Query: 483 GDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGD 515
G K A + M N++ W A++ + D
Sbjct: 519 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHND 552
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/587 (30%), Positives = 313/587 (53%), Gaps = 15/587 (2%)
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACS-ELRDVVQAARLHCHVIKSGPS-DG 160
+ + + + Y L ++LG + V+KAC+ + + A+LHC +K+G D
Sbjct: 23 DQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDT 82
Query: 161 FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR-E 219
V N L+ Y+K + RKVFDE+ R+ VS+ S+ + Q+ E ++L M
Sbjct: 83 VVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFY 142
Query: 220 GFVDGNDFTVGSLVTACTKLGSLHQ-GKWVHGYV-VKSGIHVNSFLATSLLNMYVKCGDI 277
GF+ ++ V SL+ CT++GS + + H V V + + L+T+L++MY+K D
Sbjct: 143 GFIPKSEL-VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDH 201
Query: 278 GDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXX 337
A VFD+M ++ VSWTAMI G + ++LF + PN
Sbjct: 202 AAAFHVFDQMEVKNE----VSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 338 XXX-XXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKD 396
+ +HG + G + + A + MY +C VS +R +FET+ +D
Sbjct: 258 LPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRD 317
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
VV W+S ISG A++G E + + +MR E ++VT++ ++SAC + L S++H
Sbjct: 318 VVMWSSMISGYAETGDCSEVMNLLNQMRKEGI-EANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDG 516
+ LK G +S I +G AL++ YAKCG +AR VF + EK+ V+WS+MI+ YG+ G G
Sbjct: 377 SQILKCGFMS-HILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG 435
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC 576
++ +F+ M+K E +++ F ++L+AC+H+G+V E +F + + +++HYAC
Sbjct: 436 SEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYAC 494
Query: 577 MVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFEL-GEVAIRRMLELHPD 635
++LL R G + +A + MP++P ++ + L C H ++ G++ +++ PD
Sbjct: 495 YINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPD 554
Query: 636 QACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLN 682
YVL+S ++ G + ++VR ++++R LNK G S +E +L
Sbjct: 555 NPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQ 601
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 225/511 (44%), Gaps = 19/511 (3%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
L+S+YA F R++FD + + S+ +++ + L + + Y GF
Sbjct: 88 LISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIK-EMYFYGFIP 146
Query: 125 DLVVFSIVLKACSELRDVVQAARL-HCHVIKSGPSDGFVL--NGLVDAYSKCGHVCSARK 181
+ + +L C+ + + AR+ H V+ VL LVD Y K +A
Sbjct: 147 KSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFH 206
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL-- 239
VFD++ +N VSWT+M V N G+ LF M+ + N T+ S++ AC +L
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNY 266
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
GS K +HG+ + G H + L + + MY +CG++ +R +F+ + D+V W
Sbjct: 267 GS-SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFE----TSKVRDVVMW 321
Query: 300 TAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
++MI GY++ G + + L GI N +H ++K
Sbjct: 322 SSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK 381
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
CG + + NALIDMYAKC +S AR VF +KD+VSW+S I+ G EALE+
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEI 441
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL-VSCSIYVGTALLNF 478
F+ M D + + +LSAC G + +I A K + V+ Y +N
Sbjct: 442 FKGMIKGGHEVDD-MAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHY--ACYINL 498
Query: 479 YAKCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQG--DGVGSIALFRDMLKEECEPNE 535
+ G A V M K +A WS+++S G D G I M E P
Sbjct: 499 LGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPAN 558
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELN 566
V S + S + E R M R+LN
Sbjct: 559 YVLLSKIHTESGNYHAAEEVRRV-MQRRKLN 588
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 14/280 (5%)
Query: 48 KKFHASLIVHGFPGDTKLLS-----LYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFL 102
+ FHA ++V ++ LLS +Y F A +FD + N S+ AM+
Sbjct: 169 RMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVA 228
Query: 103 N-NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELR-DVVQAARLHCHVIKSG-PSD 159
N N V F + R L + V VL AC EL +H + G +D
Sbjct: 229 NQNYEMGVDLFRAMQRENLR--PNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHAD 286
Query: 160 GFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE 219
+ + Y +CG+V +R +F+ R+VV W+SM Y + E + L N+MR+
Sbjct: 287 ERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRK 346
Query: 220 GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD 279
++ N T+ ++V+ACT L VH ++K G + L +L++MY KCG +
Sbjct: 347 EGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSA 406
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF 319
AR+VF E+ E DLVSW++MI Y GH +ALE+F
Sbjct: 407 AREVFYEL----TEKDLVSWSSMINAYGLHGHGSEALEIF 442
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 260/494 (52%), Gaps = 11/494 (2%)
Query: 202 VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
+Q+ C L+ R+ + T L+ C SL VH +++ +G +
Sbjct: 53 IQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDP 112
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
FLAT L+ MY G + ARKVFD+ + + W A+ + GH + L L+
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKT----RKRTIYVWNALFRALTLAGHGEEVLGLYWK 168
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXX----XMGMLLHGLVVKCGLFDNTPVRNALIDMYA 377
N G+ + G +H + + G + + L+DMYA
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA 228
Query: 378 KCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESF-SPPDAVTV 436
+ V A YVF ++VVSW++ I+ A++G A+EAL F+ M E+ S P++VT+
Sbjct: 229 RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
V VL ACASL AL G IH + L+ GL S + V +AL+ Y +CG + + VFD M
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSI-LPVISALVTMYGRCGKLEVGQRVFDRMH 347
Query: 497 EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSR 556
+++ V+W+++IS YG+ G G +I +F +ML P V F SVL ACSH G+V EG R
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 557 LFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH 616
LF M R+ P ++HYACMVDLL RA L EA + M +PG V+G+ L C +H
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIH 467
Query: 617 SEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSL 676
EL E A RR+ L P A YVL++++YA W VK+V+++++ RGL K+PG
Sbjct: 468 GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCW 527
Query: 677 VEIDLNDTYSKVTI 690
+E+ YS V++
Sbjct: 528 MEVR-RKMYSFVSV 540
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 154/294 (52%), Gaps = 18/294 (6%)
Query: 49 KFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
+ H ++ +G D TKL+ +Y+ G + +AR++FD ++ + A+ R L
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 105 LHSDVVSFY-HLTRYTLGFFHDLVVFSIVLKAC--SE--LRDVVQAARLHCHVIKSG-PS 158
+V+ Y + R +G D ++ VLKAC SE + +++ +H H+ + G S
Sbjct: 158 HGEEVLGLYWKMNR--IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
+++ LVD Y++ G V A VF + RNVVSW++M Y +N A E LR F M
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 219 EGFVDG--NDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGD 276
D N T+ S++ AC L +L QGK +HGY+++ G+ + ++L+ MY +CG
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 277 IGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
+ ++VFD M + D+VSW ++I Y G+ KA+++F + G P
Sbjct: 336 LEVGQRVFDRM----HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 7/250 (2%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K+ HA L G+ T L+ +YA FG + +A +F +P N+ S+ AM+ Y N
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKN 261
Query: 104 NLHSDVV-SFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF- 161
+ + +F + R T + V VL+AC+ L + Q +H ++++ G
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP 321
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
V++ LV Y +CG + ++VFD + +R+VVSW S+ +Y + + +++F M
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS-GIHVNSFLATSLLNMYVKCGDIGDA 280
T S++ AC+ G + +GK + + + GI ++++ + + +A
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEA 441
Query: 281 RKVFDEMLTS 290
K+ +M T
Sbjct: 442 AKMVQDMRTE 451
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/452 (37%), Positives = 246/452 (54%), Gaps = 13/452 (2%)
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC---GDIGDARKVFDEML 288
L++ C L L Q + Y +KS I SF+A L+N + + AR +F+ M
Sbjct: 35 LISKCNSLRELMQ---IQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHLFEAM- 89
Query: 289 TSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXX 348
E D+V + +M GYS+ +PL+ LF + GILP+
Sbjct: 90 ---SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALE 146
Query: 349 MGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCA 408
G LH L +K GL DN V LI+MY +C V AR VF+ V+ VV +N+ I+G A
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYA 206
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
+ EAL +F+ M+ + + P+ +T++ VLS+CA LG+L LG IH +A K
Sbjct: 207 RRNRPNEALSLFREMQGK-YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK-Y 264
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
+ V TAL++ +AKCG A +F+ M K+ WSAMI Y G S+ +F M
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
E +P+E+ F +L ACSH+G V EG + F M + VPS+KHY MVDLL+RAGNL+
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
Query: 589 EALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYA 648
+A +FIDK+P+ P ++ L C H+ +L E R+ EL YV++SNLYA
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 649 SDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+ +W V +R+++K R KVPGCS +E++
Sbjct: 445 RNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVN 476
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 176/364 (48%), Gaps = 16/364 (4%)
Query: 75 LRHARRLFDHLPSPNLHSFKAMLRWY--FLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIV 132
+ +AR LF+ + P++ F +M R Y F N L +V S + + G D F +
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPL--EVFSLF-VEILEDGILPDNYTFPSL 135
Query: 133 LKACSELRDVVQAARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNV 191
LKAC+ + + + +LHC +K G D +V L++ Y++C V SAR VFD I E V
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 192 VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGY 251
V + +M Y + + E L LF M+ ++ N+ T+ S++++C LGSL GKW+H Y
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
K + T+L++M+ KCG + DA +F++M D + +W+AMIV Y+ G
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ----AWSAMIVAYANHGK 311
Query: 312 PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG-MLLHGLVVKCGLFDNTPVRN 370
K++ +F + P+ G +V K G+ +
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYG 371
Query: 371 ALIDMYAKCHLVSDA-RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS 429
+++D+ ++ + DA ++ + + + W ++ C S++ L++ +++ F
Sbjct: 372 SMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAAC----SSHNNLDLAEKVSERIFE 427
Query: 430 PPDA 433
D+
Sbjct: 428 LDDS 431
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 126/265 (47%), Gaps = 7/265 (2%)
Query: 32 PPTLYLSPICKNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPS 87
P L + K ++ ++ H + G + L+++Y + AR +FD +
Sbjct: 133 PSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE 192
Query: 88 PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAAR 147
P + + AM+ Y N ++ +S + + +++ + S VL +C+ L +
Sbjct: 193 PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLS-VLSSCALLGSLDLGKW 251
Query: 148 LHCHVIKSGPSDGFVLN-GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDC 206
+H + K +N L+D ++KCG + A +F+++ ++ +W++M VAY +
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 207 AVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG-KWVHGYVVKSGIHVNSFLAT 265
A + + +F RMR V ++ T L+ AC+ G + +G K+ V K GI +
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYG 371
Query: 266 SLLNMYVKCGDIGDARKVFDEMLTS 290
S++++ + G++ DA + D++ S
Sbjct: 372 SMVDLLSRAGNLEDAYEFIDKLPIS 396
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 295/594 (49%), Gaps = 43/594 (7%)
Query: 125 DLVVFSI--VLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARK 181
DLV+ S +L AC ++R + ++H H I SG VL LV YS A+
Sbjct: 40 DLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQS 99
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
+ + + + W + +Y +N+ E + + RM + + FT S++ AC +
Sbjct: 100 IIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLD 159
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
+ G+ VHG + S + ++ +L++MY + ++G AR++FD M E D VSW A
Sbjct: 160 VAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMF----ERDAVSWNA 215
Query: 302 MIVGYSQRGHPLKALELFTDR-----------------------NWAGILP--------- 329
+I Y+ G +A ELF N+ G L
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFP 275
Query: 330 ---NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDAR 386
+ +G +HGL + VRN LI MY+KC + A
Sbjct: 276 TSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHAL 335
Query: 387 YVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
VF T + + +WNS ISG AQ + EA + + M F P +++T+ +L CA +
Sbjct: 336 IVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP-NSITLASILPLCARI 394
Query: 447 GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAM 506
L G H + L+ + +L++ YAK G +A+ V D M +++ VT++++
Sbjct: 395 ANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSL 454
Query: 507 ISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELN 566
I GYG QG+G ++ALF++M + +P+ V +VL+ACSHS +V EG RLF M E
Sbjct: 455 IDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYG 514
Query: 567 FVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAI 626
P ++H++CMVDL RAG L +A D I MP +P + + L+ C +H ++G+ A
Sbjct: 515 IRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAA 574
Query: 627 RRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
++LE+ P+ YYVL++N+YA+ G W + +VR +++ G+ K PGC+ ++ D
Sbjct: 575 EKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTD 628
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 214/491 (43%), Gaps = 46/491 (9%)
Query: 64 KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFF 123
KL++ Y++F A+ + ++ + + ++ Y N L +V++ Y + G
Sbjct: 83 KLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK-RMVSKGIR 141
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHV-IKSGPSDGFVLNGLVDAYSKCGHVCSARKV 182
D + VLKAC E DV +H + + S S +V N L+ Y + ++ AR++
Sbjct: 142 PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRL 201
Query: 183 FDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFT-------------- 228
FD + ER+ VSW ++ Y E LF++M V+ + T
Sbjct: 202 FDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNY 261
Query: 229 VGSL---------------------VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSL 267
VG+L + AC+ +G++ GK +HG + S + +L
Sbjct: 262 VGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTL 321
Query: 268 LNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGI 327
+ MY KC D+ A VF + +E L +W ++I GY+Q +A L + AG
Sbjct: 322 ITMYSKCKDLRHALIVFRQT----EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 328 LPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF-DNTPVRNALIDMYAKCHLVSDAR 386
PN G H +++ F D T + N+L+D+YAK + A+
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 387 YVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
V + ++D V++ S I G G AL +F+ M + S PD VTVV VLSAC+
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM-TRSGIKPDHVTVVAVLSACSHS 496
Query: 447 GALPLGSSIH-AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWS 504
+ G + + G+ C + + +++ Y + G A+ + M K + TW+
Sbjct: 497 KLVHEGERLFMKMQCEYGIRPCLQHF-SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWA 555
Query: 505 AMISGYGMQGD 515
+++ + G+
Sbjct: 556 TLLNACHIHGN 566
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 48 KKFHASLIVHGFPG----DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K+ H I + G L+++Y+ LRHA +F +L ++ +++ Y
Sbjct: 300 KEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQL 359
Query: 104 NLHSDVVSFYHLTRYTL--GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF 161
N + HL R L GF + + + +L C+ + ++ HC++++ +
Sbjct: 360 NKSEEAS---HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDY 416
Query: 162 VL--NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE 219
+ N LVD Y+K G + +A++V D +++R+ V++TS+ Y L LF M
Sbjct: 417 TMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTR 476
Query: 220 GFVDGNDFTVGSLVTACTKLGSLHQGK 246
+ + TV ++++AC+ +H+G+
Sbjct: 477 SGIKPDHVTVVAVLSACSHSKLVHEGE 503
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 260/447 (58%), Gaps = 11/447 (2%)
Query: 239 LGSLHQGKWVHGYVVKSGIHV-NSFLATSLLNMYVKCGD---IGDARKVFDEMLTSDDEL 294
+ S+ + + +H + ++ G+ + ++ L L+ V + A KVF ++ + +
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKI---EKPI 83
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL-PNXXXXXXXXXXXXXXXXXXMGMLL 353
++ W +I GY++ G+ + A L+ + +G++ P+ +G +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 354 HGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSA 413
H +V++ G V+N+L+ +YA C V+ A VF+ +KD+V+WNS I+G A++G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 414 YEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGT 473
EAL ++ M S+ P D T+V +LSACA +GAL LG +H + +K GL +++
Sbjct: 204 EEALALYTEMNSKGIKP-DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSN 261
Query: 474 ALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE-CE 532
LL+ YA+CG + A+ +FD M +KN+V+W+++I G + G G +I LF+ M E
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 321
Query: 533 PNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALD 592
P E+ F +L ACSH GMV EG F M E P ++H+ CMVDLLARAG +K+A +
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 593 FIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGR 652
+I MP+QP V ++ L C +H + +L E A ++L+L P+ + YVL+SN+YAS+ R
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQR 441
Query: 653 WGMVKQVREMIKQRGLNKVPGCSLVEI 679
W V+++R+ + + G+ KVPG SLVE+
Sbjct: 442 WSDVQKIRKQMLRDGVKKVPGHSLVEV 468
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 200/440 (45%), Gaps = 29/440 (6%)
Query: 43 NIDTVKKFHASLIVHGFPGDTKLLSLYASFGF--------LRHARRLFDHLPSP-NLHSF 93
+I +++ HA I HG L + F + +A ++F + P N+ +
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 94 KAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVI 153
++R Y S Y R + D + ++KA + + DV +H VI
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 154 KSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR 212
+SG S +V N L+ Y+ CG V SA KVFD++ E+++V+W S+ + +N E L
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 213 LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYV 272
L+ M + + FT+ SL++AC K+G+L GK VH Y++K G+ N + LL++Y
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 273 KCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD-RNWAGILPNX 331
+CG + +A+ +FDEM+ + VSWT++IVG + G +A+ELF + G+LP
Sbjct: 269 RCGRVEEAKTLFDEMVDKNS----VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP-- 322
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR------NALIDMYAKCHLVSDA 385
GM+ G + + + ++D+ A+ V A
Sbjct: 323 ---CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 386 -RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
Y+ +Q +VV W + + C G + L F R++ P + V + + A
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDS--DLAEFARIQILQLEPNHSGDYVLLSNMYA 437
Query: 445 SLGALPLGSSIHAFALKDGL 464
S I L+DG+
Sbjct: 438 SEQRWSDVQKIRKQMLRDGV 457
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/631 (31%), Positives = 303/631 (48%), Gaps = 102/631 (16%)
Query: 133 LKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKC------------------ 173
L +C+ DV ++HC V+KSG S+G++ N +++ Y+KC
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 174 --------GHVCSAR-----KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREG 220
G+V S R K+FD + ER+ VS+T++ Y QN+ E + LF MR
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 221 FVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDA 280
+ N+ T+ ++++AC+ LG + + + +K + F++T+LL+MY C + DA
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF---TDRN---WA--------- 325
RK+FDEM E +LV+W M+ GYS+ G +A ELF T+++ W
Sbjct: 228 RKLFDEM----PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 326 ----------------GILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG-------- 361
G+ P+ G+ LHG +VK G
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 362 -----------------------LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVV 398
+ D+ RNALI + K +V AR VF+ T KD+
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 399 SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAF 458
SWN+ ISG AQS S AL +F+ M S S PDA+T+V V SA +SLG+L G H +
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 459 ALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVT---WSAMISGYGMQGD 515
L + + + A+++ YAKCG ++A +F ++ T W+A+I G G
Sbjct: 464 -LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 516 GVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYA 575
++ L+ D+ +PN + F VL+AC H+G+V G F M + P +KHY
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYG 582
Query: 576 CMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPD 635
CMVDLL +AG L+EA + I KMPV+ V ++G L H E+ E+A + + P
Sbjct: 583 CMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPS 642
Query: 636 QACYYVLVSNLYASDGRWGMVKQVREMIKQR 666
V++SN+YA GRW V VRE ++ R
Sbjct: 643 HGGCKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/568 (24%), Positives = 216/568 (38%), Gaps = 143/568 (25%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
S + +C + G+ +H V+KSG+ N ++ S+LNMY KC + DA VF +
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 291 D------------------DELDL---------VSWTAMIVGYSQRGHPLKALELFTDRN 323
D D L L VS+T +I GY+Q +A+ELF +
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 324 WAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC----------------------- 360
GI+ N +L L +K
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 361 ---GLFDNTPVR-----NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS 412
LFD P R N +++ Y+K L+ A +F+ +KD+VSW + I GC +
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
EAL + M P + V +V +LSA A G +H +K G C ++
Sbjct: 286 LDEALVYYTEMLRCGMKPSE-VMMVDLLSASARSVGSSKGLQLHGTIVKRGF-DCYDFLQ 343
Query: 473 TALLNFYAKCGDAK-------------------------------SARMVFDGMGEKNAV 501
+++FYA D K AR VFD +K+
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 502 TWSAMISGYGMQGDGVGSIALFRDML-KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
+W+AMISGY ++ LFR+M+ + +P+ + SV +A S G + EG R
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 561 MCRELNFV---PSMKHYACMVDLLARAGNLKEALDF------------------------ 593
LNF P+ A ++D+ A+ G+++ AL+
Sbjct: 464 ----LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 594 -------------IDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELH---PDQA 637
+ +P++P F L C ELG+ M H PD
Sbjct: 520 HGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIK 579
Query: 638 CYYVLVSNLYASDGRWGMVKQVREMIKQ 665
Y +V L G+ G +++ +EMIK+
Sbjct: 580 HYGCMVDLL----GKAGRLEEAKEMIKK 603
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 215/516 (41%), Gaps = 79/516 (15%)
Query: 73 GFLRHAR-----RLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLV 127
G++R R +LFD +P + S+ +++ Y NN S+ + + R LG + V
Sbjct: 116 GYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR-NLGIMLNEV 174
Query: 128 VFSIVLKACSEL--------------------RDVVQAARLH----CHVIKSG------- 156
+ V+ ACS L R V LH C +K
Sbjct: 175 TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEM 234
Query: 157 PSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFN 215
P V N +++ YSK G + A ++FD+I E+++VSW +M ++ + E L +
Sbjct: 235 PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 294
Query: 216 RMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY---- 271
M + ++ + L++A + +G +HG +VK G FL ++++ Y
Sbjct: 295 EMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN 354
Query: 272 ---------------------------VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
VK G + AR+VFD+ T D D+ SW AMI
Sbjct: 355 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ--THDK--DIFSWNAMIS 410
Query: 305 GYSQRGHPLKALELFTDR-NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
GY+Q P AL LF + + + + P+ G H + +
Sbjct: 411 GYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP 470
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETT--VQKDVVS-WNSFISGCAQSGSAYEALEMF 420
N + A+IDMYAKC + A +F T + +S WN+ I G A G A AL+++
Sbjct: 471 PNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLY 530
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
++S P+++T VGVLSAC G + LG + D + I +++
Sbjct: 531 SDLQSLPI-KPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 589
Query: 481 KCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGD 515
K G + A+ + M K + + W ++S G+
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 70/299 (23%)
Query: 436 VVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKC---GDAKS----- 487
+V L +CAS + G IH LK GL S + Y+ ++LN YAKC DA+S
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDS-NGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 488 -----------------------ARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFR 524
A +FD M E++ V+++ +I GY ++ LFR
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 525 DMLKEECEPNEVVFTSVLAACSH-------------------SGMVGEGSRLFHMMC--- 562
+M NEV +V++ACSH G V + L HM C
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 563 -----REL-NFVP--SMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCG 614
R+L + +P ++ + M++ ++AG +++A + D++ + VS +G + GC
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVS-WGTMIDGCL 281
Query: 615 LHSEFELGEVAIRRMLE--LHPDQACYYVLVSNLYASDGRWGMVK--QVREMIKQRGLN 669
++ + V ML + P + ++V L AS G K Q+ I +RG +
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPSEV---MMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 12/254 (4%)
Query: 47 VKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLH 106
+++F AS+ H L++ + G + AR +FD ++ S+ AM+ Y +L
Sbjct: 360 LQQFEASVKDH-IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGY-AQSLS 417
Query: 107 SDVVSFYHLTRYTLGFFH---DLVVFSIVLKACSELRDVVQAARLHCHV-IKSGPSDGFV 162
+ HL R + D + V A S L + + R H ++ + P + +
Sbjct: 418 PQLA--LHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL 475
Query: 163 LNGLVDAYSKCGHVCSARKVFDE---IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE 219
++D Y+KCG + +A +F + I+ + W ++ + A L L++ ++
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS 535
Query: 220 GFVDGNDFTVGSLVTACTKLGSLHQGK-WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
+ N T +++AC G + GK + GI + ++++ K G +
Sbjct: 536 LPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLE 595
Query: 279 DARKVFDEMLTSDD 292
+A+++ +M D
Sbjct: 596 EAKEMIKKMPVKAD 609
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 295/588 (50%), Gaps = 48/588 (8%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEI 186
F +LK+C++L DVVQ LH V+K+G D F LV Y K V A KV DE+
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
ER + S + ++N + R+F R N TV S++ C G + G
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGM 149
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+H +KSG + ++ TSL++MY +CG+ A ++F+++ +V++ A I G
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKV----PHKSVVTYNAFISGL 205
Query: 307 SQRGHPLKALELFT-DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDN 365
+ G +F R ++ PN G LHGLV+K
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 366 TPVRNALIDMYAKCHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
T V ALIDMY+KC A VF E ++++SWNS ISG +G A+E+F+++
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 425 SESFSP----------------------------------PDAVTVVGVLSACASLGALP 450
SE P P + +LSAC+ + L
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 451 LGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM--GEKNAVTWSAMIS 508
G IH +K I+V T+L++ Y KCG + AR +FD K+ V W+ MIS
Sbjct: 386 NGKEIHGHVIKAA-AERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 509 GYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
GYG G+ +I +F + +E+ EP+ FT+VL+ACSH G V +GS++F +M E +
Sbjct: 445 GYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 569 PSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRR 628
PS +H CM+DLL R+G L+EA + ID+M +P SV+ + L C H + LGE A +
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQM-SEPSSSVYSSLLGSCRQHLDPVLGEEAAMK 563
Query: 629 MLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSL 676
+ EL P+ +V++S++YA+ RW V+ +R++I Q+ L K+PG SL
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 181/364 (49%), Gaps = 13/364 (3%)
Query: 225 NDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVF 284
N FT L+ +C KLG + QG+ +H VVK+G V+ F AT+L++MY+K + DA KV
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXX 344
DEM E + S A + G + G A +F D +G N
Sbjct: 90 DEM----PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI 145
Query: 345 XXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFI 404
GM LH L +K G V +L+ MY++C A +FE K VV++N+FI
Sbjct: 146 EG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 405 SGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL 464
SG ++G +F MR S P+ VT V ++ACASL L G +H +K
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 465 VSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE-KNAVTWSAMISGYGMQGDGVGSIALF 523
VGTAL++ Y+KC KSA +VF + + +N ++W+++ISG + G ++ LF
Sbjct: 263 -QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 524 RDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLAR 583
+ E +P+ + S+++ S G V E + F M + VPS+K C+ LL+
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML-SVVMVPSLK---CLTSLLSA 377
Query: 584 AGNL 587
++
Sbjct: 378 CSDI 381
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 147/320 (45%), Gaps = 43/320 (13%)
Query: 41 CKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAM 96
C +I+ + H + GF + T L+S+Y+ G A R+F+ +P ++ ++ A
Sbjct: 142 CGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 97 LRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
+ N + + V S ++L R + V F + AC+ L ++ +LH V+K
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 157 -PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAE-RNVVSWTSMFVAYVQN---------- 204
+ V L+D YSKC SA VF E+ + RN++SW S+ + N
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 205 ----------DCA---------------VEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
D A +E + F RM + + + SL++AC+ +
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDI 381
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
+L GK +HG+V+K+ + F+ TSL++MY+KCG AR++FD D V W
Sbjct: 382 WTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF--EPKPKDPVFW 439
Query: 300 TAMIVGYSQRGHPLKALELF 319
MI GY + G A+E+F
Sbjct: 440 NVMISGYGKHGECESAIEIF 459
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 6/182 (3%)
Query: 431 PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
P+ T +L +CA LG + G +HA +K G ++ TAL++ Y K A
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFF-VDVFTATALVSMYMKVKQVTDALK 87
Query: 491 VFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGM 550
V D M E+ + +A +SG G + +F D N V SVL C
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI-- 145
Query: 551 VGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYL 610
EG H + + F + +V + +R G A +K+P V + A++
Sbjct: 146 --EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFI 202
Query: 611 HG 612
G
Sbjct: 203 SG 204
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 268/506 (52%), Gaps = 20/506 (3%)
Query: 179 ARKVFDEIAERNVVSWT-SMFVAYVQNDCAVEGLRLFNRMR-EGFVDGNDFTVGSLVTAC 236
ARK+FD+ +R+ + SM AY++ + L+ +R E ++FT +L +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 237 TKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDL 296
+ ++QG +H + + G + +++T +++MY K G +G AR FDEM +
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE---- 144
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDRNWAG--ILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
VSWTA+I GY + G A +LF ++ N + H
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTH 204
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
V+ +I Y + AR +F+ ++++VSWN+ I G Q+
Sbjct: 205 KTVI---------TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTA 474
E + +FQ M++ + PD VT++ VL A + GAL LG H F + L + V TA
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDK-KVKVCTA 314
Query: 475 LLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPN 534
+L+ Y+KCG+ + A+ +FD M EK +W+AMI GY + G+ ++ LF M+ EE +P+
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPD 373
Query: 535 EVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFI 594
E+ +V+ AC+H G+V EG + FH+M RE+ ++HY CMVDLL RAG+LKEA D I
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 595 DKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWG 654
MP +P + ++L CG + + E E +++ +EL P YVL+ NLYA+D RW
Sbjct: 433 TNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWD 492
Query: 655 MVKQVREMIKQRGLNKVPGCSLVEID 680
V+ ++++ K GCSL+EI+
Sbjct: 493 DFGMVKNVMRKNQAKKEVGCSLIEIN 518
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 223/505 (44%), Gaps = 54/505 (10%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSF--KAMLRWYFLNNLHSDVVSFYHLTRYTL 120
TK L + AS + +AR+LFD P + SF +M++ Y + D + Y R
Sbjct: 14 TKFLVISASAVGIGYARKLFDQRPQRD-DSFLSNSMIKAYLETRQYPDSFALYRDLRKET 72
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSA 179
F D F+ + K+CS V Q +LH + + G +D +V G+VD Y+K G + A
Sbjct: 73 CFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCA 132
Query: 180 RKVFDEIAERNVVSWTSMFVAYV---QNDCA---------VEGLRLFNRMREGFVDGNDF 227
R FDE+ R+ VSWT++ Y+ + D A V+ + ++N M +GFV D
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDM 192
Query: 228 TVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
T + H T++++ Y DI ARK+FD M
Sbjct: 193 TSAR-------------------RLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 288 LTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL-PNXXXXXXXXXXXXXXXX 346
E +LVSW MI GY Q P + + LF + L P+
Sbjct: 234 ----PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGA 289
Query: 347 XXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISG 406
+G H V + L V A++DMY+KC + A+ +F+ +K V SWN+ I G
Sbjct: 290 LSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHG 349
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
A +G+A AL++F M E PD +T++ V++AC G + G + GL +
Sbjct: 350 YALNGNARAALDLFVTMMIE--EKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNA 407
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGDGVGSIALFRD 525
+ G +++ + G K A + M E N + S+ +S G D I
Sbjct: 408 KIEHYG-CMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKD----IERAER 462
Query: 526 MLKE--ECEP----NEVVFTSVLAA 544
+LK+ E EP N V+ ++ AA
Sbjct: 463 ILKKAVELEPQNDGNYVLLRNLYAA 487
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 138/276 (50%), Gaps = 16/276 (5%)
Query: 49 KFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
+ H+ + GF D T ++ +YA FG + AR FD +P + S+ A++ Y
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 105 LHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLN 164
+ + D+V+++ ++ + D+ A RL +
Sbjct: 159 ELDLASKLFD----QMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV---ITWT 211
Query: 165 GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF-VD 223
++ Y + +ARK+FD + ERN+VSW +M Y QN EG+RLF M+ +D
Sbjct: 212 TMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLD 271
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
+D T+ S++ A + G+L G+W H +V + + + T++L+MY KCG+I A+++
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRI 331
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF 319
FDEM E + SW AMI GY+ G+ AL+LF
Sbjct: 332 FDEM----PEKQVASWNAMIHGYALNGNARAALDLF 363
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 184/424 (43%), Gaps = 24/424 (5%)
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
+++ I N + T L + IG ARK+FD+ DD +MI Y +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSF---LSNSMIKAYLETRQ 57
Query: 312 PLKALELFTD-RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRN 370
+ L+ D R P+ G+ LH + + G + V
Sbjct: 58 YPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVST 117
Query: 371 ALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSP 430
++DMYAK + AR F+ + VSW + ISG + G A ++F +M
Sbjct: 118 GVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM------- 170
Query: 431 PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
P VV + +A G + G A L D + ++ T +++ Y D +AR
Sbjct: 171 PHVKDVV-IYNAMMD-GFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARK 228
Query: 491 VFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDM-LKEECEPNEVVFTSVLAACSHSG 549
+FD M E+N V+W+ MI GY I LF++M +P++V SVL A S +G
Sbjct: 229 LFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTG 288
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAY 609
+ G H + +K ++D+ ++ G +++A D+MP + V+ + A
Sbjct: 289 ALSLGE-WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAM 346
Query: 610 LHGCGLHSEFELG-EVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVRE---MIKQ 665
+HG L+ ++ + M+E PD+ +++ + G+V++ R+ ++++
Sbjct: 347 IHGYALNGNARAALDLFVTMMIEEKPDEITMLAVIT----ACNHGGLVEEGRKWFHVMRE 402
Query: 666 RGLN 669
GLN
Sbjct: 403 MGLN 406
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 202/670 (30%), Positives = 332/670 (49%), Gaps = 56/670 (8%)
Query: 50 FHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYF-LNNLH-- 106
+ L+ H +T LLSLY G L ++ FD + P+++S+ +L F L ++
Sbjct: 84 IRSGLLCHSHVSNT-LLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYA 142
Query: 107 ----------SDVV-----------SFYHLTR-------YTLGFFHDLVVFSIVLKACSE 138
DV S YH T + LG HD F+ +L C +
Sbjct: 143 FEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-D 201
Query: 139 LRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDE--IAERNVVSWT 195
+ ++H VIK+G V+N L+ Y C V A VF+E +A R+ V++
Sbjct: 202 YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFN 261
Query: 196 SMF--VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVV 253
+ +A + D E L +F +M E + D T S++ +C+ HQ VHG +
Sbjct: 262 VVIDGLAGFKRD---ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQ---VHGLAI 315
Query: 254 KSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPL 313
K+G + ++ + + MY D G A KVF+ + +E DLV+W MI Y+Q
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESL----EEKDLVTWNTMISSYNQAKLGK 371
Query: 314 KALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALI 373
A+ ++ + G+ P+ M + ++K GL + NALI
Sbjct: 372 SAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALI 428
Query: 374 DMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ-RMRSESFSPPD 432
Y+K + A +FE +++K+++SWN+ ISG +G +E LE F + SE PD
Sbjct: 429 SAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPD 488
Query: 433 AVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVF 492
A T+ +LS C S +L LGS HA+ L+ G ++ +G AL+N Y++CG +++ VF
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL-IGNALINMYSQCGTIQNSLEVF 547
Query: 493 DGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE-ECEPNEVVFTSVLAACSHSGMV 551
+ M EK+ V+W+++IS Y G+G ++ ++ M E + P+ F++VL+ACSH+G+V
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 552 GEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA--LDFIDKMPVQPGVSVFGAY 609
EG +F+ M + ++ H++C+VDLL RAG+L EA L I + + V V+ A
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWAL 667
Query: 610 LHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLN 669
C H + +LG++ + ++E D YV +SN+YA G W ++ R I G
Sbjct: 668 FSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAM 727
Query: 670 KVPGCSLVEI 679
K GCS + +
Sbjct: 728 KQRGCSWMRL 737
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/558 (25%), Positives = 252/558 (45%), Gaps = 52/558 (9%)
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVF 183
D S+ + LRD + ++HC+ I+SG V N L+ Y + G++ S +K F
Sbjct: 56 DQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKF 115
Query: 184 DEIAERNVVSWTSMFVAYVQ-----------------NDCAV---------------EGL 211
DEI E +V SWT++ A + +D A+ +
Sbjct: 116 DEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSV 175
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
LF M + V + F ++++ C GSL GK VH V+K+G + S + +L+ MY
Sbjct: 176 ELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMY 234
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
C + DA VF+E T D V++ +I G + ++L +F A + P
Sbjct: 235 FNCQVVVDACLVFEE--TDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPT- 290
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFET 391
MG +HGL +K G T V NA + MY+ A VFE+
Sbjct: 291 --DLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 392 TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPL 451
+KD+V+WN+ IS Q+ A+ +++RM PD T +L+ L L +
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV-KPDEFTFGSLLATSLDLDVLEM 407
Query: 452 GSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYG 511
+ A +K GL S I + AL++ Y+K G + A ++F+ KN ++W+A+ISG+
Sbjct: 408 ---VQACIIKFGL-SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFY 463
Query: 512 MQGDGVGSIALFRDMLKEECE--PNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVP 569
G + F +L+ E P+ +++L+ C + + GS+ + R F
Sbjct: 464 HNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKE 523
Query: 570 SMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRM 629
++ A ++++ ++ G ++ +L+ ++M + VS + + + H E E + M
Sbjct: 524 TLIGNA-LINMYSQCGTIQNSLEVFNQMSEKDVVS-WNSLISAYSRHGEGENAVNTYKTM 581
Query: 630 LE---LHPDQACYYVLVS 644
+ + PD A + ++S
Sbjct: 582 QDEGKVIPDAATFSAVLS 599
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
+++ N ++G +SG AL++F + + PD +V ++ L G +H
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDG 516
+A++ GL+ C +V LL+ Y + G+ S + FD + E + +W+ ++S GD
Sbjct: 81 CYAIRSGLL-CHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
+ +F M + + + ++ +++ C SG LF M
Sbjct: 140 EYAFEVFDKMPERD---DVAIWNAMITGCKESGYHETSVELFREM 181
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/678 (28%), Positives = 325/678 (47%), Gaps = 91/678 (13%)
Query: 50 FHASLIVHGFPG-DTKLLSLYASFGF------LRHARRLFDHLPSPNLHSFKAMLRWYFL 102
H LI G DT+++S AS GF L A +LFD +P + ++ ++
Sbjct: 9 IHGGLIKRGLDNSDTRVVS--ASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLR 66
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGF 161
+ V + +++ +D + + L+ CS + ++H +V++ G S+
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKL-LQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERN------------------------------- 190
+ N L+ YS+ G + +RKVF+ + +RN
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 191 ----VVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
+V+W S+ Y + + + + RM+ + + ++ SL+ A + G L GK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+HGY++++ + + ++ T+L++MY+K G + AR VFD M D ++V+W +++ G
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM----DAKNIVAWNSLVSGL 301
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
S A L GI P+
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITW-------------------------------- 329
Query: 367 PVRNALIDMYAKCHLVSDARYVF----ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
N+L YA A V E V +VVSW + SGC+++G+ AL++F +
Sbjct: 330 ---NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKC 482
M+ E P +A T+ +L L L G +H F L+ L+ C YV TAL++ Y K
Sbjct: 387 MQEEGVGP-NAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI-CDAYVATALVDMYGKS 444
Query: 483 GDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVL 542
GD +SA +F G+ K+ +W+ M+ GY M G G IA F ML+ EP+ + FTSVL
Sbjct: 445 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Query: 543 AACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPG 602
+ C +SG+V EG + F +M +P+++H +CMVDLL R+G L EA DFI M ++P
Sbjct: 505 SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPD 564
Query: 603 VSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREM 662
+++GA+L C +H + EL E+A +R+ L P + Y+++ NLY++ RW V+++R +
Sbjct: 565 ATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNL 624
Query: 663 IKQRGLNKVPGCSLVEID 680
++ + S ++ID
Sbjct: 625 MRNNRVRVQDLWSWIQID 642
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 19/210 (9%)
Query: 451 LGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGY 510
LG +IH +K GL + V +A + FY +C A +FD M +++ + W+ ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 511 GMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPS 570
G+ ++ LFR+M + + +L CS+ EG R H L +
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG-RQIHGYVLRLGLESN 123
Query: 571 MKHYACMVDLLARAGNLKEALDFIDKMP---VQPGVSVFGAYLH------GCGLHSEFEL 621
+ ++ + +R G L+ + + M + S+ +Y GL E E+
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 622 GEVAIRRMLELHPDQACYYVLVSNLYASDG 651
L PD + L+S YAS G
Sbjct: 184 --------CGLKPDIVTWNSLLSG-YASKG 204
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/621 (30%), Positives = 301/621 (48%), Gaps = 17/621 (2%)
Query: 75 LRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLK 134
L AR+LFD +P N+ SF +++ Y + + + R D ++ L
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREA-NLKLDKFTYAGALG 156
Query: 135 ACSELRDVVQAARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVS 193
C E D+ LH V+ +G S F++N L+D YSKCG + A +FD ER+ VS
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 194 WTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACT---KLGSLHQGKWVHG 250
W S+ YV+ A E L L +M ++ + +GS++ AC G + +G +H
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRG 310
Y K G+ + + T+LL+MY K G + +A K+F M + + +V++ AMI G+ Q
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN----VVTYNAMISGFLQMD 332
Query: 311 H-----PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDN 365
+A +LF D G+ P+ G +H L+ K +
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 366 TPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
+ +ALI++YA D F +T ++D+ SW S I Q+ A ++F+++ S
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS 452
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
S P+ TV ++SACA AL G I +A+K G + V T+ ++ YAK G+
Sbjct: 453 -SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG-IDAFTSVKTSSISMYAKSGNM 510
Query: 486 KSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAAC 545
A VF + + T+SAMIS G ++ +F M +PN+ F VL AC
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 546 SHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSV 605
H G+V +G + F M + P+ KH+ C+VDLL R G L +A + I Q
Sbjct: 571 CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVT 630
Query: 606 FGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQ 665
+ A L C ++ + +G+ R++EL P+ + YVL+ N+Y G ++VRE+++
Sbjct: 631 WRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRD 690
Query: 666 RGLNKVPGCSLVEIDLNDTYS 686
RG+ K P S + I N T+S
Sbjct: 691 RGVKKEPALSWIVIG-NQTHS 710
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 158/630 (25%), Positives = 261/630 (41%), Gaps = 69/630 (10%)
Query: 101 FLNNLHSDVVSFYHLTRYTLGFFH------------DLVVFSIVLKACSELRDVVQAARL 148
F NN+ D + R LG+ D + I+ + ++ VV
Sbjct: 10 FFNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLA 69
Query: 149 HCHVIKSGPSDGFVLNGLVDA-YSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCA 207
H H+IKS + L + Y KC + AR++FD + ERN++S+ S+ Y Q
Sbjct: 70 HGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFY 129
Query: 208 VEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSL 267
+ + LF RE + + FT + C + L G+ +HG VV +G+ FL L
Sbjct: 130 EQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVL 189
Query: 268 LNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGI 327
++MY KCG + A +FD DE D VSW ++I GY + G + L L + G+
Sbjct: 190 IDMYSKCGKLDQAMSLFDRC----DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 328 LPNXXXXXXXXXX---XXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
GM +H K G+ + VR AL+DMYAK + +
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 385 ARYVFETTVQKDVVSWNSFISGCAQ-----SGSAYEALEMFQRMRSESFSP-PDAVTVVG 438
A +F K+VV++N+ ISG Q ++ EA ++F M+ P P +V
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV-- 363
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK 498
VL AC++ L G IHA K+ S ++G+AL+ YA G + F ++
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQS-DEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 499 NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRL- 557
+ +W++MI + + LFR + P E + +++AC+ + G ++
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQ 482
Query: 558 ------------------FHMMCRELN-------FV----PSMKHYACMVDLLARAGNLK 588
M + N F+ P + Y+ M+ LA+ G+
Sbjct: 483 GYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSAN 542
Query: 589 EALDFIDKMP---VQPGVSVFGAYLHGC---GLHSEFELGEVAIRRMLELHPDQACYYVL 642
EAL+ + M ++P F L C GL ++ ++ ++P++ + L
Sbjct: 543 EALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCL 602
Query: 643 VSNLYASDGRWGMVKQVREMIKQRGLNKVP 672
V L GR G + +I G P
Sbjct: 603 VDLL----GRTGRLSDAENLILSSGFQDHP 628
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 174/368 (47%), Gaps = 43/368 (11%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS------FYHLT 116
T LL +YA G L+ A +LF +PS N+ ++ AM+ + + +D S F +
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGH 175
R G FS+VLKACS + + ++H + K+ SD F+ + L++ Y+ G
Sbjct: 351 RR--GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA 235
+ F +++++ SWTSM +VQN+ LF ++ + ++TV +++A
Sbjct: 409 TEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSA 468
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
C +L G+ + GY +KSGI + + TS ++MY K G++ A +VF E+ D
Sbjct: 469 CADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNP----D 524
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLL-- 353
+ +++AMI +Q G +AL +F GI PN +G+L+
Sbjct: 525 VATYSAMISSLAQHGSANEALNIFESMKTHGIKPN--------------QQAFLGVLIAC 570
Query: 354 -HGLVVKCGLFDNTPVRN------------ALIDMYAKCHLVSDAR-YVFETTVQKDVVS 399
HG +V GL ++N L+D+ + +SDA + + Q V+
Sbjct: 571 CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVT 630
Query: 400 WNSFISGC 407
W + +S C
Sbjct: 631 WRALLSSC 638
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 252/471 (53%), Gaps = 16/471 (3%)
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
+ MR V + T L+ A KL + ++ H ++VK G+ + F+ SL++ Y
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
G A ++FD ++ D+V+WTAMI G+ + G +A+ F + G+ N
Sbjct: 151 SGLFDFASRLFD----GAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLV-----VKCGLFDNTPVRNALIDMYAKCHLVSDARYV 388
G +HGL VKC +F + ++L+DMY KC DA+ V
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF----IGSSLVDMYGKCSCYDDAQKV 262
Query: 389 FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA 448
F+ ++VV+W + I+G QS + + +F+ M +P + T+ VLSACA +GA
Sbjct: 263 FDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEK-TLSSVLSACAHVGA 321
Query: 449 LPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMIS 508
L G +H + +K+ + + GT L++ Y KCG + A +VF+ + EKN TW+AMI+
Sbjct: 322 LHRGRRVHCYMIKNS-IEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 509 GYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
G+ G + LF ML PNEV F +VL+AC+H G+V EG RLF M N
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 569 PSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRR 628
P HYACMVDL R G L+EA I++MP++P V+GA C LH ++ELG+ A R
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASR 500
Query: 629 MLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
+++L P + Y L++NLY+ W V +VR+ +K + + K PG S +E+
Sbjct: 501 VIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 193/369 (52%), Gaps = 17/369 (4%)
Query: 49 KFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
+FHA ++ G D L+S Y+S G A RLFD ++ ++ AM+ + N
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 105 LHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG--PSDGFV 162
S+ + ++ + T +++ V S VLKA ++ DV +H +++G D F+
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVS-VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
+ LVD Y KC A+KVFDE+ RNVV+WT++ YVQ+ C +G+ +F M + V
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
N+ T+ S+++AC +G+LH+G+ VH Y++K+ I +N+ T+L+++YVKCG + +A
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
VF+ + E ++ +WTAMI G++ G+ A +LF + + PN
Sbjct: 363 VFERL----HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRN---ALIDMYAKCHLVSDARYVFETT-VQKDVV 398
G L L +K G F+ P + ++D++ + L+ +A+ + E ++ V
Sbjct: 419 HGGLVEEGRRLF-LSMK-GRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
Query: 399 SWNSFISGC 407
W + C
Sbjct: 477 VWGALFGSC 485
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 177/571 (30%), Positives = 292/571 (51%), Gaps = 18/571 (3%)
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARKVF 183
D V F ++L ++ + ++HC +K G V N L++ Y K AR VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS-L 242
D ++ER+++SW S+ QN VE + LF ++ + + +T+ S++ A + L L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
K VH + +K +SF++T+L++ Y + + +A E+L DLV+W AM
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-----EILFERHNFDLVAWNAM 488
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
+ GY+Q K L+LF + G + G +H +K G
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 363 FDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
+ V + ++DMY KC +S A++ F++ D V+W + ISGC ++G A +F +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS--IYVGTALLNFYA 480
MR PD T+ + A + L AL G IHA ALK ++C+ +VGT+L++ YA
Sbjct: 609 MRLMGV-LPDEFTIATLAKASSCLTALEQGRQIHANALK---LNCTNDPFVGTSLVDMYA 664
Query: 481 KCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
KCG A +F + N W+AM+ G G+G ++ LF+ M +P++V F
Sbjct: 665 KCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIG 724
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ 600
VL+ACSHSG+V E + M + P ++HY+C+ D L RAG +K+A + I+ M ++
Sbjct: 725 VLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME 784
Query: 601 PGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVR 660
S++ L C + + E G+ ++LEL P + YVL+SN+YA+ +W +K R
Sbjct: 785 ASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLAR 844
Query: 661 EMIKQRGLNKVPGCSLVEIDLNDTYSKVTIF 691
M+K + K PG S +E+ +K+ IF
Sbjct: 845 TMMKGHKVKKDPGFSWIEVK-----NKIHIF 870
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 166/659 (25%), Positives = 280/659 (42%), Gaps = 90/659 (13%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWY------FLNNLHSDVVSFYHLTRY 118
L+S+Y+ G L +ARR+FD +P +L S+ ++L Y + N+ + F L +
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 119 TLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVC 177
+ + + S +LK C V + H + K G D FV LV+ Y K G V
Sbjct: 140 VV--YTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 178 SARKVFDEIAERNVVSWTSMFVAYVQNDCAVEG------------------LRLFNRMR- 218
+ +F+E+ R+VV W M AY++ E LRL R+
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Query: 219 --------EGFVDGNDFTVGSLVTACTKLGS--LHQGKW--------------------- 247
+ F +GND + S + K S LH G++
Sbjct: 258 DDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVT 317
Query: 248 -------------------VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEML 288
VH +K G+ + ++ SL+NMY K G AR VFD M
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM- 376
Query: 289 TSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXX-XXX 347
E DL+SW ++I G +Q G ++A+ LF G+ P+
Sbjct: 377 ---SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 348 XMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGC 407
+ +H +K ++ V ALID Y++ + +A +FE D+V+WN+ ++G
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGY 492
Query: 408 AQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSC 467
QS ++ L++F M + D T+ V C L A+ G +HA+A+K G
Sbjct: 493 TQSHDGHKTLKLFALMHKQG-ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG-YDL 550
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML 527
++V + +L+ Y KCGD +A+ FD + + V W+ MISG G+ + +F M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 528 KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
P+E ++ A S + +G R H +LN +VD+ A+ G++
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQG-RQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 588 KEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRM--LELHPDQACYYVLVS 644
+A ++ + ++ + A L G H E + ++M L + PD+ + ++S
Sbjct: 670 DDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 215/440 (48%), Gaps = 49/440 (11%)
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQ-NDCAVEGLR----L 213
+ F++N L+ YSKCG + AR+VFD++ +R++VSW S+ AY Q ++C VE ++ L
Sbjct: 73 ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
F +R+ V + T+ ++ C G + + HGY K G+ + F+A +L+N+Y+K
Sbjct: 133 FRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLK 192
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
G + + + +F+EM D+V W M+ Y + G +A++L + + +G+ PN
Sbjct: 193 FGKVKEGKVLFEEMPYR----DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE-- 246
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV 393
+ L L G D++ + +A + DA V E
Sbjct: 247 -----------------ITLRLLARISG--DDSDA--GQVKSFANGN---DASSVSE--- 279
Query: 394 QKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGS 453
++ N +S SG L+ F M ES D VT + +L+ + +L LG
Sbjct: 280 ---IIFRNKGLSEYLHSGQYSALLKCFADM-VESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 454 SIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQ 513
+H ALK GL + V +L+N Y K AR VFD M E++ ++W+++I+G
Sbjct: 336 QVHCMALKLGL-DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 514 GDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG---SRLFHMMCRELNFVPS 570
G V ++ LF +L+ +P++ TSVL A S + EG S+ H+ ++N V
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSD 451
Query: 571 MKHYACMVDLLARAGNLKEA 590
++D +R +KEA
Sbjct: 452 SFVSTALIDAYSRNRCMKEA 471
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 10/184 (5%)
Query: 363 FDNTPVR---NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG-----SAY 414
F+ P R N LI MY+KC ++ AR VF+ +D+VSWNS ++ AQS +
Sbjct: 68 FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQ 127
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTA 474
+A +F+ +R + +T+ +L C G + S H +A K GL +V A
Sbjct: 128 QAFLLFRILRQDVVYTS-RMTLSPMLKLCLHSGYVWASESFHGYACKIGL-DGDEFVAGA 185
Query: 475 LLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPN 534
L+N Y K G K +++F+ M ++ V W+ M+ Y G +I L PN
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 535 EVVF 538
E+
Sbjct: 246 EITL 249
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 11/234 (4%)
Query: 44 IDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRW 99
I+ K+ HA I G+ D + +L +Y G + A+ FD +P P+ ++ M+
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 100 YFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK-SGPS 158
N + R +G D + + KA S L + Q ++H + +K + +
Sbjct: 593 CIENGEEERAFHVFSQMRL-MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
D FV LVD Y+KCG + A +F I N+ +W +M V Q+ E L+LF +M+
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQG----KWVHG-YVVKSGIHVNSFLATSL 267
+ + T +++AC+ G + + + +HG Y +K I S LA +L
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL 765
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 9/193 (4%)
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
GK H ++ + FL +L++MY KCG + AR+VFD+M + DLVSW +++
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM----PDRDLVSWNSILA 113
Query: 305 GYSQRGHPL-----KALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
Y+Q + +A LF + + HG K
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
GL + V AL+++Y K V + + +FE +DVV WN + + G EA+++
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 420 FQRMRSESFSPPD 432
S +P +
Sbjct: 234 SSAFHSSGLNPNE 246
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 183/630 (29%), Positives = 302/630 (47%), Gaps = 93/630 (14%)
Query: 66 LSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHD 125
+S + G + AR+ FD L + S+ +++ YF N L + +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFD----------- 72
Query: 126 LVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDE 185
SE R+VV NGLV Y K + AR VF+
Sbjct: 73 ---------EMSE-RNVVS------------------WNGLVSGYIKNRMIVEARNVFEL 104
Query: 186 IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG 245
+ ERNVVSWT+M Y+Q E LF RM E N+ + + G + +
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKA 160
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
+ ++ + + +T+++ + G + +AR +FDEM E ++V+WT MI G
Sbjct: 161 RKLYDMMPVKDV----VASTNMIGGLCREGRVDEARLIFDEM----RERNVVTWTTMITG 212
Query: 306 YSQRGHPLKALELF------TDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
Y Q A +LF T+ +W +L +G L G +
Sbjct: 213 YRQNNRVDVARKLFEVMPEKTEVSWTSML--------------------LGYTLSGRIED 252
Query: 360 CG-LFDNTPVR-----NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSA 413
F+ P++ NA+I + + +S AR VF+ +D +W I + G
Sbjct: 253 AEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 414 YEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS----I 469
EAL++F +M+ + P +++ +LS CA+L +L G +HA LV C +
Sbjct: 313 LEALDLFAQMQKQGVRPSFP-SLISILSVCATLASLQYGRQVHAH-----LVRCQFDDDV 366
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE 529
YV + L+ Y KCG+ A++VFD K+ + W+++ISGY G G ++ +F +M
Sbjct: 367 YVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSS 426
Query: 530 ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKE 589
PN+V ++L ACS++G + EG +F M + P+++HY+C VD+L RAG + +
Sbjct: 427 GTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDK 486
Query: 590 ALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYAS 649
A++ I+ M ++P +V+GA L C HS +L EVA +++ E PD A YVL+S++ AS
Sbjct: 487 AMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINAS 546
Query: 650 DGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
+WG V VR+ ++ ++K PGCS +E+
Sbjct: 547 RSKWGDVAVVRKNMRTNNVSKFPGCSWIEV 576
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 219/501 (43%), Gaps = 50/501 (9%)
Query: 37 LSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAM 96
LS I K I+ +KF SL ++S Y S G + AR+LFD + N+ S+ +
Sbjct: 27 LSRIGK-INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGL 85
Query: 97 LRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
+ Y N + + + + L ++V ++ ++K + V +A L + +
Sbjct: 86 VSGYIKNRMIVEARNVFELMPE-----RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN 140
Query: 157 PSD------GFVLNGLVDAYSKC----------------------GHVCSARKVFDEIAE 188
G + +G +D K G V AR +FDE+ E
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRE 200
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG-KW 247
RNVV+WT+M Y QN+ +LF M E + + S++ T G + ++
Sbjct: 201 RNVVTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
+K I N+ + + + G+I AR+VFD M ++ D +W MI Y
Sbjct: 257 FEVMPMKPVIACNAMIVG-----FGEVGEISKARRVFDLM----EDRDNATWRGMIKAYE 307
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
++G L+AL+LF G+ P+ G +H +V+C D+
Sbjct: 308 RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVY 367
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES 427
V + L+ MY KC + A+ VF+ KD++ WNS ISG A G EAL++F M S S
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS-S 426
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKS 487
+ P+ VT++ +L+AC+ G L G I V+ ++ + ++ + G
Sbjct: 427 GTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDK 486
Query: 488 ARMVFDGMGEK-NAVTWSAMI 507
A + + M K +A W A++
Sbjct: 487 AMELIESMTIKPDATVWGALL 507
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 271/545 (49%), Gaps = 20/545 (3%)
Query: 148 LHCHVIKS----GPSDG-------FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTS 196
LH +IK+ P D V N L+ Y+KCG + A K+FDE+ R+V+S
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 197 MFVAYVQNDCAVEGLRLFNRMR-EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS 255
+F +++N G L RM G D T+ +++ C K +H + S
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSGGFDHATLTI--VLSVCDTPEFCLVTKMIHALAILS 184
Query: 256 GIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKA 315
G + L+ Y KCG R VFD M ++++ TA+I G +
Sbjct: 185 GYDKEISVGNKLITSYFKCGCSVSGRGVFDGM----SHRNVITLTAVISGLIENELHEDG 240
Query: 316 LELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDM 375
L LF+ + PN G +H L+ K G+ + +AL+DM
Sbjct: 241 LRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDM 300
Query: 376 YAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVT 435
Y+KC + DA +FE+T + D VS + G AQ+GS EA++ F RM DA
Sbjct: 301 YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI-DANV 359
Query: 436 VVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM 495
V VL +L LG +H+ +K S + +V L+N Y+KCGD ++ VF M
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKF-SGNTFVNNGLINMYSKCGDLTDSQTVFRRM 418
Query: 496 GEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGS 555
++N V+W++MI+ + G G+ ++ L+ +M E +P +V F S+L ACSH G++ +G
Sbjct: 419 PKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGR 478
Query: 556 RLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGL 615
L + M P +HY C++D+L RAG LKEA FID +P++P ++ A L C
Sbjct: 479 ELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSF 538
Query: 616 HSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCS 675
H + E+GE A ++ + PD + ++L++N+Y+S G+W + + +K G+ K G S
Sbjct: 539 HGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Query: 676 LVEID 680
+EI+
Sbjct: 599 SIEIE 603
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 237/496 (47%), Gaps = 25/496 (5%)
Query: 30 PH-PPTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSP 88
PH P L+ S I KN + + A + + LLSLYA G L A +LFD +P
Sbjct: 61 PHLGPCLHAS-IIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMR 119
Query: 89 NLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARL 148
++ S + ++ + FL N ++ F L R D +IVL C + +
Sbjct: 120 DVIS-QNIVFYGFLRNRETE-SGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMI 177
Query: 149 HCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCA 207
H I SG V N L+ +Y KCG S R VFD ++ RNV++ T++ ++N+
Sbjct: 178 HALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELH 237
Query: 208 VEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSL 267
+GLRLF+ MR G V N T S + AC+ + +G+ +H + K GI + ++L
Sbjct: 238 EDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESAL 297
Query: 268 LNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGI 327
++MY KCG I DA +F+ S E+D VS T ++VG +Q G +A++ F AG+
Sbjct: 298 MDMYSKCGSIEDAWTIFE----STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGV 353
Query: 328 LPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARY 387
+ +G LH LV+K NT V N LI+MY+KC ++D++
Sbjct: 354 EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQT 413
Query: 388 VFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLG 447
VF +++ VSWNS I+ A+ G AL++++ M + P D VT + +L AC+ +G
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTD-VTFLSLLHACSHVG 472
Query: 448 ALPLG-------SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK-N 499
+ G +H + +C +++ + G K A+ D + K +
Sbjct: 473 LIDKGRELLNEMKEVHGIEPRTEHYTC-------IIDMLGRAGLLKEAKSFIDSLPLKPD 525
Query: 500 AVTWSAMISGYGMQGD 515
W A++ GD
Sbjct: 526 CKIWQALLGACSFHGD 541
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 13/276 (4%)
Query: 29 LPHPPTL-YLSPIC-----KNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHA 78
L HP ++ YLS + + I ++ HA L +G + + L+ +Y+ G + A
Sbjct: 251 LVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDA 310
Query: 79 RRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSE 138
+F+ + S +L N + + F+ + G D V S VL
Sbjct: 311 WTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF-IRMLQAGVEIDANVVSAVLGVSFI 369
Query: 139 LRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSM 197
+ +LH VIK S + FV NGL++ YSKCG + ++ VF + +RN VSW SM
Sbjct: 370 DNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSM 429
Query: 198 FVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK-SG 256
A+ ++ + L+L+ M V D T SL+ AC+ +G + +G+ + + + G
Sbjct: 430 IAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHG 489
Query: 257 IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD 292
I + T +++M + G + +A+ D + D
Sbjct: 490 IEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPD 525
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 284/546 (52%), Gaps = 63/546 (11%)
Query: 175 HVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVT 234
HVCS F E+ + + W ++ ++ + L L M E V + F++ ++
Sbjct: 74 HVCSFS--FGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLK 129
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM------- 287
AC++LG + G +HG++ K+G+ + FL L+ +Y+KCG +G +R++FD M
Sbjct: 130 ACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVS 189
Query: 288 -------------LTSDDEL---------DLVSWTAMIVGYSQRGHPLK-ALELFTDRNW 324
+ S EL +L+SW +MI GY+Q + A +LF D
Sbjct: 190 YNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD--- 246
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC-GLFDNTPVRN-----ALIDMYAK 378
+P G + HG + GLFD P R+ +ID YAK
Sbjct: 247 ---MPEKDLISWNSMID--------GYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAK 295
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
V A+ +F+ +DVV++NS ++G Q+ EALE+F M ES PD T+V
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVG----TALLNFYAKCGDAKSARMVFDG 494
VL A A LG L +H + +V Y+G AL++ Y+KCG + A +VF+G
Sbjct: 356 VLPAIAQLGRLSKAIDMHLY-----IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEG 410
Query: 495 MGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
+ K+ W+AMI G + G G + + + + +P+++ F VL ACSHSG+V EG
Sbjct: 411 IENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 555 SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCG 614
F +M R+ P ++HY CMVD+L+R+G+++ A + I++MPV+P ++ +L C
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACS 530
Query: 615 LHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGC 674
H EFE GE+ + ++ YVL+SN+YAS G W V++VR M+K+R + K+PGC
Sbjct: 531 HHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGC 590
Query: 675 SLVEID 680
S +E+D
Sbjct: 591 SWIELD 596
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 216/501 (43%), Gaps = 85/501 (16%)
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVF 183
D S+VLKACS L V ++H + K+G SD F+ N L+ Y KCG + +R++F
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLF-------------NRMREGFVDGND---- 226
D + +R+ VS+ SM YV+ V LF N M G+ +D
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 227 -------------FTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
+ S++ K G + K + + + + ++++ Y K
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV----VTWATMIDGYAK 295
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD-RNWAGILPNXX 332
G + A+ +FD+M D+V++ +M+ GY Q + ++ALE+F+D + +LP+
Sbjct: 296 LGFVHHAKTLFDQM----PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT 351
Query: 333 XXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETT 392
+ +H +V+ + + ALIDMY+KC + A VFE
Sbjct: 352 TLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI 411
Query: 393 VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
K + WN+ I G A G A +M ++ S P D +T VGVL+AC+
Sbjct: 412 ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDD-ITFVGVLNACS-------- 462
Query: 453 SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGM 512
H+ +K+GL + F+ M K+ + + YG
Sbjct: 463 ---HSGLVKEGL-------------------------LCFELMRRKHKI--EPRLQHYGC 492
Query: 513 QGDGV---GSIALFRDMLKE-ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
D + GSI L +++++E EPN+V++ + L ACSH G + + + +
Sbjct: 493 MVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYN 552
Query: 569 PSMKHYACMVDLLARAGNLKE 589
PS Y + ++ A G K+
Sbjct: 553 PS--SYVLLSNMYASFGMWKD 571
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 172/396 (43%), Gaps = 49/396 (12%)
Query: 56 VHGFPGDTKLLS----------LYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNL 105
+HGF T L S LY G L +R++FD +P + S+ +M+ Y L
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 106 HSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQ-AARLHCHVIK------SGPS 158
+VS L +L+ ++ ++ ++ D V A++L + + +
Sbjct: 203 ---IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMI 259
Query: 159 DGFVLNG----------------------LVDAYSKCGHVCSARKVFDEIAERNVVSWTS 196
DG+V +G ++D Y+K G V A+ +FD++ R+VV++ S
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319
Query: 197 MFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS 255
M YVQN +E L +F+ M +E + +D T+ ++ A +LG L + +H Y+V+
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 256 GIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKA 315
++ L +L++MY KCG I A VF+ + + + W AMI G + G A
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI----ENKSIDHWNAMIGGLAIHGLGESA 435
Query: 316 LELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLV-VKCGLFDNTPVRNALID 374
++ + P+ G+L L+ K + ++D
Sbjct: 436 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 495
Query: 375 MYAKCHLVSDARYVFETT-VQKDVVSWNSFISGCAQ 409
+ ++ + A+ + E V+ + V W +F++ C+
Sbjct: 496 ILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSH 531
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/623 (29%), Positives = 301/623 (48%), Gaps = 15/623 (2%)
Query: 62 DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLG 121
+ L+S+ S G + +A +FD + + S+ ++ Y N + + L R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR--- 237
Query: 122 FFHDLV---VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVC 177
FHD V S +L + +H V+K G S V N L+ Y+ G
Sbjct: 238 -FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 178 SARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACT 237
A VF ++ ++++SW S+ ++V + +++ L L M N T S + AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 238 KLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
+G+ +HG VV SG+ N + +L++MY K G++ ++R+V +M D+V
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM----PRRDVV 412
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX-XXXXXXXXMGMLLHGL 356
+W A+I GY++ P KAL F G+ N G LH
Sbjct: 413 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 472
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
+V G + V+N+LI MYAKC +S ++ +F +++++WN+ ++ A G E
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 532
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
L++ +MRS S D + LSA A L L G +H A+K G S ++ A
Sbjct: 533 LKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS-FIFNAAA 590
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
+ Y+KCG+ + ++ +W+ +IS G G A F +ML+ +P V
Sbjct: 591 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHV 650
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
F S+L ACSH G+V +G + M+ R+ P+++H C++DLL R+G L EA FI K
Sbjct: 651 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 710
Query: 597 MPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMV 656
MP++P V+ + L C +H + G A + +L P+ YVL SN++A+ GRW V
Sbjct: 711 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDV 770
Query: 657 KQVREMIKQRGLNKVPGCSLVEI 679
+ VR+ + + + K CS V++
Sbjct: 771 ENVRKQMGFKNIKKKQACSWVKL 793
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/595 (29%), Positives = 280/595 (47%), Gaps = 21/595 (3%)
Query: 50 FHASLIVHGFPGDTKLLS----------LYASFGFLRHARRLFDHLPSPNLHSFKAMLRW 99
F + VHGF + LLS LY +G + +R++F+ +P N+ S+ +++
Sbjct: 58 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 100 YFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PS 158
Y +V+ Y R G + S+V+ +C L+D ++ V+KSG S
Sbjct: 118 YSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
V N L+ G+V A +FD+++ER+ +SW S+ AY QN E R+F+ MR
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
+ N TV +L++ + G+ +HG VVK G + +LL MY G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXX 338
+A VF +M T DL+SW +++ + G L AL L +G N
Sbjct: 297 EANLVFKQMPTK----DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352
Query: 339 XXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVV 398
G +LHGLVV GLF N + NAL+ MY K +S++R V ++DVV
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412
Query: 399 SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA-LPLGSSIHA 457
+WN+ I G A+ +AL FQ MR E S + +TVV VLSAC G L G +HA
Sbjct: 413 AWNALIGGYAEDEDPDKALAAFQTMRVEGVS-SNYITVVSVLSACLLPGDLLERGKPLHA 471
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
+ + G S +V +L+ YAKCGD S++ +F+G+ +N +TW+AM++ G G
Sbjct: 472 YIVSAGFESDE-HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGE 530
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM 577
+ L M ++ F+ L+A + ++ EG +L H + +L F +
Sbjct: 531 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAA 589
Query: 578 VDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLEL 632
D+ ++ G + E + + V + + + G H FE MLE+
Sbjct: 590 ADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 643
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 202/411 (49%), Gaps = 8/411 (1%)
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL-HQGKW 247
RN VSW +M V+ +EG+ F +M + + + F + SLVTAC + GS+ +G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
VHG+V KSG+ + +++T++L++Y G + +RKVF+EM + ++VSWT+++VGYS
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM----PDRNVVSWTSLMVGYS 119
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
+G P + ++++ G+ N +G + G VVK GL
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES 427
V N+LI M V A Y+F+ ++D +SWNS + AQ+G E+ +F MR
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR-RF 238
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKS 487
++ TV +LS + G IH +K G S + V LL YA G +
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV-VCVCNTLLRMYAGAGRSVE 297
Query: 488 ARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSH 547
A +VF M K+ ++W+++++ + G + ++ L M+ N V FTS LAAC
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 548 SGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP 598
+G R+ H + + +V + + G + E+ + +MP
Sbjct: 358 PDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/623 (29%), Positives = 301/623 (48%), Gaps = 15/623 (2%)
Query: 62 DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLG 121
+ L+S+ S G + +A +FD + + S+ ++ Y N + + L R
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR--- 254
Query: 122 FFHDLV---VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVC 177
FHD V S +L + +H V+K G S V N L+ Y+ G
Sbjct: 255 -FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 178 SARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACT 237
A VF ++ ++++SW S+ ++V + +++ L L M N T S + AC
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 373
Query: 238 KLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
+G+ +HG VV SG+ N + +L++MY K G++ ++R+V +M D+V
Sbjct: 374 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM----PRRDVV 429
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX-XXXXXXXXMGMLLHGL 356
+W A+I GY++ P KAL F G+ N G LH
Sbjct: 430 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 489
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
+V G + V+N+LI MYAKC +S ++ +F +++++WN+ ++ A G E
Sbjct: 490 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 549
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
L++ +MRS S D + LSA A L L G +H A+K G S ++ A
Sbjct: 550 LKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS-FIFNAAA 607
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
+ Y+KCG+ + ++ +W+ +IS G G A F +ML+ +P V
Sbjct: 608 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHV 667
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
F S+L ACSH G+V +G + M+ R+ P+++H C++DLL R+G L EA FI K
Sbjct: 668 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 727
Query: 597 MPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMV 656
MP++P V+ + L C +H + G A + +L P+ YVL SN++A+ GRW V
Sbjct: 728 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDV 787
Query: 657 KQVREMIKQRGLNKVPGCSLVEI 679
+ VR+ + + + K CS V++
Sbjct: 788 ENVRKQMGFKNIKKKQACSWVKL 810
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 176/595 (29%), Positives = 280/595 (47%), Gaps = 21/595 (3%)
Query: 50 FHASLIVHGFPGDTKLLS----------LYASFGFLRHARRLFDHLPSPNLHSFKAMLRW 99
F + VHGF + LLS LY +G + +R++F+ +P N+ S+ +++
Sbjct: 75 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 134
Query: 100 YFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PS 158
Y +V+ Y R G + S+V+ +C L+D ++ V+KSG S
Sbjct: 135 YSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 193
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
V N L+ G+V A +FD+++ER+ +SW S+ AY QN E R+F+ MR
Sbjct: 194 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
+ N TV +L++ + G+ +HG VVK G + +LL MY G
Sbjct: 254 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXX 338
+A VF +M T DL+SW +++ + G L AL L +G N
Sbjct: 314 EANLVFKQMPTK----DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369
Query: 339 XXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVV 398
G +LHGLVV GLF N + NAL+ MY K +S++R V ++DVV
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 429
Query: 399 SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA-LPLGSSIHA 457
+WN+ I G A+ +AL FQ MR E S + +TVV VLSAC G L G +HA
Sbjct: 430 AWNALIGGYAEDEDPDKALAAFQTMRVEGVS-SNYITVVSVLSACLLPGDLLERGKPLHA 488
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
+ + G S +V +L+ YAKCGD S++ +F+G+ +N +TW+AM++ G G
Sbjct: 489 YIVSAGFESDE-HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGE 547
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM 577
+ L M ++ F+ L+A + ++ EG +L H + +L F +
Sbjct: 548 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAA 606
Query: 578 VDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLEL 632
D+ ++ G + E + + V + + + G H FE MLE+
Sbjct: 607 ADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 660
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/535 (28%), Positives = 245/535 (45%), Gaps = 15/535 (2%)
Query: 68 LYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLV 127
+Y FG ++ AR LFD +P N S+ M+ L+ + + F+ LG
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFR-KMCDLGIKPSSF 59
Query: 128 VFSIVLKAC----SELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKV 182
V + ++ AC S R+ VQ +H V KSG SD +V ++ Y G V +RKV
Sbjct: 60 VIASLVTACGRSGSMFREGVQ---VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 116
Query: 183 FDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL 242
F+E+ +RNVVSWTS+ V Y E + ++ MR V N+ ++ ++++C L
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
G+ + G VVKSG+ + SL++M G++ A +FD+M E D +SW ++
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM----SERDTISWNSI 232
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
Y+Q GH ++ +F+ N G +HGLVVK G
Sbjct: 233 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 292
Query: 363 FDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
V N L+ MYA +A VF+ KD++SWNS ++ G + +AL +
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKC 482
M S S + VT L+AC + G +H + GL I +G AL++ Y K
Sbjct: 353 MIS-SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI-IGNALVSMYGKI 410
Query: 483 GDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVL 542
G+ +R V M ++ V W+A+I GY D ++A F+ M E N + SVL
Sbjct: 411 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 470
Query: 543 AACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
+AC G + E + H F ++ + A+ G+L + D + +
Sbjct: 471 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 525
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 213/430 (49%), Gaps = 8/430 (1%)
Query: 170 YSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTV 229
Y+K G V AR +FD + RN VSW +M V+ +EG+ F +M + + + F +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 230 GSLVTACTKLGSL-HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEML 288
SLVTAC + GS+ +G VHG+V KSG+ + +++T++L++Y G + +RKVF+EM
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM- 120
Query: 289 TSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXX 348
+ ++VSWT+++VGYS +G P + ++++ G+ N
Sbjct: 121 ---PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 349 MGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCA 408
+G + G VVK GL V N+LI M V A Y+F+ ++D +SWNS + A
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
Q+G E+ +F MR ++ TV +LS + G IH +K G S
Sbjct: 238 QNGHIEESFRIFSLMR-RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV- 295
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
+ V LL YA G + A +VF M K+ ++W+++++ + G + ++ L M+
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
N V FTS LAAC +G R+ H + + +V + + G +
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414
Query: 589 EALDFIDKMP 598
E+ + +MP
Sbjct: 415 ESRRVLLQMP 424
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 375 MYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV 434
MY K V AR++F+ ++ VSWN+ +SG + G E +E F++M P V
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 435 TVVGVLSACASLGAL-PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD 493
+ +++AC G++ G +H F K GL+S +YV TA+L+ Y G +R VF+
Sbjct: 61 -IASLVTACGRSGSMFREGVQVHGFVAKSGLLS-DVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 494 GMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGE 553
M ++N V+W++++ GY +G+ I +++ M E NE + V+++C
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 554 GSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV---SVFGAYL 610
G ++ + + + ++ +L GN+ A D+M + + S+ AY
Sbjct: 179 GRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 611 HGCGLHSEFEL 621
+ F +
Sbjct: 238 QNGHIEESFRI 248
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 284/577 (49%), Gaps = 50/577 (8%)
Query: 147 RLHCH-VIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
+LH V+ S D F+ + L+ Y++ A VFDEI RN S+ ++ +AY +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 206 CAVEGLRLF-NRMREGFVDGNDFTVGSLVTACTK----------LGSLHQGKWVHGYVVK 254
+ LF + + + S+ +C LGSL + VHG+V++
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSL--ARQVHGFVIR 160
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
G + F+ ++ Y KC +I ARKVFDEM E D+VSW +MI GYSQ G
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEM----SERDVVSWNSMISGYSQSGSFED 216
Query: 315 ALELFTDR-NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALI 373
+++ + PN G+ +H +++ + + + NA+I
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVI 276
Query: 374 DMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS-------- 425
YAKC + AR +F+ +KD V++ + ISG G EA+ +F M S
Sbjct: 277 GFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNA 336
Query: 426 ---------------ESF-------SPPDAVTVVGVLSACASLGALPLGSSIHAFALKDG 463
SF S P+ VT+ +L + L G IHAFA+++G
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG 396
Query: 464 LVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALF 523
+IYV T++++ YAK G A+ VFD +++ + W+A+I+ Y + GD + +LF
Sbjct: 397 -ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLF 455
Query: 524 RDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLAR 583
M +P++V T+VL+A +HSG +F M + + P ++HYACMV +L+R
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSR 515
Query: 584 AGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLV 643
AG L +A++FI KMP+ P V+GA L+G + + E+ A R+ E+ P+ Y ++
Sbjct: 516 AGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIM 575
Query: 644 SNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+NLY GRW + VR +K+ GL K+PG S +E +
Sbjct: 576 ANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETE 612
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 222/512 (43%), Gaps = 45/512 (8%)
Query: 47 VKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFL 102
V + HA ++V D +KL+S Y R A +FD + N S+ A+L Y
Sbjct: 41 VLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 103 NNLHSDVVSFYHLTRYTLGFFH------DLVVFSIVLKACSELRDV---VQAARLHCHVI 153
++ D S + L+ + D + S VLKA S D A ++H VI
Sbjct: 101 REMYFDAFSLF-LSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 154 KSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR 212
+ G SD FV NG++ Y+KC ++ SARKVFDE++ER+VVSW SM Y Q+ + +
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 213 LFNRMRE-GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
++ M N TV S+ AC + L G VH ++++ I ++ L +++ Y
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 272 VKCGDIGDARKVFDEMLTSD---------------------------DELDLVSWTAMIV 304
KCG + AR +FDEM D + + L +W AMI
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMIS 339
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
G Q H + + F + G PN G +H ++ G +
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADN 399
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
N V ++ID YAK + A+ VF+ + +++W + I+ A G + A +F +M+
Sbjct: 400 NIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQ 459
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
+ PD VT+ VLSA A G + I L + + +++ ++ G
Sbjct: 460 CLG-TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGK 518
Query: 485 AKSARMVFDGMG-EKNAVTWSAMISGYGMQGD 515
A M + A W A+++G + GD
Sbjct: 519 LSDAMEFISKMPIDPIAKVWGALLNGASVLGD 550
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/553 (30%), Positives = 274/553 (49%), Gaps = 11/553 (1%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGPS----DGFVLNGLVDAYSKCGHVCSARKVFDEIA 187
+LK C+ + +H H+I + S D + +N L++ Y KC ARK+FD +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR-EGFVDGNDFTVGSLVTACTKLGSLHQGK 246
ERNVVSW +M Y + E L+LF M G N+F + +C+ G + +GK
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
HG +K G+ + F+ +L+ MY C G+A +V D++ DL +++ + GY
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL----PYCDLSVFSSALSGY 212
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
+ G + L++ + N + + +H +V+ G
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
ALI+MY KC V A+ VF+ T +++ + + Q S EAL +F +M ++
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
PP+ T +L++ A L L G +H LK G + + VG AL+N YAK G +
Sbjct: 333 EV-PPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN-HVMVGNALVNMYAKSGSIE 390
Query: 487 SARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
AR F GM ++ VTW+ MISG G G ++ F M+ PN + F VL ACS
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
H G V +G F+ + ++ + P ++HY C+V LL++AG K+A DF+ P++ V +
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQR 666
L+ C + + LG+ +E +P+ + YVL+SN++A W V +VR ++ R
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570
Query: 667 GLNKVPGCSLVEI 679
G+ K PG S + I
Sbjct: 571 GVKKEPGVSWIGI 583
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 234/515 (45%), Gaps = 23/515 (4%)
Query: 12 SKSLIQFRSLSSYIAFTLPHPPTL----YLSPICKNIDTVK---KFHASLIVHGFPGDTK 64
+ L+++ L+S + + P + L +C N ++ HA LIV +
Sbjct: 8 EQRLLKWDKLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAE 67
Query: 65 -------LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTR 117
L++LY AR+LFD +P N+ S+ AM++ Y + +V+ +
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 118 YTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHV 176
++ + V ++V K+CS + + + H +K G S FV N LV YS C
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 177 CSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTA 235
A +V D++ ++ ++S Y++ EGL + + E FV N+ T S +
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRL 246
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
+ L L+ VH +V+ G + +L+NMY KCG + A++VFD+ + L+
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHG 355
T ++ Y Q +AL LF+ + + PN G LLHG
Sbjct: 307 ----TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHG 362
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
LV+K G ++ V NAL++MYAK + DAR F +D+V+WN+ ISGC+ G E
Sbjct: 363 LVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGRE 422
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTAL 475
ALE F RM P+ +T +GVL AC+ +G + G +K V I T +
Sbjct: 423 ALEAFDRMIFTG-EIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCI 481
Query: 476 LNFYAKCGDAKSAR-MVFDGMGEKNAVTWSAMISG 509
+ +K G K A + E + V W +++
Sbjct: 482 VGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 291/574 (50%), Gaps = 31/574 (5%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEI 186
+F L+ + ++ Q +LH +I+ D + L+ A S C A +VF+++
Sbjct: 18 IFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV 77
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
E NV S+ A+ QN + +F+ M+ + ++FT L+ AC+ L K
Sbjct: 78 QEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVK 137
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG--DARKVFDEMLTSDDELDLVSWTAMIV 304
+H ++ K G+ + ++ +L++ Y +CG +G DA K+F++M E D VSW +M+
Sbjct: 138 MMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKM----SERDTVSWNSMLG 193
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
G + G A LF + +P M LF+
Sbjct: 194 GLVKAGELRDARRLFDE------MPQRDLISWNTMLDGYARCREMSKAFE-------LFE 240
Query: 365 NTPVRNA-----LIDMYAKCHLVSDARYVFETTV--QKDVVSWNSFISGCAQSGSAYEAL 417
P RN ++ Y+K + AR +F+ K+VV+W I+G A+ G EA
Sbjct: 241 KMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
+ +M + DA V+ +L+AC G L LG IH+ LK + + YV ALL+
Sbjct: 301 RLVDQMVASGLKF-DAAAVISILAACTESGLLSLGMRIHSI-LKRSNLGSNAYVLNALLD 358
Query: 478 FYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVV 537
YAKCG+ K A VF+ + +K+ V+W+ M+ G G+ G G +I LF M +E P++V
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 538 FTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
F +VL +C+H+G++ EG F+ M + + VP ++HY C+VDLL R G LKEA+ + M
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Query: 598 PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVK 657
P++P V ++GA L C +H+E ++ + + +++L P Y L+SN+YA+ W V
Sbjct: 479 PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVA 538
Query: 658 QVREMIKQRGLNKVPGCSLVEIDLNDTYSKVTIF 691
+R +K G+ K G S VE L D + T+F
Sbjct: 539 DIRSKMKSMGVEKPSGASSVE--LEDGIHEFTVF 570
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 244/521 (46%), Gaps = 28/521 (5%)
Query: 39 PICKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFK 94
P C N++ VK+ HA +I D KL+S + A R+F+ + PN+H
Sbjct: 27 PKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCN 86
Query: 95 AMLRWYFLNNL-HSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVI 153
+++R + N+ + F + R+ G F D + +LKACS + +H H+
Sbjct: 87 SLIRAHAQNSQPYQAFFVFSEMQRF--GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 154 KSG-PSDGFVLNGLVDAYSKCG--HVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEG 210
K G SD +V N L+D YS+CG V A K+F++++ER+ VSW SM V+ +
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 211 LRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLN 269
RLF+ M + + N G C ++ + + + N+ ++++
Sbjct: 205 RRLFDEMPQRDLISWNTMLDG--YARCREMSKAFE-------LFEKMPERNTVSWSTMVM 255
Query: 270 MYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILP 329
Y K GD+ AR +FD+M ++V+WT +I GY+++G +A L +G+
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAK--NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 330 NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF 389
+ +GM +H ++ + L N V NAL+DMYAKC + A VF
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
+KD+VSWN+ + G G EA+E+F RMR E PD VT + VL +C G +
Sbjct: 374 NDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIR-PDKVTFIAVLCSCNHAGLI 432
Query: 450 PLG-SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMI 507
G ++ LV + G L++ + G K A V M E N V W A++
Sbjct: 433 DEGIDYFYSMEKVYDLVPQVEHYG-CLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 491
Query: 508 SGYGMQGDGVGSIALFRDMLK-EECEP-NEVVFTSVLAACS 546
M + + + +++K + C+P N + +++ AA
Sbjct: 492 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE 532
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 262/491 (53%), Gaps = 6/491 (1%)
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
N+ + S+ +V N E L LF +R+ + + FT ++ ACT+ S G +H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
VVK G + + TSLL++Y G + DA K+FDE+ + +V+WTA+ GY+
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI----PDRSVVTWTALFSGYTTS 190
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
G +A++LF G+ P+ G + + + + N+ VR
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 370 NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS 429
L+++YAKC + AR VF++ V+KD+V+W++ I G A + E +E+F +M E+
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 430 PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSAR 489
P D ++VG LS+CASLGAL LG + + ++ ++++ AL++ YAKCG
Sbjct: 311 P-DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT-NLFMANALIDMYAKCGAMARGF 368
Query: 490 MVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSG 549
VF M EK+ V +A ISG G S A+F K P+ F +L C H+G
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAG 428
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAY 609
++ +G R F+ + +++HY CMVDL RAG L +A I MP++P V+GA
Sbjct: 429 LIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488
Query: 610 LHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLN 669
L GC L + +L E ++ ++ L P A YV +SN+Y+ GRW +VR+M+ ++G+
Sbjct: 489 LSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMK 548
Query: 670 KVPGCSLVEID 680
K+PG S +E++
Sbjct: 549 KIPGYSWIELE 559
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 242/505 (47%), Gaps = 34/505 (6%)
Query: 43 NIDTVKKFHASLIVHGFPGDTKLLSLYAS----FGFLRHARRLFDHLPSPNLHSFKAMLR 98
++ +K+ H SLI H DT L++L F +++ LF H PN+ + +++
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 99 WYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-P 157
+ N+L + + + R + H F +VLKAC+ LH V+K G
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFT-FPLVLKACTRASSRKLGIDLHSLVVKCGFN 143
Query: 158 SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM 217
D + L+ YS G + A K+FDEI +R+VV+WT++F Y + E + LF +M
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM 203
Query: 218 REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDI 277
E V + + + +++AC +G L G+W+ Y+ + + NSF+ T+L+N+Y KCG +
Sbjct: 204 VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM 263
Query: 278 GDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXX 337
AR VFD M+ E D+V+W+ MI GY+ P + +ELF + P+
Sbjct: 264 EKARSVFDSMV----EKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGF 319
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDV 397
+G L+ + N + NALIDMYAKC ++ VF+ +KD+
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA 457
V N+ ISG A++G + +F + S PD T +G+L C +HA
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS-PDGSTFLGLLCGC-----------VHA 427
Query: 458 FALKDGL-----VSCSIYVGTA------LLNFYAKCGDAKSA-RMVFDGMGEKNAVTWSA 505
++DGL +SC + +++ + + G A R++ D NA+ W A
Sbjct: 428 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 487
Query: 506 MISGYGMQGDGVGSIALFRDMLKEE 530
++SG + D + + ++++ E
Sbjct: 488 LLSGCRLVKDTQLAETVLKELIALE 512
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 276/548 (50%), Gaps = 27/548 (4%)
Query: 139 LRDVVQAARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSM 197
L DV Q H ++K G + F+ N L+ AY+K A K+FDE+ RN+V+W +
Sbjct: 52 LSDVKQE---HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNIL 108
Query: 198 FVAYVQNDCAVE-----GLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYV 252
+Q D G +R+ V + + L+ CT ++ G +H +
Sbjct: 109 IHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLM 168
Query: 253 VKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHP 312
VK G+ + F +TSL++ Y KCG I +AR+VF+ +L + DLV W A++ Y G
Sbjct: 169 VKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL----DRDLVLWNALVSSYVLNGMI 224
Query: 313 LKALELF----TDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPV 368
+A L +D+N G +H ++ K + PV
Sbjct: 225 DEAFGLLKLMGSDKN------RFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPV 278
Query: 369 RNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESF 428
AL++MYAK + +SDAR FE+ V ++VVSWN+ I G AQ+G EA+ +F +M E+
Sbjct: 279 ATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENL 338
Query: 429 SPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSA 488
P D +T VLS+CA A+ + A K G + V +L++ Y++ G+ A
Sbjct: 339 QP-DELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF-LSVANSLISSYSRNGNLSEA 396
Query: 489 RMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHS 548
+ F + E + V+W+++I G S+ +F ML ++ +P+++ F VL+ACSH
Sbjct: 397 LLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHG 455
Query: 549 GMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGA 608
G+V EG R F M +HY C++DLL RAG + EA D ++ MP +P A
Sbjct: 456 GLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAA 515
Query: 609 YLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGL 668
+ GC +H + E + +++LE+ P + Y ++SN Y S+G W +R+ ++
Sbjct: 516 FTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCY 575
Query: 669 N-KVPGCS 675
N K PGCS
Sbjct: 576 NPKTPGCS 583
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 201/427 (47%), Gaps = 21/427 (4%)
Query: 37 LSPICKNIDTVKKFHASLIVHGFPG----DTKLLSLYASFGFLRHARRLFDHLPSPNLHS 92
LS ++ VK+ H ++ G KLL Y A +LFD +P N+ +
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVT 104
Query: 93 FKAMLRWYFL---NNLHSDVVSFYHLTRYTLGFFH-DLVVFSIVLKACSELRDVVQAARL 148
+ ++ + H + F +L+R D V F +++ C++ ++ +L
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL 164
Query: 149 HCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCA 207
HC ++K G S F LV Y KCG + AR+VF+ + +R++V W ++ +YV N
Sbjct: 165 HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMI 224
Query: 208 VEGLRLFNRM--REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLAT 265
E L M + G+ FT SL++AC + QGK +H + K + +AT
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVAT 280
Query: 266 SLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWA 325
+LLNMY K + DAR+ F+ M+ ++VSW AMIVG++Q G +A+ LF
Sbjct: 281 ALLNMYAKSNHLSDARECFESMVVR----NVVSWNAMIVGFAQNGEGREAMRLFGQMLLE 336
Query: 326 GILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDA 385
+ P+ + +V K G D V N+LI Y++ +S+A
Sbjct: 337 NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA 396
Query: 386 RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
F + + D+VSW S I A G A E+L+MF+ M + PD +T + VLSAC+
Sbjct: 397 LLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK--LQPDKITFLEVLSACSH 454
Query: 446 LGALPLG 452
G + G
Sbjct: 455 GGLVQEG 461
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 8/264 (3%)
Query: 44 IDTVKKFHASLIVHGF----PGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRW 99
I+ K+ HA L + P T LL++YA L AR F+ + N+ S+ AM+
Sbjct: 257 IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 100 YFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSD 159
+ N + + + D + F+ VL +C++ + + ++ V K G +D
Sbjct: 317 FAQNGEGREAMRLFGQMLLE-NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSAD 375
Query: 160 GF-VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
V N L+ +YS+ G++ A F I E ++VSWTS+ A + A E L++F M
Sbjct: 376 FLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML 435
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK-SGIHVNSFLATSLLNMYVKCGDI 277
+ + + T +++AC+ G + +G + + I T L+++ + G I
Sbjct: 436 QK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFI 494
Query: 278 GDARKVFDEMLTSDDELDLVSWTA 301
+A V + M T L ++T
Sbjct: 495 DEASDVLNSMPTEPSTHALAAFTG 518
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 282/522 (54%), Gaps = 12/522 (2%)
Query: 133 LKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNV 191
L++C RD V+ +R+H +++K+G D F ++ L+ A+S + A +F+ ++ N+
Sbjct: 35 LRSC---RDTVEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNL 90
Query: 192 VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGY 251
+ +M Y +D +FN++R + + F+ + + +C++ + G+ +HG
Sbjct: 91 FMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGI 150
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
++SG V + L +L++ Y CG I DARKVFDEM S +D V+++ ++ GY Q
Sbjct: 151 ALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQS---VDAVTFSTLMNGYLQVSK 207
Query: 312 PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA 371
AL+LF + ++ N H L +K GL + + A
Sbjct: 208 KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITA 267
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
LI MY K +S AR +F+ ++KDVV+WN I A++G E + + ++M+ E P
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKM-KP 326
Query: 432 DAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
++ T VG+LS+CA A +G ++ A L++ ++ +GTAL++ YAK G + A +
Sbjct: 327 NSSTFVGLLSSCAYSEAAFVGRTV-ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 492 FDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECE--PNEVVFTSVLAACSHSG 549
F+ M +K+ +W+AMISGYG G ++ LF M +E C+ PNE+ F VL ACSH G
Sbjct: 386 FNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGG 445
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAY 609
+V EG R F M +F P ++HY C+VDLL RAG L+EA + I +P+ + + A
Sbjct: 446 LVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRAL 505
Query: 610 LHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDG 651
L C ++ +LGE + R+ E+ +L++ +A G
Sbjct: 506 LAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG 547
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 203/423 (47%), Gaps = 21/423 (4%)
Query: 41 CKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAM 96
C++ V + H ++ G D +KLL+ ++S +R+A +F+H+ + NL F M
Sbjct: 38 CRDTVEVSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTM 96
Query: 97 LRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
+R Y +++ S ++ R G D F LK+CS V LH ++S
Sbjct: 97 IRGYSISDEPERAFSVFNQLRAK-GLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRS- 154
Query: 157 PSDGFVL-----NGLVDAYSKCGHVCSARKVFDEIAER-NVVSWTSMFVAYVQNDCAVEG 210
GF++ N L+ Y CG + ARKVFDE+ + + V+++++ Y+Q
Sbjct: 155 ---GFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALA 211
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
L LF MR+ V N T+ S ++A + LG L + H +K G+ ++ L T+L+ M
Sbjct: 212 LDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM 271
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y K G I AR++FD + D+V+W MI Y++ G + + L + + PN
Sbjct: 272 YGKTGGISSARRIFDCAIRK----DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPN 327
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE 390
+G + L+ + + + + AL+DMYAK L+ A +F
Sbjct: 328 SSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 391 TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS-PPDAVTVVGVLSACASLGAL 449
KDV SW + ISG G A EA+ +F +M E+ P+ +T + VL+AC+ G +
Sbjct: 388 RMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLV 447
Query: 450 PLG 452
G
Sbjct: 448 MEG 450
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 191/704 (27%), Positives = 338/704 (48%), Gaps = 61/704 (8%)
Query: 30 PHPPTLYLS---PICKNIDTV---KKFHASLIVHGFPGDT----KLLSLYASFGFL-RHA 78
P P ++ + P+C + K H+ +I G DT L+S+YA FGF+ A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 79 RRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVV-SFYHLTRYTLGFFHDLVVFSIVLKACS 137
FD + ++ S+ A++ + NN+ +D SF + + + + VL C+
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE--PNYATIANVLPVCA 235
Query: 138 ELRDVV---QAARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVV 192
+ + ++H +V++ + FV N LV Y + G + A +F + +++V
Sbjct: 236 SMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 193 SWTSMFVAYVQNDCAVEGLRLF-NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGY 251
SW + Y N + +LF N + +G V + T+ S++ C +L L GK +H Y
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 252 VVK-SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRG 310
+++ S + ++ + +L++ Y + GD A F M T D ++SW A++ ++
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKD----IISWNAILDAFADSP 411
Query: 311 HPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF---DNTP 367
+ L L I + +HG VK GL +
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPK 471
Query: 368 VRNALIDMYAKCHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ----- 421
+ NAL+D YAKC V A +F + ++ +VS+NS +SG SGS +A +F
Sbjct: 472 LGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTT 531
Query: 422 ---------RMRSESFSP----------------PDAVTVVGVLSACASLGALPLGSSIH 456
R+ +ES P P+ VT++ +L CA L +L L H
Sbjct: 532 DLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCH 591
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDG 516
+ ++ GL I + LL+ YAKCG K A VF ++ V ++AM++GY + G G
Sbjct: 592 GYIIRGGL--GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRG 649
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC 576
++ ++ M + +P+ V T++L AC H+G++ +G +++ + P+M+ YAC
Sbjct: 650 KEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYAC 709
Query: 577 MVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQ 636
VDL+AR G L +A F+ +MPV+P +++G L C ++ +LG +L+ D
Sbjct: 710 AVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDD 769
Query: 637 ACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+VL+SN+YA+D +W V ++R ++K++ + K GCS +E+D
Sbjct: 770 TGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVD 813
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 196/411 (47%), Gaps = 30/411 (7%)
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGH 175
R GF D VF V+KAC+ + D+ LH V K G + V +++ Y+KC
Sbjct: 12 RLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRR 71
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDG---NDFTVGSL 232
+ +K+F ++ + V W + + C E +R F M F D + T +
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMH--FADEPKPSSVTFAIV 128
Query: 233 VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDI-GDARKVFDEMLTSD 291
+ C +LG + GK +H Y++K+G+ ++ + +L++MY K G I DA FD +
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIA--- 185
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELF-------TDRNWAGI---LPNXXXXXXXXXXX 341
+ D+VSW A+I G+S+ A F T+ N+A I LP
Sbjct: 186 -DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLP-------VCASM 237
Query: 342 XXXXXXXMGMLLHGLVV-KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSW 400
G +H VV + L + V N+L+ Y + + +A +F KD+VSW
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFAL 460
N I+G A + ++A ++F + + PD+VT++ +L CA L L G IH++ L
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 461 KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYG 511
+ + VG AL++FYA+ GD +A F M K+ ++W+A++ +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 23/286 (8%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G LHG V K G + V ++++MYAKC + D + +F D V WN ++G +
Sbjct: 40 GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV 99
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
S E + F+ M P +VT VL C LG G S+H++ +K GL ++
Sbjct: 100 S-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTL 158
Query: 470 YVGTALLNFYAKCG----DAKSARMVFDGMGEKNAVTWSAMISGY---GMQGDGVGSIAL 522
VG AL++ YAK G DA +A FDG+ +K+ V+W+A+I+G+ M D S L
Sbjct: 159 -VGNALVSMYAKFGFIFPDAYTA---FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCL 214
Query: 523 FRDMLKEECEPNEVVFTSVLAACS--HSGMVGEGSRLFHMMCRELNFVPSMKHYAC--MV 578
MLKE EPN +VL C+ + R H + +++ + + C +V
Sbjct: 215 ---MLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT-HVFVCNSLV 270
Query: 579 DLLARAGNLKEALDFIDKMPVQPGVS---VFGAYLHGCGLHSEFEL 621
R G ++EA +M + VS V Y C F+L
Sbjct: 271 SFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
+ Q R S D + V+ ACAS+ L G ++H K G ++CS V ++LN
Sbjct: 6 QFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACS-EVSKSVLN 64
Query: 478 FYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDM-LKEECEPNEV 536
YAKC + +F M + V W+ +++G + G ++ F+ M +E +P+ V
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSV 123
Query: 537 VFTSVLAACSHSG 549
F VL C G
Sbjct: 124 TFAIVLPLCVRLG 136
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/460 (33%), Positives = 251/460 (54%), Gaps = 10/460 (2%)
Query: 224 GNDFT----VGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD 279
N+F+ V ++ C + G++ + K HG +++ + + L L+N Y KCG +
Sbjct: 55 SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 114
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXX 339
AR+VFD ML E LVSW MI Y++ +AL++F + G +
Sbjct: 115 ARQVFDGML----ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLS 170
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS 399
LH L VK + N V AL+D+YAKC ++ DA VFE+ K V+
Sbjct: 171 ACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT 230
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA 459
W+S ++G Q+ + EAL +++R + S + T+ V+ AC++L AL G +HA
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ-NQFTLSSVICACSNLAALIEGKQMHAVI 289
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGS 519
K G S +++V ++ ++ YAKCG + + ++F + EKN W+ +ISG+
Sbjct: 290 CKSGFGS-NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEV 348
Query: 520 IALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
+ LF M ++ PNEV F+S+L+ C H+G+V EG R F +M P++ HY+CMVD
Sbjct: 349 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 408
Query: 580 LLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACY 639
+L RAG L EA + I +P P S++G+ L C ++ EL EVA ++ EL P+ A
Sbjct: 409 ILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGN 468
Query: 640 YVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
+VL+SN+YA++ +W + + R++++ + KV G S ++I
Sbjct: 469 HVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 185/381 (48%), Gaps = 16/381 (4%)
Query: 48 KKFHASLIVHGFPGDTKLLSL----YASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K H +I GD LL++ Y+ GF+ AR++FD + +L S+ M+ Y N
Sbjct: 81 KACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN 140
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFV 162
+ S+ + + L GF S VL AC D ++ +LHC +K+ + +V
Sbjct: 141 RMESEALDIF-LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
L+D Y+KCG + A +VF+ + +++ V+W+SM YVQN E L L+ R + +
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
+ N FT+ S++ AC+ L +L +GK +H + KSG N F+A+S ++MY KCG + ++
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
+F E+ + EL W +I G+++ P + + LF G+ PN
Sbjct: 320 IFSEVQEKNLEL----WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCG 375
Query: 343 XXXXXXMGMLLHGLV-VKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS-W 400
G L+ GL N + ++D+ + L+S+A + ++ S W
Sbjct: 376 HTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIW 435
Query: 401 NSFISGCAQSGSAYEALEMFQ 421
S ++ C Y+ LE+ +
Sbjct: 436 GSLLASC----RVYKNLELAE 452
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 273 bits (699), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 193/683 (28%), Positives = 328/683 (48%), Gaps = 43/683 (6%)
Query: 35 LYLSPICKNIDTVKKFHASLIV---HGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLH 91
L LS +++ K HAS + L+S Y GF R A +F L SP +
Sbjct: 87 LRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVV 146
Query: 92 SFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCH 151
S+ A++ + NL + + + R + F +L AC + ++H
Sbjct: 147 SYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGL 206
Query: 152 VIKSGPSDG-FVLNGLVDAYSK-CGHVCS-ARKVFDEIAERNVVSWTSMFVAYVQNDCAV 208
++KSG + FV N L+ Y K G C K+FDEI +R+V SW ++ + V+ +
Sbjct: 207 IVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSH 266
Query: 209 EGLRLFNRMR--EGF-VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLAT 265
+ LF M EGF VD FT+ +L+++CT L +G+ +HG ++ G+ +
Sbjct: 267 KAFDLFYEMNRVEGFGVDS--FTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNN 324
Query: 266 SLLNMYVKCGDIGDARKVFDEMLTSD---------------------------DELDLVS 298
+L+ Y K D+ +++ M+ D E + ++
Sbjct: 325 ALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTIT 384
Query: 299 WTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
+ A++ G+ + GH LKAL+LFTD G+ + +HG +
Sbjct: 385 YNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCI 444
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFET--TVQKDVVSWNSFISGCAQSGSAYEA 416
K G N ++ AL+DM +C ++DA +F+ + + S I G A++G +A
Sbjct: 445 KFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKA 504
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
+ +F R E D V++ +L+ C +LG +G IH +ALK G S I +G +L+
Sbjct: 505 VSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFS-DISLGNSLI 563
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
+ YAKC D+ A +F+ M E + ++W+++IS Y +Q +G ++AL+ M ++E +P+ +
Sbjct: 564 SMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDII 623
Query: 537 VFTSVLAA--CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFI 594
T V++A + S + LF M + P+ +HY V +L G L+EA D I
Sbjct: 624 TLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTI 683
Query: 595 DKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWG 654
+ MPVQP VSV A L C +HS + + + +L P+ Y+L SN+Y++ G W
Sbjct: 684 NSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWH 743
Query: 655 MVKQVREMIKQRGLNKVPGCSLV 677
+ +RE +++RG K P S +
Sbjct: 744 RSEMIREEMRERGYRKHPAKSWI 766
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 209/479 (43%), Gaps = 59/479 (12%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSAR 180
GFF+ +L+ ++ DV +H +K + N L+ Y K G A
Sbjct: 82 GFFY-------LLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAI 134
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE-GFVDGNDFTVGSLVTACTKL 239
VF ++ VVS+T++ + + + +E L++F RMR+ G V N++T +++TAC ++
Sbjct: 135 LVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRV 194
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG----DARKVFDEMLTSDDELD 295
G +HG +VKSG + F++ SL+++Y K D G D K+FDE+ + D
Sbjct: 195 SRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK--DSGSSCDDVLKLFDEI----PQRD 248
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWA-GILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
+ SW ++ + G KA +LF + N G + G LH
Sbjct: 249 VASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELH 308
Query: 355 GLVVKCGLFDNTPVRNALIDMYAK-------------------------------CHLVS 383
G ++ GL V NALI Y+K +V
Sbjct: 309 GRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVD 368
Query: 384 DARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSAC 443
A +F +K+ +++N+ ++G ++G +AL++F M D ++ + AC
Sbjct: 369 SAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD-FSLTSAVDAC 427
Query: 444 ASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD----GMGEKN 499
+ + IH F +K G + + + TALL+ +C A +FD +
Sbjct: 428 GLVSEKKVSEQIHGFCIKFG-TAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSK 486
Query: 500 AVTWSAMISGYGMQGDGVGSIALF-RDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRL 557
A T ++I GY G +++LF R + +++ +EV T +LA C G G ++
Sbjct: 487 ATT--SIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 184/598 (30%), Positives = 284/598 (47%), Gaps = 63/598 (10%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T LL LY L A ++F+ +P FK++ W N++ S ++ + + F
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMP------FKSLETW---NHMMS-LLGHRGFLKECMFF 202
Query: 123 FHDLV---------VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSK 172
F +LV F VLK S ++D+ + +LHC K G + V+N L+ AY K
Sbjct: 203 FRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGK 262
Query: 173 CGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSL 232
CG+ A ++F + ++VSW ++ A +++ ++ L+LF M E N T S+
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSV 322
Query: 233 VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD 292
+ + + L G+ +HG ++K+G L +L++ Y KCG++ D+R FD +
Sbjct: 323 LGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI----R 378
Query: 293 ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGML 352
+ ++V W A++ GY+ + P+ L LF G P
Sbjct: 379 DKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQ---- 433
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE---------------------- 390
LH ++V+ G DN V ++L+ YAK L++DA + +
Sbjct: 434 LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRG 493
Query: 391 ----------TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
T Q D VSWN I+ C++S E +E+F+ M + PD T V +L
Sbjct: 494 QYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR-PDKYTFVSIL 552
Query: 441 SACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNA 500
S C+ L L LGSSIH K +V L++ Y KCG +S VF+ EKN
Sbjct: 553 SLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNL 612
Query: 501 VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
+TW+A+IS G+ G G ++ F++ L +P+ V F S+L AC H GMV EG LF
Sbjct: 613 ITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQK 672
Query: 561 MCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSE 618
M ++ P M HY C VDLLAR G LKEA I +MP V+ +L GC +E
Sbjct: 673 M-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAE 729
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 218/477 (45%), Gaps = 29/477 (6%)
Query: 102 LNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF 161
L N + VVS ++ R F + ++ + CS L V +
Sbjct: 8 LANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPV-----------------Y 50
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
V N ++ Y K G V A KVFD++ ERN VS+ ++ Y + + +F+ MR
Sbjct: 51 VCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFG 110
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHV-NSFLATSLLNMYVKCGDIGDA 280
N TV L++ C L + G +HG +K G+ + ++F+ T LL +Y + + A
Sbjct: 111 YLPNQSTVSGLLS-CASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX 340
+VF++M E +W M+ RG + + F + G
Sbjct: 169 EQVFEDMPFKSLE----TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 341 XXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSW 400
+ LH K GL V N+LI Y KC A +F+ D+VSW
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFAL 460
N+ I A+S + +AL++F M FSP T V VL + + L G IH +
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQG-TYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 461 KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSI 520
K+G + I +G AL++FYAKCG+ + +R+ FD + +KN V W+A++SGY + DG +
Sbjct: 344 KNGCET-GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICL 401
Query: 521 ALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPS--MKHYA 575
+LF ML+ P E F++ L +C + + S + M + ++V S M+ YA
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 150/642 (23%), Positives = 262/642 (40%), Gaps = 75/642 (11%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
++SLY G + A ++FD +P N SF +++ Y + RY G+
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY-FGY 111
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSAR 180
+ S +L +C+ L DV +LH +K G +D FV L+ Y + + A
Sbjct: 112 LPNQSTVSGLL-SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV-----TA 235
+VF+++ +++ +W M E + F RE G T S + +
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFF---RELVRMGASLTESSFLGVLKGVS 226
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
C K L K +H K G+ + SL++ Y KCG+ A ++F + D
Sbjct: 227 CVK--DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA----GSWD 280
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHG 355
+VSW A+I ++ +PLKAL+LF G PN G +HG
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
+++K G + NALID YAKC + D+R F+ K++V WN+ +SG A
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI- 399
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTAL 475
L +F +M F P + T L +C L S I +D + YV ++L
Sbjct: 400 CLSLFLQMLQMGFRPTE-YTFSTALKSCCVTELQQLHSVIVRMGYED-----NDYVLSSL 453
Query: 476 LNFYAKCGDAKSARMVFD--------------------------------GMGEKNAVTW 503
+ YAK A ++ D + + + V+W
Sbjct: 454 MRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSW 513
Query: 504 SAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
+ I+ I LF+ ML+ P++ F S+L+ CS + GS + H +
Sbjct: 514 NIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI-HGLIT 572
Query: 564 ELNFVPSMKHYAC--MVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFEL 621
+ +F + C ++D+ + G+++ + ++ + + + A + G+H
Sbjct: 573 KTDF-SCADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHG---Y 627
Query: 622 GEVAIRRMLE-----LHPDQACYYVLVSNLYASDGRWGMVKQ 658
G+ A+ + E PD+ + +++ GMVK+
Sbjct: 628 GQEALEKFKETLSLGFKPDRVSFISILTACRHG----GMVKE 665
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 210/332 (63%), Gaps = 3/332 (0%)
Query: 349 MGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCA 408
+G +H +V++ G V+N+L+ +YA C V+ A VF+ +KD+V+WNS I+G A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
++G EAL ++ M S+ P D T+V +LSACA +GAL LG +H + +K GL +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKP-DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-N 123
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
++ LL+ YA+CG + A+ +FD M +KN+V+W+++I G + G G +I LF+ M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 529 EE-CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
E P E+ F +L ACSH GMV EG F M E P ++H+ CMVDLLARAG +
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 588 KEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLY 647
K+A ++I MP+QP V ++ L C +H + +L E A ++L+L P+ + YVL+SN+Y
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 648 ASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
AS+ RW V+++R+ + + G+ KVPG SLVE+
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 147/297 (49%), Gaps = 7/297 (2%)
Query: 239 LGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVS 298
+ + G+ +H V++SG ++ SLL++Y CGD+ A KVFD+M E DLV+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM----PEKDLVA 56
Query: 299 WTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
W ++I G+++ G P +AL L+T+ N GI P+ +G +H ++
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALE 418
K GL N N L+D+YA+C V +A+ +F+ V K+ VSW S I G A +G EA+E
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 419 MFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNF 478
+F+ M S P +T VG+L AC+ G + G ++ + I +++
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 236
Query: 479 YAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPN 534
A+ G K A M + N V W ++ + GD +A F + + EPN
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD--SDLAEFARIQILQLEPN 291
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 161/335 (48%), Gaps = 20/335 (5%)
Query: 139 LRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSM 197
+ DV +H VI+SG S +V N L+ Y+ CG V SA KVFD++ E+++V+W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 198 FVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGI 257
+ +N E L L+ M + + FT+ SL++AC K+G+L GK VH Y++K G+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 258 HVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALE 317
N + LL++Y +CG + +A+ +FDEM+ + VSWT++IVG + G +A+E
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS----VSWTSLIVGLAVNGFGKEAIE 176
Query: 318 LFTD-RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR------N 370
LF + G+LP GM+ G + + +
Sbjct: 177 LFKYMESTEGLLP-----CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG 231
Query: 371 ALIDMYAKCHLVSDA-RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS 429
++D+ A+ V A Y+ +Q +VV W + + C G + L F R++
Sbjct: 232 CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS--DLAEFARIQILQLE 289
Query: 430 PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL 464
P + V + + AS I L+DG+
Sbjct: 290 PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 324
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 48 KKFHASLIVHGFPG----DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
+ H+ +I GF LL LYA+ G + A ++FD +P +L ++ +++ + N
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-V 162
+ ++ Y + G D +L AC+++ + R+H ++IK G +
Sbjct: 68 GKPEEALALY-TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR--EG 220
N L+D Y++CG V A+ +FDE+ ++N VSWTS+ V N E + LF M EG
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 221 FVDGNDFTVGSLVTACTKLGSLHQG 245
+ VG ++ AC+ G + +G
Sbjct: 187 LLPCEITFVG-ILYACSHCGMVKEG 210
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 190/652 (29%), Positives = 303/652 (46%), Gaps = 103/652 (15%)
Query: 129 FSIVLKACSELRDV-VQAAR-LHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDE 185
++ L+ C LR +Q AR +H ++I G +LN L+D Y K + AR++FDE
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 186 IAE---------------------------------RNVVSWTSMFVAYVQNDCAVEGLR 212
I+E R+ V + +M + N+ +
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 213 LFNRMR-EGFVDGNDFTVGSLVTACTKLGS-LHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
LF +M+ EGF N FT S++ + Q H +KSG + ++ +L+++
Sbjct: 135 LFCKMKHEGFKPDN-FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 271 YVKCGD----IGDARKVFDEMLTSD----------------------------DELDLVS 298
Y KC + ARKVFDE+L D D + LV+
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 299 WTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
+ AMI GY RG +ALE+ +GI + +G +H V+
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 359 ------------------KCGLFDNT-------PVR-----NALIDMYAKCHLVSDARYV 388
KCG FD P + NAL+ Y + +A+ +
Sbjct: 314 RREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 389 FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA 448
F+ +K+++SW ISG A++G E L++F M+ E F P D G + +CA LGA
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD-YAFSGAIKSCAVLGA 432
Query: 449 LPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMIS 508
G HA LK G S S+ G AL+ YAKCG + AR VF M ++V+W+A+I+
Sbjct: 433 YCNGQQYHAQLLKIGFDS-SLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 509 GYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
G G G ++ ++ +MLK+ P+ + +VL ACSH+G+V +G + F M
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 569 PSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRR 628
P HYA ++DLL R+G +A I+ +P +P ++ A L GC +H ELG +A +
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 629 MLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+ L P+ Y+L+SN++A+ G+W V +VR++++ RG+ K CS +E++
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEME 663
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 153/385 (39%), Gaps = 41/385 (10%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSP-NLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLG 121
T +++ Y G+ L + + L ++ AM+ Y + + + + G
Sbjct: 223 TTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRM-VSSG 281
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKC-------- 173
D + V++AC+ + ++H +V++ N LV Y KC
Sbjct: 282 IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARA 341
Query: 174 -----------------------GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEG 210
GH+ A+ +F E+ E+N++SW M +N EG
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 211 LRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLN 269
L+LF+ M REGF + D+ + +C LG+ G+ H ++K G + +L+
Sbjct: 402 LKLFSCMKREGF-EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 270 MYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILP 329
MY KCG + +AR+VF M LD VSW A+I Q GH +A++++ + GI P
Sbjct: 461 MYAKCGVVEEARQVFRTMPC----LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRP 516
Query: 330 NXXXXXXXXXXXXXXXXXXMG-MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYV 388
+ G + + LID+ + SDA V
Sbjct: 517 DRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESV 576
Query: 389 FETTVQKDVVS-WNSFISGCAQSGS 412
E+ K W + +SGC G+
Sbjct: 577 IESLPFKPTAEIWEALLSGCRVHGN 601
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWY 100
C D + + LLS Y S G + A+ +F + N+ S+ M+
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392
Query: 101 FLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDG 160
N + + + + GF FS +K+C+ L + H ++K G
Sbjct: 393 AENGFGEEGLKLFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 161 FVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE 219
N L+ Y+KCG V AR+VF + + VSW ++ A Q+ E + ++ M +
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 220 GFVDGNDFTVGSLVTACTKLGSLHQG-KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
+ + T+ +++TAC+ G + QG K+ I + L+++ + G
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 279 DARKVFDEM 287
DA V + +
Sbjct: 572 DAESVIESL 580
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 272 bits (696), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 248/480 (51%), Gaps = 30/480 (6%)
Query: 228 TVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
T +L+ C++ +L +GK VH ++ SG + LL MY KCG + DARKVFDEM
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 288 LTSD------------------------DEL---DLVSWTAMIVGYSQRGHPLKALELFT 320
D DE+ D SWTAM+ GY ++ P +AL L++
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 321 -DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKC 379
+ PN G +HG +V+ GL + + ++L+DMY KC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 380 HLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGV 439
+ +AR +F+ V+KDVVSW S I +S E +F + S P+ T GV
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGV 325
Query: 440 LSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN 499
L+ACA L LG +H + + G S + ++L++ Y KCG+ +SA+ V DG + +
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYS-FASSSLVDMYTKCGNIESAKHVVDGCPKPD 384
Query: 500 AVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFH 559
V+W+++I G G ++ F +LK +P+ V F +VL+AC+H+G+V +G F+
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 560 MMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEF 619
+ + + HY C+VDLLAR+G ++ I +MP++P ++ + L GC +
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 620 ELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
+L E A + + ++ P+ YV ++N+YA+ G+W ++R+ +++ G+ K PG S EI
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 224/465 (48%), Gaps = 42/465 (9%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFD------ 184
+++ CS+ R + + ++H H+ SG G V+ N L+ Y+KCG + ARKVFD
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRD 150
Query: 185 -------------------------EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-R 218
E+ E++ SWT+M YV+ D E L L++ M R
Sbjct: 151 LCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR 210
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
N FTV V A + + +GK +HG++V++G+ + L +SL++MY KCG I
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID 270
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXX 338
+AR +FD+++ E D+VSWT+MI Y + + LF++ + PN
Sbjct: 271 EARNIFDKIV----EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 339 XXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVV 398
+G +HG + + G + ++L+DMY KC + A++V + + D+V
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 399 SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS-IHA 457
SW S I GCAQ+G EAL+ F + +S + PD VT V VLSAC G + G ++
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLL-KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGDG 516
K L S + T L++ A+ G + + V M K + W++++ G G+
Sbjct: 446 ITEKHRLSHTSDHY-TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
+ +++ K E E N V + ++ + +G E ++ M
Sbjct: 505 DLAEEAAQELFKIEPE-NPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 187/382 (48%), Gaps = 8/382 (2%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
+++ YA G L AR+LFD + + +S+ AM+ Y + + + Y L +
Sbjct: 157 MVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVF 183
++ SI + A + ++ + + +H H++++G SD + + L+D Y KCG + AR +F
Sbjct: 217 NIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
D+I E++VVSWTSM Y ++ EG LF+ + N++T ++ AC L +
Sbjct: 277 DKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE 336
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
GK VHGY+ + G SF ++SL++MY KCG+I A+ V D + DLVSWT++I
Sbjct: 337 LGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC----PKPDLVSWTSLI 392
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM-LLHGLVVKCGL 362
G +Q G P +AL+ F +G P+ G+ + + K L
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 363 FDNTPVRNALIDMYAKCHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
+ L+D+ A+ + V E ++ W S + GC+ G+ A E Q
Sbjct: 453 SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 422 RM-RSESFSPPDAVTVVGVLSA 442
+ + E +P VT+ + +A
Sbjct: 513 ELFKIEPENPVTYVTMANIYAA 534
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 131/287 (45%), Gaps = 32/287 (11%)
Query: 42 KNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAML 97
K I K+ H ++ G D + L+ +Y G + AR +FD + ++ S+ +M+
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI 291
Query: 98 RWYFLNNLHSDVVSFYHLTRYTLGF--FHDLV---------VFSIVLKACSELRDVVQAA 146
YF + +R+ GF F +LV F+ VL AC++L
Sbjct: 292 DRYFKS------------SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGK 339
Query: 147 RLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
++H ++ + G F + LVD Y+KCG++ SA+ V D + ++VSWTS+ QN
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399
Query: 206 CAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG-KWVHGYVVKSGIHVNSFLA 264
E L+ F+ + + + T ++++ACT G + +G ++ + K + S
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY 459
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
T L+++ + G + V EM + W +++ G S G+
Sbjct: 460 TCLVDLLARSGRFEQLKSVISEMPMKPSKF---LWASVLGGCSTYGN 503
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 106/235 (45%), Gaps = 12/235 (5%)
Query: 373 IDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPD 432
ID+ L+ +A + + ++ + I C+Q+ + E ++ + +R+ F P
Sbjct: 61 IDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGI 120
Query: 433 AV--TVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
+ ++ + + C SL + A + D + + + ++N YA+ G + AR
Sbjct: 121 VIWNRLLRMYAKCGSL--------VDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARK 172
Query: 491 VFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK-EECEPNEVVFTSVLAACSHSG 549
+FD M EK++ +W+AM++GY + ++ L+ M + PN + +AA +
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
+ G + + R ++ ++D+ + G + EA + DK+ + VS
Sbjct: 233 CIRRGKEIHGHIVR-AGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 166/516 (32%), Positives = 268/516 (51%), Gaps = 17/516 (3%)
Query: 166 LVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGN 225
++ Y++ + A +FDE+ R+VVSW SM V+ ++LF+ M E V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128
Query: 226 DFTVGSLVTACTKLGSLHQG-KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVF 284
+ ++V C + G + Q + + VK NS +++ Y++ G + DA K+F
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNS-----MVHGYLQFGKVDDALKLF 182
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXX 344
+M + ++SWT MI G Q +AL+LF + I
Sbjct: 183 KQMPGKN----VISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 345 XXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFI 404
MG+ +HGL++K G V +LI YA C + D+R VF+ V + V W + +
Sbjct: 239 PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALL 298
Query: 405 SGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL 464
SG + + +AL +F M S P + G L++C++LG L G +H A+K GL
Sbjct: 299 SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG-LNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 465 VSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFR 524
+ +VG +L+ Y+ G+ A VF + +K+ V+W+++I G G G + +F
Sbjct: 358 ET-DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 525 DMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVP-SMKHYACMVDLLAR 583
M++ EP+E+ FT +L+ACSH G + +G +LF+ M +N + ++HY CMVD+L R
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 584 AGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLV 643
G LKEA + I++M V+P V+ A L C +HS+ + GE A + L + YVL+
Sbjct: 477 CGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLL 536
Query: 644 SNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
SN+YAS GRW V ++R +K+ G+ K PG S V I
Sbjct: 537 SNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVI 572
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 213/457 (46%), Gaps = 19/457 (4%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYF-LNNLHSDVVSFYHLTRYTLG 121
TK+++ Y L A LFD +P ++ S+ +M+ ++++ V F + ++
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV- 128
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARK 181
V ++ ++ C V QA RL + D N +V Y + G V A K
Sbjct: 129 -----VSWTAMVNGCFRSGKVDQAERL---FYQMPVKDTAAWNSMVHGYLQFGKVDDALK 180
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
+F ++ +NV+SWT+M QN+ + E L LF M + ++TAC +
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
H G VHG ++K G +++ SL+ Y C IGD+RKVFDE + + WTA
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE----QVAVWTA 296
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
++ GYS AL +F+ ILPN G +HG+ VK G
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG 356
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
L + V N+L+ MY+ V+DA VF +K +VSWNS I GCAQ G A +F
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL--VSCSIYVGTALLNFY 479
+M + PD +T G+LSAC+ G L G + + + G+ + I T +++
Sbjct: 417 QMIRLN-KEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDIL 474
Query: 480 AKCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGD 515
+CG K A + + M K N + W A++S M D
Sbjct: 475 GRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSD 511
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 47/305 (15%)
Query: 369 RNALIDMYAKCHLVSDARYVFETTVQ-------------------------------KDV 397
R LI + + +AR VF +DV
Sbjct: 38 REVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV 97
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI-H 456
VSWNS ISGC + G A+++F M S V+ +++ C G + + +
Sbjct: 98 VSWNSMISGCVECGDMNTAVKLFDEMPERS-----VVSWTAMVNGCFRSGKVDQAERLFY 152
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDG 516
+KD S+ G Y + G A +F M KN ++W+ MI G
Sbjct: 153 QMPVKDTAAWNSMVHG------YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC 576
++ LF++ML+ + FT V+ AC+++ G ++ H + +L F+ A
Sbjct: 207 GEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV-HGLIIKLGFLYEEYVSAS 265
Query: 577 MVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHP 634
++ A + ++ D+ V V+V+ A L G L+ + E ML + P
Sbjct: 266 LITFYANCKRIGDSRKVFDE-KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP 324
Query: 635 DQACY 639
+Q+ +
Sbjct: 325 NQSTF 329
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 178/611 (29%), Positives = 291/611 (47%), Gaps = 60/611 (9%)
Query: 80 RLFDHLPSPNLHSFKAMLRWYF--LNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACS 137
++F + +LH ++ Y N+HS V +HL ++ ++K CS
Sbjct: 725 QIFQPKATNSLHLYRQSQILYMNAFANVHSLRVPSHHLRDFSASLSLAPPNLKKIIKQCS 784
Query: 138 ELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSM 197
+ + A L + S D ++N + A + + A ++ E NV + ++
Sbjct: 785 TPKLLESA--LAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNAL 842
Query: 198 FVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA---CTKLG-SLHQGKWVHGYVV 253
F +V + L L+ RM V + +T SLV A ++ G SL W G+
Sbjct: 843 FKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGF-- 900
Query: 254 KSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPL 313
G HV + T+L++ Y G I +ARKVFDEM DD ++WT M+ Y +
Sbjct: 901 --GFHVK--IQTTLIDFYSATGRIREARKVFDEMPERDD----IAWTTMVSAYRR----- 947
Query: 314 KALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALI 373
D + A L N N N LI
Sbjct: 948 -----VLDMDSANSLANQMSE-----------------------------KNEATSNCLI 973
Query: 374 DMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDA 433
+ Y + A +F KD++SW + I G +Q+ EA+ +F +M E PD
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI-IPDE 1032
Query: 434 VTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD 493
VT+ V+SACA LG L +G +H + L++G V +Y+G+AL++ Y+KCG + A +VF
Sbjct: 1033 VTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-LDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 494 GMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGE 553
+ +KN W+++I G G ++ +F M E +PN V F SV AC+H+G+V E
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 554 GSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGC 613
G R++ M + + V +++HY MV L ++AG + EAL+ I M +P ++GA L GC
Sbjct: 1152 GRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGC 1211
Query: 614 GLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKV-P 672
+H + E+A +++ L P + YY L+ ++YA RW V ++R +++ G+ K+ P
Sbjct: 1212 RIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICP 1271
Query: 673 GCSLVEIDLND 683
G S + ID D
Sbjct: 1272 GTSSIRIDKRD 1282
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 8/244 (3%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS-FYHLTRYTLGFF 123
L++ Y G L A LF+ +P ++ S+ M++ Y N + + ++ FY + G
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE--GII 1029
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKV 182
D V S V+ AC+ L + +H + +++G D ++ + LVD YSKCG + A V
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 183 FDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL 242
F + ++N+ W S+ + A E L++F +M V N T S+ TACT G +
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 1149
Query: 243 HQGKWVHGYVVKS-GIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
+G+ ++ ++ I N +++++ K G I +A ++ M + E + V W A
Sbjct: 1150 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWGA 1206
Query: 302 MIVG 305
++ G
Sbjct: 1207 LLDG 1210
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 271 bits (694), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 295/565 (52%), Gaps = 28/565 (4%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGP---SDGFVL-NGLVDAYSKCGHVCSARKVFD 184
++ + +AC+E R+++ LH H++ S P S +L N L++ Y+KCG++ AR+VFD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHML-SHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 185 EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQ 244
+ ERNVVSWT++ YVQ EG LF+ M N+FT+ S++T+C
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP-NEFTLSSVLTSC----RYEP 175
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
GK VHG +K G+H + ++A ++++MY +C D A + + + + +LV+W +MI
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWT-VFEAIKFKNLVTWNSMIA 234
Query: 305 GYSQRGHPLKALELFTDRNWAGI------LPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
+ KA+ +F + G+ L N + LH L V
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTV 294
Query: 359 KCGLFDNTPVRNALIDMYAK-CHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEA 416
K GL T V ALI +Y++ +D +F E + +D+V+WN I+ A A
Sbjct: 295 KSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE-RA 353
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
+ +F ++R E SP D T VL ACA L SIHA +K G ++ ++ + +L+
Sbjct: 354 IHLFGQLRQEKLSP-DWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV-LNNSLI 411
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
+ YAKCG VFD M ++ V+W++M+ Y + G + +F+ M + P+
Sbjct: 412 HAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSA 468
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
F ++L+ACSH+G V EG R+F M + +P + HYAC++D+L+RA EA + I +
Sbjct: 469 TFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQ 528
Query: 597 MPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLEL-HPDQACYYVLVSNLYASDGRWGM 655
MP+ P V+ A L C H LG++A ++ EL P + Y+ +SN+Y ++G +
Sbjct: 529 MPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNE 588
Query: 656 VK-QVREMIKQRGLNKVPGCSLVEI 679
++EM R + K P S EI
Sbjct: 589 ANLSIKEMETWR-VRKEPDLSWTEI 612
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 216/495 (43%), Gaps = 55/495 (11%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYF-LNNLHSDVVSFYHLTRYTLGFF 123
L+++YA G + +AR++FD +P N+ S+ A++ Y N F + + F
Sbjct: 102 LINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHC---F 158
Query: 124 HDLVVFSIVLKAC-----SELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCS 178
+ S VL +C ++ + LHC + +V N ++ Y +C +
Sbjct: 159 PNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSI--------YVANAVISMYGRCHDGAA 210
Query: 179 ARK---VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA 235
A + VF+ I +N+V+W SM A+ + + + +F RM DG F +L+
Sbjct: 211 AYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHS---DGVGFDRATLLNI 267
Query: 236 CTKLGSLHQGK------------WVHGYVVKSGIHVNSFLATSLLNMYVK-CGDIGDARK 282
C+ SL++ +H VKSG+ + +AT+L+ +Y + D D K
Sbjct: 268 CS---SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYK 324
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
+F EM D+V+W +I ++ P +A+ LF + P+
Sbjct: 325 LFMEMSHCR---DIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACA 380
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
+ +H V+K G +T + N+LI YAKC + VF+ +DVVSWNS
Sbjct: 381 GLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNS 440
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI--HAFAL 460
+ + G L +FQ+M PD+ T + +LSAC+ G + G I F
Sbjct: 441 MLKAYSLHGQVDSILPVFQKMDIN----PDSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Query: 461 KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGDG-VG 518
+ L + Y +++ ++ A V M + +AV W A++ G+ +G
Sbjct: 497 PETLPQLNHY--ACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554
Query: 519 SIALFRDMLKEECEP 533
+A D LKE EP
Sbjct: 555 KLAA--DKLKELVEP 567
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/666 (27%), Positives = 306/666 (45%), Gaps = 43/666 (6%)
Query: 41 CKNIDTVKK---FHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSF 93
C + K+ A +I G + ++S+Y F L A ++FD + N+ ++
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 94 KAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVI 153
M+ Y + + + Y + + ++S VLKAC + D+ ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 154 KSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR 212
K D ++N +VD Y K G + A F EI + SW ++ Y + E +
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 213 LFNRMRE-----------GFVDG-------------------NDFTVGSLVTACTKLGSL 242
LF+RM + GFVD + F + + AC+ G L
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVF-DEMLTSDDELDLVSWTA 301
GK +H VVKSG+ + F ++L++MY CG + A VF E L + + + W +
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV--WNS 312
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
M+ G+ AL L + + + +G+ +H LVV G
Sbjct: 313 MLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSG 372
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
+ V + L+D++A + DA +F KD+++++ I GC +SG A +F+
Sbjct: 373 YELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFR 432
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
+ D V +L C+SL +L G IH +K G S + TAL++ Y K
Sbjct: 433 ELIKLGLDA-DQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV-TATALVDMYVK 490
Query: 482 CGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
CG+ + ++FDGM E++ V+W+ +I G+G G + F M+ EPN+V F +
Sbjct: 491 CGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGL 550
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQP 601
L+AC HSG++ E M E P ++HY C+VDLL +AG +EA + I+KMP++P
Sbjct: 551 LSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEP 610
Query: 602 GVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVRE 661
+++ + L CG H L V ++L+ PD Y +SN YA+ G W + +VRE
Sbjct: 611 DKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE 670
Query: 662 MIKQRG 667
K+ G
Sbjct: 671 AAKKLG 676
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 257/574 (44%), Gaps = 43/574 (7%)
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSARKVF 183
DL + + L+ C +++ + + HVIK G S F+ N ++ Y + A KVF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD-GNDFTVGSLVTACTKLGSL 242
DE++ERN+V+WT+M Y + + + L+ RM + + N+F +++ AC +G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEML----TSDDEL---- 294
G V+ + K + + L S+++MYVK G + +A F E+L TS + L
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 295 -------------------DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXX 335
++VSW +I G+ +G P +ALE G++ +
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALP 242
Query: 336 XXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF---ETT 392
MG LH VVK GL + +ALIDMY+ C + A VF +
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 393 VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
V V WNS +SG + AL + ++ D+ T+ G L C + L LG
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC-FDSYTLSGALKICINYVNLRLG 361
Query: 453 SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGM 512
+H+ + G VG+ L++ +A G+ + A +F + K+ + +S +I G
Sbjct: 362 LQVHSLVVVSGY-ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Query: 513 QGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMK 572
G + LFR+++K + ++ + +++L CS +G G ++ H +C + +
Sbjct: 421 SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQI-HGLCIKKGYESEPV 479
Query: 573 HYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE- 631
+VD+ + G + + D M + VS G + G G + E +M+
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIV-GFGQNGRVEEAFRYFHKMINI 538
Query: 632 -LHPDQACYYVLVSNLYASDGRWGMVKQVREMIK 664
+ P++ + L+S S G++++ R ++
Sbjct: 539 GIEPNKVTFLGLLSACRHS----GLLEEARSTLE 568
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 217/487 (44%), Gaps = 55/487 (11%)
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
C K+ + +G+ + +V+K GI N F+A ++++MYV + DA KVFDEM E +
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM----SERN 70
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDR-NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
+V+WT M+ GY+ G P KA+EL+ + N +G+L++
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
+ K L + + N+++DMY K + +A F+ ++ SWN+ ISG ++G
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 415 EALEMFQRMRSESF--------------SPP---------------DAVTVVGVLSACAS 445
EA+ +F RM + SP D + L AC+
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 446 LGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVT--- 502
G L +G +H +K GL S S + +AL++ Y+ CG A VF EK AV
Sbjct: 251 GGLLTMGKQLHCCVVKSGLES-SPFAISALIDMYSNCGSLIYAADVFH--QEKLAVNSSV 307
Query: 503 --WSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
W++M+SG+ + + ++ L + + + + + L C + + G ++ +
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSL 367
Query: 561 MC---RELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHS 617
+ EL+++ + +VDL A GN+++A ++P + F + GC
Sbjct: 368 VVVSGYELDYIVG----SILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSG 422
Query: 618 EFELGEVAIRRMLELHPDQACYYVLVSNLY---ASDGRWGMVKQVREMIKQRGLNKVPGC 674
L R +++L D + +VSN+ +S G KQ+ + ++G P
Sbjct: 423 FNSLAFYLFRELIKLGLDADQF--IVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT 480
Query: 675 SLVEIDL 681
+ +D+
Sbjct: 481 ATALVDM 487
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 254/484 (52%), Gaps = 19/484 (3%)
Query: 208 VEGLRLFNRMREGFVDGN------DFTVG-----SLVTACTKLGSLHQGKWVHGYVVKSG 256
+E L L NR RE F F VG +LV AC +L S+ K V+G+++ +G
Sbjct: 94 IEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNG 153
Query: 257 IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKAL 316
++ +L M+VKCG I DAR++FDE+ E +L S+ ++I G+ G+ ++A
Sbjct: 154 FEPEQYMMNRILLMHVKCGMIIDARRLFDEI----PERNLYSYYSIISGFVNFGNYVEAF 209
Query: 317 ELFTDRNWAGILP-NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDM 375
ELF W + +G LH +K G+ DNT V LIDM
Sbjct: 210 ELFK-MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM 268
Query: 376 YAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVT 435
Y+KC + DAR FE +K V+WN+ I+G A G + EAL + MR S D T
Sbjct: 269 YSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSI-DQFT 327
Query: 436 VVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM 495
+ ++ L L L HA +++G S I TAL++FY+K G +AR VFD +
Sbjct: 328 LSIMIRISTKLAKLELTKQAHASLIRNGFES-EIVANTALVDFYSKWGRVDTARYVFDKL 386
Query: 496 GEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGS 555
KN ++W+A++ GY G G ++ LF M+ PN V F +VL+AC++SG+ +G
Sbjct: 387 PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 556 RLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGL 615
+F M P HYACM++LL R G L EA+ FI + P++ V+++ A L+ C +
Sbjct: 447 EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRM 506
Query: 616 HSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCS 675
ELG V ++ + P++ YV++ N+Y S G+ V E ++ +GL+ +P C+
Sbjct: 507 QENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACT 566
Query: 676 LVEI 679
VE+
Sbjct: 567 WVEV 570
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 177/355 (49%), Gaps = 6/355 (1%)
Query: 102 LNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDG 160
L N + + + F + + +++AC L+ + R++ ++ +G +
Sbjct: 99 LCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQ 158
Query: 161 FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREG 220
+++N ++ + KCG + AR++FDEI ERN+ S+ S+ +V VE LF M E
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE 218
Query: 221 FVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDA 280
D T ++ A LGS++ GK +H +K G+ N+F++ L++MY KCGDI DA
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX 340
R F+ M E V+W +I GY+ G+ +AL L D +G+ +
Sbjct: 279 RCAFECM----PEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRI 334
Query: 341 XXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSW 400
+ H +++ G AL+D Y+K V ARYVF+ +K+++SW
Sbjct: 335 STKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISW 394
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
N+ + G A G +A+++F++M + + + P+ VT + VLSACA G G I
Sbjct: 395 NALMGGYANHGRGTDAVKLFEKMIAANVA-PNHVTFLAVLSACAYSGLSEQGWEI 448
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 42 KNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAML 97
K+I VK+ + ++ +GF + ++L ++ G + ARRLFD +P NL+S+ +++
Sbjct: 137 KSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSII 196
Query: 98 RWYFLNNLHSDVVSFYHLTRYTLGFFHDLV--VFSIVLKACSELRDVVQAARLHCHVIKS 155
F+N + V + L + D F+++L+A + L + +LH +K
Sbjct: 197 SG-FVN--FGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKL 253
Query: 156 GPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLF 214
G D FV GL+D YSKCG + AR F+ + E+ V+W ++ Y + + E L L
Sbjct: 254 GVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLL 313
Query: 215 NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC 274
MR+ V + FT+ ++ TKL L K H ++++G T+L++ Y K
Sbjct: 314 YDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKW 373
Query: 275 GDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
G + AR VFD++ +++SW A++ GY+ G A++LF A + PN
Sbjct: 374 GRVDTARYVFDKLPRK----NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPN 425
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 6/227 (2%)
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
+T + K V+ S I EA E+F+ + T ++ AC L ++
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISG 509
++ F + +G Y+ +L + KCG AR +FD + E+N ++ ++ISG
Sbjct: 140 RCVKRVYGFMMSNGF-EPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISG 198
Query: 510 YGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVP 569
+ G+ V + LF+ M +E + F +L A + G + G +L H+ +L V
Sbjct: 199 FVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQL-HVCALKLGVVD 257
Query: 570 SMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS----VFGAYLHG 612
+ ++D+ ++ G++++A + MP + V+ + G LHG
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 261/509 (51%), Gaps = 38/509 (7%)
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLG 240
VF+ + W + Y E + + RM R G +++T ++ C+ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
+ G VHG V++ G + + TS ++ Y KC D+ ARKVF EM E + VSWT
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEM----PERNAVSWT 180
Query: 301 AMIVGYSQRGHPLKA---LELFTDRN---WAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
A++V Y + G +A +L +RN W ++ G++
Sbjct: 181 ALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVD--------------------GLVKS 220
Query: 355 G-LVVKCGLFDNTPVRN-----ALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCA 408
G LV LFD P R+ ++ID YAK + AR +FE DV +W++ I G A
Sbjct: 221 GDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
Q+G EA ++F M +++ P D +VG++SAC+ +G L + ++ + S
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKP-DEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSS 339
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
YV AL++ AKCG A +F+ M +++ V++ +M+ G + G G +I LF M+
Sbjct: 340 HYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
E P+EV FT +L C S +V EG R F +M ++ + + S HY+C+V+LL+R G LK
Sbjct: 400 EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLK 459
Query: 589 EALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYA 648
EA + I MP + S +G+ L GC LH E+ EV R + EL P A YVL+SN+YA
Sbjct: 460 EAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYA 519
Query: 649 SDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
+ RW V +R+ + + G+ K+ G S +
Sbjct: 520 ALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 240/534 (44%), Gaps = 36/534 (6%)
Query: 29 LPHPPTLYLS---PICKNIDTVKKFHASLIVHGFPGDTKLL-----SLYASFGFLRHARR 80
L HP L L +CK+ + + HA +I G D L+ S +S L ++
Sbjct: 5 LSHPSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSS 64
Query: 81 LFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELR 140
+F+ +PSP + + +++ Y L + VS T D F +V+K CS
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 141 DVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFV 199
V + +H V++ G D V VD Y KC + SARKVF E+ ERN VSWT++ V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 200 AYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHV 259
AYV++ E +F+ M E N + +LV K G L K + + K I
Sbjct: 185 AYVKSGELEEAKSMFDLMPE----RNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI-- 238
Query: 260 NSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF 319
TS+++ Y K GD+ AR +F+E +D+ +W+A+I+GY+Q G P +A ++F
Sbjct: 239 --ISYTSMIDGYAKGGDMVSARDLFEEARG----VDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 320 TDRNWAGILPNXXXXXXXXXXXXX----XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDM 375
++ + P+ + LH + K F + V ALIDM
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNK---FSSHYVVPALIDM 349
Query: 376 YAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVT 435
AKC + A +FE Q+D+VS+ S + G A G EA+ +F++M E PD V
Sbjct: 350 NAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIV-PDEVA 408
Query: 436 VVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM 495
+L C + G K + S + ++N ++ G K A + M
Sbjct: 409 FTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM 468
Query: 496 G-EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNE----VVFTSVLAA 544
E +A W +++ G + G+ + + R + E EP V+ +++ AA
Sbjct: 469 PFEAHASAWGSLLGGCSLHGNTEIAEVVARHLF--ELEPQSAGSYVLLSNIYAA 520
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 186/696 (26%), Positives = 318/696 (45%), Gaps = 51/696 (7%)
Query: 10 HSSKSLIQFRSLSSYIAFTLPHPPTLYLSPI---CKNIDTV---KKFHASLIVHGFPGD- 62
H KSL F+S++ + T+ S + C +I+ + + H +I G+ +
Sbjct: 269 HPRKSLQYFKSMTG----SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 63 -----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTR 117
++S+Y+ G A +F+ L ++ S A+L + N + + + +
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 118 YTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF--VLNGLVDAYSKCGH 175
D+ + C +L + +H + ++ V+N ++D Y KCG
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDF---TVGSL 232
A +F R++VSW SM A+ QN + LF + + + F TV ++
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY-SCSKFSLSTVLAI 503
Query: 233 VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD 292
+T+C SL GK VH ++ K +GD F + T +
Sbjct: 504 LTSCDSSDSLIFGKSVHCWLQK----------------------LGDLTSAFLRLETMSE 541
Query: 293 ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG-ILPNXXXXXXXXXXXXXXXXXXMGM 351
DL SW ++I G + GH L++L F + G I + G
Sbjct: 542 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG 411
HGL +K +T ++N LI MY +C + A VF ++ SWN IS +Q+
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNK 661
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYV 471
+ E ++F+ ++ E P+ +T VG+LSA LG+ G H ++ G + +V
Sbjct: 662 AGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGF-QANPFV 716
Query: 472 GTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML-KEE 530
AL++ Y+ CG ++ VF G + W+++IS +G G G ++ LF+++ E
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 531 CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA 590
EPN+ F S+L+ACSHSG + EG + M + P +H +VD+L RAG L+EA
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 591 LDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASD 650
+FI + V+GA L C H + +LG+ + E+ PD A YY+ ++N Y
Sbjct: 837 YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGL 896
Query: 651 GRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYS 686
G W ++R+M++ L K+PG S++++ DT S
Sbjct: 897 GGWEEAVRLRKMVEDNALKKLPGYSVIDVRCLDTVS 932
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 160/664 (24%), Positives = 291/664 (43%), Gaps = 79/664 (11%)
Query: 55 IVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYH 114
++ +KLL+ Y G L + LFD L ++ + +M+ N + V +
Sbjct: 118 LLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLF- 176
Query: 115 LTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKC 173
+ G D + A S L + + LHC I++G D + N L++ Y+K
Sbjct: 177 IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236
Query: 174 GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
++ SA VF + R++VSW ++ + N + L+ F M + + T ++
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 234 TACTKLGSLHQGKWVHGYVVKSG----IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
+AC+ + L G+ +HG V+KSG HV+ + S+++MY KCGD A VF+E++
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVS--VGNSIISMYSKCGDTEAAETVFEELVC 354
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTD-RNWAGILPNXXXXXXXXXXXXXXXXXX 348
D++S A++ G++ G +A + ++ I P+
Sbjct: 355 R----DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSR 410
Query: 349 MGMLLHGLVVKCGLFDNT-PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGC 407
G +HG V+ + V N++IDMY KC L + A +F+TT +D+VSWNS IS
Sbjct: 411 EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAF 470
Query: 408 AQSGSAYEALEMFQRMRSE-SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
+Q+G ++A +F+ + SE S S TV+ +L++C S +L G S+H
Sbjct: 471 SQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC--------- 521
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGE-KNAVTWSAMISGYGMQGDGVGSIALFRD 525
+ K GD SA + + M E ++ +W+++ISG G + S+ F+
Sbjct: 522 -----------WLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQA 570
Query: 526 MLKE-ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMC----RELNFV------------ 568
M +E + + + ++A + G+V +G R FH + REL+
Sbjct: 571 MSREGKIRHDLITLLGTISASGNLGLVLQG-RCFHGLAIKSLRELDTQLQNTLITMYGRC 629
Query: 569 ---------------PSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGC 613
P++ + C++ L++ +E + ++P F L
Sbjct: 630 KDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSAS 689
Query: 614 GLHSEFELGEVA----IRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLN 669
G A IRR + +P + V ++Y+S GM++ ++ + G+N
Sbjct: 690 TQLGSTSYGMQAHCHLIRRGFQANPFVSAALV---DMYSS---CGMLETGMKVFRNSGVN 743
Query: 670 KVPG 673
+
Sbjct: 744 SISA 747
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 152/331 (45%), Gaps = 19/331 (5%)
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS 412
+H +KCGL + + L+ Y + + + +F+ +KDV+ WNS I+ Q+G
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 413 AYEALEMFQRM--RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIY 470
A+ +F M + F D+ T++ SA +SL S +H A++ GLV S
Sbjct: 169 YIAAVGLFIEMIHKGNEF---DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS-S 224
Query: 471 VGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE 530
+ AL+N YAK + SA VF M ++ V+W+ +++ G S+ F+ M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 531 CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYA---CMVDLLARAGNL 587
E + V F+ V++ACS + G L H + + + P H + ++ + ++ G+
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESL-HGLVIKSGYSPE-AHVSVGNSIISMYSKCGDT 342
Query: 588 KEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRML---ELHPDQACYYVLVS 644
+ A +++ + +S A L+G + FE + +M ++ PD A + S
Sbjct: 343 EAAETVFEELVCRDVISS-NAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITS 401
Query: 645 NL----YASDGRWGMVKQVREMIKQRGLNKV 671
++ +GR VR ++ R L +
Sbjct: 402 ICGDLSFSREGRAVHGYTVRMEMQSRALEVI 432
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 454 SIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQ 513
S+H FALK GL+ + + LL FY + G+ S+ +FD + EK+ + W++MI+
Sbjct: 108 SVHCFALKCGLLQ-DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 514 GDGVGSIALFRDML 527
G + ++ LF +M+
Sbjct: 167 GRYIAAVGLFIEMI 180
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 240/463 (51%), Gaps = 8/463 (1%)
Query: 218 REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDI 277
+ FV D V SL+ A S+ + +H VVKS + + F+ L+ Y++ G
Sbjct: 23 QSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD 82
Query: 278 GDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR--NWAGILPNXXXXX 335
A K+FDEM E DLVSW ++I GYS RG+ K E+ + + G PN
Sbjct: 83 VCAEKLFDEM----PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFL 138
Query: 336 XXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK 395
G +HGLV+K G+ + V NA I+ Y K ++ + +FE K
Sbjct: 139 SMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
Query: 396 DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
++VSWN+ I Q+G A + L F M PD T + VL +C +G + L I
Sbjct: 199 NLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGI 257
Query: 456 HAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGD 515
H + G S + + TALL+ Y+K G + + VF + +++ W+AM++ Y G
Sbjct: 258 HGLIMFGGF-SGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGF 316
Query: 516 GVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYA 575
G +I F M+ P+ V FT +L ACSHSG+V EG F M + P + HY+
Sbjct: 317 GRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYS 376
Query: 576 CMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPD 635
CMVDLL R+G L++A I +MP++P V+GA L C ++ + +LG A R+ EL P
Sbjct: 377 CMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR 436
Query: 636 QACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
YV++SN+Y++ G W ++R ++KQ+GL + GCS +E
Sbjct: 437 DGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 18/300 (6%)
Query: 41 CKNIDTVKKFHASLIV-----HGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKA 95
C +I+ + H ++ HGF GD +L+ Y G A +LFD +P +L S+ +
Sbjct: 44 CVSIELCRLLHCKVVKSVSYRHGFIGD-QLVGCYLRLGHDVCAEKLFDEMPERDLVSWNS 102
Query: 96 MLRWY----FLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCH 151
++ Y +L +V+S ++ +GF + V F ++ AC + +H
Sbjct: 103 LISGYSGRGYLGKCF-EVLSRMMISE--VGFRPNEVTFLSMISACVYGGSKEEGRCIHGL 159
Query: 152 VIKSGPSDGF-VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEG 210
V+K G + V+N ++ Y K G + S+ K+F++++ +N+VSW +M V ++QN A +G
Sbjct: 160 VMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKG 219
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
L FN R + + T +++ +C +G + + +HG ++ G N + T+LL++
Sbjct: 220 LAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDL 279
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y K G + D+ VF E+ + D ++WTAM+ Y+ G A++ F GI P+
Sbjct: 280 YSKLGRLEDSSTVFHEITSPDS----MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPD 335
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
++ Y G L + +LF+ L NL S+ M+ + N L +++++++R +G
Sbjct: 175 FINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSR-RVGHEP 233
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVF 183
D F VL++C ++ V A +H ++ G S + + L+D YSK G + + VF
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
EI + ++WT+M AY + + ++ F M + + T L+ AC+ G +
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 244 QGK 246
+GK
Sbjct: 354 EGK 356
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 246/505 (48%), Gaps = 43/505 (8%)
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD--A 280
+ + V SL++ +L+Q K +HG+V++ G+ + ++ T L+ K G D A
Sbjct: 43 NQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYA 102
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX 340
R+V + + + L WTA+I GY+ G +A+ ++ I P
Sbjct: 103 RRVIEPVQFRNPFL----WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKA 158
Query: 341 XXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSW 400
+G H + F V N +IDMY KC + AR VF+ ++DV+SW
Sbjct: 159 CGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISW 218
Query: 401 NSFI-------------------------------SGCAQSGSAYEALEMFQRMRSESFS 429
I +G AQ+ EALE F RM
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 430 PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLV-SCSIYVGTALLNFYAKCGDAKSA 488
D VTV G +SACA LGA A K G S + +G+AL++ Y+KCG+ + A
Sbjct: 279 A-DEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEA 337
Query: 489 RMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE-ECEPNEVVFTSVLAACSH 547
VF M KN T+S+MI G G ++ LF M+ + E +PN V F L ACSH
Sbjct: 338 VNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSH 397
Query: 548 SGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFG 607
SG+V +G ++F M + P+ HY CMVDLL R G L+EAL+ I M V+P V+G
Sbjct: 398 SGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWG 457
Query: 608 AYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRG 667
A L C +H+ E+ E+A + EL PD Y+L+SN+YAS G WG V +VR++IK++G
Sbjct: 458 ALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKG 517
Query: 668 LNKVPGCSLVEIDLNDTYSKVTIFP 692
L K P S V +D N K FP
Sbjct: 518 LKKTPAVSWV-VDKNGQMHK--FFP 539
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 208/519 (40%), Gaps = 107/519 (20%)
Query: 41 CKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLR--HARRLFDHLPSPNLHSFK 94
C N++ +K+ H ++ G TKL+ G +ARR+ + + N +
Sbjct: 59 CINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWT 118
Query: 95 AMLRWYFLNNLHSDVVSFYHLTRYT----LGFFHDLVVFSIVLKACSELRDVVQAARLHC 150
A++R Y + + ++ Y R + F FS +LKAC ++D+ + H
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSF-----TFSALLKACGTMKDLNLGRQFHA 173
Query: 151 HVIK-SGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAY-------- 201
+ G +V N ++D Y KC + ARKVFDE+ ER+V+SWT + AY
Sbjct: 174 QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMEC 233
Query: 202 -----------------------VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTK 238
QN E L F+RM + + ++ TV ++AC +
Sbjct: 234 AAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293
Query: 239 LGSLHQGKWVHGYVVKSGIHVNS--FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDL 296
LG+ KSG + + ++L++MY KCG++ +A VF M + ++
Sbjct: 294 LGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM----NNKNV 349
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGL 356
++++MI+G + G +AL LF H +
Sbjct: 350 FTYSSMILGLATHGRAQEALHLF----------------------------------HYM 375
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETT-----VQKDVVSWNSFISGCAQSG 411
V + + NT + + LV R VF++ VQ + + ++G
Sbjct: 376 VTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTG 435
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG--SSIHAFALKDGLVSCSI 469
EALE+ + M E P +L AC + ++ H F L+ ++ I
Sbjct: 436 RLQEALELIKTMSVE----PHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYI 491
Query: 470 YVGTALLNFYAKCGD----AKSARMVFD-GMGEKNAVTW 503
L N YA GD + +++ + G+ + AV+W
Sbjct: 492 L----LSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 244/461 (52%), Gaps = 9/461 (1%)
Query: 232 LVTACTKLGSLHQGKWVHGYVVKS-GIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
L+ AC SLH G + ++ + + N L + L+ ++ C + ARK+FD+ +T
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDD-VTD 195
Query: 291 DDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG 350
L W AM +GYS+ G P AL ++ D + I P +G
Sbjct: 196 SSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVG 255
Query: 351 MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQS 410
+H +VK + V N L+ +Y + L DAR VF+ +++VV+WNS IS ++
Sbjct: 256 RGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKK 315
Query: 411 GSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIY 470
+E +F++M+ E A T+ +L AC+ + AL G IHA LK +
Sbjct: 316 VRVHEMFNLFRKMQEEMIGFSWA-TLTTILPACSRVAALLTGKEIHAQILKSK-EKPDVP 373
Query: 471 VGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE 530
+ +L++ Y KCG+ + +R VFD M K+ +W+ M++ Y + G+ I LF M++
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Query: 531 CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA 590
P+ + F ++L+ CS +G+ G LF M E P+++HYAC+VD+L RAG +KEA
Sbjct: 434 VAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEA 493
Query: 591 LDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASD 650
+ I+ MP +P S++G+ L+ C LH +GE+A + + L P YV+VSN+YA
Sbjct: 494 VKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553
Query: 651 GRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTYSKVTIF 691
W V ++REM+KQRG+ K GCS V++ K+ IF
Sbjct: 554 KMWDNVDKIREMMKQRGVKKEAGCSWVQVK-----DKIQIF 589
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 201/424 (47%), Gaps = 14/424 (3%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPS---DGFVLNGLVDAYSKCGHVCSARKVFDE 185
++ +L AC + + ++ C +I + PS + +L+ L+ +S C + ARK+FD+
Sbjct: 134 YTDLLHACISAKSLHHGIKI-CSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDD 192
Query: 186 IAERNVVS---WTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL 242
+ + ++++ W +M + Y +N + L ++ M F++ +F++ + AC L L
Sbjct: 193 VTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDL 252
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
G+ +H +VK V+ + LL +Y++ G DARKVFD M E ++V+W ++
Sbjct: 253 RVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM----SERNVVTWNSL 308
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
I S++ + LF I + G +H ++K
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 363 FDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
+ P+ N+L+DMY KC V +R VF+ + KD+ SWN ++ A +G+ E + +F+
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKC 482
M ES PD +T V +LS C+ G G S+ + VS ++ L++ +
Sbjct: 429 M-IESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRA 487
Query: 483 GDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGD-GVGSIALFRDMLKEECEPNEVVFTS 540
G K A V + M K +A W ++++ + G+ VG IA + E P V S
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVS 547
Query: 541 VLAA 544
+ A
Sbjct: 548 NIYA 551
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 169/358 (47%), Gaps = 15/358 (4%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFK---AMLRWYFLNNLHSDVVSFYHLTRYT 119
+KL++L++ L AR++FD + +L + K AM Y N D + Y
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVY---VDM 227
Query: 120 LGFFHDLVVFSI--VLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHV 176
L F + FSI LKAC +L+D+ +H ++K D V N L+ Y + G
Sbjct: 228 LCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLF 287
Query: 177 CSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTAC 236
ARKVFD ++ERNVV+W S+ + E LF +M+E + + T+ +++ AC
Sbjct: 288 DDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPAC 347
Query: 237 TKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDL 296
+++ +L GK +H ++KS + L SL++MY KCG++ +R+VFD MLT DL
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK----DL 403
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM-LLHG 355
SW M+ Y+ G+ + + LF +G+ P+ G+ L
Sbjct: 404 ASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFER 463
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS-WNSFISGCAQSGS 412
+ + + L+D+ + + +A V ET K S W S ++ C G+
Sbjct: 464 MKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 233/453 (51%), Gaps = 11/453 (2%)
Query: 228 TVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
T L+ C ++H+G + ++ +G FL L+NMYVK + DA ++FD+M
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 288 LTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXX 347
+ +++SWT MI YS+ KALEL + PN
Sbjct: 123 ----PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 348 XMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGC 407
M LH ++K GL + VR+ALID++AK DA VF+ V D + WNS I G
Sbjct: 179 RM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 408 AQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSC 467
AQ+ + ALE+F+RM+ F A T+ VL AC L L LG H +K
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQA-TLTSVLRACTGLALLELGMQAHVHIVK---YDQ 291
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML 527
+ + AL++ Y KCG + A VF+ M E++ +TWS MISG G ++ LF M
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 528 KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
+PN + VL ACSH+G++ +G F M + P +HY CM+DLL +AG L
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 588 KEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLY 647
+A+ +++M +P + L C + L E A ++++ L P+ A Y L+SN+Y
Sbjct: 412 DDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIY 471
Query: 648 ASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
A+ +W V+++R ++ RG+ K PGCS +E++
Sbjct: 472 ANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVN 504
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 211/427 (49%), Gaps = 47/427 (11%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSA 179
G + D +S ++K C R V + + H+ +G F++N L++ Y K + A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
++FD++ +RNV+SWT+M AY + + L L M V N +T S++ +C +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
+ + +H ++K G+ + F+ ++L++++ K G+ DA VFDEM+T D + W
Sbjct: 176 SDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG----DAIVW 228
Query: 300 TAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
++I G++Q ALELF AG + +GM H +VK
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 360 CGLFDNTPV-RNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALE 418
+D + NAL+DMY KC + DA VF ++DV++W++ ISG AQ+G + EAL+
Sbjct: 289 ---YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALK 345
Query: 419 MFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNF 478
+F+RM+S S + P+ +T+VGVL AC+ HA L+DG Y ++
Sbjct: 346 LFERMKS-SGTKPNYITIVGVLFACS-----------HAGLLEDGW-----YYFRSMKKL 388
Query: 479 YAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVF 538
Y D + E + MI G G ++ L +M ECEP+ V +
Sbjct: 389 YG-----------IDPVREH----YGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTW 430
Query: 539 TSVLAAC 545
++L AC
Sbjct: 431 RTLLGAC 437
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 12/269 (4%)
Query: 41 CKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAM 96
C + V+ H +I G D + L+ ++A G A +FD + + + + ++
Sbjct: 172 CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 97 LRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
+ F N SDV GF + + VL+AC+ L + + H H++K
Sbjct: 232 IGG-FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 290
Query: 157 PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNR 216
D + N LVD Y KCG + A +VF+++ ER+V++W++M QN + E L+LF R
Sbjct: 291 -QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 217 MREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS--GIHVNSFLATSLLNMYVKC 274
M+ N T+ ++ AC+ G L G W + +K GI ++++ K
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 275 GDIGDARKVFDEMLTSDDELDLVSWTAMI 303
G + DA K+ +EM + E D V+W ++
Sbjct: 409 GKLDDAVKLLNEM---ECEPDAVTWRTLL 434
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 183/651 (28%), Positives = 298/651 (45%), Gaps = 92/651 (14%)
Query: 109 VVSFYHLT----RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLN 164
V S+Y LT + +F L+ + + C R V L + +SG +
Sbjct: 41 VSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQC---RQVHAQVLLSDFIFRSGS----LAA 93
Query: 165 GLVDAYSKCGHVCSARKVFDEIAE---RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
L+ Y++ G + AR VF+ ++ ++ W S+ A V + L L+ MR+
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR 281
+ G+ + + ++ AC LG + H V++ G+ N + LL +Y K G +GDA
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFT----------DRNWAGILP-- 329
+F EM + +SW MI G+SQ A+++F + W +L
Sbjct: 214 NLFVEMPVRNR----MSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCH 269
Query: 330 -----------------------NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
+ + +HG V+K G +
Sbjct: 270 SQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYL 329
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM--- 423
P RNALI +Y K V DA ++F K + SWNS I+ +G EAL +F +
Sbjct: 330 PSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEM 389
Query: 424 ---------------------------------RSESFSP--PDAVTVVGVLSACASLGA 448
R FS ++VT+ +LS CA L A
Sbjct: 390 NHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPA 449
Query: 449 LPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMIS 508
L LG IH ++ + S +I V AL+N YAKCG +VF+ + +K+ ++W+++I
Sbjct: 450 LNLGREIHGHVIRTSM-SENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIK 508
Query: 509 GYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
GYGM G ++++F M+ P+ + +VL+ACSH+G+V +G +F+ M +
Sbjct: 509 GYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLE 568
Query: 569 PSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRR 628
P +HYAC+VDLL R G LKEA + + MP++P V V GA L+ C +H ++ E +
Sbjct: 569 PQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQ 628
Query: 629 MLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
+ L P++ Y+L+SN+Y++ GRW VR + K++ L KV G S +E+
Sbjct: 629 LSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEV 679
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 227/521 (43%), Gaps = 88/521 (16%)
Query: 20 SLSSYIAFTLPHPPTLY-----LSPICKNIDTVKKFHASLIVHGFPGDT-----KLLSLY 69
S+SSY + T + +L+ L +C ++ HA +++ F + L+S+Y
Sbjct: 40 SVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVY 99
Query: 70 ASFGFLRHARRLFDHLPS---PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDL 126
A G L AR +F+ + +L + ++L+ + L+ + + Y R G D
Sbjct: 100 ARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR-GLTGDG 158
Query: 127 VVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARKVFDE 185
+ ++L+AC L H VI+ G + V+N L+ Y K G + A +F E
Sbjct: 159 YILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVE 218
Query: 186 IAERNVVSWTSMFVAYVQN-DCAVEGLRLFNRM-REGF---------------------- 221
+ RN +SW M + Q DC +++F M RE F
Sbjct: 219 MPVRNRMSWNVMIKGFSQEYDCE-SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFED 277
Query: 222 ---------VDGNDFTVGSLV---TACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLN 269
+ GN + +L + C +L +L + VHGYV+K G +L++
Sbjct: 278 VLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 337
Query: 270 MYVKCGDIGDARKVF------------------------DEMLTSDDELD---------- 295
+Y K G + DA +F DE L+ EL+
Sbjct: 338 VYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKA 397
Query: 296 -LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
+V+WT++I G + +G +LE F ++ +L N +G +H
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIH 457
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
G V++ + +N V+NAL++MYAKC L+S+ VFE KD++SWNS I G G A
Sbjct: 458 GHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAE 517
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
+AL MF RM S F PD + +V VLSAC+ G + G I
Sbjct: 518 KALSMFDRMISSGFH-PDGIALVAVLSACSHAGLVEKGREI 557
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 255/497 (51%), Gaps = 45/497 (9%)
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHV--NSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
L+ C L GK +H + SG+ S+L+ +L Y G++ A+K+FDE+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
S E D V WT ++ +S+ G + +++LF + + +
Sbjct: 72 S--EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGF 129
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS---------- 399
HG+ VK G+ + V NAL+DMY KC LVS+ + +FE +K VVS
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 400 ---------------------WNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
W ++G +G E LE+ M + VT+
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCS------IYVGTALLNFYAKCGDAKSARMVF 492
+LSACA G L +G +H +ALK ++ + VGTAL++ YAKCG+ S+ VF
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 493 DGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVG 552
M ++N VTW+A+ SG M G G I +F M++ E +P+++ FT+VL+ACSHSG+V
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVD 368
Query: 553 EGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHG 612
EG R FH + R P + HYACMVDLL RAG ++EA + +MPV P V G+ L
Sbjct: 369 EGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 613 CGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVP 672
C +H + E+ E R ++++ P Y +L+SN+Y ++GR + +R +++RG+ K+P
Sbjct: 428 CSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIP 487
Query: 673 GCSLVEIDLNDTYSKVT 689
G S I +ND+ + +
Sbjct: 488 GLS--SIYVNDSVHRFS 502
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 194/468 (41%), Gaps = 79/468 (16%)
Query: 131 IVLKACSELRDVVQAARLHCHVIKSGPSDG---FVLNGLVDAYSKCGHVCSARKVFDEI- 186
++L+ C+ + LH + SG ++ N L Y+ G + +A+K+FDEI
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 187 -AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG 245
+E++ V WT++ ++ + V ++LF MR V+ +D +V L C KL L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD-------------- 291
+ HG VK G+ + + +L++MY KCG + + +++F+E+
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 292 -------------DELDLVSWTAMIVGYSQRGHPLKALELFTDRNW-AGILPNXXXXXXX 337
E + V+WT M+ GY G + LEL + + G N
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGL-------FDNTPVRNALIDMYAKCHLVSDARYVFE 390
+G +H +K + +D+ V AL+DMYAKC + + VF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 391 TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALP 450
+++VV+WN+ SG A G ++MF +M E PD +T VLSAC+ G +
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVD 368
Query: 451 LG-SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISG 509
G H+ L FY E ++ M+
Sbjct: 369 EGWRCFHS------------------LRFYGL---------------EPKVDHYACMVDL 395
Query: 510 YGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRL 557
G G + L R+M PNEVV S+L +CS G V R+
Sbjct: 396 LGRAGLIEEAEILMREM---PVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 141/325 (43%), Gaps = 63/325 (19%)
Query: 48 KKFHASLIVHGFPGDTK------LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYF 101
K+ HA L G + L YAS G + A++LFD +P S K + W
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL----SEKDNVDWTT 81
Query: 102 LNN-------LHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK 154
L + L + + F + R + D V + C++L D+ A + H +K
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEI--DDVSVVCLFGVCAKLEDLGFAQQGHGVAVK 139
Query: 155 SGPSDGF-VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRL 213
G V N L+D Y KCG V +++F+E+ E++VVSWT + V+ + G +
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREV 199
Query: 214 FNRMRE----------------GFVDG----------------NDFTVGSLVTACTKLGS 241
F+ M E GF N T+ S+++AC + G+
Sbjct: 200 FHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 242 LHQGKWVHGYVVKSGIHVNS-------FLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
L G+WVH Y +K + + + T+L++MY KCG+I + VF M +
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM----RKR 315
Query: 295 DLVSWTAMIVGYSQRGHPLKALELF 319
++V+W A+ G + G +++F
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMF 340
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWY 100
C + VK+ L T +L + L R +F +P N ++ M+ Y
Sbjct: 159 CGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGY 218
Query: 101 FLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK------ 154
+V+ + G + V +L AC++ ++V +H + +K
Sbjct: 219 LGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMG 278
Query: 155 --SGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR 212
+ D V LVD Y+KCG++ S+ VF + +RNVV+W ++F + +
Sbjct: 279 EEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVID 338
Query: 213 LFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQG 245
+F +M RE V +D T ++++AC+ G + +G
Sbjct: 339 MFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEG 370
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 279/554 (50%), Gaps = 20/554 (3%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K+ H + ++G + TKL+ +Y + G ++ A+++FD S N++S+ A+LR ++
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 104 --NLHSDVVSFYHLTRYTLGFFHDLVVFSI--VLKACSELRDVVQAARLHCHVIKSGPSD 159
+ DV+S + R LG DL V+S+ V K+ + + Q + H IK+G +
Sbjct: 191 GKKRYQDVLSTFTEMR-ELGV--DLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFN 247
Query: 160 G-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM- 217
F+ LVD Y KCG V AR+VFDEI ER++V W +M N E L LF M
Sbjct: 248 SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMI 307
Query: 218 REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS-FLATSLLNMYVKCGD 276
E + N + +++ + +L GK VH +V+KS +V F+ + L+++Y KCGD
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
Query: 277 IGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXX 336
+ R+VF + + +SWTA++ GY+ G +AL G P+
Sbjct: 368 MASGRRVF----YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIAT 423
Query: 337 XXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKD 396
G +H +K N + +L+ MY+KC + +F+ Q++
Sbjct: 424 VLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRN 483
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
V +W + I ++ +E+F R+ S PD+VT+ VL+ C+ L AL LG +H
Sbjct: 484 VKAWTAMIDCYVENCDLRAGIEVF-RLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELH 542
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDG 516
LK S +V ++ Y KCGD +SA FD + K ++TW+A+I YG
Sbjct: 543 GHILKKEFESIP-FVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELF 601
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC 576
+I F M+ PN FT+VL+ CS +G V E R F++M R N PS +HY+
Sbjct: 602 RDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSL 661
Query: 577 MVDLLARAGNLKEA 590
+++LL R G ++EA
Sbjct: 662 VIELLNRCGRVEEA 675
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 259/524 (49%), Gaps = 17/524 (3%)
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGF 161
NNL + +L + G + FS +L+AC + ++ ++H H+ +G S+ F
Sbjct: 90 NNLEVALTILDYLEQR--GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCA--VEGLRLFNRMRE 219
+ LV Y+ CG V A+KVFDE NV SW ++ V + + L F MRE
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 220 GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD 279
VD N +++ ++ + +L QG H +K+G+ + FL TSL++MY KCG +G
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL 267
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF-TDRNWAGILPNXXXXXXXX 338
AR+VFDE++ E D+V W AMI G + +AL LF T + I PN
Sbjct: 268 ARRVFDEIV----ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Query: 339 XXXXXXXXXXMGMLLHGLVVKCGLFDNTP-VRNALIDMYAKCHLVSDARYVFETTVQKDV 397
+G +H V+K + P V + LID+Y KC ++ R VF + Q++
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNA 383
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA 457
+SW + +SG A +G +AL M+ E F PD VT+ VL CA L A+ G IH
Sbjct: 384 ISWTALMSGYAANGRFDQALRSIVWMQQEGFR-PDVVTIATVLPVCAELRAIKQGKEIHC 442
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
+ALK+ L ++ + T+L+ Y+KCG + +FD + ++N W+AMI Y D
Sbjct: 443 YALKN-LFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLR 501
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF-HMMCRELNFVPSMKHYAC 576
I +FR ML + P+ V VL CS + G L H++ +E +P + A
Sbjct: 502 AGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--AR 559
Query: 577 MVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFE 620
++ + + G+L+ A D + V+ G + A + G + F
Sbjct: 560 IIKMYGKCGDLRSANFSFDAVAVK-GSLTWTAIIEAYGCNELFR 602
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 212/424 (50%), Gaps = 11/424 (2%)
Query: 203 QNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF 262
QN+ V L + + + + + N T +L+ AC + SL GK VH ++ +G+ N F
Sbjct: 89 QNNLEV-ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 263 LATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG--YSQRGHPLKALELFT 320
L T L++MY CG + DA+KVFDE +S ++ SW A++ G S + L FT
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSS----NVYSWNALLRGTVISGKKRYQDVLSTFT 203
Query: 321 DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCH 380
+ G+ N G+ H L +K GLF++ ++ +L+DMY KC
Sbjct: 204 EMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG 263
Query: 381 LVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
V AR VF+ V++D+V W + I+G A + +EAL +F+ M SE P++V + +L
Sbjct: 264 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Query: 441 SACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNA 500
+ AL LG +HA LK +V + L++ Y KCGD S R VF G ++NA
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNA 383
Query: 501 VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
++W+A++SGY G ++ M +E P+ V +VL C+ + +G +
Sbjct: 384 ISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCY 443
Query: 561 MCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP---VQPGVSVFGAYLHGCGLHS 617
+ L F+P++ ++ + ++ G + + D++ V+ ++ Y+ C L +
Sbjct: 444 ALKNL-FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 618 EFEL 621
E+
Sbjct: 503 GIEV 506
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 176/623 (28%), Positives = 290/623 (46%), Gaps = 53/623 (8%)
Query: 65 LLSLYASFGFL-RHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFF 123
LLS+YA GF+ + R+F+ L PN S+ A++ N + V + L G
Sbjct: 179 LLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-CEKGVQ 237
Query: 124 HDLVVFSIVL------KACSELRDVVQ---AARLHCHVIKSG-PSDGFVLNGLVDAYSKC 173
D V S +L + C L ++ ++HC ++ G D + N L++ Y+K
Sbjct: 238 VDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKN 297
Query: 174 GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
+ A +F E+ E NVVSW M V + Q + + + RMR+ N+ T S++
Sbjct: 298 KDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVL 357
Query: 234 TACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDE 293
AC + GD+ R++F +S +
Sbjct: 358 GAC-----------------------------------FRSGDVETGRRIF----SSIPQ 378
Query: 294 LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLL 353
+ +W AM+ GYS H +A+ F + + P+ G +
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Query: 354 HGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK-DVVSWNSFISGCAQSGS 412
HG+V++ + N+ + + LI +Y++C + + +F+ + + D+ WNS ISG +
Sbjct: 439 HGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNML 498
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
+AL +F+RM + P+ + VLS+C+ L +L G H +K G VS S +V
Sbjct: 499 DTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDS-FVE 557
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECE 532
TAL + Y KCG+ SAR FD + KN V W+ MI GYG G G ++ L+R M+ +
Sbjct: 558 TALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEK 617
Query: 533 PNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALD 592
P+ + F SVL ACSHSG+V G + M R P + HY C+VD L RAG L++A
Sbjct: 618 PDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEK 677
Query: 593 FIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGR 652
+ P + ++ L C +H + L +++ L P + YVL+SN Y+S +
Sbjct: 678 LAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQ 737
Query: 653 WGMVKQVREMIKQRGLNKVPGCS 675
W ++ ++ + ++K PG S
Sbjct: 738 WDDSAALQGLMNKNRVHKTPGQS 760
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 186/410 (45%), Gaps = 47/410 (11%)
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD------------- 291
GK +HG++V+ G+ +++L LL++Y++CGD ARKVFDEM D
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 292 --------------DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXX 337
E D+VSW MI ++G KAL ++ G LP+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD-ARYVFETTVQKD 396
GM HG+ VK GL N V NAL+ MYAKC + D VFE+ Q +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLS------ACASLGAL- 449
VS+ + I G A+ EA++MF R+ E D+V + +LS C SL +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMF-RLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 450 --PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMI 507
LG IH AL+ G +++ +LL YAK D A ++F M E N V+W+ MI
Sbjct: 264 GNELGKQIHCLALRLGF-GGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 508 SGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNF 567
G+G + S+ M +PNEV SVL AC SG V G R+F + +
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ---- 378
Query: 568 VPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ---PGVSVFGAYLHGCG 614
PS+ + M+ + + +EA+ +M Q P + L C
Sbjct: 379 -PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 154/618 (24%), Positives = 266/618 (43%), Gaps = 98/618 (15%)
Query: 48 KKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRW---- 99
K H ++ G DT +LL LY G +AR++FD + +++S+ A L +
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 100 --------YFLNNLHSDVVSFYHLTRYTL------------------GFFHDLVVFSIVL 133
F DVVS+ ++ + GF + VL
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 134 KACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCS-ARKVFDEIAERNV 191
ACS++ D V R H +K+G + FV N L+ Y+KCG + +VF+ +++ N
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNE 205
Query: 192 VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD------GNDFTVGSLVTACTKLGSLHQ- 244
VS+T++ + + +E +++F M E V N ++ + C L ++
Sbjct: 206 VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGN 265
Query: 245 --GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
GK +H ++ G + L SLL +Y K D+ A +F EM E+++VSW M
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM----PEVNVVSWNIM 321
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
IVG+ Q K++E T +G PN V C
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMRDSGFQPNE--------------------------VTC-- 353
Query: 363 FDNTPVRNALIDMYAKCHLVSD---ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
I + C D R +F + Q V +WN+ +SG + EA+
Sbjct: 354 ----------ISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFY 479
F++M+ ++ PD T+ +LS+CA L L G IH ++ +S + ++ + L+ Y
Sbjct: 404 FRQMQFQNL-KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTE-ISKNSHIVSGLIAVY 461
Query: 480 AKCGDAKSARMVFDG-MGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE--CEPNEV 536
++C + + +FD + E + W++MISG+ ++ LFR M + C PNE
Sbjct: 462 SECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLC-PNET 520
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
F +VL++CS + G R FH + + +V + D+ + G + A F D
Sbjct: 521 SFATVLSSCSRLCSLLHG-RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 597 MPVQPGVSVFGAYLHGCG 614
+ ++ ++ +HG G
Sbjct: 580 V-LRKNTVIWNEMIHGYG 596
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 243/466 (52%), Gaps = 26/466 (5%)
Query: 221 FVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDA 280
F D + F V L+ C+ L S+ V YV N +L T++++ +V G D
Sbjct: 56 FHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP----NVYLYTAMIDGFVSSGRSADG 111
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW-AGILPNXXXXXXXXX 339
++ M+ + D T++ LKA +L R A +L
Sbjct: 112 VSLYHRMIHNSVLPDNYVITSV----------LKACDLKVCREIHAQVLKLGFGSSRSVG 161
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRN-----ALIDMYAKCHLVSDARYVFETTVQ 394
G L++ +FD P R+ +I+ Y++C + +A +F+
Sbjct: 162 LKMMEIYGKSGELVNAK----KMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKI 217
Query: 395 KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
KD V W + I G ++ +ALE+F+ M+ E+ S + T V VLSAC+ LGAL LG
Sbjct: 218 KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA-NEFTAVCVLSACSDLGALELGRW 276
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
+H+F +++ + S +VG AL+N Y++CGD AR VF M +K+ ++++ MISG M G
Sbjct: 277 VHSF-VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHG 335
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
V +I FRDM+ PN+V ++L ACSH G++ G +F+ M R N P ++HY
Sbjct: 336 ASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHY 395
Query: 575 ACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP 634
C+VDLL R G L+EA FI+ +P++P + G L C +H ELGE +R+ E
Sbjct: 396 GCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN 455
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+ YVL+SNLYAS G+W ++RE ++ G+ K PGCS +E+D
Sbjct: 456 PDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 209/491 (42%), Gaps = 81/491 (16%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAM 96
CKNI V HA +I D +L+ + ++ + +A +F ++ +PN++ + AM
Sbjct: 39 CKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAM 98
Query: 97 LRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
+ + + +D VS YH + D V + VLKAC D+ +H V+K G
Sbjct: 99 IDGFVSSGRSADGVSLYHRMIHN-SVLPDNYVITSVLKAC----DLKVCREIHAQVLKLG 153
Query: 157 ---------------PSDGFVLNG-----------------LVDAYSKCGHVCSARKVFD 184
G ++N +++ YS+CG + A ++F
Sbjct: 154 FGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQ 213
Query: 185 EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQ 244
++ ++ V WT+M V+N + L LF M+ V N+FT +++AC+ LG+L
Sbjct: 214 DVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALEL 273
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
G+WVH +V + +++F+ +L+NMY +CGDI +AR+VF M + D++S+ MI
Sbjct: 274 GRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM----RDKDVISYNTMIS 329
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
G + G ++A+ F D G PN + HG ++ GL
Sbjct: 330 GLAMHGASVEAINEFRDMVNRGFRPN-----------QVTLVALLNACSHGGLLDIGL-- 376
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
+ + + VF V+ + + + + G EA + +
Sbjct: 377 ---------------EVFNSMKRVF--NVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP 419
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
E PD + + +LSAC G + LG I + YV L N YA G
Sbjct: 420 IE----PDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYV--LLSNLYASSGK 473
Query: 485 AKSARMVFDGM 495
K + + + M
Sbjct: 474 WKESTEIRESM 484
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 233/552 (42%), Gaps = 96/552 (17%)
Query: 132 VLKACSELRDVVQAARLHCHVIKS-GPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERN 190
VL++C +++ +H +I++ D FV+ L+ S V A VF ++ N
Sbjct: 35 VLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 191 VVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHG 250
V +T+M +V + + +G+ L++RM V +++ + S++ AC L + +H
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHA 147
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD------------------ 292
V+K G + + ++ +Y K G++ +A+K+FDEM D
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 293 --EL-------DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
EL D V WTAMI G + KALELF + + N
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 344 XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSF 403
+G +H V + + V NALI+MY++C +++AR VF KDV+S+N+
Sbjct: 268 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 327
Query: 404 ISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDG 463
ISG A G++ EA+ F+ M + F P+ VT+V +L+AC+ G L +G
Sbjct: 328 ISGLAMHGASVEAINEFRDMVNRGFR-PNQVTLVALLNACSHGGLLDIGLE--------- 377
Query: 464 LVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIA-- 521
VF+ M K I YG D +G +
Sbjct: 378 ---------------------------VFNSM--KRVFNVEPQIEHYGCIVDLLGRVGRL 408
Query: 522 --LFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
+R + EP+ ++ ++L+AC G + G ++ + N P Y + +
Sbjct: 409 EEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN--PDSGTYVLLSN 466
Query: 580 LLARAGNLKEALDFIDKM-----PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP 634
L A +G KE+ + + M +PG S +H EF +G++A HP
Sbjct: 467 LYASSGKWKESTEIRESMRDSGIEKEPGCSTIEV---DNQIH-EFLVGDIA-------HP 515
Query: 635 DQACYYVLVSNL 646
+ Y + L
Sbjct: 516 HKEAIYQRLQEL 527
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 251/469 (53%), Gaps = 16/469 (3%)
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR 281
V N ++V A ++ L Q VH +++ +G + L T L+ + I
Sbjct: 5 VAANSAAYEAIVRAGPRVKQLQQ---VHAHLIVTGYGRSRSLLTKLITLACSARAIAYTH 61
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXX 341
+F + DD L + ++I S+ PL + + + + P+
Sbjct: 62 LLFLSVPLPDDFL----FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 342 XXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWN 401
+G +H V G +T V+ AL+ Y+KC + AR VF+ +K +V+WN
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 402 SFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK 461
S +SG Q+G A EA+++F +MR F P D+ T V +LSACA GA+ LGS +H + +
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEP-DSATFVSLLSACAQTGAVSLGSWVHQYIIS 236
Query: 462 DGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIA 521
+GL ++ +GTAL+N Y++CGD AR VFD M E N W+AMIS YG G G ++
Sbjct: 237 EGL-DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVE 295
Query: 522 LFRDMLKEECEP--NEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
LF M +++C P N V F +VL+AC+H+G+V EG ++ M + +P ++H+ CMVD
Sbjct: 296 LFNKM-EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVD 354
Query: 580 LLARAGNLKEALDFIDKMPVQ---PGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQ 636
+L RAG L EA FI ++ +++ A L C +H ++LG +R++ L PD
Sbjct: 355 MLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDN 414
Query: 637 ACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDTY 685
++V++SN+YA G+ V +R+ + + L K G S++E++ N TY
Sbjct: 415 PGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVE-NKTY 462
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 164/293 (55%), Gaps = 11/293 (3%)
Query: 44 IDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRW 99
+ +++ HA LIV G+ TKL++L S + + LF +P P+ F ++++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 100 YFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS- 158
L V++Y + F+ V+K+C++L + +HCH + SG
Sbjct: 82 TSKLRLPLHCVAYYR-RMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
D +V LV YSKCG + AR+VFD + E+++V+W S+ + QN A E +++F +MR
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
E + + T SL++AC + G++ G WVH Y++ G+ +N L T+L+N+Y +CGD+G
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD-RNWAGILPN 330
AR+VFD+M E ++ +WTAMI Y G+ +A+ELF + G +PN
Sbjct: 261 KAREVFDKM----KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPN 309
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 147/304 (48%), Gaps = 8/304 (2%)
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
+ RM V +++T S++ +C L +L GK VH + V SG +++++ +L+ Y K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
CGD+ AR+VFD M E +V+W +++ G+ Q G +A+++F +G P+
Sbjct: 155 CGDMEGARQVFDRM----PEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSAT 210
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV 393
+G +H ++ GL N + ALI++Y++C V AR VF+
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 394 QKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGS 453
+ +V +W + IS G +A+E+F +M + P+ VT V VLSACA G + G
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGR 330
Query: 454 SIHAFALKDGLVSCSIYVGTALLNFYAKCG---DAKSARMVFDGMGEKNA-VTWSAMISG 509
S++ K + + +++ + G +A D G+ A W+AM+
Sbjct: 331 SVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Query: 510 YGMQ 513
M
Sbjct: 391 CKMH 394
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 273/554 (49%), Gaps = 55/554 (9%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVD--AYSKCGHVCSARKVFDEIAE 188
+L +C LR + Q +H IK G +D + L+ A S + AR++ E
Sbjct: 11 LLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLF-NRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
+ + ++ Y ++D + +F MR+GFV + F+ ++ A SL G
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
+H +K G+ + F+ T+L+ MY CG + ARKVFDEM + +LV+W A+I
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM----HQPNLVAWNAVITACF 183
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
+ A E+F L N
Sbjct: 184 RGNDVAGAREIFDKM---------------------------------------LVRNHT 204
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES 427
N ++ Y K + A+ +F +D VSW++ I G A +GS E+ F+ ++
Sbjct: 205 SWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG 264
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKS 487
SP + V++ GVLSAC+ G+ G +H F K G S + V AL++ Y++CG+
Sbjct: 265 MSP-NEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY-SWIVSVNNALIDMYSRCGNVPM 322
Query: 488 ARMVFDGMGEKNA-VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
AR+VF+GM EK V+W++MI+G M G G ++ LF +M P+ + F S+L ACS
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
H+G++ EG F M R + P ++HY CMVDL R+G L++A DFI +MP+ P V+
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVRE-MIKQ 665
L C H EL E +R+ EL P+ + VL+SN YA+ G+W V +R+ MI Q
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 666 RGLNKVPGCSLVEI 679
R + K SLVE+
Sbjct: 503 R-IKKTTAWSLVEV 515
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 209/486 (43%), Gaps = 57/486 (11%)
Query: 41 CKNIDTVKKFHASLIVHGFPGD---TKLLSLYASFGF---LRHARRLFDHLPSPNLHSFK 94
CKN+ + + H I +G D T L L+ + L +ARRL P P+ F
Sbjct: 15 CKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFN 74
Query: 95 AMLRWYFLNNL-HSDVVSFYHLTRYTLGF-FHDLVVFSIVLKACSELRDVVQAARLHCHV 152
++R Y ++ H+ V F + R GF F D F+ V+KA R + ++HC
Sbjct: 75 TLVRGYSESDEPHNSVAVFVEMMRK--GFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 153 IKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
+K G S FV L+ Y CG V ARKVFDE+ + N+V+W ++ A + +
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAR 192
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
+F++M +V++ N LA Y
Sbjct: 193 EIFDKM----------------------------------LVRNHTSWNVMLAG-----Y 213
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
+K G++ A+++F EM DD VSW+ MIVG + G ++ F + AG+ PN
Sbjct: 214 IKAGELESAKRIFSEMPHRDD----VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNE 269
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFET 391
G +LHG V K G V NALIDMY++C V AR VFE
Sbjct: 270 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEG 329
Query: 392 TVQKD-VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALP 450
+K +VSW S I+G A G EA+ +F M + + PD ++ + +L AC+ G +
Sbjct: 330 MQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT-PDGISFISLLHACSHAGLIE 388
Query: 451 LGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISG 509
G + + + I +++ Y + G + A M A+ W ++
Sbjct: 389 EGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGA 448
Query: 510 YGMQGD 515
G+
Sbjct: 449 CSSHGN 454
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 165/404 (40%), Gaps = 53/404 (13%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG-DIGDARKVFDEMLT 289
SL+ +C L +L Q +HG +K G+ +S+ L+ + C I DA +L
Sbjct: 10 SLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLL 63
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG-ILPNXXXXXXXXXXXXXXXXXX 348
E D + ++ GYS+ P ++ +F + G + P+
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 349 MGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCA 408
G +H +K GL + V LI MY C V AR VF+ Q ++V+WN+ I+ C
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
+ A E+F +M + + +
Sbjct: 184 RGNDVAGAREIFDKMLVRNHTSWN------------------------------------ 207
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
+L Y K G+ +SA+ +F M ++ V+WS MI G G S FR++ +
Sbjct: 208 -----VMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
PNEV T VL+ACS SG E ++ H + + + ++D+ +R GN+
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSF-EFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVP 321
Query: 589 EALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLEL 632
A + M + + + + + G +H + GE A+R E+
Sbjct: 322 MARLVFEGMQEKRCIVSWTSMIAGLAMHGQ---GEEAVRLFNEM 362
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 178/420 (42%), Gaps = 50/420 (11%)
Query: 42 KNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAML 97
+++ T + H + HG T L+ +Y G + AR++FD + PNL
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNL------- 172
Query: 98 RWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGP 157
V ++ V+ AC DV A + ++
Sbjct: 173 -----------------------------VAWNAVITACFRGNDVAGAREIFDKMLVRNH 203
Query: 158 SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM 217
+ N ++ Y K G + SA+++F E+ R+ VSW++M V N E F +
Sbjct: 204 TS---WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL 260
Query: 218 REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDI 277
+ + N+ ++ +++AC++ GS GK +HG+V K+G + +L++MY +CG++
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNV 320
Query: 278 GDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXX 337
AR VF+ M ++ +VSWT+MI G + G +A+ LF + G+ P+
Sbjct: 321 PMARLVFEGM---QEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFD-NTPVRNALIDMYAKCHLVSDA-RYVFETTVQK 395
G + + + ++D+Y + + A ++ + +
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPP 437
Query: 396 DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
+ W + + C+ G+ A ++ QR+ P ++ +V + +A A+ G +SI
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLN--ELDPNNSGDLVLLSNAYATAGKWKDVASI 495
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 194/693 (27%), Positives = 311/693 (44%), Gaps = 116/693 (16%)
Query: 62 DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLG 121
+TKLLS+YA G + AR++FD + NL ++ AM+ Y N +V + L
Sbjct: 118 ETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 122 FFHDL-------------------VVFSIVLK------------------ACSEL----- 139
D V+ S+V+K C EL
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 140 -------RDVV----------------QAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGH 175
RDV+ +A L + K G S G V N L+ Y++ G
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 176 VCSARKVFDEIAE----RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGS 231
+A + ++ +V +WT+M + N + L +F +M V N T+ S
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
V+AC+ L ++QG VH VK G + + SL++MY KCG + DARKVFD + D
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM 351
+ +W +MI GY Q G+ KA ELFT A + PN
Sbjct: 418 ----VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW----------------- 456
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFET-----TVQKDVVSWNSFISG 406
N +I Y K +A +F+ VQ++ +WN I+G
Sbjct: 457 ------------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG 498
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
Q+G EALE+F++M+ F P ++VT++ +L ACA+L + IH L+ L +
Sbjct: 499 YIQNGKKDEALELFRKMQFSRFMP-NSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDM 526
V AL + YAK GD + +R +F GM K+ +TW+++I GY + G ++ALF M
Sbjct: 558 IHA-VKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Query: 527 LKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGN 586
+ PN +S++ A G V EG ++F+ + + + +P+++H + MV L RA
Sbjct: 617 KTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANR 676
Query: 587 LKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNL 646
L+EAL FI +M +Q ++ ++L GC +H + ++ A + L P+ +VS +
Sbjct: 677 LEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQI 736
Query: 647 YASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
YA + G + + + L K G S +E+
Sbjct: 737 YALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEV 769
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 214/443 (48%), Gaps = 45/443 (10%)
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
D FV L+ Y+KCG + ARKVFD + ERN+ +W++M AY + + E +LF M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
+ V +DF ++ C G + GK +H V+K G+ ++ S+L +Y KCG++
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXX 338
A K F M E D+++W ++++ Y Q G +A+EL + GI P
Sbjct: 234 FATKFFRRM----RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP--------- 280
Query: 339 XXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMY---AKCHLVSDARYVFET-TVQ 394
GLV N LI Y KC D ET +
Sbjct: 281 ----------------GLV----------TWNILIGGYNQLGKCDAAMDLMQKMETFGIT 314
Query: 395 KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS 454
DV +W + ISG +G Y+AL+MF++M P+AVT++ +SAC+ L + GS
Sbjct: 315 ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV-PNAVTIMSAVSACSCLKVINQGSE 373
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
+H+ A+K G + + VG +L++ Y+KCG + AR VFD + K+ TW++MI+GY G
Sbjct: 374 VHSIAVKMGFID-DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
+ LF M PN + + ++++ +G GE LF M ++ + +
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 575 ACMVDLLARAGNLKEALDFIDKM 597
++ + G EAL+ KM
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKM 515
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 251/512 (49%), Gaps = 62/512 (12%)
Query: 229 VGSLVTACTKLGSLHQGKWVHGYVVKSGI-HVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
+ SL+ C SL QGKW+H ++ +G N+ L+ L+ MY+KCG DA KVFD+M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 288 ---------------------------LTSDDELDLVSWTAMIVGYSQRGHPLKALELFT 320
S E D+VSW M++GY+Q G+ +AL +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 321 DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCH 380
+ +GI N + HG V+ G N + ++ID YAKC
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 381 LVSDARYVFETTVQKDV-------------------------------VSWNSFISGCAQ 409
+ A+ F+ KD+ VSW + I+G +
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
GS AL++F++M + P + T L A AS+ +L G IH + ++ + +I
Sbjct: 289 QGSGNRALDLFRKMIALGVKP-EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
+ ++L++ Y+K G +++ VF +K + V W+ MIS G G ++ + DM+K
Sbjct: 348 VI-SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
+PN +L ACSHSG+V EG R F M + VP +HYAC++DLL RAG K
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 589 EALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYA 648
E + I++MP +P ++ A L C +H ELG+ A +++L P+ + Y+L+S++YA
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYA 526
Query: 649 SDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
G+W +V+++R ++K+R +NK S +EI+
Sbjct: 527 DHGKWELVEKLRGVMKKRRVNKEKAVSWIEIE 558
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 198/465 (42%), Gaps = 52/465 (11%)
Query: 12 SKSLIQFRSLSSYIAFTLPHPPTLYLS--------PICKNIDTVKKFHASLIVHGFPGDT 63
+KSL Q + + ++ T P LS K ID K F + + + +
Sbjct: 59 TKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNN 118
Query: 64 KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN-NLHSDVVSFYHLTRYTLGF 122
++S Y G L AR +FD +P ++ S+ M+ Y + NLH + + FY R + G
Sbjct: 119 -MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLH-EALWFYKEFRRS-GI 175
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLN-GLVDAYSKCGHVCSARK 181
+ F+ +L AC + R + + H V+ +G VL+ ++DAY+KCG + SA++
Sbjct: 176 KFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKR 235
Query: 182 VFDEIA-------------------------------ERNVVSWTSMFVAYVQNDCAVEG 210
FDE+ E+N VSWT++ YV+
Sbjct: 236 CFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRA 295
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
L LF +M V FT S + A + SL GK +HGY++++ + N+ + +SL++M
Sbjct: 296 LDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDM 355
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y K G + + +VF DD+ D V W MI +Q G KAL + D + PN
Sbjct: 356 YSKSGSLEASERVFR---ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPN 412
Query: 331 XXXXXXXXXXXXXXXXXXMGM-LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD-ARYV 388
G+ + V+ G+ + LID+ + + R +
Sbjct: 413 RTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKI 472
Query: 389 FETTVQKDVVSWNSFISGCAQSGS---AYEALEMFQRMRSESFSP 430
E + D WN+ + C G+ +A + ++ ES +P
Sbjct: 473 EEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAP 517
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 262/544 (48%), Gaps = 50/544 (9%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCG----HVCSARKVFDEI 186
+L + + + + H ++K+G D F + LV A++ V A + + I
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLV-AFAATNPEPKTVSYAHSILNRI 100
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
N + S+ AY + L +F M G V + ++ ++ AC +G+
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+HG +KSG+ + F+ +L+N+Y + G ARKV D M D VSW +++ Y
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD----AVSWNSLLSAY 216
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
++G +A LF + N
Sbjct: 217 LEKGLVDEARALFDEMEER---------------------------------------NV 237
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
N +I YA LV +A+ VF++ +DVVSWN+ ++ A G E LE+F +M +
Sbjct: 238 ESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDD 297
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
S PD T+V VLSACASLG+L G +H + K G + ++ TAL++ Y+KCG
Sbjct: 298 STEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG-IEIEGFLATALVDMYSKCGKID 356
Query: 487 SARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
A VF +++ TW+++IS + G G ++ +F +M+ E +PN + F VL+AC+
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACN 416
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVF 606
H GM+ + +LF MM P+++HY CMVDLL R G ++EA + ++++P +
Sbjct: 417 HVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILL 476
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQR 666
+ L C + E E R+LEL+ + Y +SNLYASDGRW V R ++
Sbjct: 477 ESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAE 536
Query: 667 GLNK 670
+N+
Sbjct: 537 RVNR 540
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 222/543 (40%), Gaps = 118/543 (21%)
Query: 15 LIQFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGDT----KLLSLYA 70
L+Q +L + P L + K++ +++ HA ++ G DT KL++ A
Sbjct: 23 LLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAA 82
Query: 71 SF---GFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLG-FFHDL 126
+ + +A + + + SPN + +++R Y N + V+ LG F D
Sbjct: 83 TNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY--ANSSTPEVALTVFREMLLGPVFPDK 140
Query: 127 VVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKV--- 182
F+ VLKAC+ + ++H IKSG +D FV N LV+ Y + G+ ARKV
Sbjct: 141 YSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR 200
Query: 183 ----------------------------FDEIAERN------------------------ 190
FDE+ ERN
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVF 260
Query: 191 -------VVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND-FTVGSLVTACTKLGSL 242
VVSW +M AY C E L +FN+M + + D FT+ S+++AC LGSL
Sbjct: 261 DSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSL 320
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
QG+WVH Y+ K GI + FLAT+L++MY KCG I A +VF + + D+ +W ++
Sbjct: 321 SQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF----RATSKRDVSTWNSI 376
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
I S G ALE+F++ + G PN G+ G++ C
Sbjct: 377 ISDLSVHGLGKDALEIFSEMVYEGFKPN-------------------GITFIGVLSACN- 416
Query: 363 FDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
++D K + + Y E T++ + + + G EA E+
Sbjct: 417 ------HVGMLDQARKLFEMMSSVYRVEPTIEH----YGCMVDLLGRMGKIEEAEELVNE 466
Query: 423 MRSESFSPPDAVTVV--GVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+ P D +++ +L AC G L I L+ L S Y + N YA
Sbjct: 467 I------PADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGY--AQMSNLYA 518
Query: 481 KCG 483
G
Sbjct: 519 SDG 521
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 293/648 (45%), Gaps = 88/648 (13%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN--------LHSDVVSFYHLT 116
++S YA G + A ++FD +P S+ AM+ N L D+ ++
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS 146
Query: 117 RYTL--GFFH----DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFV-------- 162
T+ GF D F + + + RD V + L +++G + V
Sbjct: 147 YATMITGFVRAGRFDEAEF-LYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 163 -----LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM 217
+ +V Y K G + AR +FD + ERNV++WT+M Y + +G LF RM
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 218 R-EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGD 276
R EG V N T+ + AC +G +HG V + + + FL SL++MY K G
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 277 IGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR------NWAGILPN 330
+G+A+ VF M D VSW ++I G QR +A ELF +W ++
Sbjct: 326 MGEAKAVFGVMKNKDS----VSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIK- 380
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKC-GLFDNTPVRNALIDMYAKCHLVSDARYVF 389
G G + KC LF P
Sbjct: 381 -------------------GFSGKGEISKCVELFGMMP---------------------- 399
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
+KD ++W + IS +G EAL F +M + P ++ T VLSA ASL L
Sbjct: 400 ----EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCP-NSYTFSSVLSATASLADL 454
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISG 509
G IH +K +V+ + V +L++ Y KCG+ A +F + E N V+++ MISG
Sbjct: 455 IEGLQIHGRVVKMNIVN-DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG 513
Query: 510 YGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVP 569
Y G G ++ LF + EPN V F ++L+AC H G V G + F M N P
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEP 573
Query: 570 SMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRM 629
HYACMVDLL R+G L +A + I MP +P V+G+ L H +L E+A +++
Sbjct: 574 GPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKL 633
Query: 630 LELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
+EL PD A YV++S LY+ G+ ++ + K + + K PG S +
Sbjct: 634 IELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T ++ ++ G + LF +P + ++ AM+ + N + + + ++H
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFH-KMLQKEV 434
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARK 181
+ FS VL A + L D+++ ++H V+K +D V N LV Y KCG+ A K
Sbjct: 435 CPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYK 494
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
+F I+E N+VS+ +M Y N + L+LF+ + + N T +L++AC +G
Sbjct: 495 IFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGY 554
Query: 242 LHQGKWVHGYVVKSGIHV 259
+ G W + +KS ++
Sbjct: 555 VDLG-WKYFKSMKSSYNI 571
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 371 ALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQS----GSAYE----------- 415
A+I YA+ +S A VF+ + S+N+ I+ ++ G AYE
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 416 --ALEMFQRMRSESFSPPD---AVTVVGVLSACAS----LGALPLGSSIHAFALKDGLVS 466
A + +R+ F + A T V + AS G L G A + G+
Sbjct: 146 SYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG---DGVGSIALF 523
+ +++++ Y K G AR +FD M E+N +TW+AMI GY G DG G LF
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFG---LF 262
Query: 524 RDMLKE-ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
M +E + + N + AC EGS++ ++ R
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSR 303
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 255/484 (52%), Gaps = 8/484 (1%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYH-LTRYTLG 121
L+S G L +AR++FD +P N ++ AM+ Y L + + + ++ +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARK 181
F ++ + F +L CS + ++H +++K G + V + LV Y++CG + SA +
Sbjct: 181 FTNERM-FVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALR 239
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
FD + E++V+SWT++ A + ++ + +F M + N+FTV S++ AC++ +
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
L G+ VH VVK I + F+ TSL++MY KCG+I D RKVFD M + V+WT+
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM----SNRNTVTWTS 355
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
+I +++ G +A+ LF ++ N +G LH ++K
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
+ N + + L+ +Y KC DA V + +DVVSW + ISGC+ G EAL+ +
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
M E P+ T L ACA+ +L +G SIH+ A K+ +S +++VG+AL++ YAK
Sbjct: 476 EMIQEGV-EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAK 533
Query: 482 CGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
CG A VFD M EKN V+W AMI GY G ++ L M E E ++ +F ++
Sbjct: 534 CGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATI 593
Query: 542 LAAC 545
L+ C
Sbjct: 594 LSTC 597
Score = 232 bits (591), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 237/442 (53%), Gaps = 9/442 (2%)
Query: 164 NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLF-NRMREGFV 222
N L+ + + G + ARKVFD + E+N V+WT+M Y++ E LF + ++ G
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
N+ L+ C++ G+ VHG +VK G+ N + +SL+ Y +CG++ A +
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALR 239
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
FD M +E D++SWTA+I S++GH +KA+ +F LPN
Sbjct: 240 AFDMM----EEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS 295
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
G +H LVVK + + V +L+DMYAKC +SD R VF+ ++ V+W S
Sbjct: 296 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS 355
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
I+ A+ G EA+ +F+ M+ + +TVV +L AC S+GAL LG +HA +K+
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHL-IANNLTVVSILRACGSVGALLLGKELHAQIIKN 414
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIAL 522
+ ++Y+G+ L+ Y KCG+++ A V + ++ V+W+AMISG G ++
Sbjct: 415 S-IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDF 473
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLA 582
++M++E EPN ++S L AC++S + G R H + ++ + + ++ + ++ + A
Sbjct: 474 LKEMIQEGVEPNPFTYSSALKACANSESLLIG-RSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 583 RAGNLKEALDFIDKMPVQPGVS 604
+ G + EA D MP + VS
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVS 554
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 210/416 (50%), Gaps = 13/416 (3%)
Query: 48 KKFHASLIVHGFPG---DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
++ H +++ G ++ L+ YA G L A R FD + ++ S+ A++
Sbjct: 204 RQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 105 LHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVL 163
+ + + F + +LKACSE + + ++H V+K +D FV
Sbjct: 264 HGIKAIGMF-IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322
Query: 164 NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD 223
L+D Y+KCG + RKVFD ++ RN V+WTS+ A+ + E + LF M+ +
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
N+ TV S++ AC +G+L GK +H ++K+ I N ++ ++L+ +Y KCG+ DA V
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
++ + D+VSWTAMI G S GH +AL+ + G+ PN
Sbjct: 443 LQQLPSR----DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACAN 498
Query: 344 XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSF 403
+G +H + K N V +ALI MYAKC VS+A VF++ +K++VSW +
Sbjct: 499 SESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAM 558
Query: 404 ISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA 459
I G A++G EAL++ RM +E F D + +LS C G + L ++ + A
Sbjct: 559 IMGYARNGFCREALKLMYRMEAEGFEVDDYIFAT-ILSTC---GDIELDEAVESSA 610
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 190/369 (51%), Gaps = 10/369 (2%)
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
K +H +K + +L++ V+ GD+ ARKVFD M E + V+WTAMI G
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSM----PEKNTVTWTAMIDG 157
Query: 306 YSQRGHPLKALELFTDRNWAGI-LPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
Y + G +A LF D GI N +G +HG +VK G+
Sbjct: 158 YLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-G 216
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
N V ++L+ YA+C ++ A F+ +KDV+SW + IS C++ G +A+ MF M
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
+ F P+ TV +L AC+ AL G +H+ +K ++ ++VGT+L++ YAKCG+
Sbjct: 277 NHWF-LPNEFTVCSILKACSEEKALRFGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKCGE 334
Query: 485 AKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAA 544
R VFDGM +N VTW+++I+ + +G G +I+LFR M + N + S+L A
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 545 CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
C G + G L H + + ++ + +V L + G ++A + + ++P + VS
Sbjct: 395 CGSVGALLLGKEL-HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS 453
Query: 605 VFGAYLHGC 613
+ A + GC
Sbjct: 454 -WTAMISGC 461
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 170/631 (26%), Positives = 284/631 (45%), Gaps = 100/631 (15%)
Query: 149 HCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQ---- 203
H IKSG + N LV+ YSK G + AR VFDE+ ERNV SW ++ AYV+
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 204 -----------------------------NDCAVEGLRLFNRMREGFVDG---NDFTVGS 231
+ C E + +F M D +DFTV +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVF------- 284
+V KL ++ G+ +HG +VK+G F +SL++MY KCG + +F
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 285 -------------------DEMLT---SDDEL-DLVSWTAMIVGYSQRGHPLKALELFTD 321
D+ L+ + EL D +SW +I GY+Q G+ +AL++
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKC-- 379
G+ + +G +H V+K G + N V + ++D+Y KC
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 380 -------HLVS----------------------DARYVFETTVQKDVVSWNSFISGCAQS 410
HL+ +A+ +F++ +K++V W + G
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 411 GSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIY 470
LE+ + + + PD++ +V VL AC+ + G IH +L+ G++
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 471 VGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE 530
V TA ++ Y+KCG+ + A +FD E++ V ++AMI+G G S F DM +
Sbjct: 431 V-TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGG 489
Query: 531 CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA 590
+P+E+ F ++L+AC H G+V EG + F M N P HY CM+DL +A L +A
Sbjct: 490 FKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKA 549
Query: 591 LDFIDKM-PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYAS 649
++ ++ + V+ + GA+L+ C + EL + ++L + Y+ ++N YAS
Sbjct: 550 IELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYAS 609
Query: 650 DGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
GRW ++++R ++ + L GCS ID
Sbjct: 610 SGRWDEMQRIRHQMRGKELEIFSGCSWANID 640
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 54/323 (16%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGH------------ 175
F VL S L+ + +H V+K+G S+ FV +G+VD Y KCG+
Sbjct: 263 FGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 176 -------------------VCSARKVFDEIAERNVVSWTSMFVAYV---QNDCAVEGLRL 213
+ A+++FD ++E+N+V WT+MF+ Y+ Q D +E R
Sbjct: 323 FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARA 382
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
F D + S++ AC+ + GK +HG+ +++GI ++ L T+ ++MY K
Sbjct: 383 FIANETNTPDS--LVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
CG++ A ++FD S E D V + AMI G + GH K+ + F D G P+
Sbjct: 441 CGNVEYAERIFD----SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEIT 496
Query: 334 XXXXXXXXXXXXXXXMGMLLHG------LVVKCGLFDNTPVRNALIDMYAKCHLVSDARY 387
G++L G ++ + T +ID+Y K + + A
Sbjct: 497 FMALLSACRHR-----GLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIE 551
Query: 388 VFE--TTVQKDVVSWNSFISGCA 408
+ E V+KD V +F++ C+
Sbjct: 552 LMEGIDQVEKDAVILGAFLNACS 574
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFI----- 404
G L H +K G N L+++Y+K L+ +AR VF+ ++++V SWN+ I
Sbjct: 7 GFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66
Query: 405 ---------------------------SGCAQS-GSAYEALEMFQRMRSESFSP--PDAV 434
SG A++ G EA+EMF M + D
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 435 TVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDG 494
TV ++ A L + G +H +K G V ++L++ Y+KCG K +F+G
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAV-SSLIHMYSKCGKFKEVCNIFNG 185
Query: 495 MGEK--NAVTWSAMISGYGMQGDGVGSIALF 523
+ ++V +AMI+ Y +GD ++++F
Sbjct: 186 SCVEFVDSVARNAMIAAYCREGDIDKALSVF 216
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
C K G LH H +KSG + + + L+N+Y K G + +AR VFDEML E +
Sbjct: 3 CLKDGFLH-----HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEML----ERN 53
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRN 323
+ SW A+I Y + + +A ELF N
Sbjct: 54 VYSWNAVIAAYVKFNNVKEARELFESDN 81
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 246/474 (51%), Gaps = 44/474 (9%)
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
GK +H ++K+G + ++ LL +++KCG + AR+VFDE+ + L ++ MI
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDEL----PKPTLSAYNYMIS 108
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXX-----XMGMLLHGLVVK 359
GY + G + L L +++G + + L+H ++K
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFET---------------------------- 391
C + + + AL+D Y K + AR VFET
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 392 ---TVQKDVVSWNSFISGCAQSG-SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLG 447
T KD+V +N+ + G ++SG +A +++M+ M+ F P + T V+ AC+ L
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHP-NISTFASVIGACSVLT 287
Query: 448 ALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMI 507
+ +G +HA +K G V I +G++LL+ YAKCG AR VFD M EKN +W++MI
Sbjct: 288 SHEVGQQVHAQIMKSG-VYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 508 SGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNF 567
GYG G+ ++ LF M + EPN V F L+ACSHSG+V +G +F M R+ +
Sbjct: 347 DGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSM 406
Query: 568 VPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIR 627
P M+HYAC+VDL+ RAG+L +A +F MP +P ++ A L C LH EL +A
Sbjct: 407 KPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAAS 466
Query: 628 RMLELHPDQ-ACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+ +L+ D+ Y+ +SN+YAS+ +W V ++RE++K+R ++K G S D
Sbjct: 467 ELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 162/325 (49%), Gaps = 47/325 (14%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
KK HA +I GF D KLL L+ G L +AR++FD LP P L ++ M+ Y +
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAAR-----LHCHVIKSGPS 158
L +++ Y+ G D S+VLKA + + R +H +IK
Sbjct: 114 GLVKELLLLVQRMSYS-GEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 159 -DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQ-----------NDC 206
D ++ LVD Y K G + SAR VF+ + + NVV TSM Y+ N
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 207 AVEGLRLFNRMREGF----------VD-----------GNDFTVGSLVTACTKLGSLHQG 245
V+ + ++N M EGF VD N T S++ AC+ L S G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 246 KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
+ VH ++KSG++ + + +SLL+MY KCG I DAR+VFD+M E ++ SWT+MI G
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM----QEKNVFSWTSMIDG 348
Query: 306 YSQRGHPLKALELFTDRNWAGILPN 330
Y + G+P +ALELFT I PN
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPN 373
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 191/404 (47%), Gaps = 36/404 (8%)
Query: 147 RLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
++H +IK+G D + L+ + KCG + AR+VFDE+ + + ++ M Y+++
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHG 114
Query: 206 CAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL-----HQGKWVHGYVVKSGIHVN 260
E L L RM + +T+ ++ A GS + VH ++K + ++
Sbjct: 115 LVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELD 174
Query: 261 SFLATSLLNMYVKCGDIGDARKVFD---------------------------EMLTSDDE 293
L T+L++ YVK G + AR VF+ E+ +
Sbjct: 175 DVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKV 234
Query: 294 LDLVSWTAMIVGYSQRGHPLK-ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGML 352
D+V + AM+ G+S+ G K +++++ AG PN +G
Sbjct: 235 KDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQ 294
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS 412
+H ++K G++ + + ++L+DMYAKC ++DAR VF+ +K+V SW S I G ++G+
Sbjct: 295 VHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGN 354
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
EALE+F RM+ E P+ VT +G LSAC+ G + G I +D + +
Sbjct: 355 PEEALELFTRMK-EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGD 515
+++ + GD A M E+ ++ W+A++S + G+
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGN 457
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 252/514 (49%), Gaps = 46/514 (8%)
Query: 148 LHCHVIKSGPSD-GFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDC 206
LH H++ SG + + LV Y +CG V ARKVFDE+ +R++ M A +N
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 207 AVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATS 266
E L F M + + + F V SL+ A L GK +H V+K ++F+ +S
Sbjct: 98 YQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSS 157
Query: 267 LLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG 326
L++MY K G++G+ARKVF ++ E DLV + AMI GY+ +AL L D G
Sbjct: 158 LIDMYSKFGEVGNARKVFSDL----GEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 327 ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDAR 386
I P+ NALI ++
Sbjct: 214 IKPDVITW-----------------------------------NALISGFSHMRNEEKVS 238
Query: 387 YVFETT----VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSA 442
+ E + DVVSW S ISG + +A + F++M + P A T++ +L A
Sbjct: 239 EILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSA-TIITLLPA 297
Query: 443 CASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVT 502
C +L + G IH +++ GL +V +ALL+ Y KCG A ++F +K VT
Sbjct: 298 CTTLAYMKHGKEIHGYSVVTGLEDHG-FVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Query: 503 WSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMC 562
+++MI Y G ++ LF M + + + FT++L ACSH+G+ G LF +M
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Query: 563 RELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELG 622
+ VP ++HYACMVDLL RAG L EA + I M ++P + V+GA L C H EL
Sbjct: 417 NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Query: 623 EVAIRRMLELHPDQACYYVLVSNLYASDGRWGMV 656
+A + + EL P+ + +L+++LYA+ G W V
Sbjct: 477 RIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 183/411 (44%), Gaps = 42/411 (10%)
Query: 50 FHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNL 105
HA L+ G T KL++ Y G + AR++FD +P ++ M+ N
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 106 HSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK-SGPSDGFVLN 164
+ + + F+ Y G D + +LKA L D +HC V+K S SD F+++
Sbjct: 98 YQESLDFFR-EMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVS 156
Query: 165 GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDG 224
L+D YSK G V +ARKVF ++ E+++V + +M Y N A E L L M+ +
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKP 216
Query: 225 NDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVF 284
+ T +L++ + + ++ V+ L L+ Y
Sbjct: 217 DVITWNALISGFSHM--------------RNEEKVSEILELMCLDGY------------- 249
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXX 344
+ D+VSWT++I G KA + F G+ PN
Sbjct: 250 --------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 345 XXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFI 404
G +HG V GL D+ VR+AL+DMY KC +S+A +F T +K V++NS I
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMI 361
Query: 405 SGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
A G A +A+E+F +M + D +T +L+AC+ G LG ++
Sbjct: 362 FCYANHGLADKAVELFDQMEATG-EKLDHLTFTAILTACSHAGLTDLGQNL 411
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G +LH +V G+ T + L+ Y +C V DAR VF+ ++D+ I CA+
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
+G E+L+ F+ M + DA V +L A +L G IH LK S
Sbjct: 95 NGYYQESLDFFREMYKDGLKL-DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYES-DA 152
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE 529
++ ++L++ Y+K G+ +AR VF +GE++ V ++AMISGY ++ L +DM
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 530 ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKE 589
+P+ + + ++++ SH + S + +MC + + P + + ++ L ++
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEK 271
Query: 590 ALDFIDKM 597
A D +M
Sbjct: 272 AFDAFKQM 279
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 242/467 (51%), Gaps = 18/467 (3%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD----ARKVFDE 286
SL+ A + ++ Q K H + G+H N++ + LL ++ ++ A +FD
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 287 MLTSDDELDLVSWTAMIVGYSQRGHP---LKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
+ + + MI S+ P L+ L I P+
Sbjct: 73 IEIPNS----FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 344 XXXXXMGMLLHGLVVKCGLF-DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
+G +H VVK G+F ++ V+ ++ +Y + L+ DAR VF+ Q DVV W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
++G + G E LE+F+ M + P D +V L+ACA +GAL G IH F K
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEP-DEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIAL 522
+ ++VGTAL++ YAKCG ++A VF + +N +W+A+I GY G ++
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTC 307
Query: 523 FRDMLKEE-CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLL 581
+ +E+ +P+ VV VLAAC+H G + EG + M P +HY+C+VDL+
Sbjct: 308 LERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 582 ARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP----DQA 637
RAG L +AL+ I+KMP++P SV+GA L+GC H ELGE+A++ +L+L ++
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEE 427
Query: 638 CYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLNDT 684
V +SN+Y S R +VR MI+QRG+ K PG S++E+D N T
Sbjct: 428 AALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVT 474
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 182/399 (45%), Gaps = 46/399 (11%)
Query: 38 SPICKNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLR----HARRLFDHLPSPN 89
S C + +K H+ I+HG +T KLL+ + L +A +FD + PN
Sbjct: 18 SQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPN 77
Query: 90 LHSFKAMLRW------------YFL---NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLK 134
+ M+R YFL D+ Y LT FH L+V LK
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSY-LT------FHFLIV--ACLK 128
Query: 135 ACSELRDVVQAARLHCHVIKSGP--SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVV 192
AC ++HC V+K+G SD V G++ Y + + ARKVFDEI + +VV
Sbjct: 129 ACF----FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 193 SWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYV 252
W + YV+ EGL +F M ++ ++F+V + +TAC ++G+L QGKW+H +V
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 253 -VKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
KS I + F+ T+L++MY KCG I A +VF ++ ++ SW A+I GY+ G+
Sbjct: 245 KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRR----NVFSWAALIGGYAAYGY 300
Query: 312 PLKALELFTD-RNWAGILPNXXXXXXXXXXXXXXXXXXMGM-LLHGLVVKCGLFDNTPVR 369
KA+ GI P+ G +L + + +
Sbjct: 301 AKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY 360
Query: 370 NALIDMYAKCHLVSDARYVFETTVQKDVVS-WNSFISGC 407
+ ++D+ + + DA + E K + S W + ++GC
Sbjct: 361 SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGC 399
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 258/542 (47%), Gaps = 82/542 (15%)
Query: 155 SGPSDG---FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAV-EG 210
+ PSD F LN ++ + G + A +VF + +N ++W S+ + ++ + E
Sbjct: 53 TKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEA 112
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
+LF+ + E ++F +L+
Sbjct: 113 HQLFDEIPEP---------------------------------------DTFSYNIMLSC 133
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF------TDRNW 324
YV+ + A+ FD M D SW MI GY++RG KA ELF + +W
Sbjct: 134 YVRNVNFEKAQSFFDRMPFKD----AASWNTMITGYARRGEMEKARELFYSMMEKNEVSW 189
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG-LFDNTPVR-----NALIDMYAK 378
++ G + G + K F PVR A+I Y K
Sbjct: 190 NAMIS--------------------GYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMK 229
Query: 379 CHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVV 437
V A +F + TV K++V+WN+ ISG ++ + L++F+ M E P ++ +
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP-NSSGLS 288
Query: 438 GVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE 497
L C+ L AL LG IH K L + + T+L++ Y KCG+ A +F+ M +
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCN-DVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 498 KNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRL 557
K+ V W+AMISGY G+ ++ LFR+M+ + P+ + F +VL AC+H+G+V G
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 558 FHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHS 617
F M R+ P HY CMVDLL RAG L+EAL I MP +P +VFG L C +H
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHK 467
Query: 618 EFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
EL E A ++L+L+ A YV ++N+YAS RW V +VR+ +K+ + KVPG S +
Sbjct: 468 NVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Query: 678 EI 679
EI
Sbjct: 528 EI 529
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 144/308 (46%), Gaps = 37/308 (12%)
Query: 43 NID-TVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYF 101
+ID ++ FH + ++ L+ + + A +LFD +P P+ S+ ML Y
Sbjct: 76 DIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYV 135
Query: 102 LNNLHSDVVSFYH-------------LTRYTL--------GFFHDL-----VVFSIVLKA 135
N SF+ +T Y F+ + V ++ ++
Sbjct: 136 RNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISG 195
Query: 136 CSELRDVVQAARLHCHVIKSGPSDGFV-LNGLVDAYSKCGHVCSARKVF-DEIAERNVVS 193
E D+ +A+ H K P G V ++ Y K V A +F D +N+V+
Sbjct: 196 YIECGDLEKAS----HFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 194 WTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVV 253
W +M YV+N +GL+LF M E + N + S + C++L +L G+ +H V
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 254 KSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPL 313
KS + + TSL++MY KCG++GDA K+F+ M + D+V+W AMI GY+Q G+
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM----KKKDVVAWNAMISGYAQHGNAD 367
Query: 314 KALELFTD 321
KAL LF +
Sbjct: 368 KALCLFRE 375
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLF-DHLPSPNLHSFKAMLRW 99
C +++ F V G T +++ Y + A +F D + NL ++ AM+
Sbjct: 199 CGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 258
Query: 100 YFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGP-S 158
Y N+ D + + G + S L CSEL + ++H V KS +
Sbjct: 259 YVENSRPEDGLKLFR-AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN 317
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR 218
D L L+ Y KCG + A K+F+ + +++VV+W +M Y Q+ A + L LF M
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQG-KWVHGYVVKSGIHVNSFLATSLLNMYVKCGDI 277
+ + + T +++ AC G ++ G + V + T ++++ + G +
Sbjct: 378 DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 278 GDARKVFDEM 287
+A K+ M
Sbjct: 438 EEALKLIRSM 447
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 387 YVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
Y+ + + Q + N I+ C +SG AL +F MR+++ +++ ++G+ + +
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSL-LIGISKDPSRM 109
Query: 447 GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAM 506
+ A L D + + +L+ Y + + + A+ FD M K+A +W+ M
Sbjct: 110 --------MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTM 161
Query: 507 ISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELN 566
I+GY +G+ + LF M+ E NEV + ++++ G + + S F ++
Sbjct: 162 ITGYARRGEMEKARELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFF-----KVA 212
Query: 567 FVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAI 626
V + + M+ +A ++ A M V + + A + G +S E G
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 627 RRMLE 631
R MLE
Sbjct: 273 RAMLE 277
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 184/657 (28%), Positives = 300/657 (45%), Gaps = 67/657 (10%)
Query: 11 SSKSLI-QFRSLSSYIAFTLPHPPTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLY 69
SSK+L+ Q R + S++ P PP L+ + + Y
Sbjct: 72 SSKALVVQARKVQSHLVTFSPLPPIFLLN-------------------------RAIEAY 106
Query: 70 ASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVF 129
G + AR LF+ +P + S+ A++ N + +V + G F
Sbjct: 107 GKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD-GVRATETSF 165
Query: 130 SIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLN-GLVDAYSKCGHVCSARKVFDEIAE 188
+ VLK+C + D+ +LHC V+K G S L +VD Y KC + AR+VFDEI
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWV 248
+ VSW + Y++ E + +F +M E V + TV S++ AC++ +L GK +
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 249 HGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQ 308
H VK + ++ ++TS+ +MYVKC + AR+VFD+ + D L SWT+ + GY+
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKD----LKSWTSAMSGYAM 341
Query: 309 RGHPLKALELFT---DRN---WAGILP-------------------------NXXXXXXX 337
G +A ELF +RN W +L +
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWI 401
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQ-KD 396
MG HG + + G N V NAL+DMY KC + A F + +D
Sbjct: 402 LNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRD 461
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
VSWN+ ++G A+ G + +AL F+ M+ E+ P T+ +L+ CA++ AL LG +IH
Sbjct: 462 EVSWNALLTGVARVGRSEQALSFFEGMQVEA--KPSKYTLATLLAGCANIPALNLGKAIH 519
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDG 516
F ++DG + + A+++ Y+KC A VF ++ + W+++I G G
Sbjct: 520 GFLIRDGY-KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS 578
Query: 517 VGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYAC 576
LF + E +P+ V F +L AC G V G + F M + + P ++HY C
Sbjct: 579 KEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDC 638
Query: 577 MVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELH 633
M++L + G L + +F+ MP P + + C + +LG A +R++ H
Sbjct: 639 MIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDH 695
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/560 (26%), Positives = 251/560 (44%), Gaps = 71/560 (12%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEI 186
++ + ++CS VVQA ++ H++ P F+LN ++AY KCG V AR++F+E+
Sbjct: 63 LYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEM 122
Query: 187 AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
ER+ SW ++ A QN + E R+F RM V + + ++ +C + L +
Sbjct: 123 PERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLR 182
Query: 247 WVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+H VVK G N L TS++++Y KC + DAR+VFDE++ D VSW ++ Y
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD----VSWNVIVRRY 238
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
+ G +A+ +F + P +G ++H + VK + +T
Sbjct: 239 LEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADT 298
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS- 425
V ++ DMY KC + AR VF+ T KD+ SW S +SG A SG EA E+F M
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER 358
Query: 426 -----------------------------ESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
+ D VT+V +L+ C+ + + +G H
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAH 418
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE-KNAVTWSAMISGYGMQGD 515
F + G ++ V ALL+ Y KCG +SA + F M E ++ V+W+A+++G G
Sbjct: 419 GFIYRHGY-DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGR 477
Query: 516 GVGSIALFRDMLKEECEPNEVVFTSVLAACS-----------HSGMVGEGSRL------- 557
+++ F M + E +P++ ++LA C+ H ++ +G ++
Sbjct: 478 SEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGA 536
Query: 558 ---FHMMCRELNFVPSMKHYACMVDLL---------ARAGNLKEALD---FIDKMPVQPG 602
+ CR ++ + A DL+ R G KE + ++ V+P
Sbjct: 537 MVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPD 596
Query: 603 VSVFGAYLHGCGLHSEFELG 622
F L C ELG
Sbjct: 597 HVTFLGILQACIREGHVELG 616
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 183/662 (27%), Positives = 299/662 (45%), Gaps = 140/662 (21%)
Query: 29 LPHPPTLYLSPICK--NIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLP 86
+P P L + +CK I +K L T +++ Y G +R AR LFD +
Sbjct: 46 VPQPEWL-IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVD 104
Query: 87 S-PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQA 145
S N+ ++ AM+ Y L S +S + F ++ ++V
Sbjct: 105 SRKNVVTWTAMVSGY----LRSKQLSIAEM------LFQEMPERNVV------------- 141
Query: 146 ARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
N ++D Y++ G + A ++FDE+ ERN+VSW SM A VQ
Sbjct: 142 ----------------SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRG 185
Query: 206 CAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA 264
E + LF RM R V W
Sbjct: 186 RIDEAMNLFERMPRRDVVS-----------------------W----------------- 205
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
T++++ K G + +AR++FD M E +++SW AMI GY+Q +A +LF
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQ---- 257
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
++P M CGLFD P
Sbjct: 258 --VMPERDFASWNTMITGFIRNREMNKA-------CGLFDRMP----------------- 291
Query: 385 ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
+K+V+SW + I+G ++ EAL +F +M + P+ T V +LSAC+
Sbjct: 292 ---------EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 445 SLGALPLGSSIHAFALKDGLVSCSIY-----VGTALLNFYAKCGDAKSARMVFDG--MGE 497
L L G IH L+S S++ V +ALLN Y+K G+ +AR +FD + +
Sbjct: 343 DLAGLVEGQQIHQ------LISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 498 KNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRL 557
++ ++W++MI+ Y G G +I ++ M K +P+ V + ++L ACSH+G+V +G
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 558 FHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHS 617
F + R+ + +HY C+VDL RAG LK+ +FI+ + S +GA L C +H+
Sbjct: 457 FKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHN 516
Query: 618 EFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
E + + ++++LE D A YVL+SN+YA++G+ ++R +K++GL K PGCS V
Sbjct: 517 EVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Query: 678 EI 679
++
Sbjct: 577 KV 578
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 238/463 (51%), Gaps = 18/463 (3%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD----ARKVFDE 286
SL+ A + ++ Q K H + G+H N++ + LL ++ ++ A +FD
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 287 MLTSDDELDLVSWTAMIVGYSQRGHP---LKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
+ + + MI S+ P L+ L I P+
Sbjct: 73 IEIPNS----FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 344 XXXXXMGMLLHGLVVKCGLF-DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
+G +H VVK G+F + V+ ++ +Y + L+ DAR VF+ Q DVV W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
++G + G E LE+F+ M P D +V L+ACA +GAL G IH F K
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEP-DEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIAL 522
+ ++VGTAL++ YAKCG ++A VF+ + +N +W+A+I GY G +
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTC 307
Query: 523 FRDMLKEE-CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLL 581
+ +E+ +P+ VV VLAAC+H G + EG + M P +HY+C+VDL+
Sbjct: 308 LDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 582 ARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP----DQA 637
RAG L +ALD I+KMP++P SV+GA L+GC H ELGE+A++ +L+L ++
Sbjct: 368 CRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEE 427
Query: 638 CYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
V +SN+Y S R +VR MI+QRG+ K PG SL+E+D
Sbjct: 428 AALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 185/400 (46%), Gaps = 48/400 (12%)
Query: 38 SPICKNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLR----HARRLFDHLPSPN 89
S C + +K H+ I+HG +T KLL+ + L +A +FD + PN
Sbjct: 18 SQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPN 77
Query: 90 LHSFKAMLRW------------YFL---NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLK 134
+ M+R YFL D+ Y LT FH L+V LK
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSY-LT------FHFLIV--ACLK 128
Query: 135 ACSELRDVVQAARLHCHVIKSGP--SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVV 192
AC ++HC V+K+G SDG V G++ Y + + ARKVFDEI + +VV
Sbjct: 129 ACF----FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 193 SWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYV 252
W + YV+ EGL +F M ++ ++F+V + +TAC ++G+L QGKW+H +V
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 253 VKSG-IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
K I + F+ T+L++MY KCG I A +VF+++ ++ SW A+I GY+ G+
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRR----NVFSWAALIGGYAAYGY 300
Query: 312 PLKALELFTDR--NWAGILPNXXXXXXXXXXXXXXXXXXMG-MLLHGLVVKCGLFDNTPV 368
KA DR GI P+ G +L + + G+
Sbjct: 301 AKKATTCL-DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEH 359
Query: 369 RNALIDMYAKCHLVSDARYVFETTVQKDVVS-WNSFISGC 407
+ ++D+ + + DA + E K + S W + ++GC
Sbjct: 360 YSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGC 399
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 243/493 (49%), Gaps = 43/493 (8%)
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGD---IG 278
++ N + S + C+K L Q +H ++K+G+ +S+ T L+ + +
Sbjct: 10 LEHNLYETMSCLQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXX 338
A+ VFD D D W MI G+S P ++L L+ + N
Sbjct: 67 YAQIVFDGF----DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 339 XXXXXXXXXXMGMLLHGLVVKCG--------------------------LFDNTPVR--- 369
+H + K G LFD P
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 370 --NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES 427
N++I Y K + A +F +K+ +SW + ISG Q+ EAL++F M++
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKS 487
P D V++ LSACA LGAL G IH++ K + S+ +G L++ YAKCG+ +
Sbjct: 243 VEP-DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEE 300
Query: 488 ARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSH 547
A VF + +K+ W+A+ISGY G G +I+ F +M K +PN + FT+VL ACS+
Sbjct: 301 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360
Query: 548 SGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFG 607
+G+V EG +F+ M R+ N P+++HY C+VDLL RAG L EA FI +MP++P ++G
Sbjct: 361 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 420
Query: 608 AYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRG 667
A L C +H ELGE ++ + P YV +N++A D +W + R ++K++G
Sbjct: 421 ALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQG 480
Query: 668 LNKVPGCSLVEID 680
+ KVPGCS + ++
Sbjct: 481 VAKVPGCSTISLE 493
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 197/425 (46%), Gaps = 48/425 (11%)
Query: 26 AFTLPHP--PTLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASF-------GFLR 76
+F+L H T+ C + +K+ HA ++ G D+ ++ + SF FL
Sbjct: 7 SFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 77 HARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKAC 136
+A+ +FD P+ + M+R + ++ + Y + H+ F +LKAC
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCS-SAPHNAYTFPSLLKAC 125
Query: 137 SELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEI--------- 186
S L + ++H + K G +D + +N L+++Y+ G+ A +FD I
Sbjct: 126 SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 187 ----------------------AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDG 224
AE+N +SWT+M YVQ D E L+LF+ M+ V+
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 225 NDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVF 284
++ ++ + ++AC +LG+L QGKW+H Y+ K+ I ++S L L++MY KCG++ +A +VF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXX 344
+ + + +WTA+I GY+ GH +A+ F + GI PN
Sbjct: 306 KNI----KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361
Query: 345 XXXXMGMLL-HGLVVKCGLFDNTPVRNALIDMYAKCHLVSDA-RYVFETTVQKDVVSWNS 402
G L+ + + L ++D+ + L+ +A R++ E ++ + V W +
Sbjct: 362 GLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 403 FISGC 407
+ C
Sbjct: 422 LLKAC 426
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 179/439 (40%), Gaps = 41/439 (9%)
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVD---AYSKCGHVCSA 179
H+L L+ CS+ ++ Q +H ++K+G D + + + + + + A
Sbjct: 12 HNLYETMSCLQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYA 68
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
+ VFD + W M + +D L L+ RM N +T SL+ AC+ L
Sbjct: 69 QIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNL 128
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD------- 292
+ + +H + K G + + SL+N Y G+ A +FD + DD
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVI 188
Query: 293 --------------------ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXX 332
E + +SWT MI GY Q +AL+LF + + + P+
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 333 XXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETT 392
G +H + K + ++ + LIDMYAKC + +A VF+
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 393 VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
+K V +W + ISG A G EA+ F M+ P+ +T VL+AC+ G + G
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIK-PNVITFTAVLTACSYTGLVEEG 367
Query: 453 SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAMISGYG 511
I +D + +I +++ + G A+ M K NAV W A++
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 512 MQ-----GDGVGSIALFRD 525
+ G+ +G I + D
Sbjct: 428 IHKNIELGEEIGEILIAID 446
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 262/506 (51%), Gaps = 20/506 (3%)
Query: 179 ARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTK 238
A +FDE+ +R++ S S +++++ + L LF ++ D + T ++ AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 239 LGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVS 298
L G+ VH ++K G + T+L++MY K G + D+ +VF+ S +E DLVS
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFE----SVEEKDLVS 152
Query: 299 WTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
W A++ G+ + G +AL +F + + G +H +VV
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFET-TVQKDVVSWNSFISGCAQSGSAYEAL 417
G D + A+I Y+ L+++A V+ + V D V NS ISGC ++ + EA
Sbjct: 213 VTGR-DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
+ R R P+ + L+ C+ L +G IH AL++G VS S + L++
Sbjct: 272 LLMSRQR------PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS-KLCNGLMD 324
Query: 478 FYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECE--PNE 535
Y KCG AR +F + K+ V+W++MI Y + GDGV ++ +FR+M +E PN
Sbjct: 325 MYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNS 384
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID 595
V F V++AC+H+G+V EG F MM + VP +HY C +D+L++AG +E ++
Sbjct: 385 VTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVE 444
Query: 596 KMPVQPGVS----VFGAYLHGCGLHSEFELGEVAIRRML-ELHPDQACYYVLVSNLYASD 650
+M S ++ A L C L+ + GE RR++ E P+ A YVLVSN YA+
Sbjct: 445 RMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAM 504
Query: 651 GRWGMVKQVREMIKQRGLNKVPGCSL 676
G+W +V+++R +K +GL K G SL
Sbjct: 505 GKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 219/476 (46%), Gaps = 19/476 (3%)
Query: 74 FLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS-FYHLTRYTLGFFHDLVVFSIV 132
F HA LFD LP +L S + L + + +D ++ F + R + F+ V
Sbjct: 33 FATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSH--TFTPV 90
Query: 133 LKACSELRDVVQAARLHCHVIKSGPSDGFV-LNGLVDAYSKCGHVCSARKVFDEIAERNV 191
L ACS L ++H +IK G G + L+D YSK GH+ + +VF+ + E+++
Sbjct: 91 LGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDL 150
Query: 192 VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGY 251
VSW ++ +++N E L +F M V+ ++FT+ S+V C L L QGK VH
Sbjct: 151 VSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
VV +G + L T++++ Y G I +A KV++ + DE+ L ++I G + +
Sbjct: 211 VVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML---NSLISGCIRNRN 266
Query: 312 PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA 371
+A L + + PN +G +H + ++ G ++ + N
Sbjct: 267 YKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNG 321
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE-SFSP 430
L+DMY KC + AR +F K VVSW S I A +G +ALE+F+ M E S
Sbjct: 322 LMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVL 381
Query: 431 PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
P++VT + V+SACA G + G + + ++ +K G+ +
Sbjct: 382 PNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWR 441
Query: 491 VFDGMGEKN-----AVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
+ + M E + W A++S + D + R +++E N ++ V
Sbjct: 442 LVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLV 497
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 194/422 (45%), Gaps = 41/422 (9%)
Query: 269 NMYVKCGDIGD----ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
N+ ++C I + A +FDE+ + DL S + + + + G+P L LF +
Sbjct: 22 NLVLRCVFIRNFATHADHLFDEL----PQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHR 77
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAK-CHLVS 383
A + G +H L++K G T + ALIDMY+K HLV
Sbjct: 78 ASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVD 137
Query: 384 DARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSAC 443
R VFE+ +KD+VSWN+ +SG ++G EAL +F M E + T+ V+ C
Sbjct: 138 SVR-VFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE-FTLSSVVKTC 195
Query: 444 ASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVT 502
ASL L G +HA + G + +GTA+++FY+ G A V++ + + V
Sbjct: 196 ASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 503 WSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMC 562
+++ISG + + +L PN V +S LA CS + + G ++ H +
Sbjct: 254 LNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQI-HCVA 307
Query: 563 RELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV---SVFGAY-LHGCGLHSE 618
FV K ++D+ + G + +A +P + V S+ AY ++G G+ +
Sbjct: 308 LRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKA- 366
Query: 619 FELGEVAIRRMLE----LHPDQACYYVLVSNLYASDGRWGMVKQVRE---MIKQRGLNKV 671
E+ R M E + P+ + V++S + G+VK+ +E M+K++ V
Sbjct: 367 LEI----FREMCEEGSGVLPNSVTFLVVIS----ACAHAGLVKEGKECFGMMKEK-YRLV 417
Query: 672 PG 673
PG
Sbjct: 418 PG 419
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/610 (28%), Positives = 287/610 (47%), Gaps = 49/610 (8%)
Query: 113 YHLTRYTLGFFHDLVVFSI--VLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDA 169
+ L RY G H+ V++S +L C + V +LH H I SG D ++ LV
Sbjct: 69 FSLLRYQSGS-HEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTF 127
Query: 170 YSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTV 229
YS + A+ + + + + W + +Y++N E + ++ RM + ++FT
Sbjct: 128 YSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTY 187
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
S++ AC L G+ VHG + S N ++ +L++MY + G + AR++FD M
Sbjct: 188 PSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM-- 245
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDR------------------------NWA 325
E D VSW A+I Y+ +A +L DR N+
Sbjct: 246 --SERDAVSWNAIINCYTSEEKLGEAFKLL-DRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 326 GILP------------NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF--DNTPVRNA 371
G L G + H LV++ F D VRN+
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS 362
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
LI MY++C + A VF+ + +WNS ISG A + + E + + M F P
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHP- 421
Query: 432 DAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
+ +T+ +L A +G L G H + L+ + + +L++ YAK G+ +A+ V
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV 481
Query: 492 FDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMV 551
FD M +++ VT++++I GYG G G ++A F+DM + +P+ V +VL+ACSHS +V
Sbjct: 482 FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLV 541
Query: 552 GEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLH 611
EG LF M ++HY+CMVDL RAG L +A D +P +P ++ L
Sbjct: 542 REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLK 601
Query: 612 GCGLHSEFELGEVAIRR-MLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNK 670
C +H +GE A + +LE P+ +Y+L++++YA G W + V+ ++ G+ K
Sbjct: 602 ACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Query: 671 VPGCSLVEID 680
+L+E D
Sbjct: 662 AHEFALMETD 671
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 211/498 (42%), Gaps = 69/498 (13%)
Query: 48 KKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
++ HA I G D+ KL++ Y++F L A+ + ++ + + ++ Y N
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHV-IKSGPSDGFV 162
+ VS Y + G D + V+KAC+ L D +H + + S + +V
Sbjct: 163 KRFQESVSVYK-RMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
N L+ Y + G V AR++FD ++ER+ VSW ++ Y + E +L +RM V
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 223 DGNDFT--------------VGSL---------------------VTACTKLGSLHQGKW 247
+ + T +G+L + AC+ +G+L GK
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 248 VHGYVVKSG--IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
H V++S H + SL+ MY +C D+ A VF ++ + L +W ++I G
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN----SLSTWNSIISG 397
Query: 306 YSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDN 365
++ + L + +G PN +G L HG C +
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPN-----HITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 366 TPVR------NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
+ N+L+DMYAK + A+ VF++ ++D V++ S I G + G AL
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAW 512
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI-----HAFALKDGLVSCSIYVGTA 474
F+ M S PD VT+V VLSAC+ + G + H F ++ L S
Sbjct: 513 FKDM-DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYS-----C 566
Query: 475 LLNFYAKCGDAKSARMVF 492
+++ Y + G AR +F
Sbjct: 567 MVDLYCRAGYLDKARDIF 584
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 23/232 (9%)
Query: 386 RYVFETTVQKD-----VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV-TVVGV 439
R + ET+ D V +NSF C G YEA F +R +S S + + +
Sbjct: 31 RPISETSKTHDDESVPQVLFNSF-RHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASL 89
Query: 440 LSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN 499
LS C G +HA + GL S+ V L+ FY+ A+ + + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLV-PKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 500 AVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS-----HSGMVGEG 554
+ W+ +I Y S+++++ M+ + +E + SV+ AC+ G V G
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 555 SRLFHMMCRELNFVPSMKHYAC--MVDLLARAGNLKEALDFIDKMPVQPGVS 604
S + N Y C ++ + R G + A D+M + VS
Sbjct: 209 S--IEVSSHRCNL------YVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/610 (28%), Positives = 287/610 (47%), Gaps = 49/610 (8%)
Query: 113 YHLTRYTLGFFHDLVVFSI--VLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDA 169
+ L RY G H+ V++S +L C + V +LH H I SG D ++ LV
Sbjct: 69 FSLLRYQSGS-HEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTF 127
Query: 170 YSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTV 229
YS + A+ + + + + W + +Y++N E + ++ RM + ++FT
Sbjct: 128 YSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTY 187
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
S++ AC L G+ VHG + S N ++ +L++MY + G + AR++FD M
Sbjct: 188 PSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM-- 245
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDR------------------------NWA 325
E D VSW A+I Y+ +A +L DR N+
Sbjct: 246 --SERDAVSWNAIINCYTSEEKLGEAFKLL-DRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 326 GILP------------NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF--DNTPVRNA 371
G L G + H LV++ F D VRN+
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS 362
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
LI MY++C + A VF+ + +WNS ISG A + + E + + M F P
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHP- 421
Query: 432 DAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
+ +T+ +L A +G L G H + L+ + + +L++ YAK G+ +A+ V
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV 481
Query: 492 FDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMV 551
FD M +++ VT++++I GYG G G ++A F+DM + +P+ V +VL+ACSHS +V
Sbjct: 482 FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLV 541
Query: 552 GEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLH 611
EG LF M ++HY+CMVDL RAG L +A D +P +P ++ L
Sbjct: 542 REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLK 601
Query: 612 GCGLHSEFELGEVAIRR-MLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNK 670
C +H +GE A + +LE P+ +Y+L++++YA G W + V+ ++ G+ K
Sbjct: 602 ACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Query: 671 VPGCSLVEID 680
+L+E D
Sbjct: 662 AHEFALMETD 671
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 211/498 (42%), Gaps = 69/498 (13%)
Query: 48 KKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
++ HA I G D+ KL++ Y++F L A+ + ++ + + ++ Y N
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHV-IKSGPSDGFV 162
+ VS Y + G D + V+KAC+ L D +H + + S + +V
Sbjct: 163 KRFQESVSVYK-RMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
N L+ Y + G V AR++FD ++ER+ VSW ++ Y + E +L +RM V
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 223 DGNDFT--------------VGSL---------------------VTACTKLGSLHQGKW 247
+ + T +G+L + AC+ +G+L GK
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 248 VHGYVVKSG--IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVG 305
H V++S H + SL+ MY +C D+ A VF ++ + L +W ++I G
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN----SLSTWNSIISG 397
Query: 306 YSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDN 365
++ + L + +G PN +G L HG C +
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPN-----HITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 366 TPVR------NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
+ N+L+DMYAK + A+ VF++ ++D V++ S I G + G AL
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAW 512
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI-----HAFALKDGLVSCSIYVGTA 474
F+ M S PD VT+V VLSAC+ + G + H F ++ L S
Sbjct: 513 FKDM-DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYS-----C 566
Query: 475 LLNFYAKCGDAKSARMVF 492
+++ Y + G AR +F
Sbjct: 567 MVDLYCRAGYLDKARDIF 584
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 23/232 (9%)
Query: 386 RYVFETTVQKD-----VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV-TVVGV 439
R + ET+ D V +NSF C G YEA F +R +S S + + +
Sbjct: 31 RPISETSKTHDDESVPQVLFNSF-RHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASL 89
Query: 440 LSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN 499
LS C G +HA + GL S+ V L+ FY+ A+ + + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLV-PKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 500 AVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS-----HSGMVGEG 554
+ W+ +I Y S+++++ M+ + +E + SV+ AC+ G V G
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 555 SRLFHMMCRELNFVPSMKHYAC--MVDLLARAGNLKEALDFIDKMPVQPGVS 604
S + N Y C ++ + R G + A D+M + VS
Sbjct: 209 S--IEVSSHRCNL------YVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 266/526 (50%), Gaps = 50/526 (9%)
Query: 190 NVVSWTSMF--VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
NV + +M V+ +N+C L++ M V + T L+ A + L + Q
Sbjct: 99 NVFVYNTMISAVSSSKNEC----FGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ--- 151
Query: 248 VHGYVVKSG-IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGY 306
+H +++ SG + + ++L SL+ Y++ G+ G A KVF M D+ S+ MIVGY
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARM----PHPDVSSFNVMIVGY 207
Query: 307 SQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF--D 364
+++G L+AL+L+ GI P+ +G +HG + + G
Sbjct: 208 AKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSS 267
Query: 365 NTPVRNALIDMYAKCHL-------------------------------VSDARYVFETTV 393
N + NAL+DMY KC + A+ VF+
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP 327
Query: 394 QKDVVSWNSFISGCAQSGSAYEAL-EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
++D+VSWNS + G ++ G + E+F M PD VT+V ++S A+ G L G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 453 SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGM 512
+H ++ L ++ +AL++ Y KCG + A MVF EK+ W++MI+G
Sbjct: 388 RWVHGLVIRLQLKG-DAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAF 446
Query: 513 QGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMK 572
G+G ++ LF M +E PN V +VL ACSHSG+V EG +F+ M + F P +
Sbjct: 447 HGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETE 506
Query: 573 HYACMVDLLARAGNLKEALDFID-KMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE 631
HY +VDLL RAG ++EA D + KMP++P S++G+ L C + E E+A+ +L+
Sbjct: 507 HYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLK 566
Query: 632 LHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
L P++ YVL+SN+YA+ GRWG + RE ++ RG+ K G S V
Sbjct: 567 LEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 224/466 (48%), Gaps = 51/466 (10%)
Query: 34 TLYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRL-------FDHLP 86
+L L C + + K+ A ++ DT +S F + + L + P
Sbjct: 37 SLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTP 96
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYH-LTRYTLGFFHDLVVFSIVLKACSELRDVVQA 145
+PN+ + M+ +++ ++ Y + R+ + D F ++KA S L +V Q
Sbjct: 97 NPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVS--PDRQTFLYLMKASSFLSEVKQ- 151
Query: 146 ARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQ 203
+HCH+I SG ++ N LV Y + G+ A KVF + +V S+ M V Y +
Sbjct: 152 --IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 204 NDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSG--IHVNS 261
++E L+L+ +M ++ +++TV SL+ C L + GK VHG++ + G N
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSD------------------------DEL--- 294
L+ +LL+MY KC + G A++ FD M D D++
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 295 DLVSWTAMIVGYSQRGHPLKAL-ELFTDRNWA-GILPNXXXXXXXXXXXXXXXXXXMGML 352
DLVSW +++ GYS++G + + ELF + + P+ G
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS 412
+HGLV++ L + + +ALIDMY KC ++ A VF+T +KDV W S I+G A G+
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAF 458
+AL++F RM+ E + P+ VT++ VL+AC+ G + G +H F
Sbjct: 450 GQQALQLFGRMQEEGVT-PNNVTLLAVLTACSHSGLVEEG--LHVF 492
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 181/429 (42%), Gaps = 50/429 (11%)
Query: 35 LYLSPICKNIDTVKKFHASLIVHG--FPGD---TKLLSLYASFGFLRHARRLFDHLPSPN 89
LYL + VK+ H +IV G G+ L+ Y G A ++F +P P+
Sbjct: 137 LYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 90 LHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLH 149
+ SF M+ Y + + Y + G D +L C L D+ +H
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLY-FKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVH 255
Query: 150 CHVIKSGP---SDGFVLNGLVDAYSKC-------------------------------GH 175
+ + GP S+ + N L+D Y KC G
Sbjct: 256 GWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGD 315
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR-LFNRMR-EGFVDGNDFTVGSLV 233
+ +A+ VFD++ +R++VSW S+ Y + C +R LF M V + T+ SL+
Sbjct: 316 MEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLI 375
Query: 234 TACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDE 293
+ G L G+WVHG V++ + ++FL+++L++MY KCG I A VF + E
Sbjct: 376 SGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK----TATE 431
Query: 294 LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM-L 352
D+ WT+MI G + G+ +AL+LF G+ PN G+ +
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETT--VQKDVVSWNSFISGCAQS 410
+ + K G T +L+D+ + V +A+ + + ++ W S +S C +
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSAC-RG 550
Query: 411 GSAYEALEM 419
G E E+
Sbjct: 551 GEDIETAEL 559
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 125/303 (41%), Gaps = 49/303 (16%)
Query: 392 TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPL 451
T +V +N+ IS A S S E ++ M SP D T + ++ A + L +
Sbjct: 95 TPNPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSP-DRQTFLYLMKASSFLSEV-- 149
Query: 452 GSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYG 511
IH + G +S Y+ +L+ FY + G+ A VF M + +++ MI GY
Sbjct: 150 -KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYA 208
Query: 512 MQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSH----------------------SG 549
QG + ++ L+ M+ + EP+E S+L C H S
Sbjct: 209 KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 550 MVGEGSRL-FHMMCRELNFV---------PSMKHYACMVDLLARAGNLKEALDFIDKMPV 599
++ + L + C+E M+ + MV R G+++ A D+MP
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
Query: 600 QPGVS----VFGAYLHGCGLHSEFEL-GEVAIRRMLELHPDQACYYVLVS----NLYASD 650
+ VS +FG GC + EL E+ I + ++ PD+ L+S N S
Sbjct: 329 RDLVSWNSLLFGYSKKGCDQRTVRELFYEMTI--VEKVKPDRVTMVSLISGAANNGELSH 386
Query: 651 GRW 653
GRW
Sbjct: 387 GRW 389
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 194/322 (60%), Gaps = 7/322 (2%)
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
+ P N++++ YAK L+ DAR +F+ +++V+SW+ I+G G EAL++F+ M+
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 425 ----SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+E+F P+ T+ VLSAC LGAL G +HA+ K V I +GTAL++ YA
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYH-VEIDIVLGTALIDMYA 245
Query: 481 KCGDAKSARMVFDGMGEKNAV-TWSAMISGYGMQGDGVGSIALFRDML-KEECEPNEVVF 538
KCG + A+ VF+ +G K V +SAMI M G LF +M + PN V F
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTF 305
Query: 539 TSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP 598
+L AC H G++ EG F MM E PS++HY CMVDL R+G +KEA FI MP
Sbjct: 306 VGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQ 658
++P V ++G+ L G + + + E A++R++EL P + YVL+SN+YA GRW VK
Sbjct: 366 MEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKC 425
Query: 659 VREMIKQRGLNKVPGCSLVEID 680
+R ++ +G+NKVPGCS VE++
Sbjct: 426 IRHEMEVKGINKVPGCSYVEVE 447
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 170/340 (50%), Gaps = 15/340 (4%)
Query: 80 RLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSEL 139
R+ +H SP+ H+F +L F N LH + H G D V + +L S
Sbjct: 52 RMRNHRVSPDFHTFPFLLP-SFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSC 110
Query: 140 RDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFV 199
D+ A R+ SG D N +V+AY+K G + ARK+FDE+ ERNV+SW+ +
Sbjct: 111 GDLRSAQRV---FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLIN 167
Query: 200 AYVQNDCAVEGLRLFNRMR-----EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK 254
YV E L LF M+ E FV N+FT+ ++++AC +LG+L QGKWVH Y+ K
Sbjct: 168 GYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK 227
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
+ ++ L T+L++MY KCG + A++VF+ + + D+ +++AMI + G +
Sbjct: 228 YHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK---DVKAYSAMICCLAMYGLTDE 284
Query: 315 ALELFTDRNWA-GILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV-KCGLFDNTPVRNAL 372
+LF++ + I PN G +++ + G+ + +
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCM 344
Query: 373 IDMYAKCHLVSDAR-YVFETTVQKDVVSWNSFISGCAQSG 411
+D+Y + L+ +A ++ ++ DV+ W S +SG G
Sbjct: 345 VDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 156/363 (42%), Gaps = 45/363 (12%)
Query: 194 WTSMFVAYVQNDCAVE---GLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHG 250
W + A V N + + + ++ RMR V + T L+ + L G+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGD-------------------------------IGD 279
++ G+ + F+ TSLLNMY CGD I D
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR-----NWAGILPNXXXX 334
ARK+FDEM E +++SW+ +I GY G +AL+LF + N A + PN
Sbjct: 147 ARKLFDEM----PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 335 XXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETT-V 393
G +H + K + + + ALIDMYAKC + A+ VF
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 394 QKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGS 453
+KDV ++++ I A G E ++F M + P++VT VG+L AC G + G
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 454 SIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGM 512
S +++ ++ SI +++ Y + G K A M E + + W +++SG M
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 513 QGD 515
GD
Sbjct: 383 LGD 385
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 42/250 (16%)
Query: 400 WNSFISGCAQSGSA---YEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
WN I + S+ + + ++ RMR+ SP D T +L + + LPLG H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSP-DFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKS----------------------------- 487
A L GL +V T+LLN Y+ CGD +S
Sbjct: 86 AQILLFGLDK-DPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 488 --ARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDM-LKEECE----PNEVVFTS 540
AR +FD M E+N ++WS +I+GY M G ++ LFR+M L + E PNE ++
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ 600
VL+AC G + +G + H + + + ++D+ A+ G+L+ A + + +
Sbjct: 205 VLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 601 PGVSVFGAYL 610
V + A +
Sbjct: 264 KDVKAYSAMI 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 11/260 (4%)
Query: 59 FPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFY---HL 115
P +++ YA G + AR+LFD +P N+ S+ ++ Y + + + + + L
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 116 TRYTLGFFH-DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKC 173
+ F + S VL AC L + Q +H ++ K VL L+D Y+KC
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 174 GHVCSARKVFDEI-AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREG-FVDGNDFTVGS 231
G + A++VF+ + ++++V ++++M E +LF+ M ++ N T
Sbjct: 248 GSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVG 307
Query: 232 LVTACTKLGSLHQGKWVHGYVVKS-GIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
++ AC G +++GK +++ GI + ++++Y + G I +A M
Sbjct: 308 ILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM- 366
Query: 291 DDELDLVSWTAMIVGYSQRG 310
E D++ W +++ G G
Sbjct: 367 --EPDVLIWGSLLSGSRMLG 384
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 232/443 (52%), Gaps = 11/443 (2%)
Query: 237 TKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDL 296
+KLG V+G + K N + L+N YV+ GD+ +ARKVFDEM + L
Sbjct: 5 SKLGDFPSAVAVYGRMRKK----NYMSSNILINGYVRAGDLVNARKVFDEM----PDRKL 56
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGL 356
+W AMI G Q + L LF + + G P+ +G +HG
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
+K GL + V ++L MY + + D V + +++V+WN+ I G AQ+G
Sbjct: 117 TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 176
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
L +++ M+ S P+ +T V VLS+C+ L G IHA A+K G S V ++L+
Sbjct: 177 LYLYKMMKI-SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV-SSLI 234
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE-ECEPNE 535
+ Y+KCG A F +++ V WS+MIS YG G G +I LF M ++ E NE
Sbjct: 235 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 294
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID 595
V F ++L ACSHSG+ +G LF MM + F P +KHY C+VDLL RAG L +A I
Sbjct: 295 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 354
Query: 596 KMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGM 655
MP++ + ++ L C +H E+ + + +L++ P+ + YVL++N++AS RW
Sbjct: 355 SMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRD 414
Query: 656 VKQVREMIKQRGLNKVPGCSLVE 678
V +VR+ ++ + + K G S E
Sbjct: 415 VSEVRKSMRDKNVKKEAGISWFE 437
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 177/386 (45%), Gaps = 17/386 (4%)
Query: 164 NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD 223
N L++ Y + G + +ARKVFDE+ +R + +W +M +Q + EGL LF M
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
+++T+GS+ + L S+ G+ +HGY +K G+ ++ + +SL +MY++ G + D V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
M +LV+W +I+G +Q G P L L+ +G PN
Sbjct: 149 IRSMPVR----NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204
Query: 344 XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSF 403
G +H +K G V ++LI MY+KC + DA F +D V W+S
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSM 264
Query: 404 ISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSS-----IHAF 458
IS G EA+E+F M ++ + V + +L AC+ G G + +
Sbjct: 265 ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKY 324
Query: 459 ALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGDGV 517
K GL T +++ + G A + M K + V W ++S + +
Sbjct: 325 GFKPGLKHY-----TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAE 379
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLA 543
+ +F+++L + +PN+ +LA
Sbjct: 380 MAQRVFKEIL--QIDPNDSACYVLLA 403
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 171/387 (44%), Gaps = 15/387 (3%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
L++ Y G L +AR++FD +P L ++ AM+ + + +S + + LGF
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR-EMHGLGFSP 89
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNG-LVDAYSKCGHVCSARKVF 183
D V + LR V ++H + IK G V+N L Y + G + V
Sbjct: 90 DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
+ RN+V+W ++ + QN C L L+ M+ N T +++++C+ L
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
QG+ +H +K G + +SL++MY KCG +GDA K F E +DE D V W++MI
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE---REDE-DEVMWSSMI 265
Query: 304 VGYSQRGHPLKALELF-TDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV-KCG 361
Y G +A+ELF T + N G+ L ++V K G
Sbjct: 266 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETT-VQKDVVSWNSFISGCAQSGSAYEALEMF 420
++D+ + + A + + ++ D+V W + +S C + ++ EM
Sbjct: 326 FKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC----NIHKNAEMA 381
Query: 421 QRMRSE--SFSPPDAVTVVGVLSACAS 445
QR+ E P D+ V + + AS
Sbjct: 382 QRVFKEILQIDPNDSACYVLLANVHAS 408
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 49/304 (16%)
Query: 373 IDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS-------------------- 412
+ MY+K A V+ +K+ +S N I+G ++G
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 413 -----------AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK 461
E L +F+ M FS PD T+ V S A L ++ +G IH + +K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFS-PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 462 DGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIA 521
GL + V ++L + Y + G + +V M +N V W+ +I G G +
Sbjct: 120 YGL-ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 522 LFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLL 581
L++ M C PN++ F +VL++CS + G+G ++ H ++ + + ++ +
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMY 237
Query: 582 ARAGNLKEALDFIDKMPVQPGV---SVFGAY-LHGCG-----------LHSEFELGEVAI 626
++ G L +A + + V S+ AY HG G + E+ EVA
Sbjct: 238 SKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
Query: 627 RRML 630
+L
Sbjct: 298 LNLL 301
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 274/549 (49%), Gaps = 12/549 (2%)
Query: 131 IVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER 189
I+ + +++ + +LH V KS D + L Y+ + SARK+FD ER
Sbjct: 10 IIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPER 69
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
+V W S+ AY + L LF+++ ++FT L ++ + +H
Sbjct: 70 SVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIH 129
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
G + SG+ + ++++ Y K G I +A K+F S + DL W MI+GY
Sbjct: 130 GIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLF----CSIPDPDLALWNVMILGYGCC 185
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
G K + LF G PN + +H +K L ++ V
Sbjct: 186 GFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVG 245
Query: 370 NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS 429
AL++MY++C ++ A VF + + D+V+ +S I+G ++ G+ EAL +F +R S
Sbjct: 246 CALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRM-SGK 304
Query: 430 PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSAR 489
PD V V VL +CA L G +H++ ++ GL I V +AL++ Y+KCG K A
Sbjct: 305 KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGL-ELDIKVCSALIDMYSKCGLLKCAM 363
Query: 490 MVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSG 549
+F G+ EKN V+++++I G G+ G + F ++L+ P+E+ F+++L C HSG
Sbjct: 364 SLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSG 423
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM--PVQPGVSVFG 607
++ +G +F M E P +HY MV L+ AG L+EA +F+ + P+ G + G
Sbjct: 424 LLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSG--ILG 481
Query: 608 AYLHGCGLHSEFELGEVAIRRMLELHPD-QACYYVLVSNLYASDGRWGMVKQVREMIKQR 666
A L C +H L EV + + + ++ Y V++SN+YA GRW V+++R+ I +
Sbjct: 482 ALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISES 541
Query: 667 GLNKVPGCS 675
K+PG S
Sbjct: 542 YGGKLPGIS 550
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 182/395 (46%), Gaps = 9/395 (2%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS-FYHLTRYTLG 121
T+L YA L AR+LFD P ++ + +++R Y + + V+S F + R
Sbjct: 44 TQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTR 103
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSAR 180
D ++ + + SE D +H I SG D + +V AYSK G + A
Sbjct: 104 --PDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEAS 161
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
K+F I + ++ W M + Y +G+ LFN M+ N +T+ +L +
Sbjct: 162 KLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPS 221
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
L VH + +K + +S++ +L+NMY +C I A VF+ S E DLV+ +
Sbjct: 222 LLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFN----SISEPDLVACS 277
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
++I GYS+ G+ +AL LF + +G P+ G +H V++
Sbjct: 278 SLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRL 337
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
GL + V +ALIDMY+KC L+ A +F +K++VS+NS I G G A A E F
Sbjct: 338 GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKF 397
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
+ PD +T +L C G L G I
Sbjct: 398 TEILEMGL-IPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 3/193 (1%)
Query: 57 HGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLT 116
H + G L+++Y+ + A +F+ + P+L + +++ Y H + + +
Sbjct: 241 HSYVG-CALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL 299
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGH 175
R + G D V+ +IVL +C+EL D V +H +VI+ G D V + L+D YSKCG
Sbjct: 300 RMS-GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGL 358
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA 235
+ A +F I E+N+VS+ S+ + + A F + E + ++ T +L+
Sbjct: 359 LKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCT 418
Query: 236 CTKLGSLHQGKWV 248
C G L++G+ +
Sbjct: 419 CCHSGLLNKGQEI 431
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 244/475 (51%), Gaps = 38/475 (8%)
Query: 238 KLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
++ S ++ K ++ ++ G+ +SF+ T +++ K D+ A ++F+++ + +
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPN----VF 74
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGI-LPNXXXXXXXXXXXXXXXXXXMGMLLHGL 356
+ ++I Y+ + ++ LP+ +G +HG
Sbjct: 75 LYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 134
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG----- 411
+ K G + NALIDMY K + DA VF+ ++DV+SWNS +SG A+ G
Sbjct: 135 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 194
Query: 412 -------------------SAY-------EALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
S Y EA++ F+ M+ P D ++++ VL +CA
Sbjct: 195 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP-DEISLISVLPSCAQ 253
Query: 446 LGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSA 505
LG+L LG IH +A + G + V AL+ Y+KCG A +F M K+ ++WS
Sbjct: 254 LGSLELGKWIHLYAERRGFLK-QTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWST 312
Query: 506 MISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCREL 565
MISGY G+ G+I F +M + + +PN + F +L+ACSH GM EG R F MM ++
Sbjct: 313 MISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDY 372
Query: 566 NFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVA 625
P ++HY C++D+LARAG L+ A++ MP++P ++G+ L C ++ VA
Sbjct: 373 QIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVA 432
Query: 626 IRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
+ ++EL P+ YVL++N+YA G+W V ++R+MI+ + K PG SL+E++
Sbjct: 433 MDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVN 487
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 198/450 (44%), Gaps = 56/450 (12%)
Query: 42 KNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAML 97
K+ + KK +AS+I+HG TK++ + +A RLF+ + +PN+ + +++
Sbjct: 21 KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 98 RWYFLNNLHSDVVSFY-HLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
R Y N+L+ DV+ Y L R + D F + K+C+ L ++H H+ K G
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLRKSFEL-PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 157 PSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNV------------------------ 191
P V N L+D Y K + A KVFDE+ ER+V
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 192 -------VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQ 244
VSWT+M Y C VE + F M+ ++ ++ ++ S++ +C +LGSL
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
GKW+H Y + G + + +L+ MY KCG I A ++F +M + D++SW+ MI
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM----EGKDVISWSTMIS 315
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
GY+ G+ A+E F + A + PN +GM GL +
Sbjct: 316 GYAYHGNAHGAIETFNEMQRAKVKPN-----GITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 365 NTPVR------NALIDMYAKCHLVSDARYVFETTVQK-DVVSWNSFISGCAQSGSAYEAL 417
+ + LID+ A+ + A + +T K D W S +S C G+ AL
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLG 447
+ P D V + + A LG
Sbjct: 431 VAMDHLV--ELEPEDMGNYVLLANIYADLG 458
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 225/430 (52%), Gaps = 37/430 (8%)
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG--ILPNXXXXXXXXXXXX 342
+++L ++ L + +MI + + P K+ + + +G + P+
Sbjct: 60 NQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT 119
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTP-VRNALIDMYAK------CHLVSD----------- 384
G+ +HG+ ++ G FDN P V+ LI +YA+ CH V +
Sbjct: 120 GLRMRETGLQVHGMTIRRG-FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 385 --------------ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSP 430
AR +FE ++D ++WN+ ISG AQ G + EAL +F M+ E
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 431 PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
+ V ++ VLSAC LGAL G H++ ++ + ++ + T L++ YAKCGD + A
Sbjct: 239 -NGVAMISVLSACTQLGALDQGRWAHSY-IERNKIKITVRLATTLVDLYAKCGDMEKAME 296
Query: 491 VFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGM 550
VF GM EKN TWS+ ++G M G G + LF M ++ PN V F SVL CS G
Sbjct: 297 VFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGF 356
Query: 551 VGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYL 610
V EG R F M E P ++HY C+VDL ARAG L++A+ I +MP++P +V+ + L
Sbjct: 357 VDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Query: 611 HGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNK 670
H ++ ELG +A ++MLEL YVL+SN+YA W V VR+ +K +G+ K
Sbjct: 417 HASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRK 476
Query: 671 VPGCSLVEID 680
PGCS++E++
Sbjct: 477 QPGCSVMEVN 486
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 49/326 (15%)
Query: 47 VKKFHASLIVHGFPGDTKLLSLY------ASFGFLRHARRLFDHLPSPNLHSFKAMLRWY 100
V++ HA L V G D L+ + + +L +A ++ D P L + +M+R +
Sbjct: 22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAH 81
Query: 101 FLNNLHSDVVSFYHLTRYTLGFFHDL----VVFSIVLKACSELRDVVQAARLHCHVIKSG 156
+ + FY R L +DL + +++AC+ LR ++H I+ G
Sbjct: 82 CKSPVPEKSFDFY---RRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 157 -PSDGFVLNGLVDAYS-------------------------------KCGHVCSARKVFD 184
+D V GL+ Y+ +CG V ARK+F+
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 185 EIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQ 244
+ ER+ ++W +M Y Q + E L +F+ M+ V N + S+++ACT+LG+L Q
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
G+W H Y+ ++ I + LAT+L+++Y KCGD+ A +VF M +E ++ +W++ +
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM----EEKNVYTWSSALN 314
Query: 305 GYSQRGHPLKALELFTDRNWAGILPN 330
G + G K LELF+ G+ PN
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPN 340
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 364 DNTPVRNALIDMYAKCHLVSDARY------VFETTVQKDVVSWNSFISGCAQSGSAYEAL 417
D T + L+ + K +SD +Y + + + + + + NS I +S ++
Sbjct: 32 DGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSF 91
Query: 418 EMFQRMRSESFS-PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL------------ 464
+ ++R+ S PD TV ++ AC L G +H ++ G
Sbjct: 92 DFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLIS 151
Query: 465 -----------------VSCSIYV-GTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAM 506
+ C +V TA++ A+CGD AR +F+GM E++ + W+AM
Sbjct: 152 LYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAM 211
Query: 507 ISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELN 566
ISGY G+ ++ +F M E + N V SVL+AC+ G + +G R H
Sbjct: 212 ISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNK 270
Query: 567 FVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH 616
+++ +VDL A+ G++++A++ M + V + + L+G ++
Sbjct: 271 IKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMN 319
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 2 LVAPCSLFHSSKSLIQFRSLSSYIAF-TLPHPPT----LYLSPICKNIDTVKKFHASLIV 56
LV C+ ++ +Q ++ F PH T LY C +D+ K S+
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGC--LDSCHKVFNSIPC 171
Query: 57 HGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLT 116
F T +++ A G + AR+LF+ +P + ++ AM+ Y + ++ +HL
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGH 175
+ G + V VL AC++L + Q H ++ ++ L LVD Y+KCG
Sbjct: 232 QLE-GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA 235
+ A +VF + E+NV +W+S N + L LF+ M++ V N T S++
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLA--TSLLNMYVKCGDIGDARKVFDEM 287
C+ +G + +G+ H +++ + L L+++Y + G + DA + +M
Sbjct: 351 CSVVGFVDEGQ-RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/686 (26%), Positives = 321/686 (46%), Gaps = 20/686 (2%)
Query: 7 SLFHSSKSLIQFRSLSSYIAFTLPHPPTLYLSPICK------NIDTVKKFHASLIVHGFP 60
S F S+ SL + + HP S + + +I + H S+I GF
Sbjct: 97 SAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE 156
Query: 61 GDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLT 116
G++ L LY+ G + A LF L + + S+ M+ + + FY
Sbjct: 157 GNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYS-E 215
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGH 175
G + F +L A S L + +H ++I G P + + LVD YS+
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK 274
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA 235
+ A +V + E++V WTS+ +V+N A E + F MR + N+FT ++++
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC-GDIGDARKVFDEMLTSDDEL 294
C+ + SL GK +H +K G ++ + +L++MY+KC +A +VF M++ +
Sbjct: 335 CSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPN--- 391
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
+VSWT +I+G G L + + PN + +H
Sbjct: 392 -VVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIH 450
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
+++ + V N+L+D YA V A V + ++D +++ S ++ + G
Sbjct: 451 AYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHE 510
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTA 474
AL + M + D +++ G +SA A+LGAL G +H +++K G S + V +
Sbjct: 511 MALSVINYMYGDGIRM-DQLSLPGFISASANLGALETGKHLHCYSVKSGF-SGAASVLNS 568
Query: 475 LLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPN 534
L++ Y+KCG + A+ VF+ + + V+W+ ++SG G +++ F +M +E EP+
Sbjct: 569 LVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPD 628
Query: 535 EVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFI 594
V F +L+ACS+ + G F +M + N P ++HY +V +L RAG L+EA +
Sbjct: 629 SVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVV 688
Query: 595 DKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWG 654
+ M ++P +F L C LGE + L L P Y+L+++LY G+
Sbjct: 689 ETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPE 748
Query: 655 MVKQVREMIKQRGLNKVPGCSLVEID 680
+ ++ R ++ ++ L+K G S VE+
Sbjct: 749 LAQKTRNLMTEKRLSKKLGKSTVEVQ 774
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 273/592 (46%), Gaps = 16/592 (2%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
LLSLY + +AR+LFD + + ++ M+ + + + +S + + G
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMAS-GTHP 122
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVF 183
+ FS V+++C+ LRD+ R+H VIK+G + V + L D YSKCG A ++F
Sbjct: 123 NEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
+ + +SWT M + V E L+ ++ M + V N+FT L+ A + LG L
Sbjct: 183 SSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LE 241
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
GK +H ++ GI +N L TSL++ Y + + DA +V L S E D+ WT+++
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV----LNSSGEQDVFLWTSVV 297
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
G+ + +A+ F + G+ PN G +H +K G
Sbjct: 298 SGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFE 357
Query: 364 DNTPVRNALIDMYAKCHLVS-DARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
D+T V NAL+DMY KC +A VF V +VVSW + I G G + +
Sbjct: 358 DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKC 482
M P+ VT+ GVL AC+ L + IHA+ L+ V + VG +L++ YA
Sbjct: 418 MVKREV-EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASS 475
Query: 483 GDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVL 542
A V M ++ +T++++++ + G ++++ M + +++ +
Sbjct: 476 RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFI 535
Query: 543 AACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPG 602
+A ++ G + G L H + F + +VD+ ++ G+L++A +++ P
Sbjct: 536 SASANLGALETGKHL-HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PD 593
Query: 603 VSVFGAYLHGCGLHSEFELGEVAIR--RMLELHPDQACYYVLVSNLYASDGR 652
V + + G + A RM E PD + +L+S S+GR
Sbjct: 594 VVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS--ACSNGR 643
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 199/401 (49%), Gaps = 9/401 (2%)
Query: 148 LHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDC 206
+HC VIK G + L N L+ Y K + +ARK+FDE++ R V +WT M A+ ++
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 207 AVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATS 266
L LF M N+FT S+V +C L + G VHG V+K+G NS + +S
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 267 LLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG 326
L ++Y KCG +A ++F + +D +SWT MI +AL+ +++ AG
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADT----ISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 327 ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDAR 386
+ PN G +H ++ G+ N ++ +L+D Y++ + DA
Sbjct: 221 VPPN-EFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 387 YVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
V ++ ++DV W S +SG ++ A EA+ F MRS P + T +LS C+++
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN-FTYSAILSLCSAV 338
Query: 447 GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK-SARMVFDGMGEKNAVTWSA 505
+L G IH+ +K G S VG AL++ Y KC ++ A VF M N V+W+
Sbjct: 339 RSLDFGKQIHSQTIKVGFED-STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTT 397
Query: 506 MISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
+I G G L +M+K E EPN V + VL ACS
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 160/324 (49%), Gaps = 13/324 (4%)
Query: 229 VGSLVTACTKLGSLHQ------GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
+G+L +C ++ S + G +H V+K G+ N L +LL++Y+K I +ARK
Sbjct: 20 LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARK 79
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
+FDEM + +WT MI +++ AL LF + +G PN
Sbjct: 80 LFDEM----SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA 135
Query: 343 XXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNS 402
G +HG V+K G N+ V ++L D+Y+KC +A +F + D +SW
Sbjct: 136 GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTM 195
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
IS + EAL+ + M ++ PP+ T V +L A + LG L G +IH+ +
Sbjct: 196 MISSLVGARKWREALQFYSEM-VKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVR 253
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIAL 522
G + ++ + T+L++FY++ + A V + GE++ W++++SG+ ++
Sbjct: 254 G-IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 523 FRDMLKEECEPNEVVFTSVLAACS 546
F +M +PN ++++L+ CS
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCS 336
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 13/301 (4%)
Query: 349 MGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCA 408
+G+ +H V+K GL +N + N L+ +Y K + +AR +F+ + V +W IS
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
+S AL +F+ M + S + P+ T V+ +CA L + G +H +K G S
Sbjct: 101 KSQEFASALSLFEEMMA-SGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
+ VG++L + Y+KCG K A +F + + ++W+ MIS ++ + +M+K
Sbjct: 160 V-VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK 218
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFH--MMCRELNFVPSMKHYACMVDLLARAGN 586
PNE F +L A S G+ E + H ++ R + +K +VD ++
Sbjct: 219 AGVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLK--TSLVDFYSQFSK 274
Query: 587 LKEALDFIDKMPVQP---GVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLV 643
+++A+ ++ Q SV ++ L ++ +G R L L P+ Y ++
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVR--NLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 644 S 644
S
Sbjct: 333 S 333
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
+ +LS C S + +G IH +K GL+ ++ + LL+ Y K +AR +FD M
Sbjct: 28 IRILSFCES-NSSRIGLHIHCPVIKFGLLE-NLDLCNNLLSLYLKTDGIWNARKLFDEMS 85
Query: 497 EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSR 556
+ W+ MIS + + +++LF +M+ PNE F+SV+ +C+ + G R
Sbjct: 86 HRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGR 145
Query: 557 LFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
+ H + F + + + DL ++ G KEA + + +S
Sbjct: 146 V-HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTIS 192
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 210/373 (56%), Gaps = 36/373 (9%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDV------------ 397
G +HG VV G + V LI MY C + DAR +F+ + KDV
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 398 ---------------------VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTV 436
VSW ISG A+SG A EA+E+FQRM E+ P D VT+
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP-DEVTL 253
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
+ VLSACA LG+L LG I ++ G+ + ++ + A+++ YAK G+ A VF+ +
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGM-NRAVSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 497 EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSR 556
E+N VTW+ +I+G G G ++A+F M+K PN+V F ++L+ACSH G V G R
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Query: 557 LFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH 616
LF+ M + P+++HY CM+DLL RAG L+EA + I MP + +++G+ L +H
Sbjct: 373 LFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH 432
Query: 617 SEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSL 676
+ ELGE A+ +++L P+ + Y+L++NLY++ GRW + +R M+K G+ K+ G S
Sbjct: 433 HDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESS 492
Query: 677 VEIDLNDTYSKVT 689
+E++ N Y ++
Sbjct: 493 IEVE-NRVYKFIS 504
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 190/428 (44%), Gaps = 52/428 (12%)
Query: 42 KNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAML 97
N+ T+K+ H +I+ G D K + ++ G LR+A +F H P PN + M+
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 98 RWYFL---NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK 154
R L N HS ++ Y + L D F VLK + DV ++H V+
Sbjct: 86 RALSLLDEPNAHSIAITVYR-KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 155 SG-PSDGFVLNGLVDAYSKCGHVCSARKVFDE------------------IAE------- 188
G S V+ GL+ Y CG + ARK+FDE + E
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 189 --------RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
RN VSWT + Y ++ A E + +F RM V+ ++ T+ ++++AC LG
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
SL G+ + YV G++ L ++++MY K G+I A VF+ + +E ++V+WT
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV----NERNVVTWT 320
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG-MLLHGLVVK 359
+I G + GH +AL +F AG+ PN +G L + + K
Sbjct: 321 TIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSK 380
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETT-VQKDVVSWNSFISGCAQSGSAYEALE 418
G+ N +ID+ + + +A V ++ + + W S ++ + + + LE
Sbjct: 381 YGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA----ASNVHHDLE 436
Query: 419 MFQRMRSE 426
+ +R SE
Sbjct: 437 LGERALSE 444
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPS--PNLHSFKAMLR 98
C + +K ++V LL+ Y G + AR L + +P N S+ ++
Sbjct: 164 CGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVIS 223
Query: 99 WYFLNNLHSDVVSFYHLTRYTLGFFH-DLVVFSIVLKACSELRDVVQAARLHCHVIKSGP 157
Y + S+ + + R + D V VL AC++L + R+ +V G
Sbjct: 224 GYAKSGRASEAIEVFQ--RMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGM 281
Query: 158 SDGFVLN-GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNR 216
+ LN ++D Y+K G++ A VF+ + ERNVV+WT++ + E L +FNR
Sbjct: 282 NRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNR 341
Query: 217 MREGFVDGNDFTVGSLVTACTKLGSLHQGKWV-HGYVVKSGIHVNSFLATSLLNMYVKCG 275
M + V ND T ++++AC+ +G + GK + + K GIH N ++++ + G
Sbjct: 342 MVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAG 401
Query: 276 DIGDARKVFDEM 287
+ +A +V M
Sbjct: 402 KLREADEVIKSM 413
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 217/384 (56%), Gaps = 8/384 (2%)
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNW--AGILPNXXXXXXXXXXXXXXXXXXMGML 352
++ SW +I +S+ G K+++LF R W + + P+ G L
Sbjct: 97 NIFSWNIIIGEFSRSGFASKSIDLFL-RMWRESCVRPDDFTLPLILRACSASREAKSGDL 155
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS 412
+H L +K G + V +AL+ MY + AR +F+ +D V + + G Q G
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSC-SIYV 471
A L MF+ M F+ D+V +V +L AC LGAL G S+H + ++ SC + +
Sbjct: 216 AMLGLAMFREMGYSGFAL-DSVVMVSLLMACGQLGALKHGKSVHGWCIRR--CSCLGLNL 272
Query: 472 GTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEEC 531
G A+ + Y KC A VF M ++ ++WS++I GYG+ GD V S LF +MLKE
Sbjct: 273 GNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI 332
Query: 532 EPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEAL 591
EPN V F VL+AC+H G+V E S L+ + +E N VP +KHYA + D ++RAG L+EA
Sbjct: 333 EPNAVTFLGVLSACAHGGLV-EKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAE 391
Query: 592 DFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDG 651
F++ MPV+P +V GA L GC ++ E+GE R +++L P +A YYV ++ LY++ G
Sbjct: 392 KFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAG 451
Query: 652 RWGMVKQVREMIKQRGLNKVPGCS 675
R+ + +R+ +K++ ++KVPGCS
Sbjct: 452 RFDEAESLRQWMKEKQISKVPGCS 475
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 189/429 (44%), Gaps = 48/429 (11%)
Query: 166 LVDAYSKCGHVC-SARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVD 223
LV AYSK H+ ++ VF + RN+ SW + + ++ A + + LF RM RE V
Sbjct: 72 LVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVR 131
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
+DFT+ ++ AC+ G +H +K G + F++++L+ MYV G + ARK+
Sbjct: 132 PDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKL 191
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
FD+M D L +TAM GY Q+G + L +F + ++G +
Sbjct: 192 FDDMPVRDSVL----YTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQ 247
Query: 344 XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSF 403
G +HG ++ + NA+ DMY KC ++ A VF ++DV+SW+S
Sbjct: 248 LGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 307
Query: 404 ISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDG 463
I G G + ++F M E P+AVT +GVLSACA G L S ++ +++
Sbjct: 308 ILGYGLDGDVVMSFKLFDEMLKEGIE-PNAVTFLGVLSACAH-GGLVEKSWLYFRLMQE- 364
Query: 464 LVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALF 523
Y L YA D S + + EK
Sbjct: 365 ------YNIVPELKHYASVADCMSRAGLLEE-AEK-----------------------FL 394
Query: 524 RDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMK--HYACMVDLL 581
DM +P+E V +VL+ C G V G R+ REL + K +Y + L
Sbjct: 395 EDM---PVKPDEAVMGAVLSGCKVYGNVEVGERV----ARELIQLKPRKASYYVTLAGLY 447
Query: 582 ARAGNLKEA 590
+ AG EA
Sbjct: 448 SAAGRFDEA 456
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 50 FHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDV 109
F +SL V + L+ +Y G L HAR+LFD +P + + AM Y
Sbjct: 165 FSSSLFV-----SSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLG 219
Query: 110 VSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVD 168
++ + Y+ GF D VV +L AC +L + +H I+ G L N + D
Sbjct: 220 LAMFREMGYS-GFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITD 278
Query: 169 AYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFT 228
Y KC + A VF ++ R+V+SW+S+ + Y + V +LF+ M + ++ N T
Sbjct: 279 MYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVT 338
Query: 229 VGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFL-ATSLLNMYVKCGDIGDARKVFDEM 287
+++AC G L + W++ +++ V S+ + + G + +A K ++M
Sbjct: 339 FLGVLSACAH-GGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM 397
Query: 288 LTSDDE 293
DE
Sbjct: 398 PVKPDE 403
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 196/330 (59%), Gaps = 1/330 (0%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G +HG V K GL + V+N+LI+MY +C + + VFE K SW+S +S A
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAG 210
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
G E L +F+ M SE+ + +V L ACA+ GAL LG SIH F L++ + +I
Sbjct: 211 MGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN-ISELNI 269
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE 529
V T+L++ Y KCG A +F M ++N +T+SAMISG + G+G ++ +F M+KE
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 530 ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKE 589
EP+ VV+ SVL ACSHSG+V EG R+F M +E P+ +HY C+VDLL RAG L+E
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 590 ALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYAS 649
AL+ I +P++ ++ +L C + ELG++A + +L+L Y+L+SNLY+
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 650 DGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
W V + R I +GL + PG S+VE+
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQTPGFSIVEL 479
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 162/346 (46%), Gaps = 13/346 (3%)
Query: 171 SKCGH------VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDG 224
+KC H + A +F I + + +M YV E L +N M + +
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 225 NDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVF 284
++FT L+ ACT+L S+ +GK +HG V K G+ + F+ SL+NMY +CG++ + VF
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDR-NWAGILPNXXXXXXXXXXXXX 343
+++ + SW++M+ + G + L LF + +
Sbjct: 191 EKL----ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACAN 246
Query: 344 XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSF 403
+GM +HG +++ N V+ +L+DMY KC + A ++F+ +++ +++++
Sbjct: 247 TGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAM 306
Query: 404 ISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDG 463
ISG A G AL MF +M E PD V V VL+AC+ G + G + A LK+G
Sbjct: 307 ISGLALHGEGESALRMFSKMIKEGLE-PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG 365
Query: 464 LVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMIS 508
V + L++ + G + A + EKN V W +S
Sbjct: 366 KVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 17/385 (4%)
Query: 35 LYLSPICKNIDTVKKFHASLI-----VHGFPGDTKLLSLYASFGF---LRHARRLFDHLP 86
LYL C NID K+ HA I + +L+ A G+ + +A +F +
Sbjct: 34 LYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGID 93
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P F M+R Y + + FY+ G D + +LKAC+ L+ + +
Sbjct: 94 DPCTFDFNTMIRGYVNVMSFEEALCFYN-EMMQRGNEPDNFTYPCLLKACTRLKSIREGK 152
Query: 147 RLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
++H V K G +D FV N L++ Y +CG + + VF+++ + SW+SM A
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 206 CAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA 264
E L LF M E + + + S + AC G+L+ G +HG+++++ +N +
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQ 272
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
TSL++MYVKCG + A +F +M ++ ++++AMI G + G AL +F+
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNN----LTYSAMISGLALHGEGESALRMFSKMIK 328
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR-NALIDMYAKCHLVS 383
G+ P+ G + ++K G + T L+D+ + L+
Sbjct: 329 EGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLE 388
Query: 384 DARYVFETT-VQKDVVSWNSFISGC 407
+A ++ ++K+ V W +F+S C
Sbjct: 389 EALETIQSIPIEKNDVIWRTFLSQC 413
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 192/327 (58%), Gaps = 9/327 (2%)
Query: 362 LFDNTPVRN-----ALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
LFD RN A++ YA+ +S+A +FE ++DV SWN+ ++ C Q+G EA
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
+ +F+RM +E P+ VTVV VLSACA G L L IHAFA + L S ++V +L+
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDL-SSDVFVSNSLV 302
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK---EECEP 533
+ Y KCG+ + A VF +K+ W++MI+ + + G +IA+F +M+K + +P
Sbjct: 303 DLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKP 362
Query: 534 NEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDF 593
+ + F +L AC+H G+V +G F +M P ++HY C++DLL RAG EAL+
Sbjct: 363 DHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEV 422
Query: 594 IDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRW 653
+ M ++ +++G+ L+ C +H +L EVA++ ++ L+P+ Y +++NLY G W
Sbjct: 423 MSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNW 482
Query: 654 GMVKQVREMIKQRGLNKVPGCSLVEID 680
++ R+MIK + K PG S +EID
Sbjct: 483 EEARRARKMIKHQNAYKPPGWSRIEID 509
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 211/511 (41%), Gaps = 100/511 (19%)
Query: 42 KNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLR-----HARRLFDHLPSPNLHSFKAM 96
++++ +K+ + +IV G L F LR +AR +FD PN H + A+
Sbjct: 35 RHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAV 94
Query: 97 LRWYFLN-NLH-SDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK 154
L Y + LH S SF+ L + ++ +VLK+ L +H H+ K
Sbjct: 95 LTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFK 154
Query: 155 SGPSDGFVLN-GLVDAY-SKCGHVCSARKVFDEIAERNVVSWTSMFVAY----------- 201
SG V+ L+ +Y S H+ AR++FDE++ERNVVSWT+M Y
Sbjct: 155 SGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVA 214
Query: 202 --------------------VQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLG 240
QN +E + LF RM E + N+ TV +++AC + G
Sbjct: 215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTG 274
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
+L K +H + + + + F++ SL+++Y KCG++ +A VF + L +W
Sbjct: 275 TLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA----SKKSLTAWN 330
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
+MI ++ G +A+ +F + ++K
Sbjct: 331 SMINCFALHGRSEEAIAVFEE-----------------------------------MMKL 355
Query: 361 GLFDNTPVRNALIDMYAKCH---LVSDARYVFETT-----VQKDVVSWNSFISGCAQSGS 412
+ D P I + C LVS R F+ ++ + + I ++G
Sbjct: 356 NINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGR 415
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
EALE+ M+ ++ D +L+AC G L L A+K+ LV+ + G
Sbjct: 416 FDEALEVMSTMKMKA----DEAIWGSLLNACKIHGHLDLAE----VAVKN-LVALNPNNG 466
Query: 473 ---TALLNFYAKCGDAKSARMVFDGMGEKNA 500
+ N Y + G+ + AR + +NA
Sbjct: 467 GYVAMMANLYGEMGNWEEARRARKMIKHQNA 497
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 151/377 (40%), Gaps = 47/377 (12%)
Query: 179 ARKVFDEIAERNVVSWTSMFVAY-----VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
AR +FD + N + ++ AY + A RL + N F ++
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLM--VNRSVPRPNHFIYPLVL 133
Query: 234 TACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK-CGDIGDARKVFDEMLTSDD 292
+ L S VH ++ KSG H+ + T+LL+ Y I AR++FDEM
Sbjct: 134 KSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEM----S 189
Query: 293 ELDLVSWTAMIVGYSQRGHPLKALELFTDR------NWAGIL------------------ 328
E ++VSWTAM+ GY++ G A+ LF D +W IL
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 329 --------PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCH 380
PN + +H + L + V N+L+D+Y KC
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 381 LVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS--PPDAVTVVG 438
+ +A VF+ +K + +WNS I+ A G + EA+ +F+ M + + PD +T +G
Sbjct: 310 NLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIG 369
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK 498
+L+AC G + G + I L++ + G A V M K
Sbjct: 370 LLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK 429
Query: 499 -NAVTWSAMISGYGMQG 514
+ W ++++ + G
Sbjct: 430 ADEAIWGSLLNACKIHG 446
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 9/215 (4%)
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS--AYEALEMFQRMRSESFSPPDAVTV 436
C+L S AR++F+ + + + ++ + S A A F+ M + S P+
Sbjct: 71 CNL-SYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIY 129
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK-CGDAKSARMVFDGM 495
VL + L + +H K G + V TALL+ YA AR +FD M
Sbjct: 130 PLVLKSTPYLSSAFSTPLVHTHLFKSGF-HLYVVVQTALLHSYASSVSHITLARQLFDEM 188
Query: 496 GEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGS 555
E+N V+W+AM+SGY GD ++ALF DM + + + ++LAAC+ +G+ E
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPS----WNAILAACTQNGLFLEAV 244
Query: 556 RLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA 590
LF M E + P+ C++ A+ G L+ A
Sbjct: 245 SLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 231/465 (49%), Gaps = 43/465 (9%)
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD---ARKVFDEMLTSDDELDLVSWTAMIV 304
+H ++++ +H ++ L +++ CG + + A +VF + + ++ + AMI
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISI---CGSLSNSDYANRVFSHIQNPN----VLVFNAMIK 75
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
YS G PL++L F+ GI + G +HG +++ G
Sbjct: 76 CYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHR 135
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVV-------------------------- 398
+R ++++Y + DA+ VF+ +++VV
Sbjct: 136 LGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMS 195
Query: 399 -----SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGS 453
SWNS IS ++ G EALE+F M + F P D TVV VL ASLG L G
Sbjct: 196 ERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP-DEATVVTVLPISASLGVLDTGK 254
Query: 454 SIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQ 513
IH+ A GL I VG AL++FY K GD ++A +F M +N V+W+ +ISG +
Sbjct: 255 WIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVN 314
Query: 514 GDGVGSIALFRDMLKE-ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMK 572
G G I LF M++E + PNE F VLA CS++G V G LF +M +
Sbjct: 315 GKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTE 374
Query: 573 HYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLEL 632
HY MVDL++R+G + EA F+ MPV +++G+ L C H + +L EVA ++++
Sbjct: 375 HYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKI 434
Query: 633 HPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
P + YVL+SNLYA +GRW V++VR ++K+ L K G S +
Sbjct: 435 EPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 161/377 (42%), Gaps = 32/377 (8%)
Query: 171 SKCGHVCS---ARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDF 227
S CG + + A +VF I NV+ + +M Y +E L F+ M+ + +++
Sbjct: 44 SICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEY 103
Query: 228 TVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
T L+ +C+ L L GK VHG ++++G H + ++ +Y G +GDA+KVFDEM
Sbjct: 104 TYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 288 LTSD---------------------------DELDLVSWTAMIVGYSQRGHPLKALELFT 320
+ E +VSW +MI S+ G +ALELF
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 321 DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF-DNTPVRNALIDMYAKC 379
+ G P+ G +H GLF D V NAL+D Y K
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 380 HLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGV 439
+ A +F +++VVSWN+ ISG A +G +++F M E P+ T +GV
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGV 343
Query: 440 LSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EK 498
L+ C+ G + G + ++ + A+++ ++ G A M
Sbjct: 344 LACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA 403
Query: 499 NAVTWSAMISGYGMQGD 515
NA W +++S GD
Sbjct: 404 NAAMWGSLLSACRSHGD 420
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 179/404 (44%), Gaps = 47/404 (11%)
Query: 49 KFHASLIVHGFPGDTKLL----SLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
+ HA L+ H G LL S+ S +A R+F H+ +PN+ F AM++ Y L
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 105 LHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSD-GFVL 163
+ +SF+ + + G + D ++ +LK+CS L D+ +H +I++G G +
Sbjct: 82 PPLESLSFFSSMK-SRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 164 NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE---- 219
G+V+ Y+ G + A+KVFDE++ERNVV W M + + GL LF +M E
Sbjct: 141 IGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV 200
Query: 220 ----------------------------GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGY 251
GF D ++ TV +++ LG L GKW+H
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGF-DPDEATVVTVLPISASLGVLDTGKWIHST 259
Query: 252 VVKSGIHVNSF-LATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRG 310
SG+ + + +L++ Y K GD+ A +F +M ++VSW +I G + G
Sbjct: 260 AESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM----QRRNVVSWNTLISGSAVNG 315
Query: 311 HPLKALELFTDRNWAG-ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV-KCGLFDNTPV 368
++LF G + PN G L GL++ + L T
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 369 RNALIDMYAKCHLVSDA-RYVFETTVQKDVVSWNSFISGCAQSG 411
A++D+ ++ +++A +++ V + W S +S C G
Sbjct: 376 YGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 230/441 (52%), Gaps = 11/441 (2%)
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
SL+ C L ++ G VH + + N +++ L+ +Y CG A +VFD M
Sbjct: 96 ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSK 155
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
D +W ++I GY++ G A+ L+ G+ P+ +
Sbjct: 156 RDS--SPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G +H +VK G + V NAL+ MYAKC + AR VF+ KD VSWNS ++G
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
G +EAL++F+ M P D V + VL+ S G +H + ++ G+ +
Sbjct: 274 HGLLHEALDIFRLMVQNGIEP-DKVAISSVLARVLSFKH---GRQLHGWVIRRGM-EWEL 328
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE 529
V AL+ Y+K G A +FD M E++ V+W+A+IS + +G + F M +
Sbjct: 329 SVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRA 385
Query: 530 ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKE 589
+P+ + F SVL+ C+++GMV +G RLF +M +E P M+HYACMV+L RAG ++E
Sbjct: 386 NAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEE 445
Query: 590 ALDFI-DKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYA 648
A I +M ++ G +V+GA L+ C LH ++GEVA +R+ EL PD + L+ +Y+
Sbjct: 446 AYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYS 505
Query: 649 SDGRWGMVKQVREMIKQRGLN 669
R V++VR+M+ RGL
Sbjct: 506 KAKRAEDVERVRQMMVDRGLE 526
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 213/442 (48%), Gaps = 23/442 (5%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSARKVFDE 185
+F+ +L+ C LR + R+H H+I ++ + + LV Y+ CG+ A +VFD
Sbjct: 94 IFASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDR 152
Query: 186 IAERNV--VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
+++R+ +W S+ Y + + + L+ +M E V + FT ++ AC +GS+
Sbjct: 153 MSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
G+ +H +VK G + ++ +L+ MY KCGDI AR VFD + D VSW +M+
Sbjct: 213 IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI----PHKDYVSWNSML 268
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
GY G +AL++F GI P+ G LHG V++ G+
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGME 325
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
V NALI +Y+K + A ++F+ +++D VSWN+ IS +++ + + E R
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRA 385
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
++ PD +T V VLS CA+ G + G + + K+ + + ++N Y + G
Sbjct: 386 NAK----PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAG 441
Query: 484 DAKSA-RMVFDGMG-EKNAVTWSAMISGYGMQGD-GVGSIALFRDMLKEECEP-NEVVFT 539
+ A M+ MG E W A++ + G+ +G +A R E EP NE F
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLF---ELEPDNEHNFE 498
Query: 540 SVLAACSHSGMVGEGSRLFHMM 561
++ S + + R+ MM
Sbjct: 499 LLIRIYSKAKRAEDVERVRQMM 520
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 11/258 (4%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSF--KAMLRWYFLNNLHSDVVSFYHLTRYTL 120
+KL+ LYAS G+ A +FD + + F +++ Y + D ++ Y
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY-FQMAED 189
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSA 179
G D F VLKAC + V +H ++K G D +VLN LV Y+KCG + A
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
R VFD I ++ VSW SM Y+ + E L +F M + ++ + + S++ ++
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARV 306
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
S G+ +HG+V++ G+ +A +L+ +Y K G +G A +FD+ML E D VSW
Sbjct: 307 LSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQML----ERDTVSW 362
Query: 300 TAMIVGYSQRGHPLKALE 317
A+I +S+ + LK E
Sbjct: 363 NAIISAHSKNSNGLKYFE 380
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 16/249 (6%)
Query: 41 CKNIDTVK---KFHASLIVHGFPGDTKLLS----LYASFGFLRHARRLFDHLPSPNLHSF 93
C I +V+ H L+ GF D +L+ +YA G + AR +FD +P + S+
Sbjct: 205 CGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSW 264
Query: 94 KAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVI 153
+ML Y + L + + + L G D V S VL + +LH VI
Sbjct: 265 NSMLTGYLHHGLLHEALDIFRLMVQN-GIEPDKVAISSVLARVLSFK---HGRQLHGWVI 320
Query: 154 KSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR 212
+ G + V N L+ YSK G + A +FD++ ER+ VSW ++ A+ +N GL+
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLK 377
Query: 213 LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS-GIHVNSFLATSLLNMY 271
F +M + T S+++ C G + G+ + + K GI ++N+Y
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLY 437
Query: 272 VKCGDIGDA 280
+ G + +A
Sbjct: 438 GRAGMMEEA 446
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 237/458 (51%), Gaps = 19/458 (4%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNS-----FLATSLLNMYVKCGDIGDARKVFD 285
SL+ + T G LH + +H ++++ + NS FL+ L++ + DI + +VF
Sbjct: 16 SLIVSST--GKLHL-RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR--DINYSCRVFS 70
Query: 286 EMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILP-NXXXXXXXXXXXXXX 344
+ L L MI +S P + LF LP N
Sbjct: 71 QRLNPT----LSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 345 XXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFI 404
G+ +HG + G ++ + L+D+Y+ C +DA VF+ ++D VSWN
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 405 SGCAQSGSAYEALEMFQRMRSE--SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
S ++ + L +F +M+++ PD VT + L ACA+LGAL G +H F ++
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIAL 522
GL S ++ + L++ Y++CG A VF GM E+N V+W+A+ISG M G G +I
Sbjct: 247 GL-SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEA 305
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF-HMMCRELNFVPSMKHYACMVDLL 581
F +MLK P E T +L+ACSHSG+V EG F M E P++ HY C+VDLL
Sbjct: 306 FNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLL 365
Query: 582 ARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYV 641
RA L +A I M ++P +++ L C +H + ELGE I ++EL ++A YV
Sbjct: 366 GRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYV 425
Query: 642 LVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
L+ N Y++ G+W V ++R ++K++ ++ PGCS +E+
Sbjct: 426 LLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIEL 463
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 9/276 (3%)
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF-VDGNDFTVGSLVTACTKL 239
+VF + + +M A+ + EG RLF +R + N + + C K
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
G L G +HG + G +S L T+L+++Y C + DA KVFDE+ + D VSW
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEI----PKRDTVSW 182
Query: 300 TAMIVGYSQRGHPLKALELFTD-RNWAG--ILPNXXXXXXXXXXXXXXXXXXMGMLLHGL 356
+ Y + L LF +N + P+ G +H
Sbjct: 183 NVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDF 242
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
+ + GL + N L+ MY++C + A VF +++VVSW + ISG A +G EA
Sbjct: 243 IDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEA 302
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
+E F M SP + T+ G+LSAC+ G + G
Sbjct: 303 IEAFNEMLKFGISPEEQ-TLTGLLSACSHSGLVAEG 337
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 14/251 (5%)
Query: 4 APCSLFHSSKSLIQFRSLSSYIAFTLPHPPTLYLSPICKNIDTVK--KFHASLIVHGFPG 61
PC F +SL + SL + P + L K+ D + + H + GF
Sbjct: 92 TPCEGFRLFRSLRRNSSLPAN-----PLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLS 146
Query: 62 D----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTR 117
D T L+ LY++ A ++FD +P + S+ + Y N DV+ + +
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 118 YTLG--FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCG 174
+ D V + L+AC+ L + ++H + ++G S L N LV YS+CG
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCG 266
Query: 175 HVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVT 234
+ A +VF + ERNVVSWT++ N E + FN M + + + T+ L++
Sbjct: 267 SMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLS 326
Query: 235 ACTKLGSLHQG 245
AC+ G + +G
Sbjct: 327 ACSHSGLVAEG 337
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 182/650 (28%), Positives = 296/650 (45%), Gaps = 64/650 (9%)
Query: 58 GFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTR 117
GF K L+ G++ AR +F+ L + N ++ M+ Y + + +
Sbjct: 39 GFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP 98
Query: 118 YTLGFFHDLVVFSIVLK---ACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKC 173
D+V ++ ++ +C +R + +A +L + PS D F N ++ Y+K
Sbjct: 99 K-----RDVVTWNTMISGYVSCGGIRFLEEARKLFDEM----PSRDSFSWNTMISGYAKN 149
Query: 174 GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
+ A +F+++ ERN VSW++M + QN + LF +M + + +LV
Sbjct: 150 RRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALV 205
Query: 234 TACTKLGSLHQGKWVHGYV--VKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM--LT 289
K L + WV G + SG + +L+ Y + G + AR +FD++ L
Sbjct: 206 AGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLC 265
Query: 290 SDDE---------LDLVSWTAMIVGYSQRGHPLKALELF---TDRN---WAGILPNXXXX 334
DD ++VSW +MI Y + G + A LF DR+ W ++
Sbjct: 266 GDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHV 325
Query: 335 XXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA-----LIDMYAKCHLVSDARYVF 389
LF P R+A ++ YA V AR+ F
Sbjct: 326 SRMEDAF-------------------ALFSEMPNRDAHSWNMMVSGYASVGNVELARHYF 366
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
E T +K VSWNS I+ ++ EA+++F RM E PD T+ +LSA L L
Sbjct: 367 EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG-EKPDPHTLTSLLSASTGLVNL 425
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMIS 508
LG +H +K V + V AL+ Y++CG+ +R +FD M ++ +TW+AMI
Sbjct: 426 RLGMQMHQIVVK--TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Query: 509 GYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
GY G+ ++ LF M P+ + F SVL AC+H+G+V E F M
Sbjct: 484 GYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIE 543
Query: 569 PSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRR 628
P M+HY+ +V++ + G +EA+ I MP +P +V+GA L C +++ L VA
Sbjct: 544 PQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEA 603
Query: 629 MLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
M L P+ + YVL+ N+YA G W QVR ++ + + K G S V+
Sbjct: 604 MSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 234/451 (51%), Gaps = 19/451 (4%)
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM--YVKCGDIGDARKVFDEMLTSDDE 293
C+ + L Q +HG + S + +SF+ + L+ + D+ AR + +L S D
Sbjct: 23 CSSIKHLLQ---IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTL---LLHSSDS 76
Query: 294 LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLL 353
+W + GYS P++++ ++++ GI PN G +
Sbjct: 77 TP-STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 354 HGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSA 413
V+K G + V N LI +Y C SDAR VF+ +++VVSWNS ++ ++G
Sbjct: 136 QVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 414 YEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL-VSCSIYVG 472
E F M + F P D T+V +LSAC G L LG +H+ + L ++C + G
Sbjct: 196 NLVFECFCEMIGKRFCP-DETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRL--G 250
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE-C 531
TAL++ YAK G + AR+VF+ M +KN TWSAMI G G ++ LF M+KE
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 532 EPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEAL 591
PN V F VL ACSH+G+V +G + FH M + P M HY MVD+L RAG L EA
Sbjct: 311 RPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
Query: 592 DFIDKMPVQPGVSVFGAYLHGCGLHSEFE---LGEVAIRRMLELHPDQACYYVLVSNLYA 648
DFI KMP +P V+ L C +H + + +GE +R++EL P ++ V+V+N +A
Sbjct: 371 DFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFA 430
Query: 649 SDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
W +VR ++K+ + K+ G S +E+
Sbjct: 431 EARMWAEAAEVRRVMKETKMKKIAGESCLEL 461
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 19/398 (4%)
Query: 131 IVLKACSELRDVVQAARLHCHV-IKSGPSDGFVLNGLV--DAYSKCGHVCSARKVFDEIA 187
I LK CS ++ ++Q +H + + S +D F+++ LV + S + AR + +
Sbjct: 18 IFLKLCSSIKHLLQ---IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSS 74
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
+ +W + Y +D VE + +++ M+ + N T L+ AC L G+
Sbjct: 75 DSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
+ V+K G + ++ +L+++Y C DARKVFDEM E ++VSW +++
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM----TERNVVSWNSIMTALV 190
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
+ G E F + P+ +G L+H V+ L N
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPD--ETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCR 248
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES 427
+ AL+DMYAK + AR VFE V K+V +W++ I G AQ G A EAL++F +M ES
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 428 FSPPDAVTVVGVLSACASLGALPLG-SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
P+ VT +GVL AC+ G + G H + I+ G A+++ + G
Sbjct: 309 SVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYG-AMVDILGRAGRLN 367
Query: 487 SARMVFDGMG-EKNAVTWSAMISGYGMQGD----GVGS 519
A M E +AV W ++S + D G+G
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGE 405
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 61/419 (14%)
Query: 40 ICKNIDTVKKFHASLIVHGFPGDTKL---------LSLYASFGFLRHARRLFDHLPSPNL 90
+C +I + + H + + D+ + LSL F AR L H
Sbjct: 22 LCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAF---ARTLLLHSSDSTP 78
Query: 91 HSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHC 150
++ + R Y ++ + + Y + G + + F +LKAC+ + ++
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRR-GIKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 151 HVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVE 209
V+K G D +V N L+ Y C ARKVFDE+ ERNVVSW S+ A V+N
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 210 GLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLN 269
F M ++ T+ L++AC G+L GK VH V+ + +N L T+L++
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVD 255
Query: 270 MYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD-RNWAGIL 328
MY K G + AR VF+ M+ ++ +W+AMIVG +Q G +AL+LF+ + +
Sbjct: 256 MYAKSGGLEYARLVFERMVDK----NVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 329 PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC---GLFDNTPVRNALIDMYAKCHLVSDA 385
PN + G++ C GL D D Y H +
Sbjct: 312 PNY-------------------VTFLGVLCACSHTGLVD---------DGYKYFHEMEKI 343
Query: 386 RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
++ ++ + + + ++G EA + ++M E PDAV +LSAC+
Sbjct: 344 H-----KIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFE----PDAVVWRTLLSACS 393
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 249/487 (51%), Gaps = 45/487 (9%)
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK-------CGDIGDARKV 283
+L+ +C+ L K +HG+++++ + + F+A+ LL + V +G A +
Sbjct: 17 ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
F ++ + L + +I +S P KA +T + I P+
Sbjct: 74 FSQIQNPN----LFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 344 XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSF 403
+G H +V+ G ++ V N+L+ MYA C ++ A +F +DVVSW S
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 404 ISGCAQSGSAYEALEMFQRM----------------RSESFSPP--------------DA 433
++G + G A EMF M ++ F +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 434 VTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD 493
+V V+S+CA LGAL G + + +K + + ++ +GTAL++ + +CGD + A VF+
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHM-TVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 494 GMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGE 553
G+ E ++++WS++I G + G ++ F M+ P +V FT+VL+ACSH G+V +
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 554 GSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGC 613
G ++ M ++ P ++HY C+VD+L RAG L EA +FI KM V+P + GA L C
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGAC 428
Query: 614 GLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPG 673
++ E+ E ++++ P+ + YYVL+SN+YA G+W ++ +R+M+K++ + K PG
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
Query: 674 CSLVEID 680
SL+EID
Sbjct: 489 WSLIEID 495
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 48/340 (14%)
Query: 33 PTLYLSPICKNIDTVKKFHASLIVHGFPGD----TKLLSLY---ASFG----FLRHARRL 81
P L L C + +K H L+ D ++LL+L ++F L +A +
Sbjct: 14 PKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 82 FDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRD 141
F + +PNL F ++R + S FY + + D + F ++KA SE+
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSR-IWPDNITFPFLIKASSEMEC 132
Query: 142 VVQAARLHCHVIKSG-PSDGFVLNGLVDAYS----------------------------- 171
V+ + H +++ G +D +V N LV Y+
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 172 --KCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTV 229
KCG V +AR++FDE+ RN+ +W+ M Y +N+C + + LF M+ V N+ +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
S++++C LG+L G+ + YVVKS + VN L T+L++M+ +CGDI A VF+ +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL-- 310
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILP 329
E D +SW+++I G + GH KA+ F+ G +P
Sbjct: 311 --PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIP 348
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 166/380 (43%), Gaps = 44/380 (11%)
Query: 119 TLGFFHDLVVFSIVLKACSELRD--VVQAARLHCHVIKSGPSDGFVLNGLV------DAY 170
TL F H + +L++CS D ++ L H+I SD FV + L+ +
Sbjct: 8 TLRFKHPKLA---LLQSCSSFSDLKIIHGFLLRTHLI----SDVFVASRLLALCVDDSTF 60
Query: 171 SKCGHVCS-ARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTV 229
+K ++ A +F +I N+ + + + + + +M + + ++ T
Sbjct: 61 NKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITF 120
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
L+ A +++ + G+ H +V+ G + ++ SL++MY CG I A ++F +M
Sbjct: 121 PFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGF 180
Query: 290 SD------------------------DEL---DLVSWTAMIVGYSQRGHPLKALELFTDR 322
D DE+ +L +W+ MI GY++ KA++LF
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 323 NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLV 382
G++ N G + VVK + N + AL+DM+ +C +
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 383 SDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSA 442
A +VFE + D +SW+S I G A G A++A+ F +M S F P D VT VLSA
Sbjct: 301 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRD-VTFTAVLSA 359
Query: 443 CASLGALPLGSSIHAFALKD 462
C+ G + G I+ KD
Sbjct: 360 CSHGGLVEKGLEIYENMKKD 379
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 109/228 (47%), Gaps = 5/228 (2%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T +++ Y G + +AR +FD +P NL ++ M+ Y NN + + + G
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE-GV 245
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARK 181
+ V V+ +C+ L + R + +V+KS + +L LVD + +CG + A
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE-GFVDGNDFTVGSLVTACTKLG 240
VF+ + E + +SW+S+ + A + + F++M GF+ D T ++++AC+ G
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIP-RDVTFTAVLSACSHGG 364
Query: 241 SLHQGKWVHGYVVKS-GIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
+ +G ++ + K GI +++M + G + +A +M
Sbjct: 365 LVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 236/482 (48%), Gaps = 48/482 (9%)
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
C + +L K +H ++VK GI LA +L+N+Y KCG A +VFDEM D
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH--- 69
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL-PNXXXXXXXXXXXXXXXXXXMGMLLH 354
++W +++ +Q K L +F+ + L P+ +G + H
Sbjct: 70 -IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACAN-----LGSIDH 123
Query: 355 GLVVKCGLF-----DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G V C ++ V+++L+DMYAKC L++ A+ VF++ K+ +SW + +SG A+
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 410 SGSAYEALEMFQ-------------------------------RMRSESFSPPDAVTVVG 438
SG EALE+F+ MR E D + +
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK 498
++ ACA+L A G +H + G SC +++ AL++ YAKC D +A+ +F M +
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSC-VFISNALIDMYAKCSDVIAAKDIFSRMRHR 302
Query: 499 NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF 558
+ V+W+++I G G ++AL+ DM+ +PNEV F ++ ACSH G V +G LF
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362
Query: 559 HMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSE 618
M ++ PS++HY C++DLL R+G L EA + I MP P + A L C
Sbjct: 363 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Query: 619 FELG-EVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
++G +A + Y+L+SN+YAS WG V + R + + + K PG S V
Sbjct: 423 GQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Query: 678 EI 679
E+
Sbjct: 483 EV 484
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 215/459 (46%), Gaps = 37/459 (8%)
Query: 133 LKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNV 191
L+ C+ R + A LH H++K G L N LV+ Y KCG A +VFDE+ R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 192 VSWTSMFVAYVQNDCAVEGLRLFNRMREGF-VDGNDFTVGSLVTACTKLGSLHQGKWVHG 250
++W S+ A Q + + + L +F+ + + +DF +LV AC LGS+ G+ VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD------------------ 292
+ + S + + +SL++MY KCG + A+ VFD + +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 293 --EL-------DLVSWTAMIVGYSQRGHPLKALELFTD--RNWAGILPNXXXXXXXXXXX 341
EL +L SWTA+I G+ Q G L+A +FT+ R IL +
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDIL-DPLVLSSIVGAC 248
Query: 342 XXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWN 401
G +HGLV+ G + NALIDMYAKC V A+ +F +DVVSW
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 402 SFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK 461
S I G AQ G A +AL ++ M S P+ VT VG++ AC+ +G + G + K
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVK-PNEVTFVGLIYACSHVGFVEKGRELFQSMTK 367
Query: 462 DGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGDGVGSI 520
D + S+ T LL+ + G A + M + TW+A++S QG G I
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 521 ALFRDML---KEECEPNEVVFTSVLAACSHSGMVGEGSR 556
+ ++ K + ++ +++ A+ S G V E R
Sbjct: 428 RIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARR 466
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 198/458 (43%), Gaps = 47/458 (10%)
Query: 32 PPTLYLSPIC---KNIDTVKKFHASLIVHGF----PGDTKLLSLYASFGFLRHARRLFDH 84
P L+ +C + + T K HA ++ G P L+++Y G HA ++FD
Sbjct: 4 PHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDE 63
Query: 85 LPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQ 144
+P + ++ ++L NL +S + + G D VFS ++KAC+ L +
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 145 AARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAY-- 201
++HCH I S +D V + LVD Y+KCG + SA+ VFD I +N +SWT+M Y
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 202 -----------------------------VQNDCAVEGLRLFNRMREGFVDGND-FTVGS 231
VQ+ +E +F MR VD D + S
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
+V AC L + G+ VHG V+ G F++ +L++MY KC D+ A+ +F M
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM---- 299
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM 351
D+VSWT++IVG +Q G KAL L+ D G+ PN G
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 359
Query: 352 -LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFET-TVQKDVVSWNSFISGCAQ 409
L + G+ + L+D+ + L+ +A + T D +W + +S C +
Sbjct: 360 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 419
Query: 410 SGSAYEALEMFQRMRSE-SFSPPDAVTVVGVLSACASL 446
G + + + S P ++ + A ASL
Sbjct: 420 QGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Query: 440 LSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN 499
L CA L ++HA +K G+V C T L+N Y KCG A A VFD M ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANT-LVNVYGKCGAASHALQVFDEMPHRD 68
Query: 500 AVTWSAMISGYGMQG-DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF 558
+ W+++++ G P++ VF++++ AC++ G + G ++
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 559 -HMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
H + E +K + +VD+ A+ G L A D + V+ +S
Sbjct: 129 CHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVKNTIS 173
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 213/420 (50%), Gaps = 9/420 (2%)
Query: 260 NSFLATSLLNMYVKCGDIGDARKVFDEMLTS---DDELDLVSWTAMIVGYSQRGHPLKAL 316
N LAT L N C + R++ ++ S D W ++ Y + PL A+
Sbjct: 47 NKLLATLLSN----CTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAI 102
Query: 317 ELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMY 376
+++ + +LP+ +G LH + V+ G + + I +Y
Sbjct: 103 QVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLY 162
Query: 377 AKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTV 436
K +AR VF+ ++ + SWN+ I G +G A EA+EMF M+ P D T+
Sbjct: 163 CKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD-FTM 221
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCS-IYVGTALLNFYAKCGDAKSARMVFDGM 495
V V ++C LG L L +H L+ S I + +L++ Y KCG A +F+ M
Sbjct: 222 VSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM 281
Query: 496 GEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGS 555
++N V+WS+MI GY G+ + ++ FR M + PN++ F VL+AC H G+V EG
Sbjct: 282 RQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK 341
Query: 556 RLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGL 615
F MM E P + HY C+VDLL+R G LKEA +++MP++P V V+G + GC
Sbjct: 342 TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
Query: 616 HSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCS 675
+ E+ E M+EL P YV+++N+YA G W V++VR+++K + + K+P S
Sbjct: 402 FGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 177/365 (48%), Gaps = 25/365 (6%)
Query: 166 LVDAYSKCGHVCSARKVFDEIAERNVVS-------WTSMFVAYVQNDCAVEGLRLFNRMR 218
L S C + R++ +I ++ W ++ +Y++++ ++ ++++ M
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
V + +++ ++ A ++ GK +H V+ G + F + + +Y K G+
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFE 169
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXX 338
+ARKVFDE + E L SW A+I G + G +A+E+F D +G+ P+
Sbjct: 170 NARKVFDE----NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 339 XXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR--NALIDMYAKCHLVSDARYVFETTVQKD 396
+ LH V++ + + + N+LIDMY KC + A ++FE Q++
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIH 456
VVSW+S I G A +G+ EALE F++MR E P+ +T VGVLSAC G + G +
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMR-EFGVRPNKITFVGVLSACVHGGLVEEGKTYF 344
Query: 457 A-----FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAMISGY 510
A F L+ GL S Y +++ ++ G K A+ V + M K N + W ++ G
Sbjct: 345 AMMKSEFELEPGL---SHY--GCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGC 399
Query: 511 GMQGD 515
GD
Sbjct: 400 EKFGD 404
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 36/349 (10%)
Query: 80 RLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFY-HLTRYTLGFFHDLVVFSIVLKACSE 138
R+ D P L + ++R Y + D + Y + R T+ D IV+KA +
Sbjct: 74 RILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTV--LPDRYSLPIVIKAAVQ 129
Query: 139 LRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSM 197
+ D LH ++ G D F +G + Y K G +ARKVFDE ER + SW ++
Sbjct: 130 IHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAI 189
Query: 198 FVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGI 257
A E + +F M+ ++ +DFT+ S+ +C LG L +H V+++
Sbjct: 190 IGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKT 249
Query: 258 HVNS--FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKA 315
S + SL++MY KCG + A +F+EM + ++VSW++MIVGY+ G+ L+A
Sbjct: 250 EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM----RQRNVVSWSSMIVGYAANGNTLEA 305
Query: 316 LELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL---------FDNT 366
LE F G+ PN + +HG +V+ G F+
Sbjct: 306 LECFRQMREFGVRPN-----------KITFVGVLSACVHGGLVEEGKTYFAMMKSEFELE 354
Query: 367 PVRN---ALIDMYAKCHLVSDARYVFETTVQK-DVVSWNSFISGCAQSG 411
P + ++D+ ++ + +A+ V E K +V+ W + GC + G
Sbjct: 355 PGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K+ H+ + GF GD + ++LY G +AR++FD P L S+ A++
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHA 196
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG---PSDG 160
++ V + + + G D V +C L D+ A +LH V+++ SD
Sbjct: 197 GRANEAVEMFVDMKRS-GLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 161 FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREG 220
+LN L+D Y KCG + A +F+E+ +RNVVSW+SM V Y N +E L F +MRE
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 221 FVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA--TSLLNMYVKCGDIG 278
V N T +++AC G + +GK + ++KS + L+ ++++ + G +
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 279 DARKVFDEM 287
+A+KV +EM
Sbjct: 375 EAKKVVEEM 383
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 191/325 (58%), Gaps = 7/325 (2%)
Query: 362 LFDNTPVRN-----ALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
+FD P R+ A+I YAK V AR +F++ ++D+VSWN I G AQ G +A
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 242
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
L +FQ++ +E PD +TVV LSAC+ +GAL G IH F +K + ++ V T L+
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF-VKSSRIRLNVKVCTGLI 301
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLK-EECEPNE 535
+ Y+KCG + A +VF+ K+ V W+AMI+GY M G ++ LF +M +P +
Sbjct: 302 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD 361
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID 595
+ F L AC+H+G+V EG R+F M +E P ++HY C+V LL RAG LK A + I
Sbjct: 362 ITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIK 421
Query: 596 KMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGM 655
M + ++ + L C LH +F LG+ ++ L+ + YVL+SN+YAS G +
Sbjct: 422 NMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEG 481
Query: 656 VKQVREMIKQRGLNKVPGCSLVEID 680
V +VR ++K++G+ K PG S +EI+
Sbjct: 482 VAKVRNLMKEKGIVKEPGISTIEIE 506
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/529 (27%), Positives = 227/529 (42%), Gaps = 97/529 (18%)
Query: 20 SLSSYIAFTLPHPPTL-YLSPICKNIDTVKKFHASLIVHG------FPG-DTKLLSLYAS 71
S ++ F LP P L L +++D V + HA+++ H +P + KL YAS
Sbjct: 17 STTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYAS 76
Query: 72 FGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSI 131
G +RH+ LF P+L F A + +N L Y + + + FS
Sbjct: 77 HGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLY-VQLLSSEINPNEFTFSS 135
Query: 132 VLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIA--- 187
+LK+CS +H HV+K G D +V GLVD Y+K G V SA+KVFD +
Sbjct: 136 LLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 188 ----------------------------ERNVVSWTSMFVAYVQNDCAVEGLRLFNR-MR 218
ER++VSW M Y Q+ + L LF + +
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 219 EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIG 278
EG ++ TV + ++AC+++G+L G+W+H +V S I +N + T L++MY KCG +
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 279 DARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD-RNWAGILPNXXXXXXX 337
+A VF++ D+V+W AMI GY+ G+ AL LF + + G+ P
Sbjct: 312 EAVLVFNDT----PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT------- 360
Query: 338 XXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK-- 395
+ G + C A LV++ +FE+ Q+
Sbjct: 361 ------------DITFIGTLQAC----------------AHAGLVNEGIRIFESMGQEYG 392
Query: 396 ---DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
+ + +S ++G A E + M ++ D+V VL +C G LG
Sbjct: 393 IKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA----DSVLWSSVLGSCKLHGDFVLG 448
Query: 453 SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAV 501
I + + + + IYV L N YA GD + V + M EK V
Sbjct: 449 KEIAEYLIGLNIKNSGIYV--LLSNIYASVGDYEGVAKVRNLMKEKGIV 495
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 174/386 (45%), Gaps = 34/386 (8%)
Query: 162 VLN-GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREG 220
VLN L AY+ G + + +F + + ++ +T+ N + L+ ++
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 124
Query: 221 FVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDA 280
++ N+FT SL+ +C S GK +H +V+K G+ ++ ++AT L+++Y K GD+ A
Sbjct: 125 EINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSA 180
Query: 281 RKVFDEM----LTSDD-----------------------ELDLVSWTAMIVGYSQRGHPL 313
+KVFD M L S E D+VSW MI GY+Q G P
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 314 KALELFTDRNWAGI-LPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNAL 372
AL LF G P+ G +H V + N V L
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 373 IDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPD 432
IDMY+KC + +A VF T +KD+V+WN+ I+G A G + +AL +F M+ + P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 433 AVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVF 492
+T +G L ACA G + G I ++ + I L++ + G K A
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 493 DGMG-EKNAVTWSAMISGYGMQGDGV 517
M + ++V WS+++ + GD V
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHGDFV 446
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 137/295 (46%), Gaps = 35/295 (11%)
Query: 350 GMLLHGLVVKCGLFDNTPVRN-ALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCA 408
+L H L+ L PV N L YA + + +F T+ D+ + + I+ +
Sbjct: 51 AILRHNLL----LHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS--------------LGALPL--- 451
+G +A ++ ++ S +P + T +L +C++ LG P
Sbjct: 107 INGLKDQAFLLYVQLLSSEINP-NEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVAT 165
Query: 452 ---------GSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVT 502
G + A + D + S+ TA++ YAK G+ ++AR +FD M E++ V+
Sbjct: 166 GLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVS 225
Query: 503 WSAMISGYGMQGDGVGSIALFRDMLKE-ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
W+ MI GY G ++ LF+ +L E + +P+E+ + L+ACS G + E R H+
Sbjct: 226 WNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL-ETGRWIHVF 284
Query: 562 CRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH 616
+ ++K ++D+ ++ G+L+EA+ + P + + + A + G +H
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMH 338
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 260/540 (48%), Gaps = 56/540 (10%)
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA 235
V +++ + SW + Q+ E + ++ M + + V S++ A
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
C K+ ++ GK +H +K+G+ ++ T L+ +Y + G I A+K FD++ E +
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIA----EKN 169
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHG 355
VSW +++ GY + G +A +F +P MG
Sbjct: 170 TVSWNSLLHGYLESGELDEARRVFDK------IPEKDAVSWNLIISSYAKKGDMGN---- 219
Query: 356 LVVKCGLFDNTPVR-----NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISG---- 406
C LF P++ N LI Y C + AR F+ QK+ VSW + ISG
Sbjct: 220 ---ACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKL 276
Query: 407 --------------------------C-AQSGSAYEALEMF-QRMRSESFSPPDAVTVVG 438
C Q+G +AL++F Q + S+ PD +T+
Sbjct: 277 GDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSS 336
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK 498
V+SA + LG G+ + ++ + G + + T+L++ Y K GD A +F + +K
Sbjct: 337 VVSANSQLGNTSFGTWVESYITEHG-IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK 395
Query: 499 NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF 558
+ V++SAMI G G+ G + +LF M++++ PN V FT +L+A SHSG+V EG + F
Sbjct: 396 DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCF 455
Query: 559 HMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSE 618
+ M ++ N PS HY MVD+L RAG L+EA + I MP+QP V+GA L GLH+
Sbjct: 456 NSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNN 514
Query: 619 FELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
E GE+A ++L D Y ++ +Y+S GRW + VR+ IK++ L K GCS VE
Sbjct: 515 VEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 228/510 (44%), Gaps = 43/510 (8%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLL---SLYASFGFLR----HARRLFDHLPSPNLHSF 93
C ++ K+ HA L+V+ + +L +L+ + F R + +R+ + S+
Sbjct: 13 CVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSW 72
Query: 94 KAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVI 153
++R+ + + V Y + + G + VL+AC ++ ++V +H +
Sbjct: 73 GCLVRFLSQHRKFKETVDVY-IDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQAL 131
Query: 154 KSGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR 212
K+G +V GLV YS+ G++ A+K FD+IAE+N VSW S+ Y+++ E R
Sbjct: 132 KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARR 191
Query: 213 LFNRMRE------GFVDGNDFTVGSLVTACTKLGSL---HQGKW---VHGYV-------- 252
+F+++ E + + G + AC+ ++ W + GYV
Sbjct: 192 VFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLA 251
Query: 253 ---VKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
+ N ++++ Y K GD+ A ++F +++ D+L + AMI Y+Q
Sbjct: 252 RTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF-RLMSKKDKL---VYDAMIACYTQN 307
Query: 310 GHPLKALELFT---DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNT 366
G P AL+LF +RN + I P+ G + + + G+ +
Sbjct: 308 GKPKDALKLFAQMLERN-SYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD 366
Query: 367 PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
+ +LID+Y K + A +F +KD VS+++ I GC +G A EA +F M +
Sbjct: 367 LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEK 426
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
PP+ VT G+LSA + G + G ++KD + S +++ + G +
Sbjct: 427 KI-PPNVVTFTGLLSAYSHSGLVQEGYKCFN-SMKDHNLEPSADHYGIMVDMLGRAGRLE 484
Query: 487 SARMVFDGMG-EKNAVTWSAMISGYGMQGD 515
A + M + NA W A++ G+ +
Sbjct: 485 EAYELIKSMPMQPNAGVWGALLLASGLHNN 514
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 222/415 (53%), Gaps = 35/415 (8%)
Query: 299 WTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
W +I G+S +P K++ ++ G+LP+ +G LH VV
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 359 KCGL--------------------------FDNTPVRN-----ALIDMYAKCHLVSDARY 387
K GL FD P +N +++D YAK V AR
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 388 VFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLG 447
VF+ ++DVV+W+S I G + G +ALE+F +M S + VT+V V+ ACA LG
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 448 ALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVF--DGMGEKNAVTWSA 505
AL G ++H + L D + ++ + T+L++ YAKCG A VF + E +A+ W+A
Sbjct: 256 ALNRGKTVHRYIL-DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 506 MISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCREL 565
+I G G S+ LF M + + +P+E+ F +LAACSH G+V E F + +E
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KES 373
Query: 566 NFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVA 625
P +HYACMVD+L+RAG +K+A DFI +MP++P S+ GA L+GC H EL E
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 626 IRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
++++EL P YV ++N+YA + ++ + +RE ++++G+ K+ G S++++D
Sbjct: 434 GKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLD 488
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 158/329 (48%), Gaps = 42/329 (12%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLLSLYASF------GFLRHARRLFDHLPSPNLHSFK 94
CK++ + K H LI G + +S SF G + +A + L P + +
Sbjct: 18 CKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWN 77
Query: 95 AMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK 154
++R + + +S Y + G D + + ++K+ S L + LHC V+K
Sbjct: 78 FVIRGFSNSRNPEKSISVY-IQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVK 136
Query: 155 SGPS-DGFVLNGLV-------------------------------DAYSKCGHVCSARKV 182
SG D F+ N L+ DAY+K G V SAR V
Sbjct: 137 SGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLV 196
Query: 183 FDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGS 241
FDE++ER+VV+W+SM YV+ + L +F++M R G N+ T+ S++ AC LG+
Sbjct: 197 FDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGA 256
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
L++GK VH Y++ + + L TSL++MY KCG IGDA VF S E D + W A
Sbjct: 257 LNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVF--YRASVKETDALMWNA 314
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPN 330
+I G + G ++L+LF + I P+
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPD 343
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 37/355 (10%)
Query: 126 LVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDG--FVLNGL-VDAYSKCGHVCSARKV 182
LV SI+ C + ++ ++H +I G S+ FV L A S G V A K
Sbjct: 8 LVAKSILRHQCKSMSELY---KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKF 64
Query: 183 FDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL 242
++++ W + + + + + ++ +M + + T L+ + ++L +
Sbjct: 65 LSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNR 124
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM--------------- 287
G +H VVKSG+ + F+ +L++MY D ARK+FDEM
Sbjct: 125 KLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 184
Query: 288 ----------LTSDD--ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG-ILPNXXXX 334
L D+ E D+V+W++MI GY +RG KALE+F G N
Sbjct: 185 AKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 244
Query: 335 XXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF--ETT 392
G +H ++ L ++ +LIDMYAKC + DA VF +
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 304
Query: 393 VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLG 447
+ D + WN+ I G A G E+L++F +MR ES PD +T + +L+AC+ G
Sbjct: 305 KETDALMWNAIIGGLASHGFIRESLQLFHKMR-ESKIDPDEITFLCLLAACSHGG 358
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 242/500 (48%), Gaps = 61/500 (12%)
Query: 233 VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG----DIGDARKVFDEML 288
+ C + L Q +H +KSG ++ A +L D+ A K+F++M
Sbjct: 30 INNCRTIRDLSQ---IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM- 85
Query: 289 TSDDELDLVSWTAMIVGYSQ--RGHPLKALELFTDR-NWAGILPNXXXXXXXXXXXXXXX 345
+ + SW +I G+S+ L A+ LF + + + PN
Sbjct: 86 ---PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 346 XXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV------------ 393
G +HGL +K G + V + L+ MY C + DAR +F +
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 394 ---------------------------------QKDVVSWNSFISGCAQSGSAYEALEMF 420
Q+ VVSWN+ ISG + +G +A+E+F
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+ M+ P + VT+V VL A + LG+L LG +H +A +D + +G+AL++ Y+
Sbjct: 263 REMKKGDIRP-NYVTLVSVLPAISRLGSLELGEWLHLYA-EDSGIRIDDVLGSALIDMYS 320
Query: 481 KCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
KCG + A VF+ + +N +TWSAMI+G+ + G +I F M + P++V + +
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ 600
+L ACSH G+V EG R F M P ++HY CMVDLL R+G L EA +FI MP++
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440
Query: 601 PGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVR 660
P ++ A L C + E+G+ ++++ P + YV +SN+YAS G W V ++R
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMR 500
Query: 661 EMIKQRGLNKVPGCSLVEID 680
+K++ + K PGCSL++ID
Sbjct: 501 LRMKEKDIRKDPGCSLIDID 520
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 201/468 (42%), Gaps = 70/468 (14%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGF----LRHARRLFDHLPSPNLHS 92
C+ I + + HA I G DT ++L A+ L +A ++F+ +P N S
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 93 FKAMLRWYFLNNLHSDVVS---FYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLH 149
+ ++R + ++ +++ FY + + F VLKAC++ + + ++H
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEF-VEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 150 CHVIKSG-PSDGFVLNGLV----------------------------------------- 167
+K G D FV++ LV
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 168 ----DAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD 223
D Y + G +AR +FD++ +R+VVSW +M Y N + + +F M++G +
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
N T+ S++ A ++LGSL G+W+H Y SGI ++ L ++L++MY KCG I A V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
F+ + ++++W+AMI G++ G A++ F AG+ P+
Sbjct: 332 FERLPRE----NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 344 XXXXXMGMLLHGLVVKC-GLFDNTPVRNALIDMYAKCHLVSDA-RYVFETTVQKDVVSWN 401
G +V GL ++D+ + L+ +A ++ ++ D V W
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 402 SFISGCAQSGSAYEALEMFQRMRS--ESFSPPDAVTVVGVLSACASLG 447
+ + C G+ +EM +R+ + P D+ V + + AS G
Sbjct: 448 ALLGACRMQGN----VEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 256/581 (44%), Gaps = 65/581 (11%)
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
L + + +K G + SAR+VFD + E + V+W +M +Y + E + LF ++R
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
+D++ ++++ C LG++ G+ + V++SG + + SL++MY KC D A K
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 283 VFDEML-TSDDELDLVS----------------------------WTAMIVGYSQRGHPL 313
VF +M S +E+ S W MI G++ G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 314 KALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM-GMLLHGLVVKCGLFDNTPVRNAL 372
L LF + + P+ + G ++H +++K G +N++
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 373 IDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF------------ 420
+ Y K DA E+ VSWNS I C + G +ALE+F
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 421 -------------QRMR-----SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
Q +R +S D VL AC+ L L G IH +
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC 366
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIAL 522
G + YVG AL+N YAKCGD K A F + K+ V+W+ M+ +G+ G ++ L
Sbjct: 367 GFQGYA-YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLA 582
+ +M+ +P+ V F +L CSHSG+V EG +F M ++ + H CM+D+
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 583 RAGNLKEALDFIDK----MPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQAC 638
R G+L EA D + S + L C H ELG + + P +
Sbjct: 486 RGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEM 545
Query: 639 YYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
+VL+SNLY S GRW + VR + +RG+ K PGCS +E+
Sbjct: 546 SFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEV 586
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 210/489 (42%), Gaps = 65/489 (13%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
+K+ SL S G + AR++FD +P + ++ ML Y LH + ++ + R++
Sbjct: 9 SKIASLAKS-GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 123 FHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARK 181
D F+ +L C+ L +V ++ VI+SG V N L+D Y KC SA K
Sbjct: 68 PDDY-SFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 182 VFDEIA--ERNVVSWTSMFVAYVQN-------DCAVE----------------------- 209
VF ++ RN V+W S+ AY+ D VE
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 210 -GLRLFNRMREGFVDGNDFTVGSLVTACTKLGS-LHQGKWVHGYVVKSGIHVNSFLATSL 267
L LF M E + +T SL+ AC+ S + G+ VH ++K+G S+
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 268 LNMYVKCGDIGDARKVFD--EMLTS-------------------------DDELDLVSWT 300
L+ Y K G DA + + E+LT E ++V+WT
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
MI GY + G +AL F + +G+ + G ++HG ++ C
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC 366
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
G V NAL+++YAKC + +A F KD+VSWN+ + G A +AL+++
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
M + PD VT +G+L+ C+ G + G I +KD + + T +++ +
Sbjct: 427 DNMIASGI-KPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 481 KCGDAKSAR 489
+ G A+
Sbjct: 486 RGGHLAEAK 494
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 72 FGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSI 131
G A +F P N+ ++ M+ Y N + F+ + G D +
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFF-VEMMKSGVDSDHFAYGA 342
Query: 132 VLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERN 190
VL ACS L + +H +I G +V N LV+ Y+KCG + A + F +IA ++
Sbjct: 343 VLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 191 VVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHG 250
+VSW +M A+ + A + L+L++ M + ++ T L+T C+ G + +G +
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 251 YVVKS-GIHVNSFLATSLLNMYVKCGDIGDARKV---FDEMLTSDDELDLVSWTAMIVGY 306
+VK I + T +++M+ + G + +A+ + + ++T D + SW ++
Sbjct: 463 SMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVT--DSSNNSSWETLLGAC 520
Query: 307 SQRGH 311
S H
Sbjct: 521 STHWH 525
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 205/384 (53%), Gaps = 14/384 (3%)
Query: 306 YSQRGHPLKALELFTDR--NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
Y + G P+KAL F R + + G +H LV K G
Sbjct: 38 YLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFN 97
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQK-DVVSWNSFISGCAQSGSAYEALEMFQR 422
++ +L+ Y+ V AR VF+ T +K ++V W + IS ++ ++ EA+E+F+R
Sbjct: 98 AVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKR 157
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK-DGLVSCSIYVGTALLNFYAK 481
M +E D V V LSACA LGA+ +G I++ ++K ++ + + +LLN Y K
Sbjct: 158 MEAEKIEL-DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVK 216
Query: 482 CGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE------CEPNE 535
G+ + AR +FD K+ T+++MI GY + G S+ LF+ M + PN+
Sbjct: 217 SGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPND 276
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID 595
V F VL ACSHSG+V EG R F M + N P H+ CMVDL R+G+LK+A +FI+
Sbjct: 277 VTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFIN 336
Query: 596 KMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGM 655
+MP++P ++ L C LH ELGE RR+ EL D YV +SN+YAS G W
Sbjct: 337 QMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDE 396
Query: 656 VKQVREMIKQRGLNKVPGCSLVEI 679
++R+ +++R ++PG S +E+
Sbjct: 397 KSKMRDRVRKR---RMPGKSWIEL 417
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 163/341 (47%), Gaps = 44/341 (12%)
Query: 109 VVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-VLNGLV 167
++ F H R + F V + + ++ + ++H V K G + + LV
Sbjct: 48 LLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLV 107
Query: 168 DAYSKCGHVCSARKVFDEIAER-NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND 226
YS G V AR+VFDE E+ N+V WT+M AY +N+ +VE + LF RM ++ +
Sbjct: 108 GFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDG 167
Query: 227 FTVGSLVTACTKLGSLHQGKWVHGYVVKSG--IHVNSFLATSLLNMYVKCGDIGDARKVF 284
V ++AC LG++ G+ ++ +K + ++ L SLLNMYVK G+ ARK+F
Sbjct: 168 VIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLF 227
Query: 285 DEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFT-----DRNWAGIL-PNXXXXXXXX 338
DE + D+ ++T+MI GY+ G ++LELF D++ ++ PN
Sbjct: 228 DESMRK----DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPN-------- 275
Query: 339 XXXXXXXXXXMGMLL----HGLV------VKCGLFD-NTPVRNA----LIDMYAKCHLVS 383
+G+L+ GLV K + D N R A ++D++ + +
Sbjct: 276 ------DVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 384 DA-RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
DA ++ + ++ + V W + + C+ G+ E+ +R+
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRI 370
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 16/255 (6%)
Query: 48 KKFHASLIVHGFPG----DTKLLSLYASFGFLRHARRLFDHLPSP-NLHSFKAMLRWYFL 102
++ HA + GF T L+ Y+S G + +AR++FD P N+ + AM+ Y
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTE 144
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS---D 159
N + + + D V+ ++ L AC++L V ++ IK D
Sbjct: 145 NENSVEAIELFKRMEAE-KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 160 GFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMR- 218
+ N L++ Y K G ARK+FDE ++V ++TSM Y N A E L LF +M+
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 219 -----EGFVDGNDFTVGSLVTACTKLGSLHQGKW-VHGYVVKSGIHVNSFLATSLLNMYV 272
+ + ND T ++ AC+ G + +GK ++ + +++++
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 273 KCGDIGDARKVFDEM 287
+ G + DA + ++M
Sbjct: 324 RSGHLKDAHEFINQM 338
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 235 bits (600), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 153/506 (30%), Positives = 250/506 (49%), Gaps = 44/506 (8%)
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
L LF +R + ++FT+ ++ + +L + +G+ VHGY VK+G+ +S+++ SL+ M
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILP- 329
Y G I KVFDEM + D+VSW +I Y G A+ +F + L
Sbjct: 91 YASLGKIEITHKVFDEM----PQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKF 146
Query: 330 NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD-NTPVRNALIDMYAKCHL------- 381
+ +G ++ VV F+ + + NAL+DM+ KC
Sbjct: 147 DEGTIVSTLSACSALKNLEIGERIYRFVVT--EFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 382 ------------------------VSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEAL 417
+ +AR +FE + KDVV W + ++G Q EAL
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
E+F+ M++ P D +V +L+ CA GAL G IH + + + V+ VGTAL++
Sbjct: 265 ELFRCMQTAGIRP-DNFVLVSLLTGCAQTGALEQGKWIHGY-INENRVTVDKVVGTALVD 322
Query: 478 FYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVV 537
YAKCG ++A VF + E++ +W+++I G M G ++ L+ +M + +
Sbjct: 323 MYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 538 FTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
F +VL AC+H G V EG ++FH M N P +H +C++DLL RAG L EA + IDKM
Sbjct: 383 FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Query: 598 PVQPG---VSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWG 654
+ V V+ + L + ++ E ++ ++ + + L++++YAS RW
Sbjct: 443 RGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWE 502
Query: 655 MVKQVREMIKQRGLNKVPGCSLVEID 680
V VR +K G+ K PGCS +EID
Sbjct: 503 DVTNVRRKMKDLGIRKFPGCSSIEID 528
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 166/376 (44%), Gaps = 53/376 (14%)
Query: 1 MLVAPCSLFHSS--KSLIQFRSLSSYIAFTLP------HPPTLYLSPICKNIDTVKKFHA 52
+L P L ++ KSL +S + +A +P L + K+I ++K
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 53 SLIVHGFPGD----------TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFL 102
VHG+ L+ +YAS G + ++FD +P ++ S+ ++ Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 103 NNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFV 162
N D + + D L ACS L+++ R++ V+ +
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNR------ 216
N LVD + KCG + AR VFD + ++NV WTSM YV E LF R
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 217 -----MREGFVDGN--------------------DFTVGSLVTACTKLGSLHQGKWVHGY 251
M G+V N +F + SL+T C + G+L QGKW+HGY
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
+ ++ + V+ + T+L++MY KCG I A +VF E+ E D SWT++I G + G
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI----KERDTASWTSLIYGLAMNGM 360
Query: 312 PLKALELFTDRNWAGI 327
+AL+L+ + G+
Sbjct: 361 SGRALDLYYEMENVGV 376
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 160/370 (43%), Gaps = 41/370 (11%)
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHG 355
L+ + M+ + K L LF + G+ P+ G +HG
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
VK GL ++ V N+L+ MYA + VF+ Q+DVVSWN IS +G +
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTAL 475
A+ +F+RM ES D T+V LSAC++L L +G I+ F + + S+ +G AL
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE--FEMSVRIGNAL 188
Query: 476 LNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG---------------DGV--- 517
++ + KCG AR VFD M +KN W++M+ GY G D V
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWT 248
Query: 518 -------------GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRE 564
++ LFR M P+ V S+L C+ +G + +G + H E
Sbjct: 249 AMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINE 307
Query: 565 LNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS----VFGAYLHGC---GLHS 617
+VD+ A+ G ++ AL+ ++ + S ++G ++G L
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 618 EFELGEVAIR 627
+E+ V +R
Sbjct: 368 YYEMENVGVR 377
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 197/685 (28%), Positives = 305/685 (44%), Gaps = 114/685 (16%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLR-----------WYFLNNLHSDVVS 111
T LLS YA G+L AR LF+ +P N+ + AML W + +VVS
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS 140
Query: 112 FYHL---------TRYTLGFFHDLVVFSIV--------------LKACSEL------RDV 142
+ + + + F ++ ++V ++ ++ RDV
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV 200
Query: 143 VQ-AARLHCHVIKSGPSDGFVLNG------------LVDAYSKCGHVCSARKVFDEIAER 189
V A + ++ G + +L G +V Y + G V A ++F E+ ER
Sbjct: 201 VSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER 260
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF--VDGNDFTVGSLVTACTKLGSLHQ--G 245
N+VSWT+M + N+ E L LF M++ V N T+ SL AC LG + G
Sbjct: 261 NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLG 320
Query: 246 KWVHGYVVKSGIHV---NSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
+ +H V+ +G + LA SL++MY G I A+ + +E DL S +
Sbjct: 321 EQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE------SFDLQSCNII 374
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
I Y + G +A LF +
Sbjct: 375 INRYLKNGDLERAETLFE--------------------------------------RVKS 396
Query: 363 FDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQR 422
+ ++ID Y + VS A +F+ KD V+W ISG Q+ EA +
Sbjct: 397 LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSD 456
Query: 423 MRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSC---SIYVGTALLNFY 479
M P ++ V +LS+ + L G IH K +C + + +L++ Y
Sbjct: 457 MVRCGLKPLNSTYSV-LLSSAGATSNLDQGKHIHCVIAKT--TACYDPDLILQNSLVSMY 513
Query: 480 AKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFT 539
AKCG + A +F M +K+ V+W++MI G G ++ LF++ML +PN V F
Sbjct: 514 AKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFL 573
Query: 540 SVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPV 599
VL+ACSHSG++ G LF M + P + HY M+DLL RAG LKEA +FI +P
Sbjct: 574 GVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPF 633
Query: 600 QPGVSVFGAYLHGCGLHSEFE----LGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGM 655
P +V+GA L CGL+ + + E A R+LEL P A +V + N+YA GR M
Sbjct: 634 TPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDM 693
Query: 656 VKQVREMIKQRGLNKVPGCSLVEID 680
K++R+ + +G+ K PGCS V ++
Sbjct: 694 EKEMRKEMGIKGVKKTPGCSWVVVN 718
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 446 LGALPLGSSIHAFALKD-----GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNA 500
L L G +HA L D G ++ +Y T+LL+ YAK G AR++F+ M E+N
Sbjct: 50 LRRLSEGGLVHARHLLDKIPQRGSINRVVY-WTSLLSKYAKTGYLDEARVLFEVMPERNI 108
Query: 501 VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
VT +AM++GY + LFR+M K N V +T +L A G + LF
Sbjct: 109 VTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 561 MCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
M E N V + +V L R G++++A D MP + VS
Sbjct: 164 M-PERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS 202
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 231/444 (52%), Gaps = 10/444 (2%)
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK--CGDIGDARKVFDEMLTSDDELDLV 297
S+ + + +H +V+ +G+ + + LL G + A+ +FD D +
Sbjct: 16 NSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF---DSDPSTS 72
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGIL--PNXXXXXXXXXXXXXXXXXXMGMLLHG 355
W +I G+S PL ++ LF +R + P+ + +HG
Sbjct: 73 DWNYLIRGFSNSSSPLNSI-LFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHG 131
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
V++ G D+ V +L+ Y+ V A VF+ +D+VSWN I + G +
Sbjct: 132 SVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQ 191
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTAL 475
AL M++RM +E D+ T+V +LS+CA + AL +G +H A SC ++V AL
Sbjct: 192 ALSMYKRMGNEGVCG-DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC-VFVSNAL 249
Query: 476 LNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNE 535
++ YAKCG ++A VF+GM +++ +TW++MI GYG+ G GV +I+ FR M+ PN
Sbjct: 250 IDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNA 309
Query: 536 VVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID 595
+ F +L CSH G+V EG F +M + + P++KHY CMVDL RAG L+ +L+ I
Sbjct: 310 ITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIY 369
Query: 596 KMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGM 655
++ L C +H ELGEVA++++++L A YVL++++Y++
Sbjct: 370 ASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQA 429
Query: 656 VKQVREMIKQRGLNKVPGCSLVEI 679
+R++I+ L VPG S +EI
Sbjct: 430 FASMRKLIRSHDLQTVPGWSWIEI 453
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 226/503 (44%), Gaps = 61/503 (12%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLLSLYASF------GFLRHARRLFDHLPS-PNLHSF 93
C ++ ++K H+ +I++G + + F G L HA+ LFDH S P+ +
Sbjct: 15 CNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDW 74
Query: 94 KAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVI 153
++R + ++ + + FY+ + DL F+ LK+C ++ + + +H VI
Sbjct: 75 NYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVI 134
Query: 154 KSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR 212
+SG D V LV YS G V A KVFDE+ R++VSW M + + L
Sbjct: 135 RSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 213 LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYV 272
++ RM V G+ +T+ +L+++C + +L+ G +H F++ +L++MY
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 273 KCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXX 332
KCG + +A VF+ M + D+++W +MI+GY GH ++A+ F +G+ PN
Sbjct: 255 KCGSLENAIGVFNGM----RKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN-- 308
Query: 333 XXXXXXXXXXXXXXXXMGMLL---HGLVVKCG------------LFDNTPVRNALIDMYA 377
+G+LL H +VK G L N ++D+Y
Sbjct: 309 ------------AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYG 356
Query: 378 KC-HLVSDARYVFETTVQKDVVSWNSFISGCA-QSGSAYEALEMFQRMRSESFSPPDAVT 435
+ L + ++ ++ +D V W + + C + M + ++ E+F+ D V
Sbjct: 357 RAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVL 416
Query: 436 VVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM 495
+ + SA + AFA L+ S + T + + GD +V D M
Sbjct: 417 MTSIYSA---------ANDAQAFASMRKLIR-SHDLQTVPGWSWIEIGDQVHKFVVDDKM 466
Query: 496 GEKNAVTWS--------AMISGY 510
++AV +S A+++GY
Sbjct: 467 HPESAVIYSELGEVINRAILAGY 489
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 195/424 (45%), Gaps = 22/424 (5%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSG----PSDGFVLNGLVD--AYSKCGHVCSARKVFDE 185
+L+ C+ ++ + ++H HVI +G PS + N L+ A S G + A+ +FD
Sbjct: 11 MLQGCNSMKKL---RKIHSHVIINGLQHHPS---IFNHLLRFCAVSVTGSLSHAQLLFDH 64
Query: 186 I-AERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND-FTVGSLVTACTKLGSLH 243
++ + W + + + + + +NRM V D FT + +C ++ S+
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
+ +HG V++SG ++ +ATSL+ Y G + A KVFDEM DLVSW MI
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVR----DLVSWNVMI 180
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
+S G +AL ++ G+ + MG++LH +
Sbjct: 181 CCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCE 240
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
V NALIDMYAKC + +A VF ++DV++WNS I G G EA+ F++M
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
+ P+A+T +G+L C+ G + G ++ ++ +++ Y + G
Sbjct: 301 VASGVR-PNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAG 359
Query: 484 D-AKSARMVFDGMGEKNAVTWSAMISGYGMQGD-GVGSIALFRDMLKEECEPNE-VVFTS 540
S M++ ++ V W ++ + + +G +A+ + + E + V+ TS
Sbjct: 360 QLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTS 419
Query: 541 VLAA 544
+ +A
Sbjct: 420 IYSA 423
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 223/440 (50%), Gaps = 17/440 (3%)
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
+H +K G ++F L+ YVK +I ARK+FDEM E ++VSWT++I GY+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMC----EPNVVSWTSVISGYN 106
Query: 308 QRGHPLKALELFT----DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
G P AL +F DR + PN +G +H + GL
Sbjct: 107 DMGKPQNALSMFQKMHEDR---PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR 163
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQ--KDVVSWNSFISGCAQSGSAYEALEMFQ 421
N V ++L+DMY KC+ V AR VF++ + ++VVSW S I+ AQ+ +EA+E+F+
Sbjct: 164 RNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR 223
Query: 422 RMRSESFSP-PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+ S + + V+SAC+SLG L G H + G S ++ V T+LL+ YA
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTV-VATSLLDMYA 282
Query: 481 KCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
KCG A +F + + +++++MI G G ++ LF +M+ PN V
Sbjct: 283 KCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLG 342
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPV- 599
VL ACSHSG+V EG +M + VP +HY C+VD+L R G + EA + + V
Sbjct: 343 VLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVG 402
Query: 600 -QPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQ 658
+ G ++GA L LH E+ A +R+++ + Y+ +SN YA G W +
Sbjct: 403 AEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSES 462
Query: 659 VREMIKQRGLNKVPGCSLVE 678
+R +K+ G K CS +E
Sbjct: 463 LRLEMKRSGNVKERACSWIE 482
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 141/290 (48%), Gaps = 13/290 (4%)
Query: 50 FHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNL 105
H + GF DT L+ Y + AR+LFD + PN+ S+ +++ Y
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 106 HSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNG 165
+ +S + + F+ V KACS L + +H + SG V++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 166 -LVDAYSKCGHVCSARKVFDEIAE--RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
LVD Y KC V +AR+VFD + RNVVSWTSM AY QN E + LF
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 223 D--GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDA 280
N F + S+++AC+ LG L GK HG V + G N+ +ATSLL+MY KCG + A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
K+F + ++S+T+MI+ ++ G A++LF + I PN
Sbjct: 291 EKIFLRIRCH----SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPN 336
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 156/353 (44%), Gaps = 45/353 (12%)
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG 411
LLH L +K G +T N L+ Y K ++ AR +F+ + +VVSW S ISG G
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYV 471
AL MFQ+M + PP+ T V AC++L +G +IHA GL +I V
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRR-NIVV 168
Query: 472 GTALLNFYAKCGDAKSARMVFDGM--GEKNAVTWSAMISGYGMQGDGVGSIALFR--DML 527
++L++ Y KC D ++AR VFD M +N V+W++MI+ Y G +I LFR +
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 528 KEECEPNEVVFTSVLAACSH----------SGMVGEG----------------SRLFHMM 561
N+ + SV++ACS G+V G ++ +
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 562 CRELNFVP----SMKHYACMVDLLARAGNLKEALDFIDKM---PVQPGVSVFGAYLHGCG 614
C E F+ S+ Y M+ A+ G + A+ D+M + P LH C
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 615 LHSEFELGEVAIRRMLELH---PDQACYYVLVSNLYASDGRWGMVKQVREMIK 664
G + M E + PD Y +V L GR+G V + E+ K
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDML----GRFGRVDEAYELAK 397
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 193/332 (58%), Gaps = 4/332 (1%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G H L +K G + + ++L+ +Y V +A VFE +++VVSW + ISG AQ
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
L+++ +MR +S S P+ T +LSAC GAL G S+H L GL S +
Sbjct: 199 EWRVDICLKLYSKMR-KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKS-YL 256
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML-K 528
++ +L++ Y KCGD K A +FD K+ V+W++MI+GY G + +I LF M+ K
Sbjct: 257 HISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPK 316
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
+P+ + + VL++C H+G+V EG + F++M E P + HY+C+VDLL R G L+
Sbjct: 317 SGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 589 EALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYA 648
EAL+ I+ MP++P ++G+ L C +H + G A L L PD A +V ++NLYA
Sbjct: 376 EALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYA 435
Query: 649 SDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
S G W VR+++K +GL PGCS +EI+
Sbjct: 436 SVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 183/379 (48%), Gaps = 17/379 (4%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSA 179
G+ D S +++C RD + HC +K G SD ++ + LV Y G V +A
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
KVF+E+ ERNVVSWT+M + Q L+L+++MR+ D ND+T +L++ACT
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
G+L QG+ VH + G+ ++ SL++MY KCGD+ DA ++FD+ D+VSW
Sbjct: 235 GALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK----DVVSW 290
Query: 300 TAMIVGYSQRGHPLKALELFT-DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
+MI GY+Q G ++A+ELF +G P+ G L+
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK-DVVSWNSFISGCAQSGSAYEAL 417
+ GL + L+D+ + L+ +A + E K + V W S + C G + +
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 418 EMF-QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS---CS-IYVG 472
+R+ E P A T V + + AS+G +++ GL + CS I +
Sbjct: 411 RAAEERLMLE---PDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 473 TALLNFYAKCGDAKSARMV 491
+ F A+ D + RM+
Sbjct: 468 NYVFMFKAE--DGSNCRML 484
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 226/439 (51%), Gaps = 40/439 (9%)
Query: 277 IGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXX 336
I +A KVFDE+ ELD++S TA+I + + ++A + F GI PN
Sbjct: 43 IRNAHKVFDEI----PELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGT 98
Query: 337 XXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV--- 393
+G LH +K GL N V +A+++ Y K ++DAR F+ T
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN 158
Query: 394 ----------------------------QKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
++ VV+WN+ I G +Q+G EA+ F M
Sbjct: 159 VVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLR 218
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
E P+ T ++A +++ + G SIHA A+K +++V +L++FY+KCG+
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 486 KSARMVFDGMGE--KNAVTWSAMISGYGMQGDGVGSIALFRDMLKE-ECEPNEVVFTSVL 542
+ + + F+ + E +N V+W++MI GY G G ++A+F M+K+ PN V VL
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 543 AACSHSGMVGEGSRLFHMMCRELN--FVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ 600
AC+H+G++ EG F+ + + + ++HYACMVD+L+R+G KEA + I MP+
Sbjct: 339 FACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 601 PGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVR 660
PG+ + A L GC +HS L ++A ++LEL P YV++SN Y++ W V +R
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 661 EMIKQRGLNKVPGCSLVEI 679
+K+ GL + GCS +E+
Sbjct: 459 RKMKETGLKRFTGCSWIEV 477
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 47 VKKFH--ASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
++K+H A+ +V P L + +R+A ++FD +P ++ S A++ + +
Sbjct: 13 LRKYHSSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKES 72
Query: 105 LHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVL 163
H + + LG + F V+ + + RDV +LHC+ +K G S+ FV
Sbjct: 73 RHVEASQAFKRL-LCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVG 131
Query: 164 NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM------ 217
+ +++ Y K + AR+ FD+ + NVVS T++ Y++ E L LF M
Sbjct: 132 SAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVV 191
Query: 218 --------------------------REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGY 251
REG V N+ T +TA + + S GK +H
Sbjct: 192 TWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC 251
Query: 252 VVK-SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRG 310
+K G N F+ SL++ Y KCG++ D+ F+++ +++ ++VSW +MI GY+ G
Sbjct: 252 AIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKL--EEEQRNIVSWNSMIWGYAHNG 309
Query: 311 HPLKALELF 319
+A+ +F
Sbjct: 310 RGEEAVAMF 318
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Query: 381 LVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
L+ +A VF+ + DV+S + I + EA + F+R+ P+ T V+
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIR-PNEFTFGTVI 100
Query: 441 SACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNA 500
+ + + LG +H +ALK GL S +++VG+A+LN Y K AR FD + N
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLAS-NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 501 VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
V+ + +ISGY + + +++LFR M E + V + +V+ S +G E F
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAM----PERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 561 MCRELNFVPSMKHYACMVDLLA 582
M RE +P+ + C + ++
Sbjct: 216 MLREGVVIPNESTFPCAITAIS 237
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 40/248 (16%)
Query: 38 SPICKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSF 93
S +++ K+ H + G + + +L+ Y L ARR FD PN+ S
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 94 KAMLRWYFLNNLHSDVVSFYHL---------------------TRYTLGFFHDLV----- 127
++ Y + + +S + + F D++
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 128 -----VFSIVLKACSELRDVVQAARLHCHVIK--SGPSDGFVLNGLVDAYSKCGHVCSAR 180
F + A S + +H IK + FV N L+ YSKCG++ +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 181 KVFDEIAE--RNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACT 237
F+++ E RN+VSW SM Y N E + +F +M ++ + N+ T+ ++ AC
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 238 KLGSLHQG 245
G + +G
Sbjct: 343 HAGLIQEG 350
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 210/418 (50%), Gaps = 35/418 (8%)
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX--XXXXXXXXMGMLLH 354
VSWT+ I ++ G +A + F+D AG+ PN +G LLH
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 355 GLVVKCGLFDN-TPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSA 413
G K GL N V A+I MY+K AR VF+ K+ V+WN+ I G +SG
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 414 YEALEMFQRM----------------------------RSESFS--PPDAVTVVGVLSAC 443
A +MF +M R S PD V ++ L+AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 444 ASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTW 503
+LGAL G +H + L + ++ V +L++ Y +CG + AR VF M ++ V+W
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKN-NVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 504 SAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
+++I G+ G+ S+ FR M ++ +P+ V FT L ACSH G+V EG R F +M
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 564 ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH-SEFELG 622
+ P ++HY C+VDL +RAG L++AL + MP++P V G+ L C H + L
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLA 395
Query: 623 EVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
E ++ + +L+ YV++SN+YA+DG+W ++R +K GL K PG S +EID
Sbjct: 396 ERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 204/491 (41%), Gaps = 83/491 (16%)
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL--GS 241
++ VSWTS +N E + F+ M V+ N T +L++ C GS
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 242 LHQGKWVHGYVVKSGIHVNSFL-ATSLLNMYVKCGDIGDARKVFDEMLTSDD-------- 292
G +HGY K G+ N + T+++ MY K G AR VFD M +
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 293 -------------------ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
E DL+SWTAMI G+ ++G+ +AL F + +G+ P+
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV 393
G+ +H V+ +N V N+LID+Y +C V AR VF
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 394 QKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGS 453
++ VVSWNS I G A +G+A+E+L F++M+ + F PDAVT G L+AC+ +G + G
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK-PDAVTFTGALTACSHVGLVEEGL 327
Query: 454 SIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQ 513
D +S I L++ Y++ G + A + M K
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK--------------- 372
Query: 514 GDGVGSIALFRDMLKEECEPNEVVFTSVLAACS-HSGMVGEGSRLFHMMCRELNFVPSMK 572
PNEVV S+LAACS H + RL + +LN V S
Sbjct: 373 -------------------PNEVVIGSLLAACSNHGNNIVLAERLMKHLT-DLN-VKSHS 411
Query: 573 HYACMVDLLARAGNLKEALDFIDKM-----PVQPGVSVFG------AYLHGCGLHSEFEL 621
+Y + ++ A G + A KM QPG S ++ G H E
Sbjct: 412 NYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVE--- 468
Query: 622 GEVAIRRMLEL 632
IR +LEL
Sbjct: 469 -TTYIREVLEL 478
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 164 NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD 223
N ++D Y + G V +A K+FD++ ER+++SWT+M +V+ E L F M+ V
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
+ + + + ACT LG+L G WVH YV+ N ++ SL+++Y +CG + AR+V
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
F M ++ +VSW ++IVG++ G+ ++L F G P+
Sbjct: 264 FYNM----EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPD-----AVTFTGAL 314
Query: 344 XXXXXMGMLLHGL----VVKCGLFDNTPVRN--ALIDMYAKCHLVSDA-RYVFETTVQKD 396
+G++ GL ++KC + + + L+D+Y++ + DA + V ++ +
Sbjct: 315 TACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPN 374
Query: 397 VVSWNSFISGCAQSGS 412
V S ++ C+ G+
Sbjct: 375 EVVIGSLLAACSNHGN 390
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 38/283 (13%)
Query: 392 TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL--GAL 449
+ + VSW S I+ ++G EA + F M + + P+ +T + +LS C G+
Sbjct: 31 STSETTVSWTSRINLLTRNGRLAEAAKEFSDM-TLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISG 509
LG +H +A K GL + VGTA++ Y+K G K AR+VFD M +KN+VTW+ MI G
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDG 149
Query: 510 YGMQGD-----------------------------GVGSIAL--FRDMLKEECEPNEVVF 538
Y G G AL FR+M +P+ V
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 539 TSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP 598
+ L AC++ G + G H +F +++ ++DL R G ++ A M
Sbjct: 210 IAALNACTNLGALSFG-LWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACY 639
+ VS + + + G + V R+M E PD +
Sbjct: 269 KRTVVS-WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTF 310
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 5/229 (2%)
Query: 69 YASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVV 128
Y G + +A ++FD +P +L S+ AM+ + + + ++ + + G D V
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVA 208
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPSDGF-VLNGLVDAYSKCGHVCSARKVFDEIA 187
L AC+ L + +H +V+ + V N L+D Y +CG V AR+VF +
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
+R VVSW S+ V + N A E L F +M+E + T +TAC+ +G + +G
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG-L 327
Query: 248 VHGYVVKSGIHVNSFLA--TSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
+ ++K ++ + L+++Y + G + DA K+ M +E+
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEV 376
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 238/447 (53%), Gaps = 7/447 (1%)
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
L+ + + S +G +HGYVVKSG+ + +A +L+N Y K D+R+ F++
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFED----S 76
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM 351
+ +W+++I ++Q P +LE + P+ +G
Sbjct: 77 PQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGR 136
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG 411
+H L +K G + V ++L+DMYAKC + AR +F+ Q++VV+W+ + G AQ G
Sbjct: 137 SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYV 471
EAL +F+ E+ + D + V+S CA+ L LG IH ++K S S +V
Sbjct: 197 ENEEALWLFKEALFENLAVND-YSFSSVISVCANSTLLELGRQIHGLSIKSSFDS-SSFV 254
Query: 472 GTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEEC 531
G++L++ Y+KCG + A VF+ + KN W+AM+ Y I LF+ M
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314
Query: 532 EPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEAL 591
+PN + F +VL ACSH+G+V EG F M +E P+ KHYA +VD+L RAG L+EAL
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEAL 373
Query: 592 DFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDG 651
+ I MP+ P SV+GA L C +H EL A ++ EL P + ++ +SN YA+DG
Sbjct: 374 EVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADG 433
Query: 652 RWGMVKQVREMIKQRGLNKVPGCSLVE 678
R+ + R++++ RG K G S VE
Sbjct: 434 RFEDAAKARKLLRDRGEKKETGLSWVE 460
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 187/379 (49%), Gaps = 8/379 (2%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERN 190
+L + + R ++ +LH +V+KSG S V N L++ YSK +R+ F++ +++
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 191 VVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHG 250
+W+S+ + QN+ L +M G + +D + S +C L G+ VH
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRG 310
+K+G + F+ +SL++MY KCG+I ARK+FDEM + ++V+W+ M+ GY+Q G
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEM----PQRNVVTWSGMMYGYAQMG 196
Query: 311 HPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRN 370
+AL LF + + + N +G +HGL +K ++ V +
Sbjct: 197 ENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGS 256
Query: 371 ALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSP 430
+L+ +Y+KC + A VF K++ WN+ + AQ + +E+F+RM+
Sbjct: 257 SLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK- 315
Query: 431 PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
P+ +T + VL+AC+ G + G + +K+ + + +L++ + G + A
Sbjct: 316 PNFITFLNVLNACSHAGLVDEG-RYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALE 374
Query: 491 VFDGMG-EKNAVTWSAMIS 508
V M + W A+++
Sbjct: 375 VITNMPIDPTESVWGALLT 393
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 14/265 (5%)
Query: 32 PPTLYLSPICKNIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPS 87
P I D + H + G+ D + L+ +YA G + +AR++FD +P
Sbjct: 120 PSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQ 179
Query: 88 PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVV----FSIVLKACSELRDVV 143
N+ ++ M+ Y + + L + F +L V FS V+ C+ +
Sbjct: 180 RNVVTWSGMMYGYAQMGENEEA-----LWLFKEALFENLAVNDYSFSSVISVCANSTLLE 234
Query: 144 QAARLH-CHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYV 202
++H + S S FV + LV YSKCG A +VF+E+ +N+ W +M AY
Sbjct: 235 LGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYA 294
Query: 203 QNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF 262
Q+ + + LF RM+ + N T +++ AC+ G + +G++ + +S I
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDK 354
Query: 263 LATSLLNMYVKCGDIGDARKVFDEM 287
SL++M + G + +A +V M
Sbjct: 355 HYASLVDMLGRAGRLQEALEVITNM 379
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 239/462 (51%), Gaps = 39/462 (8%)
Query: 245 GKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
GK +H +K G+ + + +SL++MY KCG + ARKVFDEM E ++ +W AMI
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM----PERNVATWNAMIG 120
Query: 305 GYSQRGHPLKALELFTD----RN---WAGILPNXXXXXXXXXXXXXXXXXXMGM------ 351
GY G + A LF + RN W ++ +
Sbjct: 121 GYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAW 180
Query: 352 -LLHGLVVKC-------GLFDNTPVRNA-----LIDMYAKCHLVSDARYVFETTVQKDVV 398
++ G+ V F++ P +NA ++ Y + V +AR +F +D+V
Sbjct: 181 SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
Query: 399 SWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAF 458
WN+ I+G AQ+G + +A++ F M+ E + P DAVTV +LSACA G L +G +H+
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEP-DAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 459 ALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVG 518
G + + +V AL++ YAKCGD ++A VF+ + ++ ++MIS + G G
Sbjct: 300 INHRG-IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKE 358
Query: 519 SIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMV 578
++ +F M + +P+E+ F +VL AC H G + EG ++F M + + P++KH+ C++
Sbjct: 359 ALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLI 417
Query: 579 DLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQAC 638
LL R+G LKEA + +M V+P +V GA L C +H + E+ E + +++E
Sbjct: 418 HLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSITN 476
Query: 639 YY-----VLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCS 675
Y +SNLYA RW + +R +++RGL K PG S
Sbjct: 477 SYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 176/389 (45%), Gaps = 40/389 (10%)
Query: 131 IVLKACS-ELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVFDEIAE 188
++L+AC+ + VV LH IK G SD V + L+ Y KCG V SARKVFDE+ E
Sbjct: 50 LILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE 109
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG--- 245
RNV +W +M Y+ N AV LF + V N T ++ K + +
Sbjct: 110 RNVATWNAMIGGYMSNGDAVLASGLFEEIS---VCRNTVTWIEMIKGYGKRIEIEKAREL 166
Query: 246 --------KWVHGYVVKSGIHV------------------NSFLATSLLNMYVKCGDIGD 279
K V + V G++V N+F+ + +++ Y + GD+ +
Sbjct: 167 FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHE 226
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXX 339
AR +F + DLV W +I GY+Q G+ A++ F + G P+
Sbjct: 227 ARAIFYRVFAR----DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS 399
+G +H L+ G+ N V NALIDMYAKC + +A VFE+ + V
Sbjct: 283 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVAC 342
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA 459
NS IS A G EALEMF M S PD +T + VL+AC G L G I +
Sbjct: 343 CNSMISCLAIHGKGKEALEMFSTMESLDLK-PDEITFIAVLTACVHGGFLMEGLKIFS-E 400
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSA 488
+K V ++ L++ + G K A
Sbjct: 401 MKTQDVKPNVKHFGCLIHLLGRSGKLKEA 429
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 161/383 (42%), Gaps = 56/383 (14%)
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
+I + RG P++AL L+ G+ +G LLH +K G
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFG 76
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
+ + V ++LI MY KC V AR VF+ +++V +WN+ I G +G A A +F+
Sbjct: 77 VCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFE 136
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA---FALKDGLVSCSIYVGTALLNF 478
E + VT + ++ + + F LK+ + + +L
Sbjct: 137 ----EISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKN------VKAWSVMLGV 186
Query: 479 YAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALF-----RD-------- 525
Y + AR F+ + EKNA WS M+SGY GD + A+F RD
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 526 ------------------MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR---E 564
M E EP+ V +S+L+AC+ SG + G + ++ E
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE 306
Query: 565 LN-FVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFE--L 621
LN FV + ++D+ A+ G+L+ A + + V+ V+ + + +H + + L
Sbjct: 307 LNQFVSN-----ALIDMYAKCGDLENATSVFESISVRS-VACCNSMISCLAIHGKGKEAL 360
Query: 622 GEVAIRRMLELHPDQACYYVLVS 644
+ L+L PD+ + +++
Sbjct: 361 EMFSTMESLDLKPDEITFIAVLT 383
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 24/241 (9%)
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL-GALPLGSSIHAFA 459
++ I GS +AL ++ +R P V ++ L ACA + + LG +H+ +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLI--LRACACVVPRVVLGKLLHSES 72
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGS 519
+K G+ S + VG++L++ Y KCG SAR VFD M E+N TW+AMI GY GD V +
Sbjct: 73 IKFGVCS-DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLA 131
Query: 520 IALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
LF ++ C N V + ++ + + LF M EL V K ++ M+
Sbjct: 132 SGLFEEI--SVCR-NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNV---KAWSVMLG 185
Query: 580 LLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACY 639
+ +++A F + +P + A++ + F +G+V H +A +
Sbjct: 186 VYVNNRKMEDARKFFEDIPEK------NAFVWSLMMSGYFRIGDV--------HEARAIF 231
Query: 640 Y 640
Y
Sbjct: 232 Y 232
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 190/343 (55%), Gaps = 14/343 (4%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G +H +VK G + V N LI +Y C + AR VF+ ++ +VSWNS I +
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK--DGLVSC 467
G AL++F+ M+ SF P D T+ VLSACA LG+L LG+ HAF L+ D V+
Sbjct: 230 FGEYDSALQLFREMQ-RSFEP-DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML 527
+ V +L+ Y KCG + A VF GM +++ +W+AMI G+ G ++ F M+
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 528 --KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAG 585
+E PN V F +L AC+H G V +G + F MM R+ P+++HY C+VDL+ARAG
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 586 NLKEALDFIDKMPVQPGVSVFGAYLHGCGLH-SEFELGEVAIRRMLELHPDQACY----- 639
+ EA+D + MP++P ++ + L C + EL E R ++ D
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCS 467
Query: 640 --YVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
YVL+S +YAS RW V VR+++ + G+ K PGCS +EI+
Sbjct: 468 GAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEIN 510
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 197/423 (46%), Gaps = 51/423 (12%)
Query: 31 HPPTLYLSPICKNIDTVKKFHASLIVHGFPGDT-------KLLSLYASFGFLRHARRLFD 83
H L+ C ++ +K+ HA + +P + K+L L +SF + +A R+FD
Sbjct: 48 HQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 84 HLPSPNLHSFKAMLRWYFLN-NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDV 142
+ + + + ++R + + + Y D F VLKAC+ +
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 143 VQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAY 201
+ ++HC ++K G D +V NGL+ Y CG + ARKVFDE+ ER++VSW SM A
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 202 VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS---GIH 258
V+ L+LF M+ F + + +T+ S+++AC LGSL G W H ++++ +
Sbjct: 228 VRFGEYDSALQLFREMQRSF-EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
++ + SL+ MY KCG + A +VF M + DL SW AMI+G++ G +A+
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGM----QKRDLASWNAMILGFATHGRAEEAMNF 342
Query: 319 FTDR---NWAGILPNXXXXXXXXXXXXXXXXXXMGMLL----HGLVVKCGLFDNTPVRN- 370
F DR + PN +G+L+ G V K + + VR+
Sbjct: 343 F-DRMVDKRENVRPN--------------SVTFVGLLIACNHRGFVNKGRQYFDMMVRDY 387
Query: 371 ----------ALIDMYAKCHLVSDA-RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
++D+ A+ +++A V ++ D V W S + C + G++ E E
Sbjct: 388 CIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEE 447
Query: 420 FQR 422
R
Sbjct: 448 IAR 450
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 383 SDARY---VFETTVQKDVVSWNSFISGCAQSGS-AYEALEMFQRMRSESFSPPDAVTVVG 438
SD Y VF++ WN+ I CA S EA ++++M S PD T
Sbjct: 97 SDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPF 156
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK 498
VL ACA + G +H +K G +YV L++ Y CG AR VFD M E+
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGF-GGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 499 NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF 558
+ V+W++MI G+ ++ LFR+M + EP+ SVL+AC+ G + G+
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 559 HMMCRELNFVPSMKHYA--CMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH 616
+ R+ + +M ++++ + G+L+ A M + ++ + A + G H
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATH 333
Query: 617 SEFELGEVAIRRMLE 631
E RM++
Sbjct: 334 GRAEEAMNFFDRMVD 348
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 208/429 (48%), Gaps = 53/429 (12%)
Query: 257 IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKAL 316
+ N L TS++N Y+ D+ AR+ FD E D+V W MI GY + G+ L+A
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFD----LSPERDIVLWNTMISGYIEMGNMLEAR 110
Query: 317 ELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR-----NA 371
LFD P R N
Sbjct: 111 --------------------------------------------SLFDQMPCRDVMSWNT 126
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
+++ YA + VF+ +++V SWN I G AQ+G E L F+RM E P
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 432 DAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
+ T+ VLSACA LGA G +H + G + V AL++ Y KCG + A V
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
Query: 492 FDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMV 551
F G+ ++ ++W+ MI+G G G ++ LF +M P++V F VL AC H G+V
Sbjct: 247 FKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLV 306
Query: 552 GEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLH 611
+G F+ M + + +P ++H C+VDLL+RAG L +A++FI+KMPV+ ++ L
Sbjct: 307 EDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
Query: 612 GCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKV 671
++ + ++GEVA+ +++L P +V++SN+Y GR+ +++ ++ G K
Sbjct: 367 ASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE 426
Query: 672 PGCSLVEID 680
G S +E D
Sbjct: 427 AGVSWIETD 435
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 166/350 (47%), Gaps = 28/350 (8%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH 124
L + G + A ++F + N+ + +M+ Y LN D+VS + L
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLN---KDLVSARRY--FDLSPER 88
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSARKVF 183
D+V+++ ++ E+ ++++A L + P D N +++ Y+ G + + +VF
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQM----PCRDVMSWNTVLEGYANIGDMEACERVF 144
Query: 184 DEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSL 242
D++ ERNV SW + Y QN E L F RM EG V ND T+ +++AC KLG+
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 243 HQGKWVHGYVVKSGIH-VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
GKWVH Y G + V+ + +L++MY KCG I A +VF + DL+SW
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI----KRRDLISWNT 260
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
MI G + GH +AL LF + +GI P+ MG++ GL
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSGISPD-----KVTFVGVLCACKHMGLVEDGLAYFNS 315
Query: 362 LFDNTPVR------NALIDMYAKCHLVSDA-RYVFETTVQKDVVSWNSFI 404
+F + + ++D+ ++ ++ A ++ + V+ D V W + +
Sbjct: 316 MFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 255/557 (45%), Gaps = 54/557 (9%)
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAE 188
F ++ AC +D +H +++ G V LV S + +F E
Sbjct: 32 FISLIHAC---KDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEE 88
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWV 248
RN ++ +N +R F M V + T ++ + +KLG G+ +
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 249 HGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQ 308
H +K+ + +SF+ SL++MY K G + A +VF+E + ++ W +I GY +
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 309 RGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPV 368
K + + T LF + P
Sbjct: 209 ----AKDMHMATT----------------------------------------LFRSMPE 224
Query: 369 RNA-----LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
RN+ LI Y ++ A+ +FE +K+VVSW + I+G +Q+G A+ + M
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
+ P + T+ VLSAC+ GAL G IH + L +G + +GTAL++ YAKCG
Sbjct: 285 LEKGLKP-NEYTIAAVLSACSKSGALGSGIRIHGYILDNG-IKLDRAIGTALVDMYAKCG 342
Query: 484 DAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLA 543
+ A VF M K+ ++W+AMI G+ + G +I FR M+ +P+EVVF +VL
Sbjct: 343 ELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLT 402
Query: 544 ACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV 603
AC +S V G F M + P++KHY +VDLL RAG L EA + ++ MP+ P +
Sbjct: 403 ACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDL 462
Query: 604 SVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMI 663
+ + A C H + E + +LEL P+ Y+ + +AS G V++ R +
Sbjct: 463 TTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSL 522
Query: 664 KQRGLNKVPGCSLVEID 680
++R + G S +E+D
Sbjct: 523 QKRIKERSLGWSYIELD 539
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 199/472 (42%), Gaps = 48/472 (10%)
Query: 41 CKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLR---HARRLFDHLPSPNLHSFKAML 97
CK+ +++ HA ++ G L + L+ ++ +F + N A++
Sbjct: 39 CKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALI 98
Query: 98 RWYFLN-NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG 156
R N S V F + R LG D + F VLK+ S+L LH +K+
Sbjct: 99 RGLTENARFESSVRHFILMLR--LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNF 156
Query: 157 PS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFN 215
D FV LVD Y+K G + A +VF+E +R E + ++N
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDR----------------IKKESILIWN 200
Query: 216 RMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG 275
+ G+ D + + T + + G W ++L+ YV G
Sbjct: 201 VLINGYCRAKDMHMAT--TLFRSMPERNSGSW-----------------STLIKGYVDSG 241
Query: 276 DIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXX 335
++ A+++F+ M E ++VSWT +I G+SQ G A+ + + G+ PN
Sbjct: 242 ELNRAKQLFELM----PEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297
Query: 336 XXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK 395
G+ +HG ++ G+ + + AL+DMYAKC + A VF K
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 396 DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
D++SW + I G A G ++A++ F++M S PD V + VL+AC + + LG +
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMY-SGEKPDEVVFLAVLTACLNSSEVDLGLNF 416
Query: 456 HAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAM 506
D + ++ +++ + G A + + M + TW+A+
Sbjct: 417 FDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/479 (30%), Positives = 234/479 (48%), Gaps = 38/479 (7%)
Query: 237 TKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDL 296
T+ ++ + K +H ++K+G+ ++ A+ +L C D + + T + +
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAY-LVFTRINHKNP 89
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDR--NWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
W +I G+S+ P A+ +F D + + P G LH
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 355 GLVVKCGLFDNTPVRNALIDMY-------------------------------AKCHLVS 383
G+V+K GL D++ +RN ++ MY AKC L+
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 384 DARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSAC 443
A+ +F+ Q++ VSWNS ISG ++G +AL+MF+ M+ + P D T+V +L+AC
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP-DGFTMVSLLNAC 268
Query: 444 ASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTW 503
A LGA G IH + +++ SI V TAL++ Y KCG + VF+ +K W
Sbjct: 269 AYLGASEQGRWIHEYIVRNRFELNSIVV-TALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327
Query: 504 SAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
++MI G G ++ LF ++ + EP+ V F VL AC+HSG V F +M
Sbjct: 328 NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKE 387
Query: 564 ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
+ PS+KHY MV++L AG L+EA I MPV+ ++ + L C E+ +
Sbjct: 388 KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAK 447
Query: 624 VAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLN 682
A + + +L PD+ C YVL+SN YAS G + + R ++K+R + K GCS +E+D
Sbjct: 448 RAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 209/480 (43%), Gaps = 60/480 (12%)
Query: 20 SLSSYIAFTLPHPPT-------LYLSPI---CKNIDTVKKFHASLIVHGFPGDTKLLSLY 69
++ S+ T+P P+ YL I C + +K+ HASLI G DT S
Sbjct: 4 TILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRV 63
Query: 70 ASF-----GFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS-FYHLTRYTLGFF 123
+F + +A +F + N + ++R + ++ +S F + +
Sbjct: 64 LAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVK 123
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSD------------------------ 159
+ + V KA L +LH VIK G D
Sbjct: 124 PQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRI 183
Query: 160 -----GF---VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
GF N ++ ++KCG + A+ +FDE+ +RN VSW SM +V+N + L
Sbjct: 184 FLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDAL 243
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
+F M+E V + FT+ SL+ AC LG+ QG+W+H Y+V++ +NS + T+L++MY
Sbjct: 244 DMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMY 303
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
KCG I + VF+ + L W +MI+G + G +A++LF++ +G+ P+
Sbjct: 304 CKCGCIEEGLNVFE----CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNAL-IDMYAKCHLVSDARYVFE 390
L+ + + + + L +++ L+ +A + +
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 391 TT-VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS--ESFSPPDAVTVVGVLSACASLG 447
V++D V W+S +S C + G+ +EM +R + P + V + +A AS G
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGN----VEMAKRAAKCLKKLDPDETCGYVLLSNAYASYG 475
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 187/311 (60%), Gaps = 8/311 (2%)
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQS---GSAYEALEMFQRMR 424
V+ AL+ YA C + +AR +FE + D+ +WN+ ++ A S S E L +F RM+
Sbjct: 152 VQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ 211
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
P+ +++V ++ +CA+LG G H + LK+ L + + +VGT+L++ Y+KCG
Sbjct: 212 VR----PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL-TLNQFVGTSLIDLYSKCGC 266
Query: 485 AKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAA 544
AR VFD M +++ ++AMI G + G G I L++ ++ + P+ F ++A
Sbjct: 267 LSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISA 326
Query: 545 CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
CSHSG+V EG ++F+ M P ++HY C+VDLL R+G L+EA + I KMPV+P +
Sbjct: 327 CSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
Query: 605 VFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIK 664
++ ++L H +FE GE+A++ +L L + + YVL+SN+YA RW V++ RE++K
Sbjct: 387 LWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMK 446
Query: 665 QRGLNKVPGCS 675
+NK PG S
Sbjct: 447 DHRVNKSPGIS 457
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 191/412 (46%), Gaps = 45/412 (10%)
Query: 35 LYLSPICKNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNL 90
L L CK++ +K+ HA +I G T KLL L +S L +A + +P+P++
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNPSV 71
Query: 91 HSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF-FHDLVV-------------FSIVLKAC 136
+ N L S +VS ++ T+ L F +D ++ + + KA
Sbjct: 72 ---------FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKAS 122
Query: 137 SELRDVVQAAR-LHCHVIK---SGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVV 192
+ R LH HV+K D FV LV Y+ CG + AR +F+ I E ++
Sbjct: 123 GFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLA 182
Query: 193 SWTSMFVAYVQN---DCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
+W ++ AY + D E L LF RM+ V N+ ++ +L+ +C LG +G W H
Sbjct: 183 TWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAH 239
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
YV+K+ + +N F+ TSL+++Y KCG + ARKVFDEM + D+ + AMI G +
Sbjct: 240 VYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM----SQRDVSCYNAMIRGLAVH 295
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM-LLHGLVVKCGLFDNTPV 368
G + +EL+ G++P+ G+ + + + G+
Sbjct: 296 GFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEH 355
Query: 369 RNALIDMYAKCHLVSDARY-VFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
L+D+ + + +A + + V+ + W SF+ G +Q+ +E E+
Sbjct: 356 YGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL-GSSQTHGDFERGEI 406
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 190/429 (44%), Gaps = 28/429 (6%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSGPSD-GFVLNGLVDAYSKCGHVC--SARKVFDEIAE 188
++ C L+++ Q +H +I G S + L+ L+ S VC A + +I
Sbjct: 15 LISKCKSLQNLKQ---IHAQIITIGLSHHTYPLSKLLHLSST---VCLSYALSILRQIPN 68
Query: 189 RNVVSWTSMFVAYVQNDCAVE---GLRLFNRM---REGFVDGNDFTVGSLVTACTKLGSL 242
+V + ++ + V N + + L++++ R FV N+FT SL A
Sbjct: 69 PSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQW 128
Query: 243 HQ-GKWVHGYVVK--SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
H+ G+ +H +V+K ++ + F+ +L+ Y CG + +AR +F+ + E DL +W
Sbjct: 129 HRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERI----REPDLATW 184
Query: 300 TAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
++ Y+ E+ + PN G+ H V+K
Sbjct: 185 NTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLK 244
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
L N V +LID+Y+KC +S AR VF+ Q+DV +N+ I G A G E +E+
Sbjct: 245 NNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIEL 304
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI-HAFALKDGLVSCSIYVGTALLNF 478
++ + S+ PD+ T V +SAC+ G + G I ++ G+ + G L++
Sbjct: 305 YKSLISQGLV-PDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYG-CLVDL 362
Query: 479 YAKCGDAKSARMVFDGMGEK-NAVTWSAMISGYGMQGD-GVGSIALFRDM-LKEECEPNE 535
+ G + A M K NA W + + GD G IAL + L+ E N
Sbjct: 363 LGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNY 422
Query: 536 VVFTSVLAA 544
V+ +++ A
Sbjct: 423 VLLSNIYAG 431
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 184/320 (57%), Gaps = 3/320 (0%)
Query: 365 NTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
+ PV NA+I Y + + A +F++ +K+V SW + ISG +Q+G+ EAL+MF M
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
+ P+ +TVV VL ACA+LG L +G + +A ++G +IYV A + Y+KCG
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD-NIYVCNATIEMYSKCGM 265
Query: 485 AKSARMVFDGMG-EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLA 543
A+ +F+ +G ++N +W++MI G ++ LF ML+E +P+ V F +L
Sbjct: 266 IDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLL 325
Query: 544 ACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV 603
AC H GMV +G LF M P ++HY CM+DLL R G L+EA D I MP++P
Sbjct: 326 ACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDA 385
Query: 604 SVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMI 663
V+G L C H E+ E+A + +L P V++SN+YA++ +W V ++R+++
Sbjct: 386 VVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLM 445
Query: 664 KQRGLNKVPGCS-LVEIDLN 682
K+ + K G S VE+ ++
Sbjct: 446 KKETMTKAAGYSYFVEVGVD 465
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 195/454 (42%), Gaps = 78/454 (17%)
Query: 44 IDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
++ +K+ HA + G LL L +AR+LFDH + + +++ Y+++
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFV 162
+ + + Y+L + G F+ + A + LH +SG SD F
Sbjct: 61 HQPHESIVLYNLLSFD-GLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAER-------------------------------NV 191
L+ AY+K G +C AR+VFDE+++R NV
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 192 VSWTSMFVAYVQNDCAVEGLRLFNRM-REGFVDGNDFTVGSLVTACTKLGSLHQGKWVHG 250
SWT++ + QN E L++F M ++ V N TV S++ AC LG L G+ + G
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRG 310
Y ++G N ++ + + MY KCG I A+++F+E+ ++ +L SW +MI + G
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL---GNQRNLCSWNSMIGSLATHG 296
Query: 311 HPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH----GLVVKCG-LFDN 365
+AL LF G P+ +G+LL G+VVK LF +
Sbjct: 297 KHDEALTLFAQMLREGEKPD--------------AVTFVGLLLACVHGGMVVKGQELFKS 342
Query: 366 TPVRNA----------LIDMYAKCHLVSDARYVFETTVQK-DVVSWNSFISGCAQSGS-- 412
+ +ID+ + + +A + +T K D V W + + C+ G+
Sbjct: 343 MEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVE 402
Query: 413 ----AYEALEMFQRMRSESFSPPDAVTVVGVLSA 442
A EAL + E +P + V + + +A
Sbjct: 403 IAEIASEAL-----FKLEPTNPGNCVIMSNIYAA 431
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQG 514
+H+ + G S S + T L+ YAK G AR VFD M +++ W+AMI+GY +G
Sbjct: 104 LHSQFFRSGFESDS-FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRG 162
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
D ++ LF M ++ N +T+V++ S +G E ++F M ++ + P+ +
Sbjct: 163 DMKAAMELFDSMPRK----NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN---H 215
Query: 575 ACMVDLLARAGNLKE 589
+V +L NL E
Sbjct: 216 ITVVSVLPACANLGE 230
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 179/627 (28%), Positives = 296/627 (47%), Gaps = 39/627 (6%)
Query: 77 HARRLFDHLPSPNL----HSFKAM-LRWYFLNNLHSDVVSFYHLTRYTLGFFHDLV---- 127
H RR+ + + S NL +F M +R NL S Y + + + ++V
Sbjct: 49 HNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGL 108
Query: 128 -----VFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARK 181
F VL CS+ + ++HC VI G + FV + LV Y+ V A K
Sbjct: 109 RESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALK 168
Query: 182 VFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFN---RMREGFVDGNDFTVGSLVTACTK 238
+FDE+ +RN+ + + Q E RLF RM V N T ++ C+
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTG---ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 239 LGSLHQGKWVHGYVVKSGIHV-NSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLV 297
+++GK +H VVKSG ++ N F+A L++ Y CGD+ + + F+ + E D++
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV----PEKDVI 281
Query: 298 SWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLV 357
SW +++ + G L +L+LF+ + G P+ G +H V
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 358 VKCGLFDNTP--VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
+K G FD + V++ALIDMY KC+ + ++ ++++ ++ NS ++ G +
Sbjct: 342 LKMG-FDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACA-----SLGALPLGSSIHAFALKDGLVSCSIY 470
+EMF M E + D VT+ VL A + SL + L +H A+K G + +
Sbjct: 401 IIEMFGLMIDEG-TGIDEVTLSTVLKALSLSLPESLHSCTL---VHCCAIKSGYAA-DVA 455
Query: 471 VGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE 530
V +L++ Y K G + +R VFD + N +++I+GY G G + + R+M +
Sbjct: 456 VSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMN 515
Query: 531 CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA 590
P+EV SVL+ CSHSG+V EG +F + + P K YACMVDLL RAG +++A
Sbjct: 516 LIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKA 575
Query: 591 LDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASD 650
+ + + + L C +H +G A ++ L P+ Y+ VS Y
Sbjct: 576 ERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEI 635
Query: 651 GRWGMVKQVREMIKQRGLNKVPGCSLV 677
G + + +Q+RE+ R L + G S V
Sbjct: 636 GDFEISRQIREIAASRELMREIGYSSV 662
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 186/398 (46%), Gaps = 7/398 (1%)
Query: 153 IKSGPSD-GFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGL 211
++ PSD + N +D K G++ SA + FDE++ R+VV++ + + C++ +
Sbjct: 38 LEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAI 97
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
L+ M + + T S+++ C+ +G VH V+ G N F+ ++L+ +Y
Sbjct: 98 ELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY 157
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
+ A K+FDEML + +L ++ + Q G + E++ G+ N
Sbjct: 158 ACLRLVDVALKLFDEML----DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG 213
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL-FDNTPVRNALIDMYAKCHLVSDARYVFE 390
G LH LVVK G N V N L+D Y+ C +S + F
Sbjct: 214 LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFN 273
Query: 391 TTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALP 450
+KDV+SWNS +S CA GS ++L++F +M+ P + L+ C+ +
Sbjct: 274 AVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG-KRPSIRPFMSFLNFCSRNSDIQ 332
Query: 451 LGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGY 510
G IH + LK G S++V +AL++ Y KC +++ +++ + N +++++
Sbjct: 333 SGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSL 392
Query: 511 GMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHS 548
G I +F M+ E +EV ++VL A S S
Sbjct: 393 MHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS 430
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 206/469 (43%), Gaps = 16/469 (3%)
Query: 49 KFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
+ H +I GF + + L+ LYA + A +LFD + NL +LR +
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 105 LHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG--PSDGFV 162
+ Y L G + + + +++ CS R V + +LH V+KSG S+ FV
Sbjct: 193 ESKRLFEVY-LRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV 251
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
N LVD YS CG + + + F+ + E++V+SW S+ ++ L LF++M+
Sbjct: 252 ANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGK 311
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF-LATSLLNMYVKCGDIGDAR 281
+ S + C++ + GK +H YV+K G V+S + ++L++MY KC I ++
Sbjct: 312 RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSA 371
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF--TDRNWAGILPNXXXXXXXXX 339
++ + L+L +++ G +E+F GI
Sbjct: 372 LLYQSLPC----LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKAL 427
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS 399
L+H +K G + V +LID Y K +R VF+ ++
Sbjct: 428 SLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFC 487
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA 459
S I+G A++G + ++M + M + PD VT++ VLS C+ G + G I
Sbjct: 488 LTSIINGYARNGMGTDCVKMLREMDRMNL-IPDEVTILSVLSGCSHSGLVEEGELIFDSL 546
Query: 460 LKDGLVSCSIYVGTALLNFYAKCG-DAKSARMVFDGMGEKNAVTWSAMI 507
+S + +++ + G K+ R++ G+ + V WS+++
Sbjct: 547 ESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLL 595
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 243/538 (45%), Gaps = 89/538 (16%)
Query: 77 HARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKAC 136
+ R +FD + PN+ +M +++ ++ +DV+ Y R G D F +V+K+
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYE-QRSRCGIMPDAFSFPVVIKSA 116
Query: 137 SELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTS 196
+ QA K D +V N ++D Y K V SARKVFD+I++R W
Sbjct: 117 GRFGILFQALVEKLGFFK----DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 197 MFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSG 256
M Y + E +LF+ M E ND W
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPE-----NDVV-----------------SW--------- 201
Query: 257 IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKAL 316
T ++ + K D+ +ARK FD M E +VSW AM+ GY+Q G AL
Sbjct: 202 --------TVMITGFAKVKDLENARKYFDRM----PEKSVVSWNAMLSGYAQNGFTEDAL 249
Query: 317 ELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMY 376
LF D G+ PN + L L+ + + N V+ AL+DM+
Sbjct: 250 RLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMH 309
Query: 377 AKCHLV--------------------------------SDARYVFETTVQKDVVSWNSFI 404
AKC + S AR +F+T +++VVSWNS I
Sbjct: 310 AKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLI 369
Query: 405 SGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL 464
+G A +G A A+E F+ M S PD VT++ VLSAC + L LG I + K+ +
Sbjct: 370 AGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQI 429
Query: 465 -VSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALF 523
++ S Y +L+ YA+ G+ A+ VFD M E++ V+++ + + + GDGV ++ L
Sbjct: 430 KLNDSGY--RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 524 RDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLL 581
M E EP+ V +TSVL AC+ +G++ EG R+F + P HYACM DLL
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 187/464 (40%), Gaps = 114/464 (24%)
Query: 300 TAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
+M +S+ L L+ R+ GI+P+ G+L LV K
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR-----FGILFQALVEK 129
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK------------------------ 395
G F + VRN ++DMY K V AR VF+ Q+
Sbjct: 130 LGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKL 189
Query: 396 -------DVVSW-------------------------------NSFISGCAQSGSAYEAL 417
DVVSW N+ +SG AQ+G +AL
Sbjct: 190 FDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDAL 249
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
+F M P + V+ V+SAC+ L S+ + + V + +V TALL+
Sbjct: 250 RLFNDMLRLGVRPNETTWVI-VISACSFRADPSLTRSLVKL-IDEKRVRLNCFVKTALLD 307
Query: 478 FYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE------- 529
+AKC D +SAR +F+ +G ++N VTW+AMISGY GD + LF M K
Sbjct: 308 MHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNS 367
Query: 530 -------------------------ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRE 564
+ +P+EV SVL+AC H + G + + R+
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI-RK 426
Query: 565 LNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS---VFGAY-LHGCGLHSEFE 620
+ Y ++ + AR GNL EA D+M + VS +F A+ +G G+ +
Sbjct: 427 NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVET--- 483
Query: 621 LGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIK 664
L ++ + + PD+ Y +++ + R G++K+ + + K
Sbjct: 484 LNLLSKMKDEGIEPDRVTY----TSVLTACNRAGLLKEGQRIFK 523
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 143/302 (47%), Gaps = 39/302 (12%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGF 122
T +++ +A L +AR+ FD +P ++ S+ AML Y N D + ++ LG
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN-DMLRLGV 260
Query: 123 FHDLVVFSIVLKACS------ELRDVVQ-----AARLHCHV-------------IKS--- 155
+ + IV+ ACS R +V+ RL+C V I+S
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 156 -----GPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVE 209
G V N ++ Y++ G + SAR++FD + +RNVVSW S+ Y N A
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 210 GLRLFNRMRE-GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLL 268
+ F M + G ++ T+ S+++AC + L G + Y+ K+ I +N SL+
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLI 440
Query: 269 NMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL 328
MY + G++ +A++VFDEM E D+VS+ + ++ G ++ L L + GI
Sbjct: 441 FMYARGGNLWEAKRVFDEM----KERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 329 PN 330
P+
Sbjct: 497 PD 498
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 6/210 (2%)
Query: 41 CKNIDTVKKFHASL-IVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRW 99
C++I + ++ L ++S Y G + AR+LFD +P N+ S+ +++
Sbjct: 312 CRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAG 371
Query: 100 YFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG--- 156
Y N + + F+ D V VL AC + D+ + ++ K+
Sbjct: 372 YAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKL 431
Query: 157 PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNR 216
G+ L+ Y++ G++ A++VFDE+ ER+VVS+ ++F A+ N VE L L ++
Sbjct: 432 NDSGY--RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSK 489
Query: 217 MREGFVDGNDFTVGSLVTACTKLGSLHQGK 246
M++ ++ + T S++TAC + G L +G+
Sbjct: 490 MKDEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 204/413 (49%), Gaps = 34/413 (8%)
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILP-NXXXXXXXXXXXXXXXXXXMGMLLH 354
L+S T + Y+ +G+ +AL LF + + LP + +G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAY 414
VK N V AL+DMY KC VS AR +F+ Q++ V WN+ IS G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 415 EALEMFQRM----RSESFS----------------------------PPDAVTVVGVLSA 442
EA+E+++ M SF+ P+ +T++ ++SA
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 443 CASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVT 502
C+++GA L IH++A ++ L+ + + L+ Y +CG ++VFD M +++ V
Sbjct: 192 CSAIGAFRLIKEIHSYAFRN-LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 503 WSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMC 562
WS++IS Y + GD ++ F++M + P+++ F +VL ACSH+G+ E F M
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 563 RELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELG 622
+ S HY+C+VD+L+R G +EA I MP +P +GA L C + E EL
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Query: 623 EVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCS 675
E+A R +L + P+ YVL+ +Y S GR +++R +K+ G+ PG S
Sbjct: 371 EIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 38/276 (13%)
Query: 89 NLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARL 148
L S L Y H ++ + + D VFS+ LK+C+ V +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 149 HCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCA 207
H H +KS S+ FV L+D Y KC V ARK+FDEI +RN V W +M Y
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 208 VEGLRL------------FNRMREGFVDGND---------------------FTVGSLVT 234
E + L FN + +G V D T+ +LV+
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
AC+ +G+ K +H Y ++ I + L + L+ Y +CG I + VFD M ++
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM----EDR 246
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
D+V+W+++I Y+ G AL+ F + A + P+
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPD 282
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 46/263 (17%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHL--------- 115
LL +Y + HAR+LFD +P N + AM+ Y + V Y
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 116 --------------TRYTLGFFHDLVVFSI---------VLKACSELRDVVQAARLHCH- 151
+ + F+ ++ F ++ ACS + +H +
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 152 ---VIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAV 208
+I+ P + +GLV+AY +CG + + VFD + +R+VV+W+S+ AY + A
Sbjct: 209 FRNLIEPHPQ---LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 209 EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG----KWVHGYVVKSGIHVNSFLA 264
L+ F M V +D +++ AC+ G + K + G G+ +
Sbjct: 266 SALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG---DYGLRASKDHY 322
Query: 265 TSLLNMYVKCGDIGDARKVFDEM 287
+ L+++ + G +A KV M
Sbjct: 323 SCLVDVLSRVGRFEEAYKVIQAM 345
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 176/326 (53%), Gaps = 12/326 (3%)
Query: 362 LFDNTPVR-----NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA 416
LFD P R N LID K + AR +F++ +D+VSWNS ISG AQ EA
Sbjct: 174 LFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREA 233
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
+++F M + P D V +V LSACA G G +IH + + L S ++ T L+
Sbjct: 234 IKLFDEMVALGLKP-DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS-FLATGLV 291
Query: 477 NFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
+FYAKCG +A +F+ +K TW+AMI+G M G+G ++ FR M+ +P+ V
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
F SVL CSHSG+V E LF M + MKHY CM DLL RAG ++EA + I++
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQ 411
Query: 597 MPVQPG----VSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGR 652
MP G + + L GC +H E+ E A R+ L P+ Y ++ +YA+ R
Sbjct: 412 MPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAER 471
Query: 653 WGMVKQVREMI-KQRGLNKVPGCSLV 677
W V +VRE+I + + + K G S V
Sbjct: 472 WEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 195/463 (42%), Gaps = 82/463 (17%)
Query: 36 YLSPICKNIDTVKKFHASLIVHG-FPGDTKLLSLYASFGF---------------LRHAR 79
YL +C+ + + +FHA I G D K S++A+ F + +A
Sbjct: 9 YLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYAT 68
Query: 80 RLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSEL 139
+F + +P+ F ++R L+ S + + D F V KAC+
Sbjct: 69 SVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAK 128
Query: 140 R--DVVQAARLHCHVIKSGP-SDGFVLNGLVDAYS------------------------- 171
+ D+ LHC ++ G SD F LN L+ YS
Sbjct: 129 KNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNV 188
Query: 172 ------KCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGN 225
K + AR++FD + R++VSW S+ Y Q + E ++LF+ M + +
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 226 DFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFD 285
+ + S ++AC + G +GK +H Y + + ++SFLAT L++ Y KCG I A ++F+
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 286 EMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXX 345
L SD L +W AMI G + G+ ++ F +GI P+
Sbjct: 309 --LCSDKT--LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPD----------GVTFI 354
Query: 346 XXXMGMLLHGLVVKC-GLFD--------NTPVRN--ALIDMYAKCHLVSDARYVFETTVQ 394
+G GLV + LFD N +++ + D+ + L+ +A + E +
Sbjct: 355 SVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPK 414
Query: 395 -----KDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPD 432
+ +++W+ + GC G+ A + R++ + SP D
Sbjct: 415 DGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVK--ALSPED 455
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 132/325 (40%), Gaps = 44/325 (13%)
Query: 377 AKCHLVSDARYVFETTVQKDVVSWNSFISGCA-QSGSAYEALEMFQRMRSESFSPPDAVT 435
A +VS A VF +N+ I C S+ + F MR S PPD T
Sbjct: 59 ASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSV-PPDFHT 117
Query: 436 VVGVLSACASL--GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD 493
V ACA+ G L L ++H AL+ GL+S ++ L+ Y+ SA +FD
Sbjct: 118 FPFVFKACAAKKNGDLTLVKTLHCQALRFGLLS-DLFTLNTLIRVYSLIAPIDSALQLFD 176
Query: 494 GMGEKNAVTWS-------------------------------AMISGYGMQGDGVGSIAL 522
+++ VT++ ++ISGY +I L
Sbjct: 177 ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKL 236
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLA 582
F +M+ +P+ V S L+AC+ SG +G + R+ F+ S +VD A
Sbjct: 237 FDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG-LVDFYA 295
Query: 583 RAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYY 640
+ G + A++ I ++ + + A + G +H EL R+M+ + PD +
Sbjct: 296 KCGFIDTAME-IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFI 354
Query: 641 VLVSNLYASDGRWGMVKQVREMIKQ 665
++ S G+V + R + Q
Sbjct: 355 SVLVGCSHS----GLVDEARNLFDQ 375
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 256/542 (47%), Gaps = 59/542 (10%)
Query: 147 RLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
+LH +V K G S+ + N L+ Y + A KVFDE+ + +V+SW S+ YVQ+
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 206 CAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHV-NSFLA 264
EG+ LF + V N+F+ + + AC +L G +H +VK G+ N +
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
L++MY KCG + DA VF M +E D VSW A++ S+ G L F
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHM----EEKDTVSWNAIVASCSRNGKLELGLWFFHQ--- 248
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
+PN +T N LID + K ++
Sbjct: 249 ---MPN---------------------------------PDTVTYNELIDAFVKSGDFNN 272
Query: 385 ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
A V + SWN+ ++G S + EA E F +M S D ++ VL+A A
Sbjct: 273 AFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRF-DEYSLSIVLAAVA 331
Query: 445 SLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWS 504
+L +P GS IHA A K GL S + V +AL++ Y+KCG K A ++F M KN + W+
Sbjct: 332 ALAVVPWGSLIHACAHKLGLDS-RVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWN 390
Query: 505 AMISGYGMQGDGVGSIALFRDMLKEE-CEPNEVVFTSVLAACSH-----SGMVGEGSRLF 558
MISGY GD + +I LF + +E +P+ F ++LA CSH M+G F
Sbjct: 391 EMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLG----YF 446
Query: 559 HMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSE 618
MM E PS++H ++ + + G + +A I + + A L C +
Sbjct: 447 EMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKD 506
Query: 619 FELGEVAIRRMLEL-HPDQACY-YVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSL 676
+ + +M+EL D+ Y Y+++SNLYA RW V Q+R+++++ G+ K G S
Sbjct: 507 LKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSW 566
Query: 677 VE 678
++
Sbjct: 567 ID 568
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 214/495 (43%), Gaps = 57/495 (11%)
Query: 33 PTLYLSPICKN---IDTVKKFHASLIVHGFPGDTKL----LSLYASFGFLRHARRLFDHL 85
P ++L + N + ++ H + HGF +T+L + Y + L A ++FD +
Sbjct: 57 PLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEM 116
Query: 86 PSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQA 145
P P++ S+ +++ Y + + + + L + F + F+ L AC+ L
Sbjct: 117 PDPDVISWNSLVSGYVQSGRFQEGICLF-LELHRSDVFPNEFSFTAALAACARLHLSPLG 175
Query: 146 ARLHCHVIKSGPSDGFVL--NGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQ 203
A +H ++K G G V+ N L+D Y KCG + A VF + E++ VSW +
Sbjct: 176 ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNA------- 228
Query: 204 NDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFL 263
+V +C++ G L G W + ++
Sbjct: 229 ----------------------------IVASCSRNGKLELGLWFFHQMPNP----DTVT 256
Query: 264 ATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRN 323
L++ +VK GD +A +V +M + SW ++ GY +A E FT +
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPNPNSS----SWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 324 WAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVS 383
+G+ + G L+H K GL V +ALIDMY+KC ++
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 384 DARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSAC 443
A +F T +K+++ WN ISG A++G + EA+++F +++ E F PD T + +L+ C
Sbjct: 373 HAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Query: 444 ASLGALPLGSSIHAFAL--KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKNA 500
+ +P+ + F + + + S+ +L+ + G+ A+ V G +
Sbjct: 433 SHC-EVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG 491
Query: 501 VTWSAMISGYGMQGD 515
V W A++ + D
Sbjct: 492 VAWRALLGACSARKD 506
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 20/252 (7%)
Query: 399 SWNSFISGCAQSGSA---YEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
SW++ + A+ GS A+E+ PDA +V +L + G + L +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELIN-----DGEKPDASPLVHLLRVSGNYGYVSLCRQL 77
Query: 456 HAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGD 515
H + K G VS + + +L+ FY + A VFD M + + ++W++++SGY G
Sbjct: 78 HGYVTKHGFVS-NTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 516 GVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG----SRLFHMMCRELNFVPSM 571
I LF ++ + + PNE FT+ LAAC+ + G S+L + + N V
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG- 195
Query: 572 KHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE 631
C++D+ + G + +A+ M + VS + A + C + + ELG +M
Sbjct: 196 ---NCLIDMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCSRNGKLELGLWFFHQM-- 249
Query: 632 LHPDQACYYVLV 643
+PD Y L+
Sbjct: 250 PNPDTVTYNELI 261
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 171/331 (51%), Gaps = 2/331 (0%)
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G +H + G N ++ L+ +YA + A +F + +D++ WN+ ISG Q
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
G E L ++ MR P D T V AC++L L G HA +K + S +I
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVP-DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS-NI 244
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE 529
V +AL++ Y KC VFD + +N +TW+++ISGYG G + F M +E
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 530 ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKE 589
C PN V F VL AC+H G+V +G F+ M R+ P +HYA MVD L RAG L+E
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 590 ALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYAS 649
A +F+ K P + V+G+ L C +H +L E+A + LEL P YV+ +N YAS
Sbjct: 365 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYAS 424
Query: 650 DGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
G +VR ++ G+ K PG S +E+
Sbjct: 425 CGLREAASKVRRKMENAGVKKDPGYSQIELQ 455
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 17/266 (6%)
Query: 205 DCAVEGLRLFNRMREGF---------VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS 255
D ++GL + R++E V+ + V L+ C + +GK +H +
Sbjct: 80 DKTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAV--LLQECKQRKEYTKGKRIHAQMFVV 137
Query: 256 GIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKA 315
G +N +L LL +Y GD+ A +F + DL+ W AMI GY Q+G +
Sbjct: 138 GFALNEYLKVKLLILYALSGDLQTAGILFRSLKIR----DLIPWNAMISGYVQKGLEQEG 193
Query: 316 LELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDM 375
L ++ D I+P+ G H +++K + N V +AL+DM
Sbjct: 194 LFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDM 253
Query: 376 YAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVT 435
Y KC SD VF+ ++V++W S ISG G E L+ F++M+ E P+ VT
Sbjct: 254 YFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG-CRPNPVT 312
Query: 436 VVGVLSACASLGALPLGSSIHAFALK 461
+ VL+AC G + G H +++K
Sbjct: 313 FLVVLTACNHGGLVDKGWE-HFYSMK 337
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLN-----GLVDAYSKCGHVCSARKV 182
++++L+ C + ++ + R+H + G F LN L+ Y+ G + +A +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVG----FALNEYLKVKLLILYALSGDLQTAGIL 165
Query: 183 FDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSL 242
F + R+++ W +M YVQ EGL ++ MR+ + + +T S+ AC+ L L
Sbjct: 166 FRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRL 225
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
GK H ++K I N + ++L++MY KC D +VFD++ T ++++WT++
Sbjct: 226 EHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR----NVITWTSL 281
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPN 330
I GY G + L+ F G PN
Sbjct: 282 ISGYGYHGKVSEVLKCFEKMKEEGCRPN 309
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 113/240 (47%), Gaps = 9/240 (3%)
Query: 48 KKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN 103
K+ HA + V GF + KLL LYA G L+ A LF L +L + AM+ Y
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQK 187
Query: 104 NLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFV 162
L + + Y+ R D F+ V +ACS L + R H +IK S+ V
Sbjct: 188 GLEQEGLFIYYDMRQNR-IVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
+ LVD Y KC +VFD+++ RNV++WTS+ Y + E L+ F +M+E
Sbjct: 247 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC 306
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS--GIHVNSFLATSLLNMYVKCGDIGDA 280
N T ++TAC G + +G W H Y +K GI ++++ + G + +A
Sbjct: 307 RPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 236/511 (46%), Gaps = 12/511 (2%)
Query: 172 KCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGS 231
K G++ +A +FDE+ ER+VVSW +M V G+R+F M+ + +FT
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGI-HVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
L + T + G+ +HG + SG+ N + S+++MY + G A VF LT
Sbjct: 142 LASLVT---CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF---LTM 195
Query: 291 DDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG 350
+D D+VSW +I+ S G+ AL+ F I P+ G
Sbjct: 196 EDR-DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Query: 351 MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQS 410
L +K G N+ V A IDM++KC+ + D+ +F + D V NS I +
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 411 GSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIY 470
+AL +F ++S P D T VLS+ ++ L G+ +H+ +K G
Sbjct: 315 CCGEDALRLFILAMTQSVRP-DKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGF-DLDTA 371
Query: 471 VGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML-KE 529
V T+L+ Y K G A VF K+ + W+ +I G V S+A+F +L +
Sbjct: 372 VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ 431
Query: 530 ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKE 589
+P+ V +L AC ++G V EG ++F M + P +HYAC+++LL R G + E
Sbjct: 432 SLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINE 491
Query: 590 ALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYAS 649
A D DK+P +P ++ L + L E + MLE P + Y+++ +Y
Sbjct: 492 AKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEM 551
Query: 650 DGRWGMVKQVREMIKQRGLNKVPGCSLVEID 680
RW ++R + + L G S + I+
Sbjct: 552 TWRWENSVKLRYAMNEHKLKSAQGSSKISIE 582
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 142/542 (26%), Positives = 233/542 (42%), Gaps = 51/542 (9%)
Query: 32 PPTLYLSPIC------KNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRL 81
P +LY S + K+ K HA L+ GF T + L LY G + +A +L
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 82 FDHLPSPNLHSFKAMLRWYF----LNNL--------HSDVVSFYHLT---------RYTL 120
FD +P N ++ L+ F LNN DVVS+ + Y +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 121 GFFHDL---------VVFSIVLKACSELRDVVQAARLHCHVIKSGPS--DGFVLNGLVDA 169
F D+ FSI+ + +R ++H + I SG S + V N ++D
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVR---HGEQIHGNAICSGVSRYNLVVWNSVMDM 178
Query: 170 YSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTV 229
Y + G A VF + +R+VVSW + ++ + L F MRE + +++TV
Sbjct: 179 YRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTV 238
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
+V+ C+ L L +GK +K G NS + + ++M+ KC + D+ K+F E+
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL-- 296
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
++ D V +MI YS AL LF + P+
Sbjct: 297 --EKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDH- 353
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G +H LV+K G +T V +L++MY K V A VF T KD++ WN+ I G A+
Sbjct: 354 GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLAR 413
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
+ A E+L +F ++ PD VT++G+L AC G + G I + K V+
Sbjct: 414 NSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGN 473
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMG-EKNAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
++ + G A+ + D + E ++ W ++ GD + + + ML+
Sbjct: 474 EHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLE 533
Query: 529 EE 530
E
Sbjct: 534 SE 535
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 10/197 (5%)
Query: 452 GSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYG 511
GS I+A L D + + L K G +A +FD M E++ V+W+ MISG
Sbjct: 53 GSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLV 112
Query: 512 MQGDGVGSIALFRDMLKEECEPNEVVFT--SVLAACSHSGMVGEGSRLFHMMCRELNFVP 569
G I +F DM + E P E F+ + L C G G+ + + R N V
Sbjct: 113 SCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSR-YNLVV 171
Query: 570 SMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGL--HSEFELGEVAIR 627
+ ++D+ R G AL M + VS + + C + E L + +
Sbjct: 172 ----WNSVMDMYRRLGVFDYALSVFLTMEDRDVVS-WNCLILSCSDSGNKEVALDQFWLM 226
Query: 628 RMLELHPDQACYYVLVS 644
R +E+ PD+ ++VS
Sbjct: 227 REMEIQPDEYTVSMVVS 243
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 238/464 (51%), Gaps = 36/464 (7%)
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKC-----GDIGDARKVFDE 286
+ T K S Q K + + + +G +SFL + LL +C GD+ A ++F
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRY 62
Query: 287 M---LTSDDELDLVSWTAMIVGYSQRGHPLKALE-----LFTDRNWAGILPNXXXXXXXX 338
+ LT+D W A+I G++ HP A L + + I
Sbjct: 63 IPKPLTND-------WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFT 115
Query: 339 XXXXXXXXXXMGM-LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDV 397
M LH + + GL ++ + L+D Y+K + A +F+ +DV
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI-H 456
SWN+ I+G A EA+E+++RM +E + VTVV L AC+ LG + G +I H
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSE-VTVVAALGACSHLGDVKEGENIFH 234
Query: 457 AFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM-GEKNAVTWSAMISGYGMQGD 515
++ + +VS A ++ Y+KCG A VF+ G+K+ VTW+ MI+G+ + G+
Sbjct: 235 GYSNDNVIVS------NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE 288
Query: 516 GVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFH-MMCRELNFVPSMKHY 574
++ +F + +P++V + + L AC H+G+V G +F+ M C+ + +MKHY
Sbjct: 289 AHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVE--RNMKHY 346
Query: 575 ACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP 634
C+VDLL+RAG L+EA D I M + P ++ + L ++S+ E+ E+A R + E+
Sbjct: 347 GCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGV 406
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVE 678
+ +VL+SN+YA+ GRW V +VR+ ++ + + K+PG S +E
Sbjct: 407 NNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIE 450
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 167/363 (46%), Gaps = 17/363 (4%)
Query: 72 FGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFH-----DL 126
FG L A ++F ++P P + + A++R + ++ S S+Y D
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 127 VVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDE 185
+ S LKAC+ +LHC + + G S D + L+DAYSK G + SA K+FDE
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 186 IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG 245
+ R+V SW ++ V + A E + L+ RM + ++ TV + + AC+ LG + +G
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 246 KWV-HGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIV 304
+ + HGY + N ++ + ++MY KCG + A +VF++ +V+W MI
Sbjct: 230 ENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKK---SVVTWNTMIT 281
Query: 305 GYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFD 364
G++ G +ALE+F GI P+ G+ + + G+
Sbjct: 282 GFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVER 341
Query: 365 NTPVRNALIDMYAKCHLVSDARYVF-ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
N ++D+ ++ + +A + ++ D V W S + G ++ S E E+ R
Sbjct: 342 NMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL-GASEIYSDVEMAEIASRE 400
Query: 424 RSE 426
E
Sbjct: 401 IKE 403
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 190/344 (55%), Gaps = 15/344 (4%)
Query: 349 MGMLLHGLVVKCG-LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISG- 406
+G ++HG+V K G L+++ + L+ YAK + AR VF+ ++ V+WN+ I G
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 407 CAQSG----SAYEALEMFQRMRS-ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK 461
C+ +A +A+ +F+R S P T+V VLSA + G L +GS +H + K
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 462 DGLV-SCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSI 520
G +++GTAL++ Y+KCG +A VF+ M KN TW++M +G + G G +
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 521 ALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDL 580
L M + +PNE+ FTS+L+A H G+V EG LF M P ++HY C+VDL
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 581 LARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHPD----- 635
L +AG ++EA FI MP++P + + + C ++ E +GE + +LE+ +
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 636 -QACY-YVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
C YV +SN+ A G+W V+++R+ +K+R + PG S V
Sbjct: 429 GSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 156/342 (45%), Gaps = 32/342 (9%)
Query: 242 LHQGKWVHGYVVKSG-IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
L G+ VHG V K G ++ + + T+LL+ Y K GD+ ARKVFDEM E V+W
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEM----PERTSVTWN 182
Query: 301 AMIVGY---SQRG--HPLKALELFTDRN--WAGILPNXXXXXXXXXXXXXXXXXXMGMLL 353
AMI GY +G + KA+ LF + +G+ P +G L+
Sbjct: 183 AMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLV 242
Query: 354 HGLVVKCGLFDNTPV--RNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG 411
HG + K G V AL+DMY+KC +++A VFE K+V +W S +G A +G
Sbjct: 243 HGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNG 302
Query: 412 SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI-HAFALKDGLVSCSIY 470
E + RM +ES P+ +T +LSA +G + G + + + G+ +
Sbjct: 303 RGNETPNLLNRM-AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEH 361
Query: 471 VGTALLNFYAKCGDAKSARMVFDGMGEK-NAVTWSAM-----ISGYGMQGDGVGSIALFR 524
G +++ K G + A M K +A+ ++ I G + G+ +G L
Sbjct: 362 YG-CIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEI 420
Query: 525 DMLKE-----ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
+ E ECE + V ++VLA H G E +L M
Sbjct: 421 EREDEKLSGSECE-DYVALSNVLA---HKGKWVEVEKLRKEM 458
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 13/222 (5%)
Query: 434 VTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD 493
V V+G + AS AL +G +H K G + S +GT LL+FYAK GD + AR VFD
Sbjct: 112 VFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFD 171
Query: 494 GMGEKNAVTWSAMISGYGMQGD-----GVGSIALFRDM--LKEECEPNEVVFTSVLAACS 546
M E+ +VTW+AMI GY D ++ LFR P + VL+A S
Sbjct: 172 EMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAIS 231
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHY--ACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
+G++ GS L H +L F P + + +VD+ ++ G L A + M V+ V
Sbjct: 232 QTGLLEIGS-LVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVF 289
Query: 605 VFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVS 644
+ + G L+ + RM E + P++ + L+S
Sbjct: 290 TWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLS 331
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLN------NLHSDVVSFYHLT 116
T LL YA G LR+AR++FD +P ++ AM+ Y + N +V F +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS---DGFVLNGLVDAYSKC 173
G VL A S+ + + +H ++ K G + D F+ LVD YSKC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 174 GHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
G + +A VF+ + +NV +WTSM N E L NRM E + N+ T SL+
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 234 TACTKLGSLHQG 245
+A +G + +G
Sbjct: 331 SAYRHIGLVEEG 342
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 168/309 (54%), Gaps = 4/309 (1%)
Query: 370 NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS 429
N +I+ K A+ V ++V++WN I G ++ EAL+ + M S +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 430 PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSAR 489
P+ + L+ACA LG L +H+ + G + + + +AL++ YAKCGD ++R
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSG-IELNAILSSALVDVYAKCGDIGTSR 220
Query: 490 MVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSG 549
VF + + W+AMI+G+ G +I +F +M E P+ + F +L CSH G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAY 609
++ EG F +M R + P ++HY MVDLL RAG +KEA + I+ MP++P V ++ +
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 610 LHGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLN 669
L + ELGE+AI+ L ++ YVL+SN+Y+S +W ++VRE++ + G+
Sbjct: 341 LSSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 670 KVPGCSLVE 678
K G S +E
Sbjct: 398 KAKGKSWLE 406
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 163 LNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFV 222
+N ++++ K G A+KV +++NV++W M YV+N E L+ M F
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNML-SFT 159
Query: 223 D--GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDA 280
D N F+ S + AC +LG LH KWVH ++ SGI +N+ L+++L+++Y KCGDIG +
Sbjct: 160 DIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 281 RKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX 340
R+VF + +D + W AMI G++ G +A+ +F++ + P+
Sbjct: 220 REVFYSVKRNDVSI----WNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTT 275
Query: 341 XXXXXXXXMGMLLHGLVVKCGLFDNTPVRN---ALIDMYAKCHLVSDARYVFETT-VQKD 396
G GL+ + F P A++D+ + V +A + E+ ++ D
Sbjct: 276 CSHCGLLEEGKEYFGLMSR--RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPD 333
Query: 397 VVSWNSFIS 405
VV W S +S
Sbjct: 334 VVIWRSLLS 342
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 267 LLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS---QRGHPLKALE---LFT 320
++ +K G+ G A+KV L + + ++++W MI GY Q LKAL+ FT
Sbjct: 104 IIESLMKIGESGLAKKV----LRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFT 159
Query: 321 DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCH 380
D I PN +H L++ G+ N + +AL+D+YAKC
Sbjct: 160 D-----IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCG 214
Query: 381 LVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
+ +R VF + + DV WN+ I+G A G A EA+ +F M +E S PD++T +G+L
Sbjct: 215 DIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVS-PDSITFLGLL 273
Query: 441 SACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-EKN 499
+ C+ G L G + + + A+++ + G K A + + M E +
Sbjct: 274 TTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPD 333
Query: 500 AVTWSAMIS 508
V W +++S
Sbjct: 334 VVIWRSLLS 342
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 211/465 (45%), Gaps = 40/465 (8%)
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
VH ++ SG +S A LL + GD ++ + L + Y
Sbjct: 41 VHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIG------KLYCANPVFKAYL 94
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
P +AL + D G +P+ G + HG +K G P
Sbjct: 95 VSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLP 154
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSES 427
V+N+L+ MY C + A+ +F ++D+VSWNS I+G ++G A ++F M ++
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 428 F--------------SPPDAV----------------TVVGVLSACASLGALPLGSSIHA 457
+P ++ T+V +L+AC L G S+HA
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHA 274
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
++ L S S+ + TAL++ Y KC + AR +FD + +N VTW+ MI + + G
Sbjct: 275 SLIRTFLNS-SVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPE 333
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM 577
G + LF M+ P+EV F VL C+ +G+V +G + +M E P+ H CM
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCM 393
Query: 578 VDLLARAGNLKEALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELHP 634
+L + AG +EA + + +P V P + + L LGE + ++E P
Sbjct: 394 ANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLVEI 679
YY L+ N+Y+ GRW V +VREM+K+R + ++PGC LV++
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 49/310 (15%)
Query: 49 KFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN 104
+ HA LI G D+ +LL + FG + ++ + L+ + + Y +++
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIG--KLYCANPVFKAYLVSS 97
Query: 105 LHSDVVSFY-HLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARL-HCHVIKSGPSDGF- 161
+ FY + R+ GF D F + L +C E V + ++ H IK G
Sbjct: 98 SPKQALGFYFDILRF--GFVPDSYTF-VSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLP 154
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRM---- 217
V N L+ Y+ CG + A+K+F EI +R++VSW S+ V+N + +LF+ M
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 218 ----------------------------REGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
R GF GN+ T+ L+ AC + L +G+ VH
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGF-QGNESTLVLLLNACGRSARLKEGRSVH 273
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
++++ ++ + + T+L++MY KC ++G AR++FD + + V+W MI+ +
Sbjct: 274 ASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK----VTWNVMILAHCLH 329
Query: 310 GHPLKALELF 319
G P LELF
Sbjct: 330 GRPEGGLELF 339
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 5/281 (1%)
Query: 35 LYLSPICKNIDTVKKFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFK 94
+++ C +D KK + +++ G + A +LFD +P N+ S+
Sbjct: 160 MHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWN 219
Query: 95 AMLRWYF-LNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVI 153
M+ Y NN + F + R GF + ++L AC + + +H +I
Sbjct: 220 IMISAYLGANNPGVSISLFREMVR--AGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 154 KSGPSDGFVLN-GLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLR 212
++ + V++ L+D Y KC V AR++FD ++ RN V+W M +A+ + GL
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 213 LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKS-GIHVNSFLATSLLNMY 271
LF M G + ++ T ++ C + G + QG+ + +V I N + N+Y
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHP 312
G +A + + D + W ++ G+P
Sbjct: 398 SSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNP 438
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 178/353 (50%), Gaps = 34/353 (9%)
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSG------- 411
K G + V+ AL+ MY + DA VF+ +++ V+WN I+G G
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 412 ------------------------SAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLG 447
EA+ +F RM + P+ +T++ +L A +LG
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 448 ALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM--GEKNAVTWSA 505
L + S+HA+ K G V C I V +L++ YAKCG +SA F + G KN V+W+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 506 MISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG-SRLFHMMCRE 564
MIS + + G G ++++F+DM + +PN V SVL ACSH G+ E F+ M E
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 565 LNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEV 624
P +KHY C+VD+L R G L+EA ++P++ V+ L C ++ + EL E
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 625 AIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
R+++EL YVL+SN++ GR+ ++ R+ + RG+ K+PG S V
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 124/299 (41%), Gaps = 42/299 (14%)
Query: 161 FVLNGLVDAYSKCGHVCSARKVFDEIAERN------------------------------ 190
+V LV Y G++ A KVFDE+ ERN
Sbjct: 159 YVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNR 218
Query: 191 -VVSWTSMFVAYVQNDCAVEGLRLFNRMRE-GFVDGNDFTVGSLVTACTKLGSLHQGKWV 248
VVSWT++ Y + D E + LF+RM + N+ T+ +++ A LG L V
Sbjct: 219 TVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSV 278
Query: 249 HGYVVKSG-IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
H YV K G + + + SL++ Y KCG I A K F E+ + +LVSWT MI ++
Sbjct: 279 HAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEI--PNGRKNLVSWTTMISAFA 336
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGML--LHGLVVKCGLFDN 365
G +A+ +F D G+ PN L + +V + + +
Sbjct: 337 IHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPD 396
Query: 366 TPVRNALIDMYAKCHLVSDARYV-FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
L+DM + + +A + E +++ V W + C S Y+ E+ +R+
Sbjct: 397 VKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGAC----SVYDDAELAERV 451
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 38/312 (12%)
Query: 254 KSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM--------------LTSDDELD---- 295
K G + ++ T+L+ MY+ G++ DA KVFDEM LT+ + +
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 296 ---------LVSWTAMIVGYSQRGHPLKALELFTDRNWA--GILPNXXXXXXXXXXXXXX 344
+VSWT +I GY++ P +A+ LF+ R A I PN
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFS-RMVACDAIKPNEITILAILPAVWNL 269
Query: 345 XXXXMGMLLHGLVVKCGLFD-NTPVRNALIDMYAKCHLVSDA-RYVFET-TVQKDVVSWN 401
M +H V K G + V N+LID YAKC + A ++ E +K++VSW
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 402 SFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAF--A 459
+ IS A G EA+ MF+ M P+ VT++ VL+AC S G L + F
Sbjct: 330 TMISAFAIHGMGKEAVSMFKDMERLGLK-PNRVTMISVLNAC-SHGGLAEEEFLEFFNTM 387
Query: 460 LKDGLVSCSIYVGTALLNFYAKCGDAKSA-RMVFDGMGEKNAVTWSAMISGYGMQGDGVG 518
+ + ++ + L++ + G + A ++ + E+ AV W ++ + D
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
Query: 519 SIALFRDMLKEE 530
+ + R +++ E
Sbjct: 448 AERVTRKLMELE 459
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 132 VLKACSELRDVVQAARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSARKVFDEI--A 187
+L A L D+ +H +V K G P D V N L+DAY+KCG + SA K F EI
Sbjct: 262 ILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNG 321
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
+N+VSWT+M A+ + E + +F M + N T+ S++ AC+ G L + ++
Sbjct: 322 RKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH-GGLAEEEF 380
Query: 248 VHGYVVKSGIHVNSFLATS-------LLNMYVKCGDIGDARKVFDEM 287
+ + VN + T L++M + G + +A K+ E+
Sbjct: 381 LEFF----NTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEI 423
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 189/414 (45%), Gaps = 36/414 (8%)
Query: 299 WTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVV 358
+ +I Y G +L LFT + + PN G+ LHG +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALE 418
K G + V+ + + Y + + +R +F+ + VV+ NS + C ++G A E
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 419 MFQRM---------------------------------RSESFSPPDAVTVVGVLSACAS 445
FQRM + P+ T V VLS+CA+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 446 L--GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTW 503
G + LG IH + + ++ + +GTALL+ Y K GD + A +FD + +K W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIIL-TTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 504 SAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCR 563
+A+IS G ++ +F M PN + ++L AC+ S +V G +LF +C
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 564 ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
E +P+ +HY C+VDL+ RAG L +A +FI +P +P SV GA L C +H ELG
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 624 VAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSLV 677
++++ L P YV +S A D W +++R+ + + G+ K+P S++
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 33/291 (11%)
Query: 194 WTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVV 253
+ ++ +Y+ L LF M V N+ T SL+ A S+ G +HG +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 254 KSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT--------------SDDEL----- 294
K G + F+ TS + Y + GD+ +RK+FD++L + E+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 295 --------DLVSWTAMIVGYSQRGHPLKALELFTD---RNWAGILPNXXXXXXXXXXXXX 343
D+VSWT +I G+S++G KAL +F + A I PN
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 344 XXX--XXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWN 401
+G +HG V+ + T + AL+DMY K + A +F+ K V +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 402 SFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
+ IS A +G +ALEMF+ M+S S+ P+ +T++ +L+ACA + LG
Sbjct: 294 AIISALASNGRPKQALEMFEMMKS-SYVHPNGITLLAILTACARSKLVDLG 343
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 47/302 (15%)
Query: 124 HDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKV 182
++L S++ ACS V LH +K G D FV V Y + G + S+RK+
Sbjct: 85 NNLTFPSLIKAACSSF-SVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKM 143
Query: 183 FDEIAE--------------RN-----------------VVSWTSMFVAYVQNDCAVEGL 211
FD+I RN VVSWT++ + + + L
Sbjct: 144 FDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKAL 203
Query: 212 RLFNRM---REGFVDGNDFTVGSLVTACTKL--GSLHQGKWVHGYVVKSGIHVNSFLATS 266
+F M + N+ T S++++C G + GK +HGYV+ I + + L T+
Sbjct: 204 MVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTA 263
Query: 267 LLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG 326
LL+MY K GD+ A +FD++ + + +W A+I + G P +ALE+F +
Sbjct: 264 LLDMYGKAGDLEMALTIFDQI----RDKKVCAWNAIISALASNGRPKQALEMFEMMKSSY 319
Query: 327 ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRN---ALIDMYAKCHLVS 383
+ PN +G+ L + C + P ++D+ + L+
Sbjct: 320 VHPNGITLLAILTACARSKLVDLGIQLFSSI--CSEYKIIPTSEHYGCVVDLIGRAGLLV 377
Query: 384 DA 385
DA
Sbjct: 378 DA 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 40/229 (17%)
Query: 50 FHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRW------ 99
H + GF D T + Y G L +R++FD + +P + + ++L
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 100 ------YFLNNLHSDVVSFYH---------LTRYTLGFFHDLV------------VFSIV 132
YF +DVVS+ L L F +++ F V
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 133 LKACSELRD--VVQAARLHCHVI-KSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER 189
L +C+ + ++H +V+ K + L+D Y K G + A +FD+I ++
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTK 238
V +W ++ A N + L +F M+ +V N T+ +++TAC +
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACAR 336
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 161/324 (49%), Gaps = 40/324 (12%)
Query: 32 PPTLYLSPICKNIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPS 87
P Y C N +K+ H +I H D +L+S+ +SFG ++A +F+ L S
Sbjct: 21 PEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 88 PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAAR 147
P+ ++ M+R +N+ + + + L + D F V+KAC + +
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 148 LHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEI-------------------- 186
+H IK+G +D F N L+D Y KCG S RKVFD++
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 187 ---AE--------RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTA 235
AE RNVVSWT+M AYV+N E +LF RM+ V N+FT+ +L+ A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
T+LGSL G+WVH Y K+G ++ FL T+L++MY KCG + DARKVFD M
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGK----S 316
Query: 296 LVSWTAMIVGYSQRGHPLKALELF 319
L +W +MI G +AL LF
Sbjct: 317 LATWNSMITSLGVHGCGEEALSLF 340
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 200/426 (46%), Gaps = 58/426 (13%)
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
C+ L Q +H ++K + + L L+++ G+ A VF+++ +
Sbjct: 29 TCSNFSQLKQ---IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST-- 83
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILP--------NXXXXXXXXXXXXXXXX 346
+W MI S P +AL LF IL +
Sbjct: 84 --FTWNLMIRSLSVNHKPREALLLF-------ILMMISHQSQFDKFTFPFVIKACLASSS 134
Query: 347 XXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCH-------------------------- 380
+G +HGL +K G F++ +N L+D+Y KC
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 381 LVSD-----ARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVT 435
LVS+ A VF ++VVSW + I+ ++ EA ++F+RM+ + P + T
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP-NEFT 253
Query: 436 VVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM 495
+V +L A LG+L +G +H +A K+G V ++GTAL++ Y+KCG + AR VFD M
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFDVM 312
Query: 496 GEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKE-ECEPNEVVFTSVLAACSHSGMVGEG 554
K+ TW++MI+ G+ G G +++LF +M +E EP+ + F VL+AC+++G V +G
Sbjct: 313 QGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Query: 555 SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV-SVFG-AYLHG 612
R F M + P +H ACM+ LL +A +++A + ++ M P S FG Y G
Sbjct: 373 LRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNSSFGNEYTDG 432
Query: 613 CGLHSE 618
+E
Sbjct: 433 MNETNE 438
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 156/352 (44%), Gaps = 32/352 (9%)
Query: 130 SIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAE 188
S L+ CS Q ++H +IK +D ++ L+ S G A VF+++
Sbjct: 24 SYFLRTCSNFS---QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 189 RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND-FTVGSLVTACTKLGSLHQGKW 247
+ +W M + N E L LF M D FT ++ AC S+ G
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM--------------LTSDDE 293
VHG +K+G + F +L+++Y KCG RKVFD+M L S+ +
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 294 LD-------------LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXX 340
LD +VSWTAMI Y + P +A +LF + PN
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 341 XXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSW 400
MG +H K G + + ALIDMY+KC + DAR VF+ K + +W
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 401 NSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
NS I+ G EAL +F+ M E+ PDA+T VGVLSACA+ G + G
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 120/530 (22%), Positives = 234/530 (44%), Gaps = 62/530 (11%)
Query: 161 FVLNGLVDAYSKCGHVCSARKVFDEIAER----NVVSWTSMFVAYVQNDCAVEGLRLFNR 216
+ LN +V+A K G + ++ E+ ++V++ ++ AY E L N
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 217 MR-EGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCG 275
M +GF G +T +++ K G + K V +++SG+ +S SLL K G
Sbjct: 296 MPGKGFSPGV-YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 276 DIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXX 335
D+ + KVF +M + D DLV +++M+ +++ G+ KAL F AG++P
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP------ 408
Query: 336 XXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK 395
DN + LI Y + ++S A + +Q+
Sbjct: 409 ----------------------------DNV-IYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 396 ----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPL 451
DVV++N+ + G + EA ++F M +E PD+ T+ ++ LG L
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTILIDGHCKLGNLQ- 497
Query: 452 GSSIHAF-ALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAM 506
+++ F +K+ + + LL+ + K GD +A+ ++ M K +++S +
Sbjct: 498 -NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 507 ISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELN 566
++ +G + ++ +M+ + +P ++ S++ SG +G M E
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-G 615
Query: 567 FVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQ-----PGVSVFGAYLHGCGLHSEFEL 621
FVP Y ++ R N+ +A + KM + P V + + LHG ++ +
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 622 GEVAIRRMLE--LHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLN 669
EV +R+M+E ++PD++ Y +++ + D + EM+ QRG +
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML-QRGFS 724
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 165/417 (39%), Gaps = 22/417 (5%)
Query: 37 LSPICK--NIDTVKKFHASLIVHGFPGDT----KLLSLYASFGFLRHARRLFDHLPS--- 87
++ +CK + K+ A ++ G D+ LL G + ++F + S
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 88 -PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P+L F +M+ F + + D Y + G D V+++I+++ + A
Sbjct: 372 VPDLVCFSSMMSL-FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 147 RLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
L +++ G + D N ++ K + A K+F+E+ ER + + +
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 206 CAVEGLR----LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
C + L+ LF +M+E + + T +L+ K+G + K + +V I
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
+ L+N G + +A +V+DEM++ + + ++ +MI GY + G+
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 322 RNWAGILPNXXXXXXXXX--XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKC 379
G +P+ G++ + GL + N+++ + +
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 380 HLVSDA----RYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPD 432
+ + +A R + E V D ++ I+G + EA + M FSP D
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 127/239 (53%), Gaps = 8/239 (3%)
Query: 389 FETTVQKDV---VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
++TTV V V+ +F S C Q G+ EA+E+ + ++ ++ D + ++G+ C
Sbjct: 74 YKTTVSPSVAQNVTIETFDSLCIQ-GNWREAVEVLDYLENKGYAM-DLIRLLGLAKLCGK 131
Query: 446 LGALPLGSSIHAFALKDGLVS-CSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWS 504
AL +H + LVS C + A++ Y+ C A VF+ M E N+ T
Sbjct: 132 PEALEAARVVHECII--ALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLC 189
Query: 505 AMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRE 564
M+ + G G +I LF +E +PN +F V + C+ +G V EGS F M RE
Sbjct: 190 VMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYRE 249
Query: 565 LNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
VPSM+HY + +LA +G+L EAL+F+++MP++P V V+ ++ +H + ELG+
Sbjct: 250 YGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGD 308
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARL--HCHVIKSGPSDGFVLNGLVDAYSKCGHVCS 178
G+ DL+ + K C + + ++AAR+ C + P D N +++ YS C V
Sbjct: 114 GYAMDLIRLLGLAKLCGK-PEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDD 172
Query: 179 ARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTK 238
A KVF+E+ E N + M +V N E + LF R +E N + + CT
Sbjct: 173 ALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTL 232
Query: 239 LGSLHQG 245
G + +G
Sbjct: 233 TGDVKEG 239
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 224/537 (41%), Gaps = 74/537 (13%)
Query: 153 IKSGPSDGFVLNGLVDAYSKCGHVCSA----RKVFDEIAERNVVSWTSMFVAYVQNDCAV 208
++ PS+ V + LV+ K G + A ++V D N+ + ++ + +
Sbjct: 326 LRFSPSEAAV-SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 209 EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLL 268
E LF+RM + + ND T L+ + G L G +V +G+ ++ + SL+
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 269 NMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL 328
N + K GDI A EM+ E +V++T+++ GY +G KAL L+ + GI
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 329 PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYV 388
P+ LL GL + L+ DA +
Sbjct: 505 PSIYTFTT---------------LLSGLF--------------------RAGLIRDAVKL 529
Query: 389 F----ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
F E V+ + V++N I G + G +A E + M +E PD + ++
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM-TEKGIVPDTYSYRPLIH--- 585
Query: 445 SLGALPLGSSIHAFALKDGLVSCSIYVG----TALLNFYAKCGDAKSARMVFDGMGEK-- 498
G G + A DGL + + T LL+ + + G + A V M ++
Sbjct: 586 --GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 499 --NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSR 556
+ V + +I G D L ++M +P++V++TS++ A S +G E
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 557 LFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLH 616
++ +M E VP+ Y +++ L +AG + EA KM QP SV +GC L
Sbjct: 704 IWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM--QPVSSVPNQVTYGCFLD 760
Query: 617 SEFELGEVAIRRMLELH--------PDQACYYVLVSNLYASDGRWGMVKQVREMIKQ 665
GEV +++ +ELH + A Y +L+ R G +++ E+I +
Sbjct: 761 I-LTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC----RQGRIEEASELITR 812
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 167/434 (38%), Gaps = 62/434 (14%)
Query: 267 LLNMYVKCGDIGDARKVFDEMLTSDDEL-DLVSWTAMIVGYSQRGHPLKALELFTDRNWA 325
L+ YV+ + D VF M+T L ++ + +A++ G + H A+ELF D
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 326 GILPNXXXXXXXXXXXXXXXXXXMG--MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVS 383
GI P+ M+ H C + N N LID K V
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV--NIVPYNVLIDGLCKKQKVW 279
Query: 384 DARYVFETTVQKD----VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVT---V 436
+A + + KD VV++ + + G + LEM M FSP +A V
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 437 VGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
G+ AL L + F VS +++V AL++ K A ++FD MG
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFG-----VSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 497 E----KNAVTWS-----------------------------------AMISGYGMQGDGV 517
+ N VT+S ++I+G+ GD
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM 577
+ +M+ ++ EP V +TS++ G + + RL+H M + PS+ + +
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTL 513
Query: 578 VDLLARAGNLKEALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--L 632
+ L RAG +++A+ ++M V+P + + G + ++ M E +
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 633 HPDQACYYVLVSNL 646
PD Y L+ L
Sbjct: 574 VPDTYSYRPLIHGL 587
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 124/630 (19%), Positives = 250/630 (39%), Gaps = 60/630 (9%)
Query: 44 IDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLPS----PNLHSFKA 95
+D KF + +G D T ++ + L A +F+HL P +++
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 96 MLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKS 155
M+ Y + S R G ++ ++ +L ++ V +A ++ + K
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQR-AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Query: 156 GPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER----NVVSWTSMFVAYVQNDCAVEGL 211
+ N L+D + G + +A ++ D + + NV + M ++ E
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 212 RLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMY 271
+F M ++ T SL+ K+G + V+ ++ S NS + TSL+ +
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
G D K++ +M+ + DL + + G P K +F + +P+
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 332 XXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFET 391
+L+HGL +K G + T Y + + + V +T
Sbjct: 553 RSY---------------SILIHGL-IKAGFANET---------YELFYSMKEQGCVLDT 587
Query: 392 TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPL 451
++N I G + G +A ++ + M+++ F P VT V+ A + L
Sbjct: 588 R------AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT-VVTYGSVIDGLAKIDRLDE 640
Query: 452 GSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMI 507
+ A K + ++ + ++L++ + K G A ++ + + +K N TW++++
Sbjct: 641 AYMLFEEA-KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 508 SGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNF 567
+ ++ F+ M + +C PN+V + ++ + + M ++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-GM 758
Query: 568 VPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV---SVFGAYLHGCGLHSE----FE 620
PS Y M+ LA+AGN+ EA D+ GV + + A + G + F
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 621 LGEVAIRRMLELHPDQACYYVLVSNLYASD 650
L E RR L +H ++ C VL+ L+ +D
Sbjct: 819 LFEETRRRGLPIH-NKTC-VVLLDTLHKND 846
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/530 (18%), Positives = 204/530 (38%), Gaps = 42/530 (7%)
Query: 166 LVDAYSKCGHVCSARKVFDEIAE----RNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGF 221
L+ A+S H +F ++ E V +T++ + + L L + M+
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 222 VDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDAR 281
+D + + + K+G + + +G+ + TS++ + K + +A
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 282 KVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXX 341
++F+ + + ++ MI+GY G +A L + G +P+
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS-----VIAYNC 348
Query: 342 XXXXXXXMGMLLHGLVV----KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK-- 395
MG + L V K N N LIDM + + D + ++QK
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKL-DTAFELRDSMQKAG 407
Query: 396 ---DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLG 452
+V + N + +S EA MF+ M PD +T ++ +G +
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 453 SSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYG- 511
++ L + SI + + NF+ G + ++ M +N +++ Y
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNH-GRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 512 ---MQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFV 568
G+ A+F ++ P+ ++ ++ +G E LF+ M +E V
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM-KEQGCV 584
Query: 569 PSMKHYACMVDLLARAGNLKEALDFIDKMPV---QPGVSVFGAYLHGCG----LHSEFEL 621
+ Y ++D + G + +A +++M +P V +G+ + G L + L
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 622 GEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMVKQ---VREMIKQRGL 668
E A + +EL+ V+ S+L G+ G + + + E + Q+GL
Sbjct: 645 FEEAKSKRIELN------VVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 20/279 (7%)
Query: 402 SFISGCAQSGSAYEALEMFQRMRSESFSPPDA--VTVVGVLSACA-SLGALPLGSSIHAF 458
+ GC ++ E ++ Q MR F P + T++G SA S L L +
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 459 ALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG----EKNAVTWSAMISGYGMQG 514
+ ++++ T L+ +AK G SA + D M + + V ++ I +G G
Sbjct: 198 GYEP-----TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
+ F ++ +P+EV +TS++ + + E +F + + VP Y
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR-VPCTYAY 311
Query: 575 ACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEV--AIRRMLEL 632
M+ AG EA +++ + + AY C L ++G+V A++ E+
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY--NCILTCLRKMGKVDEALKVFEEM 369
Query: 633 HPDQA---CYYVLVSNLYASDGRWGMVKQVREMIKQRGL 668
D A Y ++ ++ G+ ++R+ +++ GL
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 398 VSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHA 457
V+ +F + C Q EALE+ + + + D ++G+ C + AL +H
Sbjct: 79 VTIETFDALCKQV-KIREALEVIDILEDKGY-IVDFPRLLGLAKLCGEVEALEEARVVH- 135
Query: 458 FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGV 517
D + ++ Y+ C A VF+ M ++N+ TW MI G+G
Sbjct: 136 ----DCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGE 191
Query: 518 GSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACM 577
+I +F ++E +P++ +F +V AC G + EG F M R+ V SM+ Y +
Sbjct: 192 RAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNV 251
Query: 578 VDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
+++LA G+L EALDF+++M V+P V ++ ++ C + ELG+
Sbjct: 252 IEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/537 (21%), Positives = 220/537 (40%), Gaps = 61/537 (11%)
Query: 171 SKCGHVCSARKVFDEIAERNVV----SWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGND 226
SK G + A+ +FD + ++ ++ S+ Y + +G L M++ + +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 227 FTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDE 286
+T G++V G L + ++ SG N + T+L+ +++ GDA +V E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 287 MLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXX 346
M D+ + ++I+G S+ +A + G+ PN
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 347 XXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNS 402
+ +CG+ N + LI+ Y K V +A + + V + D ++
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD 462
++G ++ +A E+F+ MR + + PD + +++ + LG + SSI +++
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIA-PDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVG 518
GL ++ + LL + + G+ + A+ + D M K NAVT+ +I GY GD
Sbjct: 657 GLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 519 SIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF-------------------- 558
+ LF +M + P+ V+T+++ C V +F
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINW 775
Query: 559 -------HMMCRELNFV----------PSMKHYACMVDLLARAGNLKEALDFIDKMP--- 598
+ LN + P+ Y M+D L + GNL+ A + +M
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 599 VQPGVSVFGAYLHG---CGLHSE-FELGEVAIRRMLELHPDQACYYVLVSNLYASDG 651
+ P V + + L+G G +E F + + AI +E PD Y V++ N + +G
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE--PDHIMYSVII-NAFLKEG 889
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 206/543 (37%), Gaps = 58/543 (10%)
Query: 125 DLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSARKVF 183
++V+++ ++K + A R+ + + G + D F N L+ SK + AR
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 184 DEIAER----NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
E+ E N ++ + Y++ + MRE V N L+ K
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
G + + + +V GI ++ T L+N K + DA ++F EM D+ S+
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 300 TAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVK 359
+I G+S+ G+ KA +F + G+ PN MLL G
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY---------------NMLLGGF--- 672
Query: 360 CGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEM 419
C + + L +M K + + V++ + I G +SG EA +
Sbjct: 673 CRSGEIEKAKELLDEMSVK-------------GLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFY 479
F M+ + P D+ ++ C L + +I K S + + AL+N+
Sbjct: 720 FDEMKLKGLVP-DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF--NALINWV 776
Query: 480 AKCGDAKSARMV--------FDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEEC 531
K G + V FD G+ N VT++ MI +G+ + LF M
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 532 EPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEAL 591
P + +TS+L G E +F P Y+ +++ + G +AL
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 592 DFIDKMPVQPGV--------SVFGAYLHGCGLHSEFELGEVAIRRMLELH--PDQACYYV 641
+D+M + V S A L G E E+ E + M+ L PD A
Sbjct: 896 VLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIE 955
Query: 642 LVS 644
L++
Sbjct: 956 LIN 958
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%)
Query: 475 LLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPN 534
LL Y+ CG A A VF+ M EKN TW +I + G G +I +F +E P+
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 535 EVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFI 594
+F + AC G V EG F M R+ PS++ Y +V++ A G L EAL+F+
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 595 DKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
++MP++P V V+ ++ +H ELG+
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
L++MY+ C L ++A VFE +K++ +W I A++G +A++MF R + E + P
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEG-NIP 353
Query: 432 DAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMV 491
D G+ AC LG + G +D ++ SI +L+ YA G A
Sbjct: 354 DGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEF 413
Query: 492 FDGMG-EKNAVTWSAMIS 508
+ M E N W +++
Sbjct: 414 VERMPMEPNVDVWETLMN 431
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/534 (21%), Positives = 222/534 (41%), Gaps = 33/534 (6%)
Query: 93 FKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKAC-SELRDVVQAARLHCH 151
F +++ Y +L +S HL + GF ++ ++ VL A R++ A +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQ-AHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 152 VIKSGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAER----NVVSWTSMFVAYVQNDC 206
+++S S F N L+ + G++ A +FD++ + NVV++ ++ Y +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 207 AVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATS 266
+G +L M ++ N + ++ + G + + +V + + G ++ +
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 267 LLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAG 326
L+ Y K G+ A + EML ++++T++I + G+ +A+E G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 327 ILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDAR 386
+ PN + + G + NALI+ + + DA
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 387 YVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSA 442
V E +K DVVS+++ +SG +S EAL + + M + PD +T ++
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK-PDTITYSSLIQG 494
Query: 443 CASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK---- 498
++ L+ GL + TAL+N Y GD + A + + M EK
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDE-FTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 499 NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSH----------- 547
+ VT+S +I+G Q + L + EE P++V + +++ CS+
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 548 ----SGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
GM+ E ++F M + N P Y M+ RAG++++A +M
Sbjct: 614 GFCMKGMMTEADQVFESMLGK-NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 128/318 (40%), Gaps = 61/318 (19%)
Query: 370 NALIDMYAKCHL-VSDARYVF----ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMR 424
NA++D + +S A VF E+ V +V ++N I G +G+ AL +F +M
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLG----SSIHAFALKDGLVSCSIYVGTALLNFYA 480
++ P+ VT ++ L + G S+ L+ L+S ++ ++N
Sbjct: 233 TKG-CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV-----VINGLC 286
Query: 481 KCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
+ G K V M + + VT++ +I GY +G+ ++ + +ML+ P+ +
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
+TS L H MC+ AGN+ A++F+D+
Sbjct: 347 TYTS----------------LIHSMCK--------------------AGNMNRAMEFLDQ 370
Query: 597 MPVQ---PGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSNLYASDG 651
M V+ P + + G +R M + P Y L+ N + G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI-NGHCVTG 429
Query: 652 RWGMVKQVREMIKQRGLN 669
+ V E +K++GL+
Sbjct: 430 KMEDAIAVLEDMKEKGLS 447
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 173/410 (42%), Gaps = 11/410 (2%)
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
+V S+ ++ + + + L L N M+ + T G L+ A K G + +
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
+ G+ + + TSL+ + CG++ + +FDE+L D +++ +I G+ +
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
G +A E+F G+ PN + L L+++ N
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Query: 370 NALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRM-R 424
N +I+ K LV+DA + E ++ D +++N + G G EA ++ M +
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Query: 425 SESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
S++ PD ++ ++ L I+ L + L + LLN K GD
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDL-LVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 485 AKSA----RMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
A + + D +N+ T++AMI G+ G + L M E +P+ +
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 541 VLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEA 590
+L++ G + + RLF M R+ NF P + + M+D +AG++K A
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSA 583
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 129/337 (38%), Gaps = 55/337 (16%)
Query: 382 VSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS------------ 429
VS R + ++ DV S+N+ I G + +ALE+ M+ S
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA 221
Query: 430 ----------------------PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSC 467
D V ++ G L G ++ L+ G C
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALF 523
+I T L+ + K G K A +F+ M E+ N T++ +I G G ++ L
Sbjct: 282 AITYNT-LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 524 RDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLAR 583
M++++ EPN V + ++ G+V + + +M ++ P Y ++ L
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM-KKRRTRPDNITYNILLGGLCA 399
Query: 584 AGNLKEALDFI-----DKMPVQPGVSVFGAYLHG-CG---LHSEFELGEVAIRRMLELHP 634
G+L EA + D P V + A +HG C LH ++ ++ + ++
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL----- 454
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKV 671
A V + L S + G V + E+ KQ +K+
Sbjct: 455 -GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 184/416 (44%), Gaps = 11/416 (2%)
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
+V+S++++ Y + + +L M+ + N + GS++ ++ L + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
+++ GI ++ + T+L++ + K GDI A K F EM + D D++++TA+I G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
G ++A +LF + G+ P+ +H +++ G N
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 370 NALIDMYAKCHLVSDARYV----FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
LID K + A + ++ +Q ++ ++NS ++G +SG+ EA+++ +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
+ D VT ++ A G + I L GL +I L+N + G
Sbjct: 520 AGLN-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGML 577
Query: 486 KSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
+ + + M K NA T+++++ Y ++ + + A+++DM P+ + ++
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
+ + + E LF M + F S+ Y+ ++ + EA + D+M
Sbjct: 638 VKGHCKARNMKEAWFLFQEM-KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 127/299 (42%), Gaps = 18/299 (6%)
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEA 416
GL N+ + ++I + + +++A F +++ D V + + I G + G A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
+ F M S +P D +T ++S +G + + GL S+ T L+
Sbjct: 371 SKFFYEMHSRDITP-DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF-TELI 428
Query: 477 NFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECE 532
N Y K G K A V + M + N VT++ +I G +GD + L +M K +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 533 PNEVVFTSVLAACSHSGMVGEGSRLF-HMMCRELNFVPSMKHYACMVDLLARAGNLKEAL 591
PN + S++ SG + E +L LN Y ++D ++G + +A
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN--ADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 592 DFIDKM---PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSN 645
+ + +M +QP + F ++G LH E GE + ML + P+ + LV
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 137/322 (42%), Gaps = 15/322 (4%)
Query: 125 DLVVFSIVLKACSELRDVVQAARL-HCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVF 183
D++ ++ ++ ++ D+V+A +L H K D L++ Y K GH+ A +V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 184 DEIAER----NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
+ + + NVV++T++ + L + M + + N FT S+V K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
G++ + + G +G++ ++ T+L++ Y K G++ A+++ EML + +V++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 300 TAMIVGYSQRGHPLKALELFTDRNW---AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGL 356
++ G+ G +L NW GI PN ++
Sbjct: 565 NVLMNGFCLHGMLEDGEKLL---NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGS 412
+ G+ + L+ + K + +A ++F+ K V +++ I G +
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 413 AYEALEMFQRMRSESFSPPDAV 434
EA E+F +MR E + +
Sbjct: 682 FLEAREVFDQMRREGLAADKEI 703
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 130/309 (42%), Gaps = 16/309 (5%)
Query: 34 TLYLSPICKNIDTVK--KFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLP- 86
T +S C+ D V+ K + G D T+L++ Y G ++ A R+ +H+
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 87 ---SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVV 143
SPN+ ++ ++ H + +G ++ ++ ++ + ++
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLH-EMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 144 QAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIA----ERNVVSWTSMF 198
+A +L +G +D L+DAY K G + A+++ E+ + +V++ +
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 199 VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
+ + +G +L N M + N T SLV +L ++ + G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
+ +L+ + K ++ +A +F EM + + +++ +I G+ +R L+A E+
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 319 FTDRNWAGI 327
F G+
Sbjct: 689 FDQMRREGL 697
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 184/416 (44%), Gaps = 11/416 (2%)
Query: 190 NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVH 249
+V+S++++ Y + + +L M+ + N + GS++ ++ L + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
+++ GI ++ + T+L++ + K GDI A K F EM + D D++++TA+I G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
G ++A +LF + G+ P+ +H +++ G N
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 370 NALIDMYAKCHLVSDARYV----FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
LID K + A + ++ +Q ++ ++NS ++G +SG+ EA+++ +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
+ D VT ++ A G + I L GL +I L+N + G
Sbjct: 520 AGLN-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGML 577
Query: 486 KSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
+ + + M K NA T+++++ Y ++ + + A+++DM P+ + ++
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
+ + + E LF M + F S+ Y+ ++ + EA + D+M
Sbjct: 638 VKGHCKARNMKEAWFLFQEM-KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 127/299 (42%), Gaps = 18/299 (6%)
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEA 416
GL N+ + ++I + + +++A F +++ D V + + I G + G A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
+ F M S +P D +T ++S +G + + GL S+ T L+
Sbjct: 371 SKFFYEMHSRDITP-DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF-TELI 428
Query: 477 NFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECE 532
N Y K G K A V + M + N VT++ +I G +GD + L +M K +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 533 PNEVVFTSVLAACSHSGMVGEGSRLF-HMMCRELNFVPSMKHYACMVDLLARAGNLKEAL 591
PN + S++ SG + E +L LN Y ++D ++G + +A
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN--ADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 592 DFIDKM---PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSN 645
+ + +M +QP + F ++G LH E GE + ML + P+ + LV
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 137/322 (42%), Gaps = 15/322 (4%)
Query: 125 DLVVFSIVLKACSELRDVVQAARL-HCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVF 183
D++ ++ ++ ++ D+V+A +L H K D L++ Y K GH+ A +V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 184 DEIAER----NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
+ + + NVV++T++ + L + M + + N FT S+V K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 240 GSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
G++ + + G +G++ ++ T+L++ Y K G++ A+++ EML + +V++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 300 TAMIVGYSQRGHPLKALELFTDRNW---AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGL 356
++ G+ G +L NW GI PN ++
Sbjct: 565 NVLMNGFCLHGMLEDGEKLL---NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGS 412
+ G+ + L+ + K + +A ++F+ K V +++ I G +
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 413 AYEALEMFQRMRSESFSPPDAV 434
EA E+F +MR E + +
Sbjct: 682 FLEAREVFDQMRREGLAADKEI 703
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 130/309 (42%), Gaps = 16/309 (5%)
Query: 34 TLYLSPICKNIDTVK--KFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHLP- 86
T +S C+ D V+ K + G D T+L++ Y G ++ A R+ +H+
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 87 ---SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVV 143
SPN+ ++ ++ H + +G ++ ++ ++ + ++
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLH-EMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 144 QAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIA----ERNVVSWTSMF 198
+A +L +G +D L+DAY K G + A+++ E+ + +V++ +
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 199 VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
+ + +G +L N M + N T SLV +L ++ + G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
+ +L+ + K ++ +A +F EM + + +++ +I G+ +R L+A E+
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 319 FTDRNWAGI 327
F G+
Sbjct: 689 FDQMRREGL 697
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 6/216 (2%)
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKD-GLVSC 467
+ G +A+E+ + R+E + D + + C AL +H F G+
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVV-DLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDI 216
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDML 527
S Y +++ Y+ CG + A VF+ M E+N TW +I + G G +I F
Sbjct: 217 SAY--NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 528 KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
+E +P+ +F + AC G + EG F M +E +P M+HY +V +LA G L
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 588 KEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGE 623
EAL F++ M +P V ++ ++ +H + LG+
Sbjct: 335 DEALRFVESM--EPNVDLWETLMNLSRVHGDLILGD 368
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKS-GPSDGFVLNGLVDAYSKCGHVCSA 179
G+ DL + + C + + + +A +H + S G SD N +++ YS CG V A
Sbjct: 176 GYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDA 235
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
VF+ + ERN+ +W + + +N + + F+R ++ + + AC L
Sbjct: 236 LTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVL 295
Query: 240 GSLHQG 245
G +++G
Sbjct: 296 GDMNEG 301
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 111/567 (19%), Positives = 224/567 (39%), Gaps = 62/567 (10%)
Query: 43 NIDTVKKFHASLIVHGFPGD----TKLLSLYASFGFLRHARRLFDHL----PSPNLHSFK 94
N+D + ++ G + T L++ + L A LFD + PSPN +F
Sbjct: 319 NMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFS 378
Query: 95 AMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK 154
++ W+ N + FY LG + +++ + + +A +L +
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKME-VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 155 SGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER----NVVSWTSMFVAYVQNDCAVEG 210
+G ++ FV N ++ K G A ++ ++ R NVVS+ ++ + + +
Sbjct: 438 TGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
+F+ + E + N++T L+ C + V ++ S I VN + +++N
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Query: 271 YVKCGDIGDARKVFDEMLTSDDE-LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILP 329
K G AR++ M+ + +S+ ++I G+ + G A+ + + GI P
Sbjct: 558 LCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP 617
Query: 330 NXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF 389
N + + + G+ + P ALID + K + A +F
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 390 ETTVQKDVVS----WNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
+++ + +NS ISG G+ AL+++++M
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM---------------------- 715
Query: 446 LGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE----KNAV 501
LKDGL C + T L++ K G+ A ++ M + +
Sbjct: 716 --------------LKDGL-RCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 502 TWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
++ +++G +G V + +F +M K PN +++ +V+A G + E RL M
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Query: 562 CRELNFVPSMKHYACMVDLLARAGNLK 588
+ +P + +V + GNL+
Sbjct: 821 L-DKGILPDGATFDILVS--GQVGNLQ 844
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 124/603 (20%), Positives = 231/603 (38%), Gaps = 74/603 (12%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNN-LHSDVVSFYHLTRYTLG 121
+KL+ SFGF ++R F++L + + +N L DV+ F+ TL
Sbjct: 148 SKLVDSAKSFGFEVNSR-AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSAR 180
A + + +A L+ ++ G D L+ A + A
Sbjct: 207 -------------ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEAL 253
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDG-----NDFTVGSLVTA 235
+V ER + ++ VQ C L + N + + + T S++ A
Sbjct: 254 EVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILA 313
Query: 236 CTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
K G++ + ++ GI +N ATSL+ + K D+ A +FD+M +
Sbjct: 314 SVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPN 373
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHG 355
V+++ +I + + G KALE + G+ P+ + H
Sbjct: 374 SVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPS---------------------VFHV 412
Query: 356 LVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYE 415
+ G AL L ++ FET + +V N+ +S + G E
Sbjct: 413 HTIIQGWLKGQKHEEAL-------KLFDES---FETGL-ANVFVCNTILSWLCKQGKTDE 461
Query: 416 ALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTAL 475
A E+ +M S P+ V+ V+ + L + + L+ GL + Y + L
Sbjct: 462 ATELLSKMESRGIG-PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN-YTYSIL 519
Query: 476 LNFYAKCGDAKSARMVFDGMG----EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE- 530
++ + D ++A V + M E N V + +I+G G + L +M++E+
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 531 ----CEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGN 586
C + + S++ G + + MC P++ Y +++ L +
Sbjct: 580 LCVSC----MSYNSIIDGFFKEGEMDSAVAAYEEMCGN-GISPNVITYTSLMNGLCKNNR 634
Query: 587 LKEALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYV 641
+ +AL+ D+M V+ + +GA + G S E +LE L+P Q Y
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 642 LVS 644
L+S
Sbjct: 695 LIS 697
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 17/268 (6%)
Query: 431 PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
PD V + +CA+L +L +H L+ + +++ + +C A+
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG-DPKLNNMVISMFGECSSITDAKR 292
Query: 491 VFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGM 550
VFD M +K+ +W M+ Y G G ++ LF +M K +PNE F +V AC+ G
Sbjct: 293 VFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGG 352
Query: 551 VGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYL 610
+ E F M E P +HY ++ +L + G+L EA +I +P +P + A
Sbjct: 353 IEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMR 412
Query: 611 HGCGLHSEFELGEVAIRRMLELHPDQACYYVLVSNLYASDGRWGMV-------------- 656
+ LH + +L + M+++ P +A + + S MV
Sbjct: 413 NYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTF 472
Query: 657 --KQVREMIKQRGLNKVPGCSLVEIDLN 682
+ +EM ++G+ VP V D++
Sbjct: 473 YKDEAKEMAAKKGVVYVPDTRFVLHDID 500
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSA 179
G D F ++ ++C+ L+ + + ++H H ++S D + N ++ + +C + A
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 180 RKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKL 239
++VFD + ++++ SW M AY N + L LF M + + N+ T ++ AC +
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 240 GSLHQGKWVHGYVVKS--GIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
G + + ++H +K+ GI + +L + KCG + +A + ++
Sbjct: 351 GGIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDL 399
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
L +C L SL K VH + ++S + L +++M+ +C I DA++VFD M+
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV--- 298
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
+ D+ SW M+ YS G AL LF + G+ PN
Sbjct: 299 -DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS 412
+H ++ + + N +I M+ +C ++DA+ VF+ V KD+ SW+ + + +G
Sbjct: 258 VHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGM 317
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL-VSCSIYV 471
+AL +F+ M P+ T + V ACA++G + + +H ++K+ +S
Sbjct: 318 GDDALHLFEEMTKHGLK-PNEETFLTVFLACATVGGI-EEAFLHFDSMKNEHGISPKTEH 375
Query: 472 GTALLNFYAKCGD-AKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEE 530
+L KCG ++ + + D E A W AM + + GD + + + L +
Sbjct: 376 YLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGD--IDLEDYMEELMVD 433
Query: 531 CEPNEVVFTSVLAACSHS----GMVGEGSRLFHMMCRELNF 567
+P++ V + S MV SR+ R L F
Sbjct: 434 VDPSKAVINKIPTPPPKSFKETNMVTSKSRILEF--RNLTF 472
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 172/413 (41%), Gaps = 43/413 (10%)
Query: 40 ICK--NIDTVKKFHASLIVHGF-PGDTK---LLSLYASFGFLRHARRLFDHLPSPNLHSF 93
+CK I+ K +++ GF P D L++ G + A+ LF +P P + F
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF 356
Query: 94 KAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVF-SIVLKACSELRDVVQAARLHCHV 152
++ + + D + + G D+ + S++ E + LH
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 153 IKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIA----ERNVVSWTSMFVAYVQNDCAV 208
K + + LVD + K G + A V +E++ + N V + + A+ +
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 209 EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLL 268
E + +F M + +T SL++ ++ + W+ ++ G+ N+ +L+
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 269 NMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL 328
N +++ G+I +ARK+ +EM+ LD +++ ++I G + G KA LF G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 329 PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYV 388
P+ + C + N R+ +++ V + +
Sbjct: 597 PSN--------------------------ISCNILINGLCRSGMVE-----EAVEFQKEM 625
Query: 389 FETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLS 441
D+V++NS I+G ++G + L MF+++++E PPD VT ++S
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI-PPDTVTFNTLMS 677
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 127/575 (22%), Positives = 223/575 (38%), Gaps = 77/575 (13%)
Query: 58 GFPGDTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVS-FYHLT 116
GFPG T L L R ++ P S+ +L N H + FY +
Sbjct: 160 GFPGQTTRLML--------EMRNVYSC--EPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGH 175
+ L F +V+KA + ++ A L + K G + + L+ + SKC
Sbjct: 210 SRKIP--PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 176 VCSARKVFDEIAERNVV----SWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGS 231
V A ++ +E+ V ++ + + + D E ++ NRM +D T G
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
L+ K+G + K + + K I + +L++ +V G + DA+ V +M+TS
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 292 DEL-DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG 350
+ D+ ++ ++I GY + G ALE+ D G PN
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 351 MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISG 406
+ + GL NT N LI + K H + +A +F +K DV ++NS ISG
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 407 CAQSGSAYEALEMFQRMRSESF----------------------------------SPPD 432
+ AL + + M SE SP D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 433 AVTVVGVLSACASLGALPLGSSIHAFALKDG----LVSCSIYVGTALLNFYAKCGDAKSA 488
+T ++ G + S+ L+DG +SC+I L+N + G + A
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI-----LINGLCRSGMVEEA 618
Query: 489 -----RMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLA 543
MV G + VT++++I+G G + +FR + E P+ V F ++++
Sbjct: 619 VEFQKEMVLRG-STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 544 ACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMV 578
G V + L + FVP+ + ++ ++
Sbjct: 678 WLCKGGFVYDACLLLDEGIED-GFVPNHRTWSILL 711
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 109/542 (20%), Positives = 204/542 (37%), Gaps = 87/542 (16%)
Query: 170 YSKCGHVCSARKVFDEIAERNVVSWTSMFVAY-------VQNDCAVEGLRLFNRMREGFV 222
Y K G ++ E+ RNV S F +Y V +C +F M +
Sbjct: 156 YDKAGFPGQTTRLMLEM--RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 223 DGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARK 282
FT G ++ A + + + + K G NS + +L++ KC + +A +
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 283 VFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX 342
+ +EM D ++ +I+G + +A ++ G P+
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY-------- 325
Query: 343 XXXXXXMGMLLHGLVVKCG-------LFDNTP-----VRNALIDMYAKCHLVSDARYVFE 390
G L++GL K G LF P + N LI + + DA+ V
Sbjct: 326 -------GYLMNGL-CKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 391 TTVQK-----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSP--------------- 430
V DV ++NS I G + G ALE+ MR++ P
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 431 -------------------PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYV 471
P+ V ++SA +P I + G +Y
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYT 496
Query: 472 GTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDML 527
+L++ + + K A + M + N VT++ +I+ + +G+ + L +M+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 528 KEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNL 587
+ +E+ + S++ +G V + LF M R+ PS +++ L R+G +
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMV 615
Query: 588 KEALDFIDKMPVQ---PGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVL 642
+EA++F +M ++ P + F + ++G E G R++ + PD + L
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 643 VS 644
+S
Sbjct: 676 MS 677
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/593 (19%), Positives = 243/593 (40%), Gaps = 35/593 (5%)
Query: 53 SLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPS----PNLHSFKAMLRWYFLNNLHSD 108
SL V+ + T L+S +A+ G R A +F + P L ++ +L + +
Sbjct: 205 SLDVYSY---TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 109 VVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLV 167
++ + G D ++ ++ C +AA++ + +G S D N L+
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 168 DAYSKCGHVCSARKVFDEIA----ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD 223
D Y K A KV +E+ ++V++ S+ AY ++ E + L N+M E
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
+ FT +L++ + G + + + +G N + + MY G + K+
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
FDE+ D+V+W ++ + Q G + +F + AG +P
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 344 XXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF----ETTVQKDVVS 399
M ++ ++ G+ + N ++ A+ + + V + + + ++
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 400 WNSFISGCAQSGSAYEALEMFQRMRSESFS---PPDAVTVVGVLSACASLGALPLGSSIH 456
+ S + A + + + + E +S P AV + ++ C+ LP +
Sbjct: 562 YCSLLHAYANG----KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP--EAER 615
Query: 457 AFA-LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYG 511
AF+ LK+ S I ++++ Y + A V D M E+ + T+++++ +
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 512 MQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSM 571
D S + R++L + +P+ + + +V+ A + + + SR+F M R VP +
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM-RNSGIVPDV 734
Query: 572 KHYACMVDLLARAGNLKEAL---DFIDKMPVQPGVSVFGAYLHG-CGLHSEFE 620
Y + A +EA+ ++ K +P + + + + G C L+ + E
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/370 (17%), Positives = 144/370 (38%), Gaps = 45/370 (12%)
Query: 65 LLSLYASFGFLRHARRLFDHLP----SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTL 120
+ +Y + G ++FD + SP++ ++ +L + N + S+V + +
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA- 483
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS-DGFVLNGLVDAYSKCGHVCSA 179
GF + F+ ++ A S QA ++ ++ +G + D N ++ A ++ G +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 180 RKVFDEIAE----RNVVSWTSMFVAYVQN------------------------------- 204
KV E+ + N +++ S+ AY
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 205 ----DCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVN 260
D E R F+ ++E + T+ S+V+ + + + V Y+ + G +
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 261 SFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFT 320
SL+ M+ + D G + ++ E+L + D++S+ +I Y + A +F+
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 321 DRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCH 380
+ +GI+P+ + + ++K G N N+++D Y K +
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 381 LVSDARYVFE 390
+A+ E
Sbjct: 784 RKDEAKLFVE 793
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 157/357 (43%), Gaps = 10/357 (2%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P+L +F ++L Y N D ++ + +GF ++V ++ +++ + R + A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQI-LGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 147 RLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSA----RKVFDEIAERNVVSWTSMFVAY 201
L + +G V N LV + G A R + E NV+++T++ A+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 202 VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
V+ +E L+N M + V + FT GSL+ G L + + + + ++G + N
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
+ T+L++ + K + D K+F EM + +++T +I GY G P A E+F
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
+ P+ +++ + K + N +I K
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 382 VSDAR----YVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV 434
V DA +F ++ +V+++ + ISG + G +EA +F++M+ + F P ++V
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 145/356 (40%), Gaps = 11/356 (3%)
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
G ++K G + TSLLN Y I DA +FD++L + ++V++T +I +
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
H A+ELF G PN L ++K + N
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 370 NALIDMYAKCHLVSDARYVFETTVQ----KDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
ALID + K + +A+ ++ +Q DV ++ S I+G G EA +MF M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
P + + + C S + G I + G+V+ +I T L+ Y G
Sbjct: 322 NGCYPNEVIYTTLIHGFCKS-KRVEDGMKIFYEMSQKGVVANTI-TYTVLIQGYCLVGRP 379
Query: 486 KSARMVFDGMGEKNAV----TWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
A+ VF+ M + A T++ ++ G G ++ +F M K E + N V +T +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
+ G V + LF + + P++ Y M+ R G + EA KM
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/508 (21%), Positives = 191/508 (37%), Gaps = 87/508 (17%)
Query: 80 RLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSEL 139
R+ P P++ F +L N + V+S + + LG L +IV+
Sbjct: 73 RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ-ILGIPPLLCTCNIVMHCVCLS 131
Query: 140 RDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIA----ERNVVSW 194
+A+ ++K G D L++ Y + A +FD+I + NVV++
Sbjct: 132 SQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTY 191
Query: 195 TSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK 254
T++ +N + LFN+M N T +LVT ++G +W
Sbjct: 192 TTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG-----RW------- 239
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
GDA + +M+ E +++++TA+I + + G ++
Sbjct: 240 -----------------------GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALID 374
A EL+ + P+ + L+ + G + N + LI
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 375 MYAKCHLVSDARYVFETTVQKDVV----SWNSFISGCAQSGSAYEALEMFQRMRSESFSP 430
+ K V D +F QK VV ++ I G G A E+F +M S +P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR-AP 395
Query: 431 PDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARM 490
PD T +L DGL C+ G + A M
Sbjct: 396 PDIRTYNVLL---------------------DGL-CCN--------------GKVEKALM 419
Query: 491 VFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACS 546
+F+ M ++ N VT++ +I G G + LF + + +PN + +T++++
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 547 HSGMVGEGSRLFHMMCRELNFVPSMKHY 574
G++ E LF M +E F+P+ Y
Sbjct: 480 RRGLIHEADSLFKKM-KEDGFLPNESVY 506
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 20/249 (8%)
Query: 431 PDAVTVVGVLSACASLG----ALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
PD VT +L+ A+ L I K +V+ T L+ K
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVT-----YTTLIRCLCKNRHLN 205
Query: 487 SARMVFDGMG----EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVL 542
A +F+ MG N VT++A+++G G + L RDM+K EPN + FT+++
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 543 AACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALD---FIDKMPV 599
A G + E L+++M +++ P + Y +++ L G L EA +++
Sbjct: 266 DAFVKVGKLMEAKELYNVMI-QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 600 QPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSNLYASDGRWGMVK 657
P ++ +HG E G M + + + Y VL+ Y GR + +
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG-YCLVGRPDVAQ 383
Query: 658 QVREMIKQR 666
+V + R
Sbjct: 384 EVFNQMSSR 392
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/501 (19%), Positives = 200/501 (39%), Gaps = 72/501 (14%)
Query: 121 GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSAR 180
G+ D+++ + ++K LR++ +A R+ + K G D F N L++ + K + A
Sbjct: 119 GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDAT 178
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
+V D + ++ T V Y + +GSL C++ G
Sbjct: 179 RVLDRMRSKDFSPDT---VTY------------------------NIMIGSL---CSR-G 207
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
L V ++ T L+ + G + +A K+ DEML+ + D+ ++
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
+I G + G +A E+ + G P+ +LL L+ +
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY---------------NILLRALLNQG 312
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMF 420
+ + + F +VV+++ I+ + G EA+ +
Sbjct: 313 KWEEGEKLMTKM----------------FSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 421 QRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYA 480
+ M+ + +P DA + +++A G L + + DG + + T L
Sbjct: 357 KLMKEKGLTP-DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL-C 414
Query: 481 KCGDAKSARMVFDGMGE----KNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
K G A A +F +GE N+ +++ M S GD + ++ + +M+ +P+E+
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
+ S+++ GMV E L M R F PS+ Y ++ +A +++A++ ++
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 597 M---PVQPGVSVFGAYLHGCG 614
M +P + + + G G
Sbjct: 534 MVGNGCRPNETTYTVLIEGIG 554
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/508 (19%), Positives = 202/508 (39%), Gaps = 52/508 (10%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P++ + ++L Y S+ V+ + + + + V F+ ++ +A
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVD-QMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 147 RLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIA----ERNVVSWTSMFVAY 201
L ++ G D F +V+ K G + A + ++ E +VV +T++ A
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 202 VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
+ L LF M + N T SL+ G + +++ I+ N
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
++L++ +VK G + +A K++DEM+ + D+ +++++I G+ +A +F
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE- 384
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
L++ F N N LI + K
Sbjct: 385 ----------------------------------LMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 382 VSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVV 437
V + +F Q+ + V++N+ I G Q+G A ++F++M S+ PPD +T
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV-PPDIITYS 469
Query: 438 GVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE 497
+L G L + + L+ + IY ++ K G + +F +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEY-LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 498 K----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGE 553
K N + ++ MISG+ +G + ALFR+M ++ PN + +++ A G
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 554 GSRLFHMMCRELNFVPSMKHYACMVDLL 581
+ L M R FV + ++++L
Sbjct: 589 SAELIKEM-RSCGFVGDASTISMVINML 615
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 175/453 (38%), Gaps = 46/453 (10%)
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
E ++V+ +S+ Y E + L ++M N T +L+ +
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
+ +V G + F +++N K GDI A + +M E D+V +T +I
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
+ AL LFT+ + GI PN L +++ + N
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 368 VRNALIDMYAK---------------------------------C--HLVSDARYVFETT 392
+ALID + K C + +A+++FE
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 393 VQKD----VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGA 448
+ KD VV++N+ I G ++ E +E+F+ M S+ + VT ++ G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 449 LPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG----EKNAVTWS 504
+ I + DG V I + LL+ K G + A +VF+ + E + T++
Sbjct: 446 CDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 505 AMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRE 564
MI G G LF + + +PN +++T++++ G+ E LF M +E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM-KE 563
Query: 565 LNFVPSMKHYACMVDLLARAGNLKEALDFIDKM 597
+P+ Y ++ R G+ + + I +M
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 166/413 (40%), Gaps = 14/413 (3%)
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
+ L RM+ + + ++ L+ + L V G ++K G + +SLLN
Sbjct: 100 ISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG 159
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y I +A + D+M + + + V++ +I G +A+ L G P+
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD 219
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE 390
+ + L + K + + + +ID V+DA +F
Sbjct: 220 LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 279
Query: 391 TT----VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
++ +VV++NS I G +A + M + P+ VT ++ A
Sbjct: 280 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKE 338
Query: 447 GALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVT 502
G L ++ +K + I+ ++L+N + A+ +F+ M K N VT
Sbjct: 339 GKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 503 WSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMC 562
++ +I G+ + LFR+M + N V + +++ +G ++F M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 563 RELNFVPSMKHYACMVDLLARAGNLKEAL---DFIDKMPVQPGVSVFGAYLHG 612
+ P + Y+ ++D L + G L++AL +++ K ++P + + + G
Sbjct: 458 SD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 131/298 (43%), Gaps = 29/298 (9%)
Query: 49 KFHASLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPS----PNLHSFKAMLR------ 98
K A ++++ T ++ ++ + A LF + + PN+ ++ +++R
Sbjct: 250 KIEADVVIY-----TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 99 -WYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK-SG 156
W + L SD++ ++V FS ++ A + +V+A +L+ +IK S
Sbjct: 305 RWSDASRLLSDMIE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 157 PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER----NVVSWTSMFVAYVQNDCAVEGLR 212
D F + L++ + + A+ +F+ + + NVV++ ++ + + EG+
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 213 LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYV 272
LF M + + GN T +L+ + G + + +V G+ + + LL+
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 273 KCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
K G + A VF+ + S E D+ ++ MI G + G +LF + G+ PN
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 122/582 (20%), Positives = 228/582 (39%), Gaps = 83/582 (14%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLP----SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRY 118
T ++ + G + A +LF + +PN+ +F ++ + + + F
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE-KMV 322
Query: 119 TLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVC 177
G L+ +SI++K + + + A + + K G P + V N L+D++ + G +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 178 SARKVFDEIAERNVV----SWTSMFVAYVQNDCAVEGLRLFNRMRE-GF-VDGNDFT--- 228
A ++ D + + + ++ ++ Y +N A RL M GF V+ FT
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 229 ---------------VGSLVTACTKLG-----SLHQGKWVHGYVVKS----------GIH 258
VG ++ G +L G HG K+ G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
V++ + +LL+ + G + +A ++ E+L +D VS+ +I G + +A
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 319 FTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAK 378
+ G+ P+ ++ CGLF+ V A I +
Sbjct: 563 LDEMVKRGLKPDNYTYS---------------------ILICGLFNMNKVEEA-IQFWDD 600
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
C + DV +++ I GC ++ E E F M S++ P V
Sbjct: 601 CK---------RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-- 496
+ + C S G L + + +K +S + T+L+ + + A+++F+ M
Sbjct: 652 IRAYCRS-GRLSMALELRE-DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709
Query: 497 --EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
E N ++A+I GYG G V L R+M + PN++ +T ++ + G V E
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 555 SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
SRL + M RE VP Y + + G + EA D+
Sbjct: 770 SRLLNEM-REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 112/247 (45%), Gaps = 6/247 (2%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P+ +++ ++ F N + + F+ + G D+ +S+++ C + +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 147 RLHCHVI-KSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
++ K+ + V N L+ AY + G + A ++ +++ + + ++ + + ++
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 206 CAV----EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
+ E LF MR ++ N F +L+ KLG + + + + + +H N
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
T ++ Y + G++ +A ++ +EM D +++ I GY ++G L+A + +
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 322 RNWAGIL 328
N+A I+
Sbjct: 811 ENYAAII 817
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 172/433 (39%), Gaps = 21/433 (4%)
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
VV G+ + +L T+ +N + K G + +A K+F +M + ++V++ +I G G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 312 PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA 371
+A G+ P + + K G N V N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVV----SWNSFISGCAQSGSAYEALEMFQRMRSES 427
LID + + ++ A + + V K + ++N+ I G ++G A A + + M S
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG--TALLNFYAKCGD- 484
F+ + C+ L + S F + L + S G T L++ K G
Sbjct: 431 FNVNQGSFTSVICLLCSHL----MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 485 AKSARMVFDGMGEKNAV---TWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
+K+ + F + + V T +A++ G G + + +++L C + V + ++
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID---KMP 598
++ C + E M + P Y+ ++ L ++EA+ F D +
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIRRML--ELHPDQACYYVLVSNLYASDGRWGMV 656
+ P V + + GC E G+ M+ + P+ Y L+ Y GR M
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI-RAYCRSGRLSMA 664
Query: 657 KQVREMIKQRGLN 669
++RE +K +G++
Sbjct: 665 LELREDMKHKGIS 677
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARY----------VFETTVQKDVVSWNSFISG 406
V+ CGL D+ R A+ D A L D V+ T ++D G
Sbjct: 159 VLPCGLRDS---RVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRD---------G 206
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
C Y AL++F + ++ P + + S + A AF + VS
Sbjct: 207 C------YLALDVFPVLANKGMFPSKTTCNILLTSL---VRANEFQKCCEAFDVVCKGVS 257
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIAL 522
+Y+ T +N + K G + A +F M E N VT++ +I G GM G +
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLA 582
M++ EP + ++ ++ + + +G+ + M ++ F P++ Y ++D
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFI 376
Query: 583 RAGNLKEALDFIDKMPVQPGVSV----FGAYLHGCGLHSEFELGEVAIRRMLEL 632
AG+L +A++ D M V G+S+ + + G + + + E ++ ML +
Sbjct: 377 EAGSLNKAIEIKDLM-VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 122/582 (20%), Positives = 228/582 (39%), Gaps = 83/582 (14%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLP----SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRY 118
T ++ + G + A +LF + +PN+ +F ++ + + + F
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE-KMV 322
Query: 119 TLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVC 177
G L+ +SI++K + + + A + + K G P + V N L+D++ + G +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 178 SARKVFDEIAERNVV----SWTSMFVAYVQNDCAVEGLRLFNRMRE-GF-VDGNDFT--- 228
A ++ D + + + ++ ++ Y +N A RL M GF V+ FT
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 229 ---------------VGSLVTACTKLG-----SLHQGKWVHGYVVKS----------GIH 258
VG ++ G +L G HG K+ G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
V++ + +LL+ + G + +A ++ E+L +D VS+ +I G + +A
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 319 FTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAK 378
+ G+ P+ ++ CGLF+ V A I +
Sbjct: 563 LDEMVKRGLKPDNYTYS---------------------ILICGLFNMNKVEEA-IQFWDD 600
Query: 379 CHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVG 438
C + DV +++ I GC ++ E E F M S++ P V
Sbjct: 601 CK---------RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 439 VLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG-- 496
+ + C S G L + + +K +S + T+L+ + + A+++F+ M
Sbjct: 652 IRAYCRS-GRLSMALELRE-DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709
Query: 497 --EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
E N ++A+I GYG G V L R+M + PN++ +T ++ + G V E
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 555 SRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDK 596
SRL + M RE VP Y + + G + EA D+
Sbjct: 770 SRLLNEM-REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 112/247 (45%), Gaps = 6/247 (2%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P+ +++ ++ F N + + F+ + G D+ +S+++ C + +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 147 RLHCHVI-KSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
++ K+ + V N L+ AY + G + A ++ +++ + + ++ + + ++
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 206 CAV----EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
+ E LF MR ++ N F +L+ KLG + + + + + +H N
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
T ++ Y + G++ +A ++ +EM D +++ I GY ++G L+A + +
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 322 RNWAGIL 328
N+A I+
Sbjct: 811 ENYAAII 817
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 172/433 (39%), Gaps = 21/433 (4%)
Query: 252 VVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGH 311
VV G+ + +L T+ +N + K G + +A K+F +M + ++V++ +I G G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 312 PLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNA 371
+A G+ P + + K G N V N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 372 LIDMYAKCHLVSDARYVFETTVQKDVV----SWNSFISGCAQSGSAYEALEMFQRMRSES 427
LID + + ++ A + + V K + ++N+ I G ++G A A + + M S
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 428 FSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG--TALLNFYAKCGD- 484
F+ + C+ L + S F + L + S G T L++ K G
Sbjct: 431 FNVNQGSFTSVICLLCSHL----MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 485 AKSARMVFDGMGEKNAV---TWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
+K+ + F + + V T +A++ G G + + +++L C + V + ++
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFID---KMP 598
++ C + E M + P Y+ ++ L ++EA+ F D +
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIRRML--ELHPDQACYYVLVSNLYASDGRWGMV 656
+ P V + + GC E G+ M+ + P+ Y L+ Y GR M
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI-RAYCRSGRLSMA 664
Query: 657 KQVREMIKQRGLN 669
++RE +K +G++
Sbjct: 665 LELREDMKHKGIS 677
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARY----------VFETTVQKDVVSWNSFISG 406
V+ CGL D+ R A+ D A L D V+ T ++D G
Sbjct: 159 VLPCGLRDS---RVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRD---------G 206
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
C Y AL++F + ++ P + + S + A AF + VS
Sbjct: 207 C------YLALDVFPVLANKGMFPSKTTCNILLTSL---VRANEFQKCCEAFDVVCKGVS 257
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIAL 522
+Y+ T +N + K G + A +F M E N VT++ +I G GM G +
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLA 582
M++ EP + ++ ++ + + +G+ + M ++ F P++ Y ++D
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFI 376
Query: 583 RAGNLKEALDFIDKMPVQPGVSV----FGAYLHGCGLHSEFELGEVAIRRMLEL 632
AG+L +A++ D M V G+S+ + + G + + + E ++ ML +
Sbjct: 377 EAGSLNKAIEIKDLM-VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 190/455 (41%), Gaps = 54/455 (11%)
Query: 200 AYVQNDCAVEGLRLFNRMRE-GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
+YVQ+ + FN M + GFV G++ L+T S +Q W KS +
Sbjct: 103 SYVQSQSLNLSISYFNEMVDNGFVPGSN-CFNYLLTFVVGSSSFNQW-WSFFNENKSKVV 160
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD---ELDLVSWTAMIVGYSQRGHPLKA 315
++ + L+ C + G+ K FD ++ + ++V +T +I G ++G KA
Sbjct: 161 LDVYSFGILIK---GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 316 LELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDM 375
+LF + G++ N G ++ + + G+F N N +++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 376 YAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPP 431
K DA VF+ ++ ++V++N+ I G + EA ++ +M+S+ +P
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 432 DAV--TVVGVLSACASLG-ALPLGSSIHAFALKDGLVSCSIYVG---------------- 472
T++ LG AL L + + L LV+ +I V
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 473 --------------TALLNFYAKCGDAKSARMVFDGMGEKNAV----TWSAMISGYGMQG 514
T L++ +A+ + + A + M E V T+S +I G+ ++G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 515 DGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHY 574
+ LF+ M+++ CEPNEV++ +++ G +L M E P++ Y
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM-EEKELAPNVASY 516
Query: 575 ACMVDLLARAGNLKEALDFIDKM---PVQPGVSVF 606
M+++L + KEA ++KM + P S+
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL 551
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 145/371 (39%), Gaps = 28/371 (7%)
Query: 99 WYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPS 158
W F N S VV D+ F I++K C E ++ ++ L + + G S
Sbjct: 149 WSFFNENKSKVV-------------LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFS 195
Query: 159 DGFVL-NGLVDAYSKCGHVCSARKVFDEIAERNVV----SWTSMFVAYVQNDCAVEGLRL 213
V+ L+D K G + A+ +F E+ + +V ++T + +N +G +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
+ +M+E V N +T ++ K G V + + G+ N +L+ +
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
+ +A KV D+M + +L+++ +I G+ G KAL L D G+ P+
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF---- 389
+ + + G+ + LID +A+ + A +
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
E + DV +++ I G G EA +F+ M ++ P + + +L C
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE---- 491
Query: 450 PLGSSIHAFAL 460
GSS A L
Sbjct: 492 --GSSYRALKL 500
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 54/285 (18%)
Query: 396 DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
DV S+ I GC ++G ++ ++ + FSP
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP------------------------- 196
Query: 456 HAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE----KNAVTWSAMISGYG 511
++ + T L++ K G+ + A+ +F MG+ N T++ +I+G
Sbjct: 197 ------------NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 512 MQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSM 571
G ++ M ++ PN + V+ G + ++F M RE ++
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCNI 303
Query: 572 KHYACMVDLLARAGNLKEALDFIDKMP---VQPGVSVFGAYLHG-CGLHSEFELGE-VAI 626
Y ++ L R L EA +D+M + P + + + G CG+ +LG+ +++
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG---KLGKALSL 360
Query: 627 RRMLE---LHPDQACYYVLVSNLYASDGRWGMVKQVREMIKQRGL 668
R L+ L P Y +LVS G K V+EM ++RG+
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EERGI 404
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 193/495 (38%), Gaps = 95/495 (19%)
Query: 213 LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQG-KWVHGYVVKSGIHVNSFLATSLLNMY 271
LF+ MR+ + + +T +L+T+ K G W+ + + + + L ++L+ +
Sbjct: 177 LFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQK-MEQDRVSGDLVLYSNLIELS 235
Query: 272 VKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNX 331
+ D A +F + S DLV++ +MI Y + +A L + N AG+LPN
Sbjct: 236 RRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 295
Query: 332 XXXXXXXXXXXXXXX--XXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF 389
+ + V C L D T N +ID+Y + +V +A +F
Sbjct: 296 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL-DLTTC-NIMIDVYGQLDMVKEADRLF 353
Query: 390 ----ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACAS 445
+ ++ +VVS+N+ + Y E+F
Sbjct: 354 WSLRKMDIEPNVVSYNTILR-------VYGEAELF------------------------- 381
Query: 446 LGALPLGSSIHAFAL---KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG----EK 498
G +IH F L KD + ++ ++ Y K + + A + M E
Sbjct: 382 ------GEAIHLFRLMQRKD--IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 499 NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLF 558
NA+T+S +IS +G G + LF+ + E ++V++ +++ A G++G RL
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 559 HMMCRELNF------------------------------VPSMKHYACMVDLLARAGNLK 588
H + N V + + CM++L +R
Sbjct: 494 HELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYV 553
Query: 589 EALDFIDKMPVQ---PGVSVFGAYLHGCGLHSEFELGEVAIRRMLE---LHPDQACYYVL 642
++ +KM P +V L+ G EFE + R M E + PD+ + +L
Sbjct: 554 NVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Query: 643 VSNLYASDGRWGMVK 657
+LY+S + MV+
Sbjct: 614 --SLYSSKKDFEMVE 626
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 123/605 (20%), Positives = 224/605 (37%), Gaps = 112/605 (18%)
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSAR 180
+ D+ ++ +L A S +A L + + GPS V N ++D + K G
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR----- 260
Query: 181 KVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLG 240
SW + L + + MR + ++FT ++++AC + G
Sbjct: 261 ------------SWRKI-------------LGVLDEMRSKGLKFDEFTCSTVLSACAREG 295
Query: 241 SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWT 300
L + K + G + +LL ++ K G +A V EM + D V++
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 301 AMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKC 360
++ Y + G +A + G++PN + L + +
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 361 GLFDNTPVRNALIDMYAK-----------CHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
G NT NA++ + K C + S+ + +WN+ ++ C
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG-------CSPNRATWNTMLALCGN 468
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
G +F+ M+S F PD T ++SA G+ S ++ + G +C +
Sbjct: 469 KGMDKFVNRVFREMKSCGFE-PDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC-V 526
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVG------- 518
ALLN A+ GD +S V M K ++S M+ Y G+ +G
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 519 --------SIALFRDML--------------------KEECEPNEVVFTSVLAACSHSGM 550
S L R +L K +P+ V+F S+L+ + + M
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 551 VGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAG---NLKEALDFIDKMPVQPGVSVFG 607
+ + + RE P + Y ++D+ R G +E L ++K ++P + +
Sbjct: 647 YDQAEGILESI-REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 608 AYLHG-C--GLHSEFELGEVAIRRMLEL-----HPDQACYYVLVSNLYASDGRWGMVKQV 659
+ G C GL E A+R + E+ P Y VS A GM ++
Sbjct: 706 TVIKGFCRRGLMQE------AVRMLSEMTERGIRPCIFTYNTFVSGYTA----MGMFAEI 755
Query: 660 REMIK 664
++I+
Sbjct: 756 EDVIE 760
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/514 (19%), Positives = 197/514 (38%), Gaps = 30/514 (5%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPS----PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRY 118
+ +LS A G LR A+ F L S P ++ A+L+ + ++++ +S
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 119 TLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVC 177
D V ++ ++ A +AA + + K G + ++DAY K G
Sbjct: 345 N-SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 178 SARKVFDEIAERNVVSWTSMFVAYV----QNDCAVEGLRLFNRMREGFVDGNDFTVGSLV 233
A K+F + E V T + A + + + E +++ M+ N T +++
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 234 TACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDE 293
C G V + G + +L++ Y +CG DA K++ EM +
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 294 LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLL 353
+ ++ A++ +++G + +D G P +
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 354 HGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK-----DVVSWNSFISGCA 408
+ + +F + + L+ KC ++ + F T +K D+V +NS +S
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAF-TLFKKHGYKPDMVIFNSMLSIFT 642
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLG----ALPLGSSIHAFALKDGL 464
++ +A + + +R + SP D VT ++ G A + ++ LK L
Sbjct: 643 RNNMYDQAEGILESIREDGLSP-DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 465 VSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNA----VTWSAMISGYGMQGDGVGSI 520
VS + ++ + + G + A + M E+ T++ +SGY G
Sbjct: 702 VSYN-----TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE 756
Query: 521 ALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEG 554
+ M K +C PNE+ F V+ +G E
Sbjct: 757 DVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 15/317 (4%)
Query: 128 VFSIVLKACSELRDVVQAARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSARKVFDE 185
++S + K + D A L H++KS P+ F+ N L+ + CG + R++FD
Sbjct: 90 IYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFI-NRLLLMHVSCGRLDITRQMFDR 148
Query: 186 IAERNVVSWTSMFVAYVQ----NDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGS 241
+ R+ SW +F+ ++ D A + + ++G + +G ++ AC +
Sbjct: 149 MPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRD 208
Query: 242 LHQGKWVHGYVVKSGI--HVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSW 299
GK VH K G +S+L+ SL+ Y + + DA V ++ ++ V+W
Sbjct: 209 FELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNAN----TVAW 264
Query: 300 TAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXX-XXXXXXMGMLLHGLVV 358
A + + G + + F + GI N G +H +
Sbjct: 265 AAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAI 324
Query: 359 KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVS-WNSFISGCAQSGSAYEAL 417
K G + +R LI+MY K V DA VF+++ + VS WN+ ++ Q+G EA+
Sbjct: 325 KLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAI 384
Query: 418 EMFQRMRSESFSPPDAV 434
++ +M++ D +
Sbjct: 385 KLLYQMKATGIKAHDTL 401
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 10/272 (3%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPSPNLHSFK-AMLRWYFLNNLHSDVVSFYHLTRYTL- 120
+LL ++ S G L R++FD +P + HS+ L + + F + +++
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 121 -GFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG---PSDGFVLNGLVDAYSKCGHV 176
F + VLKAC+ +RD ++H K G D ++ L+ Y + +
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCL 246
Query: 177 CSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTAC 236
A V +++ N V+W + + E +R F M + N +++ AC
Sbjct: 247 EDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKAC 306
Query: 237 TKLGSL-HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELD 295
+ + G+ VH +K G + + L+ MY K G + DA KVF +S DE
Sbjct: 307 SWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFK---SSKDETS 363
Query: 296 LVSWTAMIVGYSQRGHPLKALELFTDRNWAGI 327
+ W AM+ Y Q G ++A++L GI
Sbjct: 364 VSCWNAMVASYMQNGIYIEAIKLLYQMKATGI 395
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 6/244 (2%)
Query: 370 NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEA----LEMFQRMRS 425
N L+ M+ C + R +F+ +D SW GC + G +A + M + +
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS-IYVGTALLNFYAKCGD 484
+F P + + VL ACA + LG +HA K G + Y+ +L+ FY +
Sbjct: 187 GAFKIPSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRC 245
Query: 485 AKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAA 544
+ A +V + N V W+A ++ +G+ I F +M + N VF++VL A
Sbjct: 246 LEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKA 305
Query: 545 CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS 604
CS G + H +L F ++++ + G +K+A + VS
Sbjct: 306 CSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVS 365
Query: 605 VFGA 608
+ A
Sbjct: 366 CWNA 369
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 18/313 (5%)
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
GN+ L + + +++KS I LL M+V CG + R++
Sbjct: 86 GNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQM 145
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD-----RNWAGILPNXXXXXXXX 338
FD M D SW + +G + G A LF + A +P+
Sbjct: 146 FDRM----PHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLK 201
Query: 339 XXXXXXXXXXMGMLLHGLVVKCGLFD--NTPVRNALIDMYAKCHLVSDARYVFETTVQKD 396
+G +H L K G D ++ + +LI Y + + DA V +
Sbjct: 202 ACAMIRDFE-LGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNAN 260
Query: 397 VVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA--SLGALPLGSS 454
V+W + ++ + G E + F M + +V VL AC+ S G G
Sbjct: 261 TVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSV-FSNVLKACSWVSDGGRS-GQQ 318
Query: 455 IHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVT-WSAMISGYGMQ 513
+HA A+K G S + L+ Y K G K A VF ++ +V+ W+AM++ Y
Sbjct: 319 VHANAIKLGFES-DCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQN 377
Query: 514 GDGVGSIALFRDM 526
G + +I L M
Sbjct: 378 GIYIEAIKLLYQM 390
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 178/425 (41%), Gaps = 66/425 (15%)
Query: 115 LTRYTLGFFHDLVV---------FSIVLKACSELRDVVQAAR-------LHCHVIKSG-P 157
+T LGF D + F + ++ C L D + + ++ +G P
Sbjct: 178 ITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFP 237
Query: 158 SDGFVLNGLVDAYSKCGHVCSARKVFDEIAERN----VVSWTSMFVAYVQNDCAVEGLRL 213
+ +V N L++ + K G++ A+KVFDEI +R+ VVS+ ++ Y + EG RL
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 214 FNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
++M + + FT +L+ A K + + + K G+ N + T+L++ + +
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
G+I ++ + +ML+ + D+V + ++ G+ + G +L RN
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG------DLVAARN---------- 401
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDA----RYVF 389
++ G++ + GL + LID + + V A + +
Sbjct: 402 ------------------IVDGMIRR-GLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
+ ++ D V +++ + G + G +A + M PD VT ++ A G
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK-PDDVTYTMMMDAFCKKGDA 501
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE----KNAVTWSA 505
G + DG V S+ LLN K G K+A M+ D M + +T++
Sbjct: 502 QTGFKLLKEMQSDGHVP-SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNT 560
Query: 506 MISGY 510
++ G+
Sbjct: 561 LLEGH 565
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 116/266 (43%), Gaps = 19/266 (7%)
Query: 415 EALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK--DGLVSCSIYVG 472
+A++ F+ R F P + G + + L +I F ++ D ++YV
Sbjct: 188 DAIQCFRLSRKHRFDVP----IRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEKN----AVTWSAMISGYGMQGDGVGSIALFRDMLK 528
L+N + K G+ A+ VFD + +++ V+++ +I+GY G+ L M K
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 529 EECEPNEVVFTSVLAA-CSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGN- 586
P+ +++++ A C + M G LF MC+ +P+ + ++ +R G
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHG-LFDEMCKR-GLIPNDVIFTTLIHGHSRNGEI 361
Query: 587 --LKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVL 642
+KE+ + +QP + ++ ++G + + + M+ L PD+ Y L
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 643 VSNLYASDGRWGMVKQVREMIKQRGL 668
+ + G ++R+ + Q G+
Sbjct: 422 IDG-FCRGGDVETALEIRKEMDQNGI 446
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 105/504 (20%), Positives = 197/504 (39%), Gaps = 55/504 (10%)
Query: 209 EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLL 268
E +++ M E V N +T +V KLG++ + +V++G+ + F TSL+
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 269 NMYVKCGDIGDARKVFDEMLTS----------------------DDELDLV--------- 297
Y + D+ A KVF+EM D+ +DL
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 298 ----SWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLL 353
++T +I +AL L + GI PN L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 354 HGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE----TTVQKDVVSWNSFISGCAQ 409
G +++ GL N NALI+ Y K ++ DA V E + + ++N I G +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
S + ++A+ + +M E PD VT ++ G + + GLV
Sbjct: 441 S-NVHKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP-DQ 497
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRD 525
+ T++++ K + A +FD + +K N V ++A+I GY G + +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 526 MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAG 585
ML + C PN + F +++ G + E + L M + + P++ ++ L + G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK-IGLQPTVSTDTILIHRLLKDG 616
Query: 586 NLKEALDFIDKM---PVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYY 640
+ A +M +P + ++ E + +M E + PD Y
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 641 VLVS---NLYASDGRWGMVKQVRE 661
L+ +L ++ + ++K++R+
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRD 700
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 186/449 (41%), Gaps = 45/449 (10%)
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
+L+ + + G + + K V+ +++ + N + ++N Y K G++ +A + +++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
+ + D ++T++I+GY QR A ++F + G N
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH------------- 293
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
L+HGL V + + +D++ K + D F T V ++ I
Sbjct: 294 --LIHGLCVARRI-------DEAMDLFVK--MKDDE--CFPT-----VRTYTVLIKSLCG 335
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSI 469
S EAL + + M P V + S C+ + L+ GL+ ++
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC-KFEKARELLGQMLEKGLMP-NV 393
Query: 470 YVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRD 525
AL+N Y K G + A V + M + N T++ +I GY + + ++ +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNK 452
Query: 526 MLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAG 585
ML+ + P+ V + S++ SG RL +M + VP Y M+D L ++
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM-NDRGLVPDQWTYTSMIDSLCKSK 511
Query: 586 NLKEALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELH--PDQACYY 640
++EA D D + V P V ++ A + G + + + + +ML + P+ +
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 641 VLVSNLYASDGRWGMVKQVREMIKQRGLN 669
L+ L A DG+ + E + + GL
Sbjct: 572 ALIHGLCA-DGKLKEATLLEEKMVKIGLQ 599
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 139/662 (20%), Positives = 258/662 (38%), Gaps = 98/662 (14%)
Query: 35 LYLSPICKNIDTVKKFHAS--LIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPS----P 88
LY+ +C+ ++ ++F LI+ + LL+ A FG + ++++ + P
Sbjct: 160 LYVLDLCRKMNKDERFELKYKLIIGCY---NTLLNSLARFGLVDEMKQVYMEMLEDKVCP 216
Query: 89 NLHSFKAMLRWYF-LNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAAR 147
N++++ M+ Y L N+ + Y G D ++ ++ + +D+ A +
Sbjct: 217 NIYTYNKMVNGYCKLGNVEE--ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 148 LHCHVIKSGPSDGFVLNGLVDAYSKCGH-VCSAR----------KVFDEIAERNVVSWTS 196
V P G N + AY+ H +C AR K+ D+ V ++T
Sbjct: 275 ----VFNEMPLKGCRRNEV--AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 197 MFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSG 256
+ + ++ E L L M E + N T L+ + + + + G +++ G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 257 IHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKAL 316
+ N +L+N Y K G I DA V + M + + ++ +I GY + + KA+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAM 447
Query: 317 ELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMY 376
+ +LP+ L L+ GL + ++ID
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 377 AKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPD 432
K V +A +F++ QK +VV + + I G ++G EA M ++M S++ P+
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN-CLPN 566
Query: 433 AVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVF 492
++T ++ + G L + + +K GL ++ T L++ K GD A F
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP-TVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 493 DGM---GEK-------------------------------NAV-----TWSAMISGYGMQ 513
M G K N V T+S++I GYG
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 514 GDGVGSIALFRDMLKEECEPNEVVFTSVLA----------------ACSHSGMVGEGSRL 557
G + + + M CEP++ F S++ C+ S M+ E +
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM-EFDTV 744
Query: 558 FHMMCR--ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS----VFGAYLH 611
++ + E + P+ K Y ++ + GNL+ A D M G+S VF A L
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 612 GC 613
C
Sbjct: 805 CC 806
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/495 (21%), Positives = 189/495 (38%), Gaps = 51/495 (10%)
Query: 75 LRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDV-VSFYHLTRYTLGFFHDLVVFSIVL 133
L +R+L SPN ++ +++ Y +N+H + V L R L D+V ++ ++
Sbjct: 418 LMESRKL-----SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLP---DVVTYNSLI 469
Query: 134 KACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER--- 189
+ A RL + G D + ++D+ K V A +FD + ++
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 190 -NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWV 248
NVV +T++ Y + E + +M N T +L+ G L + +
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 249 HGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQ 308
+VK G+ T L++ +K GD A F +ML+S + D ++T I Y +
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 309 RGHPLKALELFTDRNWAGILPNX---------------------XXXXXXXXXXXXXXXX 347
G L A ++ G+ P+
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Query: 348 XMGMLLHGLVVKCGLFDNT-PVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISG 406
+ ++ H L +K G + P A+ +M +V + E +V + S+ I G
Sbjct: 710 FLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG 769
Query: 407 CAQSGSAYEALEMFQRM-RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDG-- 463
+ G+ A ++F M R+E SP + V +LS C L + + + G
Sbjct: 770 ICEVGNLRVAEKVFDHMQRNEGISPSELV-FNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 464 --LVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE----KNAVTWSAMISGYGMQGDGV 517
L SC + + Y K G+ + VF + + ++ + W +I G G QG
Sbjct: 829 PQLESCKVLI----CGLYKK-GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Query: 518 GSIALFRDMLKEECE 532
LF M K C+
Sbjct: 884 AFYELFNVMEKNGCK 898
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 218/538 (40%), Gaps = 33/538 (6%)
Query: 141 DVVQAARLHCHVIKSGPSDGFV-----LNGL-VDAYSKCGHVCSARKVFDEIAERNVVSW 194
+V +A H V++ G G V L GL VD + S V D NVV++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL--VLDCGPAPNVVTF 289
Query: 195 TSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK 254
++ + + LF M + ++ + +L+ K G L G + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
G+ ++ + +S +++YVK GD+ A V+ ML ++V++T +I G Q G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALID 374
A ++ G+ P+ G L+ ++K G + + L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 375 MYAKCHLVSDA-RY---VFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSP 430
+K L+ A R+ + +++ +VV +NS I G + EAL++F+ M
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK- 528
Query: 431 PDAVTVVGVLSACASLGAL------PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGD 484
PD T V+ A +G + ++ +S I V +++ KC
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHR 587
Query: 485 AKSARMVF----DGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTS 540
+ A F +G E + VT++ MI GY + +F + PN V T
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 541 VL-AACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP- 598
++ C ++ M G R+F +M E P+ Y C++D +++ +++ + ++M
Sbjct: 648 LIHVLCKNNDMDG-AIRMFSIMA-EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 599 --VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSNLYASDGR 652
+ P + + + G + + ++ L PD Y +L+ Y GR
Sbjct: 706 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG-YCKVGR 762
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 113/533 (21%), Positives = 208/533 (39%), Gaps = 44/533 (8%)
Query: 86 PSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQA 145
P P++ F +L N V+S + TLG HDL +SI + + A
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 146 ARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQN 204
+ ++K G D L+ L++ Y + A + D++ E T F +
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH- 196
Query: 205 DCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA 264
GL L N+ E +LV +V+ G +
Sbjct: 197 -----GLFLHNKASEAV---------ALVDQ----------------MVQRGCQPDLVTY 226
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
+++N K GDI A + +M E D+V + +I G + H AL LFT+ +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
GI P+ L +++ + N +ALID + K + +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 385 ARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
A +++ +++ D+ +++S I+G EA MF+ M S+ P+ VT ++
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYSTLI 405
Query: 441 SACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE--- 497
+ G + + GLV ++ T + F+ + D +A+MVF M
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF-QARDCDNAQMVFKQMVSVGV 464
Query: 498 -KNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSR 556
N +T++ ++ G G ++ +F + + EP+ + ++ +G V +G
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 557 LFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAY 609
LF + + P++ Y M+ R G+ +EA + KM + G Y
Sbjct: 525 LFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/454 (19%), Positives = 186/454 (40%), Gaps = 18/454 (3%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P++ + ++L Y + SD V+ +G+ D F+ ++ +A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVD-QMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 147 RLHCHVIKSGPSDGFVLNG-LVDAYSKCGHVCSARKVFDEIA----ERNVVSWTSMFVAY 201
L +++ G V G +V+ K G + A + ++ E +VV + ++
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 202 VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
+ + L LF M + + FT SL++ G + +++ I+ N
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
++L++ +VK G + +A K++DEM+ + D+ +++++I G+ +A +F
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
PN GM L + + GL NT LI + +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 382 VSDARYVFETT----VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVV 437
+A+ VF+ V +++++N + G ++G +A+ +F+ ++ + PD T
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME-PDIYTYN 507
Query: 438 GVLSACASLGALPLGSSIHA-FALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMG 496
++ G + G + +LK VS ++ +++ + + G + A + M
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKG--VSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 497 EK----NAVTWSAMISGYGMQGDGVGSIALFRDM 526
E N+ T++ +I GD S L ++M
Sbjct: 566 EDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 115/284 (40%), Gaps = 14/284 (4%)
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQ----KDVVSWNSFISGCAQSGS 412
++K G + ++L++ Y +SDA + + V+ D ++ + I G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
A EA+ + +M PD VT V++ G + L S+ ++ G + + +
Sbjct: 204 ASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLK-KMEKGKIEADVVIY 261
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
+++ K A +F M K + T+S++IS G + L DM++
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
+ PN V F++++ A G + E +L+ M + + P + Y+ +++ L
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLD 380
Query: 589 EALDFIDKMPVQ---PGVSVFGAYLHGCGLHSEFELGEVAIRRM 629
EA + M + P V + + G E G R M
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/565 (19%), Positives = 229/565 (40%), Gaps = 65/565 (11%)
Query: 65 LLSLYASFGFLRHARRLFDHLP----SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTL 120
++ Y G + AR F+ + +P + +++ Y + + +S +
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE- 373
Query: 121 GFFHDLVVFSIVLKACS-----ELRD--VVQAARLHCHVIKSGPSDGFVLNGLVDAYSKC 173
G LV +S+++ S E D +A R+H + + + ++ A+ +
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL------NASIYGKIIYAHCQT 427
Query: 174 GHVCSARKVFDEIAERNVVS----WTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTV 229
++ A + E+ E + + + +M Y +GL +F R++E T
Sbjct: 428 CNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTY 487
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
G L+ TK+G + + V + + G+ N + ++N +VK D +A VF++M+
Sbjct: 488 GCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK 547
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
+ D++ + +I + G+ +A++ + P
Sbjct: 548 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP------------- 594
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQ 409
++HG + + V DM +C V V ++N I+G +
Sbjct: 595 --IIHGYAKSGDMRRSLEV----FDMMRRCGCVP------------TVHTFNGLINGLVE 636
Query: 410 SGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFA-LKDGLVSCS 468
+A+E+ M S + T ++ AS+G G + F L++ +
Sbjct: 637 KRQMEKAVEILDEMTLAGVSANEH-TYTKIMQGYASVG--DTGKAFEYFTRLQNEGLDVD 693
Query: 469 IYVGTALLNFYAKCGDAKSARMVFDGMG----EKNAVTWSAMISGYGMQGDGVGSIALFR 524
I+ ALL K G +SA V M +N+ ++ +I G+ +GD + L +
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 525 DMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARA 584
M KE +P+ +TS ++ACS +G + ++ M L P++K Y ++ ARA
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARA 812
Query: 585 GNLKEALDFIDKMP---VQPGVSVF 606
++AL ++M ++P +V+
Sbjct: 813 SLPEKALSCYEEMKAMGIKPDKAVY 837
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/560 (20%), Positives = 218/560 (38%), Gaps = 60/560 (10%)
Query: 53 SLIVHGFPGDTKLLSLYASFGFLRHARRLFDHLPS----PNLHSFKAMLRWYFLNNLHSD 108
++ V GF L S+ G L A + F + P S +L + D
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 245
Query: 109 VVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLV 167
V F+ G + ++I++ + DV A L + G D N ++
Sbjct: 246 VKRFFK-DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 168 DAYSKCGH----VCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVD 223
D + K G VC ++ D E +V+++ ++ + + GL + M+ +
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 224 GNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKV 283
N + +LV A K G + Q + + + G+ N + TSL++ K G++ DA ++
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 284 FDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXX 343
+EML E ++V++TA+I G +A ELF + AG++PN
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 344 XXXXXMG---------------MLLHGLVV--------------------KCGLFDNTPV 368
+LL+G + +CG+ N+ +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 369 RNALIDMYAKC-------HLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
L+D Y K HL+ + + E ++ VV++ I G ++ +A++ F
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMK---ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
R+ ++ +A ++ + +++ ++ GLV T+L++ K
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP-DRTAYTSLMDGNFK 660
Query: 482 CGDAKSARMVFDGMGE----KNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVV 537
G+ A + D M E + + +++++ G + + +M+ E P+EV+
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720
Query: 538 FTSVLAACSHSGMVGEGSRL 557
SVL G + E L
Sbjct: 721 CISVLKKHYELGCIDEAVEL 740
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/498 (19%), Positives = 200/498 (40%), Gaps = 22/498 (4%)
Query: 164 NGLVDAYSKCGHVCSARKVFDEI---AERNVVSWTSMFVAYVQNDCAVEGLR-LFNRMRE 219
NGL+ ++K G ++ F ++ R V ++ + + + VE R LF M+
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 220 GFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGD 279
+ + T S++ K+G L + + +L+N + K G +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 280 ARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXX 339
+ + EM + + ++VS++ ++ + + G +A++ + D G++PN
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 340 XXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF----ETTVQK 395
L +++ G+ N ALID + +A +F V
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 396 DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSI 455
++ S+N+ I G ++ + ALE+ ++ P D + + SL + + +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKP-DLLLYGTFIWGLCSLEKIE-AAKV 528
Query: 456 HAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN----AVTWSAMISGYG 511
+K+ + + + T L++ Y K G+ + D M E + VT+ +I G
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 512 MQGDGVGSIALFRDMLKE-ECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPS 570
++ F + + + N +FT+++ V + LF M ++ VP
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK-GLVPD 647
Query: 571 MKHYACMVDLLARAGNLKEALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIR 627
Y ++D + GN+ EAL DKM ++ + + + + G ++ + +
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 628 RML--ELHPDQA-CYYVL 642
M+ +HPD+ C VL
Sbjct: 708 EMIGEGIHPDEVLCISVL 725
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 411 GSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL---VSC 467
G EA++ F +M+ P + G+L A LG + F KD +
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPK-TRSCNGLLHRFAKLGK---TDDVKRF-FKDMIGAGARP 260
Query: 468 SIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALF 523
+++ +++ K GD ++AR +F+ M + + VT+++MI G+G G ++ F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 524 RDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLAR 583
+M CEP+ + + +++ G + G + M + P++ Y+ +VD +
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNGLKPNVVSYSTLVDAFCK 379
Query: 584 AGNLKEALDF 593
G +++A+ F
Sbjct: 380 EGMMQQAIKF 389
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 178/444 (40%), Gaps = 23/444 (5%)
Query: 118 YTLGFFHDLVVFSIVLKA-CSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHV 176
+ LG+ D + FS ++ C E R A + V D ++ L++ G V
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
Query: 177 CSARKVFDEIAER----NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSL 232
A + D + E + V++ + ++ + L LF +M E + + +
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 233 VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD 292
+ + K GS + + GI + +SL+ G D K+ EM+ +
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 293 ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGML 352
D+V+++A+I + + G L+A EL+ + GI P+
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCA 408
+ L+V G + + LI+ Y K V D +F K + +++N+ + G
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 409 QSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCS 468
QSG A E+FQ M S PP VT +L G L A + + +
Sbjct: 432 QSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELN-----KALEIFEKMQKSR 485
Query: 469 IYVGTALLN--FYAKCGDAK--SARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSI 520
+ +G + N + C +K A +F + +K + VT++ MI G +G +
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 521 ALFRDMLKEECEPNEVVFTSVLAA 544
LFR M ++ C P++ + ++ A
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRA 569
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 152/376 (40%), Gaps = 14/376 (3%)
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
V G K G ++ ++L+N + G + +A + D M+ DLV+ + +I G
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
+G +AL L G P+ + + L + + + +
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 368 VRNALIDMYAKCHLVSDARYVFETT----VQKDVVSWNSFISGCAQSGSAYEALEMFQRM 423
+ +ID K DA +F ++ DVV+++S I G G + +M + M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
+ PD VT ++ G L ++ + G+ +I +L++ + K
Sbjct: 307 IGRNI-IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY-NSLIDGFCKEN 364
Query: 484 DAKSARMVFDGM----GEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFT 539
A +FD M E + VT+S +I+ Y + LFR++ + PN + +
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 540 SVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP- 598
+++ SG + LF M PS+ Y ++D L G L +AL+ +KM
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 599 --VQPGVSVFGAYLHG 612
+ G+ ++ +HG
Sbjct: 484 SRMTLGIGIYNIIIHG 499
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/519 (20%), Positives = 214/519 (41%), Gaps = 26/519 (5%)
Query: 43 NIDTVKKFHASLIVHGFP----GDTKLLSLYASFGFLRHARRLFDHLP----SPNLHSFK 94
N++ + ++ G P T L++ Y L A LF+ + +P+ F
Sbjct: 325 NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 95 AMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIK 154
M+ W+ N + FY + ++ V+ +++ C + A + +
Sbjct: 385 VMVEWFCKNMEMEKAIEFY-MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE 443
Query: 155 SGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER----NVVSWTSMFVAYVQNDCAVEG 210
S + GF+ N + + K G V +A + ++ NVV + +M +A+ +
Sbjct: 444 SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLA 503
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW-VHGYVVKSGIHVNSFLATSLLN 269
+F+ M E ++ N+FT L+ K Q W V + S N + +++N
Sbjct: 504 RSIFSEMLEKGLEPNNFTYSILIDGFFK-NKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 270 MYVKCGDIGDARKVFDEMLTSDD-ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGIL 328
K G A+++ ++ + S+ ++I G+ + G A+E + + + G
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 329 PNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYV 388
PN + + + + L + P ALID + K + + A +
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 389 F----ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACA 444
F E + +V +NS ISG G A++++++M ++ S D T ++
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS-CDLFTYTTMIDGLL 741
Query: 445 SLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NA 500
G + L S +++ L G+V I + L+N +K G A + + M +K N
Sbjct: 742 KDGNINLASDLYSELLDLGIVPDEI-LHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNV 800
Query: 501 VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFT 539
+ +S +I+G+ +G+ + L +ML++ ++ VF
Sbjct: 801 LLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFN 839
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 185/483 (38%), Gaps = 83/483 (17%)
Query: 178 SARKVFDEIAERNVVSWTSMFVAYVQNDCA----VEGLRLFNRMREGF-VDGNDFTVGSL 232
A K+F + R +F VQ C V L L MR V + T S+
Sbjct: 257 EAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSV 316
Query: 233 VTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDD 292
+ A K G++ + V +V GI ++ ATSL+N Y K ++G A +F+ M
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 293 ELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGML 352
D V ++ M+ + + KA+E + I P+ +L
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS-------------------SVL 417
Query: 353 LHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGS 412
+H ++ C L +P A + +D+ FE+ + + F+ C Q
Sbjct: 418 VHTMIQGC-LKAESP--------EAALEIFNDS---FESWIAHGFMCNKIFLLFCKQ--G 463
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
+A F +M + P+ V ++ A + + L SI + L+ GL + +
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN-FTY 522
Query: 473 TALLNFYAKCGDAKSARMVFDGMG----EKNAVTWSAMISG------------------- 509
+ L++ + K D ++A V + M E N V ++ +I+G
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 510 ---YGMQ--------------GDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVG 552
Y M GD ++ +R+M + PN V FTS++ S +
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 553 EGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMP---VQPGVSVFGAY 609
+ H M + + + Y ++D + ++K A ++P + P VSV+ +
Sbjct: 643 LALEMTHEM-KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 610 LHG 612
+ G
Sbjct: 702 ISG 704
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/553 (19%), Positives = 216/553 (39%), Gaps = 66/553 (11%)
Query: 117 RYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGH 175
R LG ++ V+ A + ++ +A R+ ++ G P LV+ Y K
Sbjct: 301 RGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNE 360
Query: 176 VCSARKVFDEIAERNVVSWTSMFVAYVQNDCA----VEGLRLFNRMREGFVDGNDFTVGS 231
+ A +F+ + E + MF V+ C + + + RM+ + + V +
Sbjct: 361 LGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT 420
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
++ C K S + +S I + F+ + ++ K G + A M
Sbjct: 421 MIQGCLKAESPEAALEIFNDSFESWI-AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG 479
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM 351
E ++V + M++ + + + A +F++ G+ PN
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKD-----VVSWNSFISG 406
+ + N + N +I+ K S A+ + + +++ S+NS I G
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSA-CASLG---ALPLGSSIHAFALKD 462
+ G A+E ++ M SE+ P+ VT +++ C S AL + + + LK
Sbjct: 600 FVKVGDTDSAVETYREM-SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 658
Query: 463 GLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE----KNAVTWSAMISGY-------- 510
L + AL++ + K D K+A +F + E N ++++ISG+
Sbjct: 659 DLPAYG-----ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDA 713
Query: 511 ------GMQGDGV-----------------GSIALFRDMLKEECE----PNEVVFTSVLA 543
M DG+ G+I L D+ E + P+E++ ++
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 544 ACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGV 603
S G + S++ M ++ + P++ Y+ ++ R GNL EA D+M ++ G+
Sbjct: 774 GLSKKGQFLKASKMLEEMKKK-DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM-LEKGI 831
Query: 604 ----SVFGAYLHG 612
+VF + G
Sbjct: 832 VHDDTVFNLLVSG 844
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 170/416 (40%), Gaps = 65/416 (15%)
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
+L+++Y K G + DA +F EML S +D V++ MI GH +A L
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
GI P+ + + + K GLF +T A++ + + +V++
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 385 ARYVF----ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
V +++ D S + G +A +F+R
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER------------------ 470
Query: 441 SACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGM----G 496
F L L S ++ A+++ YA+ G A VF G G
Sbjct: 471 -----------------FQLDCVLSSTTL---AAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 497 EKNAV-TWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGS 555
++N V ++ MI YG +++LF+ M + P+E + S+ + +V E
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 556 RLFHMM----CRELNFVPSMKHYACMVDLLARAGNLKEALDF---IDKMPVQPGVSVFGA 608
R+ M C+ P K YA M+ R G L +A+D ++K V+P V+G+
Sbjct: 571 RILAEMLDSGCK-----PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 609 YLHGCGLHSEFELGEVAIR--RMLELHPDQACYYVLVSNLYASDGRWGMVKQVREM 662
++G +E + E AI+ RM+E H Q+ + VL S L + + G +++ R +
Sbjct: 626 LING---FAESGMVEEAIQYFRMMEEHGVQSNHIVLTS-LIKAYSKVGCLEEARRV 677
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/502 (20%), Positives = 202/502 (40%), Gaps = 32/502 (6%)
Query: 65 LLSLYASFGFLRHARRLFDHLPSPNLHS---FKAMLRWYFLNNLHSDVVSFYHLTRYTLG 121
++ +Y + G + A+ LF+ + S A++ Y L + + ++ R G
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGP-SDGFVLNGLVDAYSKCGHVCSAR 180
+D++ +++++KA + + +A L + G D N L + V A+
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 181 KVFDEIAERNVV----SWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTAC 236
++ E+ + ++ +M +YV+ + + L+ M + V N+ GSL+
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 237 TKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDL 296
+ G + + + + G+ N + TSL+ Y K G + +AR+V+D+M S+ D+
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGL 356
+ +M+ + G +A +F G MGML +
Sbjct: 691 AASNSMLSLCADLGIVSEAESIFNALREKGTC------DVISFATMMYLYKGMGMLDEAI 744
Query: 357 VV-----KCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTV--QKDVVSWNSF---ISG 406
V + GL + N ++ YA +S+ +F + +K ++ W +F +
Sbjct: 745 EVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTL 804
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
+ G EA+ Q +E+ P + L + L A L S L G +
Sbjct: 805 LKKGGVPSEAVSQLQTAYNEA-KPLATPAITATLFSAMGLYAYALESCQE---LTSGEIP 860
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIAL 522
+ A++ Y+ GD A + M EK + VT + ++ YG G G +
Sbjct: 861 REHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRV 920
Query: 523 FRDMLKEECEPNEVVFTSVLAA 544
+ E EP++ +F +V A
Sbjct: 921 HSRLTFGELEPSQSLFKAVRDA 942
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 171/444 (38%), Gaps = 56/444 (12%)
Query: 162 VLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAV-----EGLRLFNR 216
N L+D Y K G + A +F E+ + V T F + C E L +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT-CGTHGHLSEAESLLKK 365
Query: 217 MREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGD 276
M E + + T L++ G + + + K G+ ++ ++L++ +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 277 IGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXX 336
+ + V EM + +D S ++ Y G ++A LF
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF----------------- 468
Query: 337 XXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVF-----ET 391
+ C L T A+ID+YA+ L +A VF +
Sbjct: 469 -----------------ERFQLDCVLSSTTLA--AVIDVYAEKGLWVEAETVFYGKRNMS 509
Query: 392 TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPL 451
+ DV+ +N I ++ +AL +F+ M+++ + PD T + A + +
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG-TWPDECTYNSLFQMLAGVDLVDE 568
Query: 452 GSSIHAFALKDGLV-SCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAM 506
I A L G C Y A++ Y + G A +++ M + N V + ++
Sbjct: 569 AQRILAEMLDSGCKPGCKTYA--AMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 507 ISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELN 566
I+G+ G +I FR M + + N +V TS++ A S G + E R++ M ++
Sbjct: 627 INGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM-KDSE 685
Query: 567 FVPSMKHYACMVDLLARAGNLKEA 590
P + M+ L A G + EA
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEA 709
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 126/595 (21%), Positives = 228/595 (38%), Gaps = 95/595 (15%)
Query: 86 PSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQA 145
P P++ F +L N V+S + TLG HDL +SI + + A
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 146 ARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQN 204
+ ++K G D L+ L++ Y + A + D++ E T F +
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH- 196
Query: 205 DCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLA 264
GL L N+ E +LV +V+ G +
Sbjct: 197 -----GLFLHNKASEAV---------ALVDQ----------------MVQRGCQPDLVTY 226
Query: 265 TSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNW 324
+++N K GDI A + ++M + + ++V + +I + H A++LFT+
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 325 AGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSD 384
GI PN N+LI+ SD
Sbjct: 287 KGIRPNVVTY-----------------------------------NSLINCLCNYGRWSD 311
Query: 385 ARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVL 440
A + ++K +VV++N+ I + G EA ++ + M S P D +T ++
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP-DTITYNLLI 370
Query: 441 SACASLGALPLGSSIHAFAL-KDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK- 498
+ L + F + KD L + Y L+N + KC + +F M ++
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY--NTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 499 ---NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVL--AACSHSGMVGE 553
N VT++ +I G+ GD + +F+ M+ P +++ S+L CS+ G +
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV-PTDIMTYSILLHGLCSY-GKLDT 486
Query: 554 GSRLFHMMCR---ELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYL 610
+F + + ELN Y M++ + +AG + EA D + ++P V + +
Sbjct: 487 ALVIFKYLQKSEMELNIFI----YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMI 542
Query: 611 HGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLV-SNLYASDGRWGMVKQVREM 662
G + + R+M E P+ Y L+ +NL D R + ++EM
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD-RAASAELIKEM 596
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 132/329 (40%), Gaps = 20/329 (6%)
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQ----KDVVSWNSFISGCAQSGS 412
++K G + ++L++ Y +SDA + + V+ D ++ + I G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
A EA+ + +M PD VT V++ G + L ++ ++ + ++ +
Sbjct: 204 ASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLN-KMEAARIKANVVIF 261
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
+++ K + A +F M K N VT++++I+ G + L +ML+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD---LLARAG 585
++ PN V F +++ A G + E +L M + + P Y +++ + R
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLD 380
Query: 586 NLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLV 643
K+ F+ P + + ++G E G R M + L + Y ++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 644 SNLYASDGRWGMVKQVREMIKQRGLNKVP 672
+ + G + + KQ N+VP
Sbjct: 441 QGFFQA----GDCDSAQMVFKQMVSNRVP 465
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/485 (20%), Positives = 198/485 (40%), Gaps = 47/485 (9%)
Query: 159 DGFVLNGLVDAYSKCGHVCSARKVFDEIAE----RNVVSWTSMFVAYVQNDCAVEGLRLF 214
G + + ++ + G V A+++F+ V +++++ AY ++ E + +F
Sbjct: 232 QGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVF 291
Query: 215 NRMREGFVDGNDFTVGSLVTACTKLG-SLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVK 273
N M+E + N T +++ AC K G Q + ++G+ + SLL + +
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 274 CGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXX 333
G AR +FDEM E D+ S+ ++ + G A E+ I+PN
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 334 XXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDA----RYVF 389
+ L G + G+ + N L+ +Y K +A R +
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
++KDVV++N+ + G + G E ++F M+ E P+ +T ++ + G
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL-PNLLTYSTLIDGYSKGGLY 530
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSA 505
I K + + + +AL++ K G SA + D M ++ N VT+++
Sbjct: 531 KEAMEIFR-EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 506 MISGYGMQGDGVGSIALFRDMLKEECEPNEVVF-TSVLAACSHSGMVGEGSR---LFHMM 561
+I +G D + + F +S L+A + + EG+R LF +
Sbjct: 590 IIDAFGRSAT--------MDRSADYSNGGSLPFSSSALSALTET----EGNRVIQLFGQL 637
Query: 562 CRELNFVPS------MKHYACMVDLLARAGNLKEALDFIDKMPVQPGVSVFGAYLHGCGL 615
E N + M+ +C++++ + + ++ ++P V F A L+ C
Sbjct: 638 TTESNNRTTKDCEEGMQELSCILEVFRK----------MHQLEIKPNVVTFSAILNACSR 687
Query: 616 HSEFE 620
+ FE
Sbjct: 688 CNSFE 692
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 117/554 (21%), Positives = 215/554 (38%), Gaps = 144/554 (25%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPS----PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRY 118
+ ++S +G + A+R+F+ + +++F A++ Y + LH + +S ++ +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK- 295
Query: 119 TLGFFHDLVVFSIVLKACSEL-RDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHV 176
G +LV ++ V+ AC + + Q A+ + ++G D N L+ S+ G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 177 CSARKVFDEIAER---------------------------------------NVVSWTSM 197
+AR +FDE+ R NVVS++++
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 198 FVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGI 257
+ + E L LF MR + + + +L++ TK+G + + + GI
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 258 HVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALE 317
+ +LL Y K G + +KVF EM +L++++ +I GYS+ G +A+E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 318 LFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYA 377
+F + AG L VV + +ALID
Sbjct: 536 IFREFKSAG--------------------------LRADVV---------LYSALIDALC 560
Query: 378 KCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDA 433
K LV A + + ++ +VV++NS I +S + RS +S
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD---------RSADYS---- 607
Query: 434 VTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFD 493
+ G+LP SS L + + G ++ + + + R D
Sbjct: 608 -----------NGGSLPFSSS--------ALSALTETEGNRVIQLFGQLTTESNNRTTKD 648
Query: 494 ---GMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSH--- 547
GM E + + + +FR M + E +PN V F+++L ACS
Sbjct: 649 CEEGMQELSCI------------------LEVFRKMHQLEIKPNVVTFSAILNACSRCNS 690
Query: 548 ---SGMVGEGSRLF 558
+ M+ E RLF
Sbjct: 691 FEDASMLLEELRLF 704
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 119/571 (20%), Positives = 220/571 (38%), Gaps = 88/571 (15%)
Query: 109 VVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFV-LNGLV 167
++SF + R GF + +IVLK + R + +A+ ++ +I+ G + N ++
Sbjct: 188 LLSFEKMIRK--GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTML 245
Query: 168 DAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDF 227
D+ K G + K++ E+ RN+ + ++
Sbjct: 246 DSCFKAGDLERVDKIWLEMKRRNI-------------------------------EFSEV 274
Query: 228 TVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEM 287
T L+ +K G + + + HG + +SG V + L+ Y K G DA V DEM
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 288 LTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXX 347
L + ++ I G A EL + ++
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV------------------- 375
Query: 348 XMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGC 407
L+HG +K G F + L D R + +V++N+ I G
Sbjct: 376 SYNTLMHG-YIKMGKFVEASL------------LFDDLR---AGDIHPSIVTYNTLIDGL 419
Query: 408 AQSGSAYEALEMFQRMRSESFSP---PDAVTVVGVLSACASLGALPLGSSIHAFALKDGL 464
+SG+ LE QR++ E + PD +T ++ G L + + ++ L+ G
Sbjct: 420 CESGN----LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG- 474
Query: 465 VSCSIYVGTALLNFYAKCGDAKSA-----RMVFDGMGEKNAVTWSAMISGYGMQGDGVGS 519
+ Y T + GD+ A MV + ++ I G G+ V +
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 520 IALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVD 579
I R + + P+ V +T+V+ +G L+ M R+ PS+ Y ++
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYFVLIY 593
Query: 580 LLARAGNLKEALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHP 634
A+AG L++A + +M V+P V A L+G + + +M E + P
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPP 653
Query: 635 DQACYYVLVSNLYASDGRWGMVKQVREMIKQ 665
++ Y +L+S + +VK +EM+ +
Sbjct: 654 NKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/432 (19%), Positives = 168/432 (38%), Gaps = 39/432 (9%)
Query: 242 LHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTA 301
+++ V+ +++ GI ++L+ K GD+ K++ EM + E V++
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 278
Query: 302 MIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCG 361
+I G+S+ G +A D +G + ++ G
Sbjct: 279 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Query: 362 LFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQ 421
++ T N I + DAR + + DVVS+N+ + G + G EA +F
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFD 398
Query: 422 RMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAK 481
+R+ P S + L DGL G L
Sbjct: 399 DLRAGDIHP----------------------SIVTYNTLIDGLCESGNLEGAQRLK---- 432
Query: 482 CGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
+ + +++F + +T++ ++ G+ G+ + ++ +ML++ +P+ +T+
Sbjct: 433 --EEMTTQLIF-----PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDF---IDKMP 598
G + RL M + P + Y +D L + GNL +A++F I ++
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEVAIRRML--ELHPDQACYYVLVSNLYASDGRWGMV 656
+ P + + G + +F++ ML L+P Y+VL+ +A GR
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG-HAKAGRLEQA 604
Query: 657 KQVREMIKQRGL 668
Q +K+RG+
Sbjct: 605 FQYSTEMKKRGV 616
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 167/421 (39%), Gaps = 18/421 (4%)
Query: 127 VVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDE 185
V ++I++ S+ + +A R H + +SG + N L++ Y K G A V DE
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 186 IAERNVVSWTSMFVAYVQNDCAVEGLRLFNRMRE---GFVDGNDFTVGSLVTACTKLGSL 242
+ + TS + Y+ CA+ + RE + + +L+ K+G
Sbjct: 334 MLNAGIYPTTSTYNIYI---CALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKF 390
Query: 243 HQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAM 302
+ + + IH + +L++ + G++ A+++ +EM T D++++T +
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 303 IVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGL 362
+ G+ + G+ A E++ + GI P+ LH +V
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510
Query: 363 F-DNTPVRNALIDMYAKCHLVSDA----RYVFETTVQKDVVSWNSFISGCAQSGSAYEAL 417
+ + N ID K + A R +F + D V++ + I G ++G A
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 418 EMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLN 477
++ M + P +T ++ A G L K G V ++ ALL
Sbjct: 571 NLYDEMLRKRLYPS-VITYFVLIYGHAKAGRLEQAFQYSTEMKKRG-VRPNVMTHNALLY 628
Query: 478 FYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEP 533
K G+ A M E+ N +++ +IS + L+++ML +E EP
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 534 N 534
+
Sbjct: 689 D 689
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 148/376 (39%), Gaps = 38/376 (10%)
Query: 227 FTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDE 286
+T +++ A K + V + K G+ N T L+ + VK G + DA K+FDE
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 287 MLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXX 346
M E D+ +T++I ++G+ +A LF + G+ P+
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 347 XXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISG 406
+L + G+ V N LID Y + +V +A +++ QK + + +
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK---GFQADVFT 436
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
C S + L+ + + F + +G V
Sbjct: 437 CNTIASCFNRLKRYDEAKQ------------------------------WLFRMMEGGVK 466
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIAL 522
S T L++ Y K G+ + A+ +F M K NA+T++ MI Y QG + L
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLA 582
+M +P+ +TS++ + V E RLF M + + Y M+ L+
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVMISGLS 585
Query: 583 RAGNLKEALDFIDKMP 598
+AG EA D+M
Sbjct: 586 KAGKSDEAFGLYDEMK 601
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 134/331 (40%), Gaps = 48/331 (14%)
Query: 152 VIKSGPSDGFVLNG-----LVDAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQNDC 206
V+K DG V N L++ K G + A K+FDE+ ER + S ++ + + +C
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC 340
Query: 207 AVEGLR----LFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSF 262
++ LF+ + E + + +T G+L+ K+G + + + + G+++
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 263 LATSLLNMYVKCGDIGDARKVFDEM---------------------LTSDDE-------- 293
+ +L++ Y + G + +A ++D M L DE
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 294 ------LDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXX 347
L VS+T +I Y + G+ +A LF + + G+ PN
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 348 XMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETT----VQKDVVSWNSF 403
L + G+ ++ +LI V +A +F + ++ V++
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 404 ISGCAQSGSAYEALEMFQRMRSESFSPPDAV 434
ISG +++G + EA ++ M+ + ++ + V
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 43/307 (14%)
Query: 63 TKLLSLYASFGFLRHARRLFDHLPS----PNLHSFKAMLRWYFLN-NLHSDVVSFYHLTR 117
T L+ L G + A +LFD + ++H + +++ W N+ + F LT
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTE 357
Query: 118 -------YTLGFFHDLVVFSIVLKACSELRDVVQAARLH-CHVIKSGPSDGFVLNGLVDA 169
YT G D V + A L + +Q+ ++ V+ + DG+ G+VD
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 170 YS----------------KCGHVCSA---RKVFDEIAE-----------RNVVSWTSMFV 199
S C + S K +DE + + VS+T++
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 200 AYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHV 259
Y + E RLF M V N T ++ A K G + + + + + +G+
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 260 NSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELF 319
+S+ TSL++ ++ +A ++F EM + + V++T MI G S+ G +A L+
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Query: 320 TDRNWAG 326
+ G
Sbjct: 598 DEMKRKG 604
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 151/343 (44%), Gaps = 26/343 (7%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDV---- 142
P+ +F ++ FL+N S+ V+ G DLV + V+ + D
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALID-RMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 143 -----VQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEIAER----NVVS 193
++AA++ +V+ + + ++D+ K H A +F E+ + NV++
Sbjct: 239 NLLNKMEAAKIEANVV--------IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 194 WTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVV 253
++S+ + RL + M E ++ N T +L+ A K G L + + ++ ++
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 254 KSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPL 313
K I N F +SL+N + +G+A+++ + M+ D ++V++ +I G+ +
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 314 KALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALI 373
K +ELF + + G++ N ++ +V G+ N N L+
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 374 DMYAKCHLVSDARYVFE----TTVQKDVVSWNSFISGCAQSGS 412
D K ++ A VFE +T++ D+ ++N I G ++G
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/421 (19%), Positives = 177/421 (42%), Gaps = 48/421 (11%)
Query: 256 GIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKA 315
GI N + L+N + +C + A + +M+ E D+V+ +++ G+ A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 316 LELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDM 375
+ L G P+ L+HGL L + ALID
Sbjct: 168 VALVDQMVEMGYKPDTVTFTT---------------LIHGLF----LHNKASEAVALIDR 208
Query: 376 YAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVT 435
+ + Q D+V++ + ++G + G AL + +M + +
Sbjct: 209 ------------MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 436 VVGVLSACA---SLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVF 492
+ S C AL L + + ++ +++ S + + L N Y + DA +R++
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI-SCLCN-YGRWSDA--SRLLS 312
Query: 493 DGMGEK---NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSG 549
D + K N VT+SA+I + +G V + L+ +M+K +PN ++S++
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 550 MVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQPGVS---VF 606
+GE ++ +M R+ + +P++ Y +++ +A + + ++ +M + V +
Sbjct: 373 RLGEAKQMLELMIRK-DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 607 GAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLVSNLYASDGRWGMVKQVREMIK 664
+HG + + ++ ++M+ +HP+ Y +L+ L +G+ V E ++
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL-CKNGKLAKAMVVFEYLQ 490
Query: 665 Q 665
+
Sbjct: 491 R 491
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/386 (19%), Positives = 157/386 (40%), Gaps = 14/386 (3%)
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
G ++K G + SLLN + I DA + D+M+ + D V++T +I G
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
+A+ L G P+ + + L + + N +
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 370 NALIDMYAKCHLVSDARYVFETT----VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
+ +ID K DA +F V+ +V++++S IS G +A + M
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
+ P+ VT ++ A G L ++ +K + +I+ ++L+N +
Sbjct: 317 RKIN-PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS-IDPNIFTYSSLINGFCMLDRL 374
Query: 486 KSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
A+ + + M K N VT++ +I+G+ + LFR+M + N V +T++
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEAL---DFIDKMP 598
+ + +F M + P++ Y ++D L + G L +A+ +++ +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 599 VQPGVSVFGAYLHGCGLHSEFELGEV 624
++P + + + G ++++G +
Sbjct: 494 MEPDIYTYNIMIEGMCKAGKWKMGGI 519
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 166/408 (40%), Gaps = 44/408 (10%)
Query: 230 GSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLT 289
+L+ + KLG + + WV + ++GI + L+N V + A +VF+ M +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 290 SDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXM 349
+ D+V++ MI GY + G KA+E D G +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 350 GMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFIS 405
+ L+ + + G+ + +I K +++ VFE ++K +V + I
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 406 GCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLV 465
G A+SGS +A+ + RM E F P D VT V++ G + DGL
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKP-DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 466 SCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIA 521
S++ ++L++ K G A +F+ M EK ++ ++A+I + +IA
Sbjct: 430 INSMFY-SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488
Query: 522 LFRDMLKEE-CEPNEVVFTSVLAACSHSGMVGEGSRLFHMM------------------- 561
LF+ M +EE C+ +T +L+ E +L+ MM
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
Query: 562 ---------CRELNFVPSMK---HYAC--MVDLLARAGNLKEALDFID 595
C+ L+ + M AC M++ L +AG +KEA D
Sbjct: 549 CLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLAD 596
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/395 (19%), Positives = 159/395 (40%), Gaps = 26/395 (6%)
Query: 116 TRYTLGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFVLNGLVDAYSKCGH 175
T YT F + +V ++ + + + +V+++ R+ ++ N ++ Y K G
Sbjct: 221 TLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIV--------TYNTMIKGYCKAGQ 272
Query: 176 VCSARKVFDEIAER----NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGS 231
A + ++ R + +++ +M A + + L+ M E +
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
++ K G L++G V +++ G N + T L++ Y K G + DA ++ M+
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM 351
+ D+V+++ ++ G + G +AL+ F + G+ N
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 352 LLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQKD-----VVSWNSFISG 406
L + + G ++ NALID + K V +A +F+ +++ V ++ +SG
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
+ EAL+++ M + +P A C S G A + D L
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS------GKVARACKILDELAP 566
Query: 467 CSIYVGTA---LLNFYAKCGDAKSARMVFDGMGEK 498
+ + A ++N K G K A + DG+ E+
Sbjct: 567 MGVILDAACEDMINTLCKAGRIKEACKLADGITER 601
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 53/288 (18%)
Query: 370 NALIDMYAKCHLVSDARYVFET----TVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRS 425
N L++ V A VFE ++ D+V++N+ I G ++G +A+E + M +
Sbjct: 226 NFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMET 285
Query: 426 ESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDA 485
D +T + ++ AC YA D
Sbjct: 286 RGHEA-DKITYMTMIQAC-----------------------------------YAD-SDF 308
Query: 486 KSARMVFDGMGEKNAV----TWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSV 541
S ++ M EK +S +I G +G +F +M+++ +PN ++T +
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368
Query: 542 LAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPVQP 601
+ + SG V + RL H M E F P + Y+ +V+ L + G ++EALD+
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD- 426
Query: 602 GVSV----FGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLV 643
G+++ + + + G G + E M E D CY L+
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 180/459 (39%), Gaps = 58/459 (12%)
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKS---GPSDGFVLNGLVDAYSKCGHVCS 178
F D++ F++++ A + +A L+ +++S D + L L+ AY G +
Sbjct: 173 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL--LIKAYCMAGLIER 230
Query: 179 ARKVFDEIAERNVVSWT---SMFVAYVQ-----NDCAVEGLRLFNRMREGFVDGNDFTVG 230
A V E+ +V T +++ AY++ E + +F RM+ T
Sbjct: 231 AEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 290
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
++ K + ++ + N T+L+N + + G A ++F+++
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
Query: 291 DDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG 350
E D+ + A++ YS+ G+P A E+F+ G P+
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY---------------- 394
Query: 351 MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETT----VQKDVVSWNSFISG 406
N ++D Y + L SDA VFE + + S +S
Sbjct: 395 -------------------NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
+++ + + + M SE+ PD + +L+ LG I A +++G +
Sbjct: 436 YSKARDVTKCEAIVKEM-SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA-EMENGPCT 493
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN----AVTWSAMISGYGMQGDGVGSIAL 522
I L+N Y K G + +F + EKN VTW++ I Y + V + +
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 553
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
F +M+ C P+ +L+ACS V + + + M
Sbjct: 554 FEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 107/252 (42%), Gaps = 6/252 (2%)
Query: 84 HLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVV 143
H PN+ ++ A++ + L + + G D+ V++ ++++ S
Sbjct: 315 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED-GLEPDVYVYNALMESYSRAGYPY 373
Query: 144 QAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVV----SWTSMF 198
AA + + G D N +VDAY + G A VF+E+ + S +
Sbjct: 374 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 199 VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
AY + + + M E V+ + F + S++ +LG + + + +
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
+ L+N+Y K G + ++F E+ + D+V+WT+ I YS++ +K LE+
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 553
Query: 319 FTDRNWAGILPN 330
F + +G P+
Sbjct: 554 FEEMIDSGCAPD 565
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 115/270 (42%), Gaps = 20/270 (7%)
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
+++ Q DV+ +N I Q EA ++ ++ + P + + + + C + L
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC--MAGL 227
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFY-----AKCGDAKSARMVFDGMG----EKNA 500
+ + +++ VS +G + N Y + G+ + A VF M +
Sbjct: 228 IERAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 501 VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
T++ MI+ YG S L+ +M +C+PN +T+++ A + G+ + +F
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 561 MCRELNFVPSMKHYACMVDLLARAG---NLKEALDFIDKMPVQPGVSVFGAYLHG---CG 614
+ +E P + Y +++ +RAG E + M +P + + + G
Sbjct: 347 L-QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Query: 615 LHSEFELGEVAIRRMLELHPDQACYYVLVS 644
LHS+ E ++R L + P + +L+S
Sbjct: 406 LHSDAEAVFEEMKR-LGIAPTMKSHMLLLS 434
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 119/566 (21%), Positives = 221/566 (39%), Gaps = 60/566 (10%)
Query: 141 DVVQAARLHCHVIKSGPSDGFV-----LNGL-VDAYSKCGHVCSARKVFDEIAERNVVSW 194
+V +A H V++ G G V L GL VD + S V D NVV++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL--VLDCGPAPNVVTF 289
Query: 195 TSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVK 254
++ + + LF M + ++ + +L+ K G L G + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 255 SGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLK 314
G+ ++ + +S +++YVK GD+ A V+ ML ++V++T +I G Q G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 315 ALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALID 374
A ++ G+ P+ G L+ ++K G + + L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 375 MYAKCHLVSDA-RY---VFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSP 430
+K L+ A R+ + +++ +VV +NS I G + EAL++F+ M
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK- 528
Query: 431 PDAVTVVGVLSACASLG--------------------ALPLGSSIHAFA----------- 459
PD T V+ G AL + I AF
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 460 ---LKDGLVSCSIYVGTALLNFYAKCGDAKSARMVF----DGMGEKNAVTWSAMISGYGM 512
++ +S I V +++ KC + A F +G E + VT++ MI GY
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 513 QGDGVGSIALFRDMLKEECEPNEVVFTSVL-AACSHSGMVGEGSRLFHMMCRELNFVPSM 571
+ +F + PN V T ++ C ++ M G R+F +M E P+
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG-AIRMFSIMA-EKGSKPNA 706
Query: 572 KHYACMVDLLARAGNLKEALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRR 628
Y C++D +++ +++ + ++M + P + + + G + +
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 629 MLE--LHPDQACYYVLVSNLYASDGR 652
++ L PD Y +L+ Y GR
Sbjct: 767 AIDAKLLPDVVAYAILIRG-YCKVGR 791
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 101/249 (40%), Gaps = 6/249 (2%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKA-CSELRDVVQA 145
P++ +F ++R + + + F + +G D + + ++ A C ++ +
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEAL-FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 146 ARLHCHVIKSGPSDGFVLNGLVDAYSKCGHVCSARKVFDEI----AERNVVSWTSMFVAY 201
+D V N ++ KC + A K F+ + E ++V++ +M Y
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 202 VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
E R+F ++ N T+ L+ K + + + + G N+
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
L++ + K DI + K+F+EM +VS++ +I G +RG +A +F
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 322 RNWAGILPN 330
A +LP+
Sbjct: 767 AIDAKLLPD 775
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 175/429 (40%), Gaps = 55/429 (12%)
Query: 75 LRHARRLFDHLPS----PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTL--GFFHDLVV 128
+ A ++F+ + PNL+++ AM+ Y +V Y L + L ++VV
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKT---GNVRQAYGLYKEILVAELLPNVVV 306
Query: 129 FSIVLKACSELRDVVQAARLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIA 187
F ++ + R++V A L H++K G +V N L+ + K G++ A + E+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 188 ERN----VVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLH 243
N V ++T + D E RLF +M+ + + T SL+ K ++
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 244 QGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMI 303
Q + + SG+ N ++L++ Y DI A ++ EM D+V++TA+I
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 304 VGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLF 363
+ + + +AL L++D AGI PN
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHPN--------------------------------- 513
Query: 364 DNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEM 419
D+T L+D + K +S A ++ Q+ + V + I G Q+G A
Sbjct: 514 DHTFA--CLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 420 FQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFY 479
F MRS + PD + V +L + + +K G++ ++ V L FY
Sbjct: 572 FSDMRSCGIT-PDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP-NLLVNQLLARFY 629
Query: 480 AKCGDAKSA 488
G KSA
Sbjct: 630 QANGYVKSA 638
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 146/369 (39%), Gaps = 44/369 (11%)
Query: 232 LVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSD 291
L C K G + + + + GI N ++ T + + + +A K+F+ M
Sbjct: 205 LFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHG 264
Query: 292 DELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGM 351
+L +++AMI GY + G+ +A L+ + A +LPN
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 352 LLHGLVVKCGLFDNTPVRNALI-------DMYAKCHLVSDARYVFETTVQKDVVSWNSFI 404
L +VK G+ N V N LI +M L+S+ + + DV ++ I
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL---NLSPDVFTYTILI 381
Query: 405 SGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGL 464
+G EA +FQ+M++E P A S IH +
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSAT----------------YNSLIHGY------ 419
Query: 465 VSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFR 524
C Y L+ + M G+ E N +T+S +I GY D ++ L+
Sbjct: 420 --CKEYNMEQALDL--------CSEMTASGV-EPNIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 525 DMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARA 584
+M + P+ V +T+++ A + E RL+ M E P+ +AC+VD +
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML-EAGIHPNDHTFACLVDGFWKE 527
Query: 585 GNLKEALDF 593
G L A+DF
Sbjct: 528 GRLSVAIDF 536
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 130/330 (39%), Gaps = 12/330 (3%)
Query: 78 ARRLFDHLPS----PNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVL 133
AR LF H+ PNL+ + ++ + + + V +L D+ ++I++
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME-SLNLSPDVFTYTILI 381
Query: 134 KACSELRDVVQAARLHCHVIKSG--PSDGFVLNGLVDAYSKCGHVCSARKVFDEIA---- 187
V +A RL + PS N L+ Y K ++ A + E+
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSA-TYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
E N+++++++ Y + L+ M + + T +L+ A K ++ +
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
++ ++++GIH N L++ + K G + A + E + V +T +I G
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
Q G+ L+A F+D GI P+ M+L ++K G+ N
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQKDV 397
V L Y V A ++ ++ K V
Sbjct: 621 VNQLLARFYQANGYVKSACFLTNSSRLKTV 650
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 180/459 (39%), Gaps = 58/459 (12%)
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKS---GPSDGFVLNGLVDAYSKCGHVCS 178
F D++ F++++ A + +A L+ +++S D + L L+ AY G +
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL--LIKAYCMAGLIER 208
Query: 179 ARKVFDEIAERNVVSWT---SMFVAYVQ-----NDCAVEGLRLFNRMREGFVDGNDFTVG 230
A V E+ +V T +++ AY++ E + +F RM+ T
Sbjct: 209 AEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 268
Query: 231 SLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTS 290
++ K + ++ + N T+L+N + + G A ++F+++
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 291 DDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMG 350
E D+ + A++ YS+ G+P A E+F+ G P+
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY---------------- 372
Query: 351 MLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETT----VQKDVVSWNSFISG 406
N ++D Y + L SDA VFE + + S +S
Sbjct: 373 -------------------NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Query: 407 CAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVS 466
+++ + + + M SE+ PD + +L+ LG I A +++G +
Sbjct: 414 YSKARDVTKCEAIVKEM-SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA-EMENGPCT 471
Query: 467 CSIYVGTALLNFYAKCGDAKSARMVFDGMGEKN----AVTWSAMISGYGMQGDGVGSIAL 522
I L+N Y K G + +F + EKN VTW++ I Y + V + +
Sbjct: 472 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 531
Query: 523 FRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMM 561
F +M+ C P+ +L+ACS V + + + M
Sbjct: 532 FEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 107/252 (42%), Gaps = 6/252 (2%)
Query: 84 HLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVV 143
H PN+ ++ A++ + L + + G D+ V++ ++++ S
Sbjct: 293 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED-GLEPDVYVYNALMESYSRAGYPY 351
Query: 144 QAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCSARKVFDEIAERNVV----SWTSMF 198
AA + + G D N +VDAY + G A VF+E+ + S +
Sbjct: 352 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 411
Query: 199 VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
AY + + + M E V+ + F + S++ +LG + + + +
Sbjct: 412 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 471
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
+ L+N+Y K G + ++F E+ + D+V+WT+ I YS++ +K LE+
Sbjct: 472 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 531
Query: 319 FTDRNWAGILPN 330
F + +G P+
Sbjct: 532 FEEMIDSGCAPD 543
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 115/270 (42%), Gaps = 20/270 (7%)
Query: 390 ETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGAL 449
+++ Q DV+ +N I Q EA ++ ++ + P + + + + C + L
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC--MAGL 205
Query: 450 PLGSSIHAFALKDGLVSCSIYVGTALLNFY-----AKCGDAKSARMVFDGMG----EKNA 500
+ + +++ VS +G + N Y + G+ + A VF M +
Sbjct: 206 IERAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 501 VTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHM 560
T++ MI+ YG S L+ +M +C+PN +T+++ A + G+ + +F
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 561 MCRELNFVPSMKHYACMVDLLARAG---NLKEALDFIDKMPVQPGVSVFGAYLHG---CG 614
+ +E P + Y +++ +RAG E + M +P + + + G
Sbjct: 325 L-QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 615 LHSEFELGEVAIRRMLELHPDQACYYVLVS 644
LHS+ E ++R L + P + +L+S
Sbjct: 384 LHSDAEAVFEEMKR-LGIAPTMKSHMLLLS 412
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 112/592 (18%), Positives = 219/592 (36%), Gaps = 66/592 (11%)
Query: 30 PHPPTLYLSPICKNIDTVKKFHASL----------IVHGFPGDTKLLSLYASFGFLRHAR 79
P P + + + I +KKF + IVHG L++ + + A
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 80 RLFDHLP----SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKA 135
L + P++ + ++L Y SD V+ +G+ D + F+ ++
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLIHG 199
Query: 136 CSELRDVVQAARLHCHVIKSGPSDGFVLNGLV-DAYSKCGHVCSARKVFDEIAERNVVSW 194
+A L +++ G V G+V + K G A + +++ + +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 195 TSMFVAYVQNDCAV----EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHG 250
+F + + C + L LF M + N T SL++ G +
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 251 YVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRG 310
+++ I+ N +L++ +VK G +A K++D+M+ + D+ ++ +++ G+
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 311 HPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRN 370
KA ++F +V F + N
Sbjct: 380 RLDKAKQMFE-----------------------------------FMVSKDCFPDVVTYN 404
Query: 371 ALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSE 426
LI + K V D +F + D V++ + I G G A ++F++M S+
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 427 SFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAK 486
PPD +T +L + G L + + ++ + IY+ T ++ K G
Sbjct: 465 GV-PPDIMTYSILLDGLCNNGKLEKALEVFDY-MQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 487 SARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVL 542
+F + K N VT++ MISG + + AL + M ++ PN + +++
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Query: 543 AACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFI 594
A G + L M R FV + ++L K LD +
Sbjct: 583 RAHLRDGDKAASAELIREM-RSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 115/636 (18%), Positives = 233/636 (36%), Gaps = 90/636 (14%)
Query: 62 DTKLLSLYASFGFLRHARRLFDHLPSPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLG 121
D KL FG + +R P P++ F +L V+S + L
Sbjct: 63 DMKLDDAIGLFGGMVKSR------PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ-RLE 115
Query: 122 FFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSGPSDGFV-LNGLVDAYSKCGHVCSAR 180
H L ++I++ + A L ++K G V L+ L++ Y + A
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 181 KVFDEIAER----NVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTAC 236
+ D++ E + +++T++ ++ A E + L +RM + N T G +V
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 237 TKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDL 296
K G + + + I + + ++++ K + DA +F EM T ++
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 297 VSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGL 356
V+++++I G A +L +D I PN
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF---------------------- 333
Query: 357 VVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGS 412
NALID + K +A +++ +++ D+ ++NS ++G
Sbjct: 334 -------------NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 413 AYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVG 472
+A +MF+ M S+ PD VT ++ + G+ + GLV
Sbjct: 381 LDKAKQMFEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG------ 433
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECE 532
+ VT++ +I G GD + +F+ M+ +
Sbjct: 434 --------------------------DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 533 PNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALD 592
P+ + ++ +L ++G + + +F M ++ + Y M++ + +AG + + D
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 593 FIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLELH--PDQACYYVLVSNLY 647
+ V+P V + + G + +++M E P+ Y L+
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 648 ASDGRWGMVKQVREMIKQRGLNKVPGCSLVEIDLND 683
+ + +REM R + LV L+D
Sbjct: 587 RDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 622
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 157/388 (40%), Gaps = 45/388 (11%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
PN +F ++ FL+N S+ ++ G DLV + +V+ + D A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALID-RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 147 RLHCHVIKSGPSDG-FVLNGLVDAYSKCGHVCSARKVFDEIAER----NVVSWTSMFVAY 201
L + + G + N ++D K H+ A +F E+ + NVV+++S+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 202 VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
+ RL + M E ++ + FT +L+ A K G L + + ++ +VK I +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
+SL+N + + +A+++F+ M++ D+V++ +I G+ + + +E+F +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
+ G++ N M + +V G+ N N L+D K
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 382 VSDARYVFE---------------------------------------TTVQKDVVSWNS 402
+ A VFE V+ DVV++N+
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 403 FISGCAQSGSAYEALEMFQRMRSESFSP 430
ISG + GS EA +F+ M+ + P
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/476 (19%), Positives = 189/476 (39%), Gaps = 51/476 (10%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
PN+ + ++L Y + S+ V+ + G+ + V F+ ++ +A
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVD-QMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 147 RLHCHVIKSGPSDGFVLNGLV-DAYSKCGHVCSARKVFDEIAERNVVSWTSMFVAYVQND 205
L ++ G V G+V + K G A + +++ + + ++ +
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 206 CAV----EGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
C + L LF M + N T SL++ G + +++ I+ +
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
F ++L++ +VK G + +A K++DEM+ + +V+++++I G+ +A ++F
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE- 385
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
+V F + N LI + K
Sbjct: 386 ----------------------------------FMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 382 VSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVV 437
V + VF Q+ + V++N I G Q+G A E+F+ M S+ PP+ +T
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV-PPNIMTYN 470
Query: 438 GVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGE 497
+L G L + + L+ + +IY ++ K G + +F +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 498 K----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAACSHSG 549
K + V ++ MISG+ +G + ALF++M ++ PN + +++ A G
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/499 (19%), Positives = 182/499 (36%), Gaps = 49/499 (9%)
Query: 211 LRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNM 270
+ L +M+ + N +T L+ + L V G ++K G N +SLLN
Sbjct: 101 ISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 160
Query: 271 YVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPN 330
Y I +A + D+M + + + V++ +I G +A+ L G P+
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
Query: 331 XXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFE 390
+ L + + L + N +ID K + DA +F+
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 391 TT----VQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASL 446
++ +VV+++S IS G +A + M + PD T ++ A
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKE 339
Query: 447 GAL--------------------PLGSSIHAFALKDGLVSCS--------------IYVG 472
G L S I+ F + D L +
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 473 TALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLK 528
L+ + K + VF M ++ N VT++ +I G GD + +F++M+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 529 EECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLK 588
+ PN + + ++L +G + + +F + R P++ Y M++ + +AG ++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVE 518
Query: 589 EALDFIDKMP---VQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLV 643
+ D + V+P V + + G E + + M E P+ CY L+
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 644 SNLYASDGRWGMVKQVREM 662
R + ++EM
Sbjct: 579 RARLRDGDREASAELIKEM 597
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 160/385 (41%), Gaps = 13/385 (3%)
Query: 188 ERNVVSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKW 247
E ++V++TS+ + + E + + N+M E + + +++ + K G ++
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
+ + GI + + TSL+N G DA + M + D++++ A+I +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
+ G L A EL+ + I PN + L+ G F +
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRM 423
+LI+ + KC V DA +F QK + +++ + I G Q G A E+F M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALK---DGLVSCSIYVGTALLNFYA 480
S PP+ T +L G + I K DG V+ +I+ LL+
Sbjct: 379 VSRGV-PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG-VAPNIWTYNVLLHGLC 436
Query: 481 KCGDAKSARMVFDGMGEKN----AVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEV 536
G + A MVF+ M ++ +T++ +I G G ++ LF + + +PN V
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 537 VFTSVLAACSHSGMVGEGSRLFHMM 561
+T++++ G+ E LF M
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKM 521
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 174/452 (38%), Gaps = 75/452 (16%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P++ +F +++ + L N + +S + +G D+V+++ ++ + + V A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVN-QMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 147 RLHCHVIKSGPSDGFVL-NGLVDAYSKCGHVCSARKVFDEIAER----NVVSWTSMFVAY 201
L + G V+ LV+ G A + + +R +V+++ ++ A+
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 202 VQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIHVNS 261
V+ ++ L+N M + N FT SL+ G + + + + + G +
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 262 FLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALELFTD 321
TSL+N + KC + DA K+F EM + +++T +I G+ Q G P A E+F+
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 322 RNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAKCHL 381
G+ PN +LLH L N V+ AL+ +
Sbjct: 378 MVSRGVPPNIRTY---------------NVLLHCLCY------NGKVKKALM-------I 409
Query: 382 VSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAVTVVGVLS 441
D + V ++ ++N + G +G +AL +F+ MR + +
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 442 ACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSARMVFDGMGEK--- 498
C K G K+A +F + K
Sbjct: 470 MC-------------------------------------KAGKVKNAVNLFCSLPSKGVK 492
Query: 499 -NAVTWSAMISGYGMQGDGVGSIALFRDMLKE 529
N VT++ MISG +G + LFR M ++
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 150/354 (42%), Gaps = 39/354 (11%)
Query: 250 GYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQR 309
G ++K G + TSL+N + + +A + ++M+ + D+V +T +I +
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 310 GHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVR 369
GH AL LF GI P+ ++++ +V GL ++ R
Sbjct: 191 GHVNYALSLFDQMENYGIRPD--------------------VVMYTSLVN-GLCNSGRWR 229
Query: 370 NALIDMYAKCHLVSDARYVFETTVQKDVVSWNSFISGCAQSGSAYEALEMFQRMRSESFS 429
+A S R + + ++ DV+++N+ I + G +A E++ M S +
Sbjct: 230 DA----------DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 430 PPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCGDAKSAR 489
P+ T +++ G + + G + T+L+N + KC A
Sbjct: 280 -PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP-DVVAYTSLINGFCKCKKVDDAM 337
Query: 490 MVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFTSVLAAC 545
+F M +K N +T++ +I G+G G + +F M+ PN + +L
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 546 SHSGMVGEGSRLFH-MMCRELNFV-PSMKHYACMVDLLARAGNLKEALDFIDKM 597
++G V + +F M RE++ V P++ Y ++ L G L++AL + M
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 188/478 (39%), Gaps = 51/478 (10%)
Query: 120 LGFFHDLVVFSIVLKACSELRDVVQAARLHCHVIKSG-PSDGFVLNGLVDAYSKCGHVCS 178
LG+ D F+ ++K V +A L ++++G D N +V+ + G
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 179 ARKVFDEIAERNV----VSWTSMFVAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVT 234
A + ++ ERNV +++++ + ++ C + LF M + + T SLV
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 235 ACTKLGSLHQGKWVHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDEL 294
K G + G + +V I N LL+++VK G + +A +++ EM+T
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 295 DLVSWTAMIVGYSQRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLH 354
+++++ ++ GY + +A +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML----------------------------------- 356
Query: 355 GLVVKCGLFDNTPVRNALIDMYAKCHLVSDARYVFETTVQK----DVVSWNSFISGCAQS 410
L+V+ + +LI Y V D VF ++ + V+++ + G QS
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 411 GSAYEALEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIY 470
G A E+FQ M S PD +T +L G L I L+ + I
Sbjct: 417 GKIKLAEELFQEMVSHGV-LPDVMTYGILLDGLCDNGKLEKALEIFE-DLQKSKMDLGIV 474
Query: 471 VGTALLNFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDM 526
+ T ++ K G + A +F + K N +T++ MISG +G + L R M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 527 LKEECEPNEVVFTSVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARA 584
++ PN+ + +++ A G + ++L M + F ++D+L A
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDMLLSA 591
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 133/322 (41%), Gaps = 28/322 (8%)
Query: 361 GLFDNTPVRNALIDMYAKCHLVSDARYVFETTV----QKDVVSWNSFISGCAQSGSAYEA 416
G+ N N +I+ + +C A V + + D ++N+ I G G EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 417 LEMFQRMRSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALL 476
+ + RM E+ PD VT +++ G L + +++ V ++ + ++
Sbjct: 178 VVLVDRM-VENGCQPDVVTYNSIVNGICRSGDTSLALDLLR-KMEERNVKADVFTYSTII 235
Query: 477 NFYAKCGDAKSARMVFDGMGEK----NAVTWSAMISGYGMQGDGVGSIALFRDMLKEECE 532
+ + G +A +F M K + VT+++++ G G L +DM+ E
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 533 PNEVVFTSVLAACSHSGMVGEGSRLF-HMMCRELNFVPSMKHYA------CMVDLLARAG 585
PN + F +L G + E + L+ M+ R ++ P++ Y CM + L+ A
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS--PNIITYNTLMDGYCMQNRLSEAN 353
Query: 586 NLKEALDFIDKMPVQPGVSVFGAYLHGCGLHSEFELGEVAIRRMLE--LHPDQACYYVLV 643
N+ LD + + P + F + + G + + G R + + L + Y +LV
Sbjct: 354 NM---LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 644 SNLYASDGRWGMVKQVREMIKQ 665
S G +K E+ ++
Sbjct: 411 QGFCQS----GKIKLAEELFQE 428
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 162/392 (41%), Gaps = 18/392 (4%)
Query: 248 VHGYVVKSGIHVNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYS 307
+ G ++K G + SL+N + + + DA + D+M+ + D+V++ A+I
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 308 QRGHPLKALELFTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTP 367
+ A + F + GI PN L ++K + N
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 368 VRNALIDMYAKCHLVSDARYVFETTVQ----KDVVSWNSFISGCAQSGSAYEALEMFQRM 423
+AL+D + K V +A+ +FE V+ D+V+++S I+G EA +MF M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 424 RSESFSPPDAVTVVGVLSACASLGALPLGSSIHAFALKDGLVSCSIYVGTALLNFYAKCG 483
S+ D V+ +++ + G + + GLVS ++ T + F+ + G
Sbjct: 322 VSKG-CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF-QAG 379
Query: 484 DAKSARMVFDGMG----EKNAVTWSAMISGYGMQGDGVGSIALFRDMLKEECEPNEVVFT 539
D A+ F M + T++ ++ G G+ ++ +F DM K E + + V +T
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 540 SVLAACSHSGMVGEGSRLFHMMCRELNFVPSMKHYACMVDLLARAGNLKEALDFIDKMPV 599
+V+ +G V E LF + + P + Y M+ L G L E KM
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 600 QPGVSVFGAYLHGCGLHS-EFELGEVAIRRML 630
+ G + C L + L I++ML
Sbjct: 499 E------GLMKNDCTLSDGDITLSAELIKKML 524
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 174/420 (41%), Gaps = 59/420 (14%)
Query: 87 SPNLHSFKAMLRWYFLNNLHSDVVSFYHLTRYTLGFFHDLVVFSIVLKACSELRDVVQAA 146
P+ + +++ + N SD VS +G+ D+V ++ ++ + + + V A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVD-KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 147 RLHCHVIKSGPSDGFV-----LNGLVDAYSKCGHVCSARKVFDEIAER---NVVSWTSMF 198
+ + G V +NGL ++ S+ +AR + D I ++ NV++++++
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNS-SRWSD--AARLLSDMIKKKITPNVITYSALL 267
Query: 199 VAYVQNDCAVEGLRLFNRMREGFVDGNDFTVGSLVTACTKLGSLHQGKWVHGYVVKSGIH 258
A+V+N +E LF M +D + T SL+ + + + +V G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 259 VNSFLATSLLNMYVKCGDIGDARKVFDEMLTSDDELDLVSWTAMIVGYSQRGHPLKALEL 318
+ +L+N + K + D K+F EM + V++ +I G+ Q G KA E
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 319 FTDRNWAGILPNXXXXXXXXXXXXXXXXXXMGMLLHGLVVKCGLFDNTPVRNALIDMYAK 378
F+ ++ GI P+ +LL GL DN + AL+
Sbjct: 388 FSQMDFFGISPDIWTY---------------NILLGGLC------DNGELEKALV----- 421
Query: 379 CHLVSDARYVFETTVQK----DVVSWNSFISGCAQSGSAYEALEMFQRMRSESFSPPDAV 434
+FE ++ D+V++ + I G ++G EA +F + + PD V
Sbjct: 422 ---------IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL-KPDIV 471
Query: 435 TVVGVLSACASLGALPLGSSIHAFALKDGLVS--CS-----IYVGTALLNFYAKCGDAKS 487
T ++S + G L +++ ++GL+ C+ I + L+ CG A S
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 531