Miyakogusa Predicted Gene
- Lj4g3v0669750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0669750.1 Non Chatacterized Hit- tr|I1NDI0|I1NDI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52584 PE,73.09,0,RNA
recognition motif,RNA recognition motif domain; NUCLEAR TRANSPORT
FACTOR 2 (NTF2) FAMILY PROTEIN,CUFF.47899.1
(463 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25150.1 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 257 1e-68
AT1G13730.1 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 257 1e-68
AT3G25150.2 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 257 1e-68
AT5G60980.2 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 245 6e-65
AT2G03640.2 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 242 4e-64
AT2G03640.3 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 238 5e-63
AT2G03640.1 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 238 6e-63
AT5G60980.1 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 238 7e-63
AT2G03640.4 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 234 9e-62
AT1G69250.1 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 224 1e-58
AT1G69250.2 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 186 4e-47
AT5G48650.1 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 155 6e-38
AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2) fami... 107 2e-23
AT5G43960.1 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 74 2e-13
AT3G55540.1 | Symbols: | nuclear transport factor 2 (NTF2) fami... 73 3e-13
AT5G43960.2 | Symbols: | Nuclear transport factor 2 (NTF2) fami... 66 6e-11
>AT3G25150.1 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr3:9157161-9159362 REVERSE LENGTH=488
Length = 488
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/402 (41%), Positives = 229/402 (56%), Gaps = 29/402 (7%)
Query: 7 APTPQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXXEINKKILS 66
A TP MVGNAFV QYY ILH PE VHRFY E S L RPEE+G I+KKI++
Sbjct: 13 ACTPDMVGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSITSTLQAIDKKIMA 72
Query: 67 QDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDKGYFVLNDV 126
Y EI + D+Q S+ G IV VTG LTG D+++R F+Q+FFLAPQ+ GYFVLND+
Sbjct: 73 LGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDM 132
Query: 127 FRYVDEYKSVDIESVPSRD--ADEITLSDAFAPEPEPN------HVPEDIPPSQTAIAET 178
FR++DE V +P + A T D A + P+ +V E+ QT +
Sbjct: 133 FRFIDEGTVVHGNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEKYVQENHAVKQTEVLSK 192
Query: 179 DASIRKEVSQPLENGKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFASI 238
+ ++V P E+ ++S E+ + ++DS T E PK+S+ASI
Sbjct: 193 SINEPEKVFTPSEDEQVSAAEEAL--VTETVNEAPIEVQKVGESDSRTGE-IPKRSYASI 249
Query: 239 VNALNENAAPFHVRTSPMKPVEQPRVSSK--------PASEAQAPIADVLLEKNNENAGK 290
V + ENAAP +P K VE + + P SE A+V + +NN+ +
Sbjct: 250 VKVMKENAAPMSASRTPTK-VEPKKQEDQAIHIPLPTPLSEKSDSGANVAVNENNQENER 308
Query: 291 AH--AIFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQS 348
A +I++ LP++AT LE F +FG I+TNGIQVRS Q+G CFGFVEFESA+SMQS
Sbjct: 309 ALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRS--QKGFCFGFVEFESASSMQS 366
Query: 349 ALEAA-VILDNRRLSIEERRA---NNDRARYPSG-RGGYRND 385
A+EA+ V+L+ ++ +EE+R+ N R R G GYRN+
Sbjct: 367 AIEASPVMLNGHKVVVEEKRSTARGNYRGRSTFGVNTGYRNE 408
>AT1G13730.1 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr1:4710519-4712332 FORWARD LENGTH=428
Length = 428
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 221/402 (54%), Gaps = 36/402 (8%)
Query: 1 MAATDGAPT--PQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXX 58
MA AP P +GN+FVE+YY++L+ P QVH+FY + S+L RP DG
Sbjct: 1 MALESNAPVVDPNTIGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLK 60
Query: 59 EINKKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDK 118
IN++I+S DY+ +++IL+ADSQ SY GV+ VTG LT + + +F+QSFFL P +
Sbjct: 61 AINEQIMSFDYEISKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLNG 120
Query: 119 GYFVLNDVFRYV-DEYKSVDIESVPSRDADEITLSDAFAPEPEPNHV--PEDIPPSQTAI 175
YFVLNDVFRYV DE +E ++ E + P + + V P IP Q
Sbjct: 121 SYFVLNDVFRYVADEI----VEPEANKKEVEEVIPQVVQPTEQVDEVAEPVTIPTQQPEA 176
Query: 176 AETDASIRKEVSQPLENGKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSF 235
+T + K+ + + NG E + D + DAPKKSF
Sbjct: 177 KQTTENTVKKPERAVANGHPKTQEDNVVN------------------DKSNGVDAPKKSF 218
Query: 236 ASIVNALNENAAPFHVRTSPMKPVEQP--RVSSKPASEAQAPIADVLLEKNNENAGKAHA 293
A IV L +N A F+ + SP KP +P + S+ S+A AP+++ + + +
Sbjct: 219 AHIVQDLAQNGATFNAKASPAKPKSKPVTKPSAARESKAPAPVSEHSSAATIDQQAEGYT 278
Query: 294 IFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQSAL--- 350
IFVANL M+AT EQL F FG I +GIQVRS + +G+CFGFV F SA +++ L
Sbjct: 279 IFVANLLMDATPEQLNETFKGFGAITKDGIQVRSYRLKGNCFGFVTFASAEAVKLVLQAH 338
Query: 351 -EAAVILDNRRLSIEERRANNDRARYPSGRGGYRND---RND 388
E+A+ + NRR+SIEE+R NND R GGYRND RND
Sbjct: 339 KESAIRIGNRRVSIEEKRGNNDNGRPAMRNGGYRNDNGYRND 380
>AT3G25150.2 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr3:9157161-9160052 REVERSE LENGTH=587
Length = 587
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/402 (41%), Positives = 229/402 (56%), Gaps = 29/402 (7%)
Query: 7 APTPQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXXEINKKILS 66
A TP MVGNAFV QYY ILH PE VHRFY E S L RPEE+G I+KKI++
Sbjct: 112 ACTPDMVGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSITSTLQAIDKKIMA 171
Query: 67 QDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDKGYFVLNDV 126
Y EI + D+Q S+ G IV VTG LTG D+++R F+Q+FFLAPQ+ GYFVLND+
Sbjct: 172 LGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDM 231
Query: 127 FRYVDEYKSVDIESVPSRD--ADEITLSDAFAPEPEPN------HVPEDIPPSQTAIAET 178
FR++DE V +P + A T D A + P+ +V E+ QT +
Sbjct: 232 FRFIDEGTVVHGNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEKYVQENHAVKQTEVLSK 291
Query: 179 DASIRKEVSQPLENGKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFASI 238
+ ++V P E+ ++S E+ + ++DS T E PK+S+ASI
Sbjct: 292 SINEPEKVFTPSEDEQVSAAEEAL--VTETVNEAPIEVQKVGESDSRTGE-IPKRSYASI 348
Query: 239 VNALNENAAPFHVRTSPMKPVEQPRVSSK--------PASEAQAPIADVLLEKNNENAGK 290
V + ENAAP +P K VE + + P SE A+V + +NN+ +
Sbjct: 349 VKVMKENAAPMSASRTPTK-VEPKKQEDQAIHIPLPTPLSEKSDSGANVAVNENNQENER 407
Query: 291 AH--AIFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQS 348
A +I++ LP++AT LE F +FG I+TNGIQVRS Q+G CFGFVEFESA+SMQS
Sbjct: 408 ALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRS--QKGFCFGFVEFESASSMQS 465
Query: 349 ALEAA-VILDNRRLSIEERRAN---NDRARYPSG-RGGYRND 385
A+EA+ V+L+ ++ +EE+R+ N R R G GYRN+
Sbjct: 466 AIEASPVMLNGHKVVVEEKRSTARGNYRGRSTFGVNTGYRNE 507
>AT5G60980.2 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr5:24543988-24546027 FORWARD LENGTH=460
Length = 460
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 172/409 (42%), Positives = 227/409 (55%), Gaps = 38/409 (9%)
Query: 1 MAATDGAPTP--QMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXX 58
MA + +P+P ++VG AFVEQYY ILH P VHRFY ++S L+RP+ G
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 59 EINKKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDK 118
IN KILS Y+ + EI +AD+Q S++ GVIV VTG LTG DN+++KF+QSFFLAPQDK
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 119 GYFVLNDVFRYVDEYK-SVDIESVPSRDADEITLSDAFAP-EPE---PNHVPEDIPPSQT 173
GYFVLNDVFR+++E + + SVP T D AP EPE +H PE P
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVPING----TTRDVQAPIEPERVVVSHEPEVEPEPVA 176
Query: 174 AIAETDASIRKEVSQPLEN--GKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAP 231
+I E D EV P + G + E + P S Q DAP
Sbjct: 177 SIEEEDLDNVAEVYDPSDKDEGVVVDVEPIEPPTQISHNEIL----------SVPQGDAP 226
Query: 232 KKSFASIVNALNENAAP-FHV-RTSPM-KPVEQPRVSSKPASEAQAPIA---DVLLEKNN 285
K S+ASI+ + + AP HV R P PV Q + A+ + +V +
Sbjct: 227 KHSYASILKQMKSSPAPTTHVARNKPRPAPVNQKLTAPPAEPAARPEASAHENVPNSSHV 286
Query: 286 ENAGKAHAIFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAAS 345
+ H+I+V NLP ++T QLE F FG IK GIQVRSNKQQG CFGFVEFE+++
Sbjct: 287 DVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQQGFCFGFVEFETSSG 346
Query: 346 MQSALEAA-VILDNRRLSIEERRA--------NNDRARYPSGRGGYRND 385
QSALEA+ V + +R+ +EE++ R RY SGRG +RN+
Sbjct: 347 KQSALEASPVTIGDRQAVVEEKKTNSRGGGNNGGSRGRYFSGRGSFRNE 395
>AT2G03640.2 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr2:1104525-1106418 REVERSE LENGTH=423
Length = 423
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 223/398 (56%), Gaps = 35/398 (8%)
Query: 1 MAATDGAPT--PQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXX 58
M AP+ PQ VGN FV++YY+ L+ +VH+FY E S++SRP DG
Sbjct: 1 MTPESNAPSVDPQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLK 60
Query: 59 EINKKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDK 118
IN +I+S DYKS R+EIL+ADSQ + K GV+ VTG + G D +RKF+QSFFL ++
Sbjct: 61 GINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNG 120
Query: 119 GYFVLNDVFRYV-DEYKSVDIESVPSRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIAE 177
YFVLND FRYV DE+ +E +++ +E ++A EP V I P+ E
Sbjct: 121 SYFVLNDTFRYVSDEF----VEPEATKEVEESQSTNAITAEPANESVEAVIVPT-----E 171
Query: 178 TDASIRKEVSQPLENGKLSV-TEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFA 236
++ K S + NG V EKV+ A++ QE+ PKKSFA
Sbjct: 172 AKTTVTKPAS-AIPNGHAKVPEEKVV----------NENSSLPKAAEAKLQEEVPKKSFA 220
Query: 237 SIVNALNENAAPFHVRTSPM--KPVEQPRVSSKPASEAQAPIADVLLEKNNENAGKAHAI 294
IV +L ++A V+ SP+ KPVE+P + P +A +PI ++ + + +I
Sbjct: 221 LIVQSLAQSAGTLQVKASPVKRKPVEKPVAA--PERKAPSPIRKQASAESIKPQAQGSSI 278
Query: 295 FVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQSAL---- 350
FVANLPM+AT+EQL F FG I+ +GIQVRS ++ +C GFV FE+ ++++
Sbjct: 279 FVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQAHR 338
Query: 351 EAAVILDNRRLSIEERR-ANNDRARYPSGR--GGYRND 385
E+ + + NRR SIEE+R NN S R GY+N+
Sbjct: 339 ESPIRIGNRRASIEEKRGGNNQNGNRVSTRNNSGYKNE 376
>AT2G03640.3 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr2:1104525-1106418 REVERSE LENGTH=454
Length = 454
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 214/378 (56%), Gaps = 32/378 (8%)
Query: 1 MAATDGAPT--PQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXX 58
M AP+ PQ VGN FV++YY+ L+ +VH+FY E S++SRP DG
Sbjct: 1 MTPESNAPSVDPQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLK 60
Query: 59 EINKKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDK 118
IN +I+S DYKS R+EIL+ADSQ + K GV+ VTG + G D +RKF+QSFFL ++
Sbjct: 61 GINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNG 120
Query: 119 GYFVLNDVFRYV-DEYKSVDIESVPSRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIAE 177
YFVLND FRYV DE+ +E +++ +E ++A EP V I P+ E
Sbjct: 121 SYFVLNDTFRYVSDEF----VEPEATKEVEESQSTNAITAEPANESVEAVIVPT-----E 171
Query: 178 TDASIRKEVSQPLENGKLSV-TEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFA 236
++ K S + NG V EKV+ A++ QE+ PKKSFA
Sbjct: 172 AKTTVTKPAS-AIPNGHAKVPEEKVV----------NENSSLPKAAEAKLQEEVPKKSFA 220
Query: 237 SIVNALNENAAPFHVRTSPM--KPVEQPRVSSKPASEAQAPIADVLLEKNNENAGKAHAI 294
IV +L ++A V+ SP+ KPVE+P + P +A +PI ++ + + +I
Sbjct: 221 LIVQSLAQSAGTLQVKASPVKRKPVEKPVAA--PERKAPSPIRKQASAESIKPQAQGSSI 278
Query: 295 FVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQSALEAA- 353
FVANLPM+AT+EQL F FG I+ +GIQVRS ++ +C GFV FE+ ++++ +A
Sbjct: 279 FVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQAHR 338
Query: 354 ---VILDNRRLSIEERRA 368
+ + NRR SIEE+R
Sbjct: 339 ESPIRIGNRRASIEEKRG 356
>AT2G03640.1 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr2:1104525-1106418 REVERSE LENGTH=422
Length = 422
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 223/398 (56%), Gaps = 36/398 (9%)
Query: 1 MAATDGAPT--PQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXX 58
M AP+ PQ VGN FV++YY+ L+ +VH+FY E S++SRP DG
Sbjct: 1 MTPESNAPSVDPQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLK 60
Query: 59 EINKKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDK 118
IN +I+S DYKS R+EIL+ADSQ + K GV+ VTG + G D +RKF+QSFFL ++
Sbjct: 61 GINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNG 120
Query: 119 GYFVLNDVFRYV-DEYKSVDIESVPSRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIAE 177
YFVLND FRYV DE+ +E +++ +E ++A EP V I P+ E
Sbjct: 121 SYFVLNDTFRYVSDEF----VEPEATKEVEESQSTNAIT-EPANESVEAVIVPT-----E 170
Query: 178 TDASIRKEVSQPLENGKLSV-TEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFA 236
++ K S + NG V EKV+ A++ QE+ PKKSFA
Sbjct: 171 AKTTVTKPAS-AIPNGHAKVPEEKVV----------NENSSLPKAAEAKLQEEVPKKSFA 219
Query: 237 SIVNALNENAAPFHVRTSPM--KPVEQPRVSSKPASEAQAPIADVLLEKNNENAGKAHAI 294
IV +L ++A V+ SP+ KPVE+P + P +A +PI ++ + + +I
Sbjct: 220 LIVQSLAQSAGTLQVKASPVKRKPVEKPVAA--PERKAPSPIRKQASAESIKPQAQGSSI 277
Query: 295 FVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQSALEAA- 353
FVANLPM+AT+EQL F FG I+ +GIQVRS ++ +C GFV FE+ ++++ +A
Sbjct: 278 FVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQAHR 337
Query: 354 ---VILDNRRLSIEERR-ANNDRARYPSGR--GGYRND 385
+ + NRR SIEE+R NN S R GY+N+
Sbjct: 338 ESPIRIGNRRASIEEKRGGNNQNGNRVSTRNNSGYKNE 375
>AT5G60980.1 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr5:24543988-24546027 FORWARD LENGTH=459
Length = 459
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 171/409 (41%), Positives = 226/409 (55%), Gaps = 39/409 (9%)
Query: 1 MAATDGAPTP--QMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXX 58
MA + +P+P ++VG AFVEQYY ILH P VHRFY ++S L+RP+ G
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 59 EINKKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDK 118
IN KILS Y+ + EI +AD+Q S++ GVIV VTG LTG DN+++KF+QSFFLAPQDK
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 119 GYFVLNDVFRYVDEYK-SVDIESVPSRDADEITLSDAFAP-EPE---PNHVPEDIPPSQT 173
GYFVLNDVFR+++E + + SVP T D AP EPE +H PE P
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVPING----TTRDVQAPIEPERVVVSHEPEVEPEPVA 176
Query: 174 AIAETDASIRKEVSQPLEN--GKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAP 231
+I E D EV P + G + E + P S Q DAP
Sbjct: 177 SIEEEDLDNVAEVYDPSDKDEGVVVDVEPIEPPTQISHNEIL----------SVPQGDAP 226
Query: 232 KKSFASIVNALNENAAP-FHV-RTSPM-KPVEQPRVSSKPASEAQAPIA---DVLLEKNN 285
K S+ASI+ + + AP HV R P PV Q + A+ + +V +
Sbjct: 227 KHSYASILKQMKSSPAPTTHVARNKPRPAPVNQKLTAPPAEPAARPEASAHENVPNSSHV 286
Query: 286 ENAGKAHAIFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAAS 345
+ H+I+V NLP ++T QLE F FG IK GIQVRSNK QG CFGFVEFE+++
Sbjct: 287 DVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNK-QGFCFGFVEFETSSG 345
Query: 346 MQSALEAA-VILDNRRLSIEERRA--------NNDRARYPSGRGGYRND 385
QSALEA+ V + +R+ +EE++ R RY SGRG +RN+
Sbjct: 346 KQSALEASPVTIGDRQAVVEEKKTNSRGGGNNGGSRGRYFSGRGSFRNE 394
>AT2G03640.4 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr2:1104525-1106418 REVERSE LENGTH=453
Length = 453
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 214/378 (56%), Gaps = 33/378 (8%)
Query: 1 MAATDGAPT--PQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXX 58
M AP+ PQ VGN FV++YY+ L+ +VH+FY E S++SRP DG
Sbjct: 1 MTPESNAPSVDPQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLK 60
Query: 59 EINKKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDK 118
IN +I+S DYKS R+EIL+ADSQ + K GV+ VTG + G D +RKF+QSFFL ++
Sbjct: 61 GINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNG 120
Query: 119 GYFVLNDVFRYV-DEYKSVDIESVPSRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIAE 177
YFVLND FRYV DE+ +E +++ +E ++A EP V I P+ E
Sbjct: 121 SYFVLNDTFRYVSDEF----VEPEATKEVEESQSTNAIT-EPANESVEAVIVPT-----E 170
Query: 178 TDASIRKEVSQPLENGKLSV-TEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFA 236
++ K S + NG V EKV+ A++ QE+ PKKSFA
Sbjct: 171 AKTTVTKPAS-AIPNGHAKVPEEKVV----------NENSSLPKAAEAKLQEEVPKKSFA 219
Query: 237 SIVNALNENAAPFHVRTSPM--KPVEQPRVSSKPASEAQAPIADVLLEKNNENAGKAHAI 294
IV +L ++A V+ SP+ KPVE+P + P +A +PI ++ + + +I
Sbjct: 220 LIVQSLAQSAGTLQVKASPVKRKPVEKPVAA--PERKAPSPIRKQASAESIKPQAQGSSI 277
Query: 295 FVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQSALEAA- 353
FVANLPM+AT+EQL F FG I+ +GIQVRS ++ +C GFV FE+ ++++ +A
Sbjct: 278 FVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQAHR 337
Query: 354 ---VILDNRRLSIEERRA 368
+ + NRR SIEE+R
Sbjct: 338 ESPIRIGNRRASIEEKRG 355
>AT1G69250.1 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr1:26033163-26035301 FORWARD LENGTH=427
Length = 427
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 221/404 (54%), Gaps = 38/404 (9%)
Query: 3 ATDGA-PTPQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXXEIN 61
AT+G P+ Q + FV QYY +L P + R Y + S++SRP+ G IN
Sbjct: 2 ATEGVVPSAQDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAIN 61
Query: 62 KKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDKGYF 121
K ILS D+++ + E+LS DSQ S ++G+ + V G +TG DN +RKF+Q F+LA Q+
Sbjct: 62 KHILSCDFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT-LV 120
Query: 122 VLNDVFRYVDEYKSVDIESVPSRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIAETDAS 181
VLND+ RYVD+ S E+ P EI + E + Q +A + S
Sbjct: 121 VLNDMLRYVDQEDSSTTET-PCEPVTEIVRPADGLKKAEKTEL------KQKNVASVEKS 173
Query: 182 IRKEVSQ---PLENGKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFASI 238
+ V + PL+NGK+ +EK + + D+ Q D K+SFA I
Sbjct: 174 VNAAVEKNAAPLDNGKMKQSEKAV------------ITQKVTEPDAAPQPDGAKRSFADI 221
Query: 239 VNALNENAAPFHVRTSPMKPVEQPRVSSKP--ASEAQAP-IADVLLEKNNENAGK--AHA 293
V ++ +NAAPF V++ PV++P+ +P A+ Q P ++KN++ + +
Sbjct: 222 VGSMAKNAAPFQVKSPVQAPVQKPKYVGQPRAAAAPQKPAYVSKSIKKNDQKVIEVPGTS 281
Query: 294 IFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGS--CFGFVEFESAASMQSALE 351
IFVANLP+NA QL F +FGPIK NGIQVRS++ + CFGF+ FE+ AS+QS L+
Sbjct: 282 IFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSRGNANPVCFGFISFETVASVQSVLQ 341
Query: 352 AA----VILDNRRLSIEERRANNDRARYPSG--RGGYRNDRNDS 389
AA +L +R+L ++E+ + D ++ PSG +GG +N S
Sbjct: 342 AAKNTPFMLADRKLRVKEKEVDYDGSK-PSGKTKGGSNKTQNGS 384
>AT1G69250.2 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr1:26033163-26035007 FORWARD LENGTH=389
Length = 389
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 180/336 (53%), Gaps = 29/336 (8%)
Query: 3 ATDGA-PTPQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXXEIN 61
AT+G P+ Q + FV QYY +L P + R Y + S++SRP+ G IN
Sbjct: 2 ATEGVVPSAQDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAIN 61
Query: 62 KKILSQDYKSFRVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDKGYF 121
K ILS D+++ + E+LS DSQ S ++G+ + V G +TG DN +RKF+Q F+LA Q+
Sbjct: 62 KHILSCDFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT-LV 120
Query: 122 VLNDVFRYVDEYKSVDIESVPSRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIAETDAS 181
VLND+ RYVD+ S E+ P EI + E + Q +A + S
Sbjct: 121 VLNDMLRYVDQEDSSTTET-PCEPVTEIVRPADGLKKAEKTEL------KQKNVASVEKS 173
Query: 182 IRKEVSQ---PLENGKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFASI 238
+ V + PL+NGK+ +EK + + D+ Q D K+SFA I
Sbjct: 174 VNAAVEKNAAPLDNGKMKQSEKAV------------ITQKVTEPDAAPQPDGAKRSFADI 221
Query: 239 VNALNENAAPFHVRTSPMKPVEQPRVSSKP--ASEAQAP-IADVLLEKNNENAGKA--HA 293
V ++ +NAAPF V++ PV++P+ +P A+ Q P ++KN++ + +
Sbjct: 222 VGSMAKNAAPFQVKSPVQAPVQKPKYVGQPRAAAAPQKPAYVSKSIKKNDQKVIEVPGTS 281
Query: 294 IFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNK 329
IFVANLP+NA QL F +FGPIK NGIQVRS++
Sbjct: 282 IFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSR 317
>AT5G48650.1 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr5:19727279-19729533 FORWARD LENGTH=458
Length = 458
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 199/419 (47%), Gaps = 48/419 (11%)
Query: 2 AATDGAPTPQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXXEIN 61
AAT P VG+AFV QYY I + PE + RFY E S + R +DG I+
Sbjct: 5 AATKRVVDPLTVGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGIS 64
Query: 62 KKILSQDYKSFR-VEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDKGY 120
+++ Y EI S D+Q S+ G ++ VTG T + +RKF Q+FFLAPQ+KG+
Sbjct: 65 EELKRLTYGDCNSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKGF 124
Query: 121 FVLNDVFRYVDEYKSVDIESVP-SRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIAETD 179
FVLND+ R+V++ ++VP + D + ++ ++ P + + S+ A +
Sbjct: 125 FVLNDILRFVNDDAK---DNVPETIDGEVVSGINSTTPT-----IINGMKGSEQAACVSV 176
Query: 180 ASIRKEVSQPL--ENGKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQE---DAPKKS 234
+ KEVS+PL EN K +V I + + + + DAPKKS
Sbjct: 177 NPVCKEVSKPLDNENAKDNVLVPEIANEVARTEITCKEVADDSQKNYDPDDGLADAPKKS 236
Query: 235 FASIVNALN--------------------ENAAPFHVRTSPMKPVEQPRVSSKPASEAQA 274
+AS++ E+ AP T + + + SS P +Q
Sbjct: 237 YASVLKVTKDKFGVPAVSLPSPKKIPKDQEHQAPSDPSTGQILKDQGQQASSDP---SQV 293
Query: 275 PIADVLLEK--------NNENAGKAHAIFVANLPMNATVEQLERAFVEFGPIKTNGIQVR 326
+D + E N E + +I+V +LP NA ++ LE F +FG I GIQV
Sbjct: 294 IESDTVSESVDASENGHNQEAVAEGTSIYVRHLPFNANIDMLEAEFKQFGAITNGGIQVI 353
Query: 327 SNKQQGSCFGFVEFESAASMQSALEAA-VILDNRRLSIEERRANNDRARYPSGRGGYRN 384
+ + G +GFVEFE A + A+EA+ V + R +EE+ + + R + +G GY N
Sbjct: 354 NQRGLGYPYGFVEFEEADAAHRAIEASPVKIGGLRAFVEEKLSTS-RGKRGNGNVGYGN 411
>AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing protein
| chr3:2300579-2308305 REVERSE LENGTH=1294
Length = 1294
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 163/378 (43%), Gaps = 55/378 (14%)
Query: 13 VGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXXEINKKILSQDYKSF 72
VG+ F QYY+ L + PE +++ Y + S +SRP DG ++K + + SF
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFT----LSKDLKWRSPGSF 336
Query: 73 -RVEILSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDKGYFVLNDVFRYVD 131
V+I S SQ S K+G++V V G LT + R F Q FFL PQ+KGY V D+FR+
Sbjct: 337 DSVKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQEKGYIVCTDMFRF-- 394
Query: 132 EYKSVDI---------------ESVPSRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIA 176
VDI E VP + + +S EPNH +++ P + +
Sbjct: 395 ----VDIPEANAAIPPANDVIEEKVPETEGAALRVS-------EPNHGFDNV-PKLSCAS 442
Query: 177 ETDASIRKEVSQPLENGKLSVTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFA 236
E A K++ PL+ ++ E K ++
Sbjct: 443 EGAAICAKKL--PLD-ATIAFVENAFKQFGEIRRGGVEVRI--------NWHCTGKYAYV 491
Query: 237 SIVNALNENAAPFHVRTSPMKPVEQPRVSSKPASEAQAPIADVLLEKNNENAGKAHAIF- 295
A N A + SP+ K + + AD + N N+ + AI
Sbjct: 492 EFEEAEAANRA---IMASPISIDGYRTYVEKKYAYNKNIKADAGADTGNGNSQDSQAITE 548
Query: 296 -----VANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQSAL 350
V +LP NATV +E F +FGPIK I+V + + FVEFE A + + A+
Sbjct: 549 DAHIRVKDLPPNATVALVESVFKQFGPIKKGRIRVINPANSNYWYAFVEFEEADAAKRAI 608
Query: 351 EAAVI-LDNRRLSIEERR 367
+A+ + +D +E+++
Sbjct: 609 QASPLNVDGHTTYVEQKQ 626
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 151/364 (41%), Gaps = 76/364 (20%)
Query: 17 FVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXXEINKKILSQDYKSFRVEI 76
F E YY+ L + PE + +Y + S ++RP DG I + VE+
Sbjct: 948 FSEHYYNNLQNSPEILPGYYKDVSKITRPGLDGTMRSSTLPDIIEDLDMLSPGGFDSVEV 1007
Query: 77 LSADSQPSYKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDKGYFVLNDVFRYVDEYKSV 136
S SQ S+ +G+ VAV G T + R F Q+F APQ+KG FV D+F+
Sbjct: 1008 TSVMSQDSHDKGIRVAVDGYFTFNERPARNFTQNFTFAPQEKGLFVSTDMFK-------- 1059
Query: 137 DIESVPSRDADEITLSDAFAPEPEPNHVPEDIPPSQTAIAETDASIRKEVSQPLENGKLS 196
F PE N IPP+ A A K + PL N ++
Sbjct: 1060 ------------------FVGIPEANAT---IPPANNA-----AICVKNL--PL-NATIA 1090
Query: 197 VTEKVIPXXXXXXXXXXXXXXXXXKADSNTQEDAPKKSFA-SIVNALNENAAPFHVRTSP 255
+ E + E K+SF+ V ENAA ++ SP
Sbjct: 1091 LVENAF--------------KQFGEIRRGGVEVRNKRSFSYGFVEFKEENAAQRAIKASP 1136
Query: 256 MKP------VEQPRV---------SSKPA----SEAQAPIADVLLEKNNENAGKAHAIFV 296
+ VE+ R S+ P SE + D + NEN + A++
Sbjct: 1137 VTIDLRSVYVEKKRPDYIRYWDTPSTGPGIIYRSEGMSVTKDYGNKGGNENNQEPRALYA 1196
Query: 297 A----NLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQSALEA 352
A NLP N T + +E AF +FGPIK G+QV SN+ G+ FG V+F AA+ + A+
Sbjct: 1197 AVHVKNLPPNVTTDWVENAFKQFGPIKRGGVQV-SNRGVGNWFGNVKFVHAAAAERAVNP 1255
Query: 353 AVIL 356
V+L
Sbjct: 1256 QVLL 1259
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 293 AIFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQSALEA 352
AI V NLP+NAT+ +E AF +FG I+ G++VR NK+ S +GFVEF+ + Q A++A
Sbjct: 1077 AICVKNLPLNATIALVENAFKQFGEIRRGGVEVR-NKRSFS-YGFVEFKEENAAQRAIKA 1134
Query: 353 A-VILDNRRLSIEERRANNDRARY 375
+ V +D R + +E++R D RY
Sbjct: 1135 SPVTIDLRSVYVEKKRP--DYIRY 1156
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 288 AGKAHAIFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQQGSCFGFVEFESAASMQ 347
A + AI LP++AT+ +E AF +FG I+ G++VR N + +VEFE A +
Sbjct: 441 ASEGAAICAKKLPLDATIAFVENAFKQFGEIRRGGVEVRINWHCTGKYAYVEFEEAEAAN 500
Query: 348 SALEAAVI-LDNRRLSIEERRANNDRARYPSG 378
A+ A+ I +D R +E++ A N + +G
Sbjct: 501 RAIMASPISIDGYRTYVEKKYAYNKNIKADAG 532
>AT5G43960.1 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr5:17689154-17691653 REVERSE LENGTH=450
Length = 450
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 8 PTPQMVGNAFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXXXXEINKKILSQ 67
P VG+ FV QYY +L P+ +H+FY E S R + D I+ ++S
Sbjct: 6 PGATQVGSYFVGQYYQVLQQQPDLIHQFYSEPSRAIRIDGDSTETANSLL-HIHNMVMSL 64
Query: 68 DYKSFRVEILSADSQPSYKEGVIVAVTGCL-TGTDNMKRKFAQSFFLAPQDKGYFVLNDV 126
++ + +E+ + +S S++ GV+V V+G + T + +R F Q+FFLAPQ+KGYFVL+DV
Sbjct: 65 NFTA--IEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFVLSDV 122
Query: 127 FRYVDE 132
F +VDE
Sbjct: 123 FLFVDE 128
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 293 AIFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQ-QGSCFGFVEFESAASMQSALE 351
+++V NLP + + ++E F FG IK +G+ +R+ K G C+ FVEFE S+++A++
Sbjct: 317 SVYVRNLPSDISASEIEEEFKNFGTIKPDGVFLRTRKDVMGVCYAFVEFEDMTSVENAIK 376
Query: 352 AA-VILDNRRLSIEERRAN 369
A+ + L R++ IEERR N
Sbjct: 377 ASPIYLGGRQVYIEERRPN 395
>AT3G55540.1 | Symbols: | nuclear transport factor 2 (NTF2) family
protein | chr3:20598218-20599614 FORWARD LENGTH=334
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 9 TPQMVGNAFVEQYYSILHHDPEQVHR-FYHETSILSRPEEDGXXXXXXXXXEINKKILSQ 67
T + + N F++ Y+ L PE V +Y + S+++RP DG I ++I+S
Sbjct: 28 TSEALANCFLQSYFLNLGVYPEVVQMMWYADDSVMTRPGPDGTMMSFTSPEAIQEQIVSC 87
Query: 68 DYKSFRVEILSADSQ---PSYKEGVIVAVTGCLTGTDN-MKRKFAQSFFLA-PQDKGYFV 122
DY+ +++S +Q S ++G + VTG LT D ++R+F QS +LA QD+ Y +
Sbjct: 88 DYEGASFDVMSFAAQSCNTSSEDGAFIMVTGFLTCKDKQVRRRFVQSLYLARRQDRSYAI 147
Query: 123 LNDVFRYVD 131
+ND RY+D
Sbjct: 148 VNDFLRYID 156
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 16 AFVEQYYSILHHDPEQVHRFYHETSILSRPEEDGXXXXXXX--XXEINKKILSQDYKSFR 73
FV+ YY + E++ Y SI+SRP INK++ ++ ++
Sbjct: 169 GFVKVYYELPMR--EELGLMYVNESIMSRPTSTSGRTMVEMPGLDAINKRVSNEHKRASN 226
Query: 74 VEILSADSQPS--YKEGVIVAVTGCLTGTDNMKRKFAQSFFLAPQDKG-YFVLNDVFRYV 130
+ S D Q S +K+ + + V G +T D +RKF Q F++ G Y + ND+ RYV
Sbjct: 227 FILNSVDYQISRSFKDRMFIMVCGFVTLDDKTERKFLQFFYVTRCHNGSYVIYNDILRYV 286
Query: 131 D 131
D
Sbjct: 287 D 287
>AT5G43960.2 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein with RNA binding (RRM-RBD-RNP motifs) domain |
chr5:17689154-17691220 REVERSE LENGTH=391
Length = 391
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 293 AIFVANLPMNATVEQLERAFVEFGPIKTNGIQVRSNKQ-QGSCFGFVEFESAASMQSALE 351
+++V NLP + + ++E F FG IK +G+ +R+ K G C+ FVEFE S+++A++
Sbjct: 258 SVYVRNLPSDISASEIEEEFKNFGTIKPDGVFLRTRKDVMGVCYAFVEFEDMTSVENAIK 317
Query: 352 AA-VILDNRRLSIEERRAN 369
A+ + L R++ IEERR N
Sbjct: 318 ASPIYLGGRQVYIEERRPN 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 26/29 (89%)
Query: 104 KRKFAQSFFLAPQDKGYFVLNDVFRYVDE 132
+R F Q+FFLAPQ+KGYFVL+DVF +VDE
Sbjct: 41 RRSFVQTFFLAPQEKGYFVLSDVFLFVDE 69