Miyakogusa Predicted Gene

Lj4g3v0669580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0669580.1 Non Chatacterized Hit- tr|A5AU61|A5AU61_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.85,2e-17,coiled-coil,NULL; seg,NULL,CUFF.47881.1
         (231 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26410.1 | Symbols:  | Uncharacterised conserved protein UCP0...   246   9e-66
AT2G45060.1 | Symbols:  | Uncharacterised conserved protein UCP0...   125   2e-29

>AT4G26410.1 | Symbols:  | Uncharacterised conserved protein
           UCP022280 | chr4:13346760-13348791 FORWARD LENGTH=263
          Length = 263

 Score =  246 bits (628), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 122/203 (60%), Positives = 168/203 (82%)

Query: 29  SAVQSARTVQHNSSTQFRTFQNFLPKAVSQYRTYEDAFFNKVKDGLIVAKEHQALGVGFA 88
           +A++SAR+++ NS++QFR+ Q+F+P A++QY+TYE+AFF+KV D LI AKEH A  +G  
Sbjct: 61  TAMRSARSLRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELIYAKEHPAAAIGIG 120

Query: 89  VSAALLAMRAPRRFLFRNTLGRFQSEEARYASAEKNVKDLNLSVDLLKKESIKLLERTTL 148
           V+A+L+ MR PRRFLFRNTLGRFQSEEA++  AEK+V++LN+SVDL+KKES KLLERT L
Sbjct: 121 VAASLVLMRGPRRFLFRNTLGRFQSEEAQFLKAEKHVQELNMSVDLMKKESRKLLERTAL 180

Query: 149 AEKEMKYGHTELTITGAQLQRLAKSSYKVEAQAADLIDRLRHIPSREALTLRAEVASLAS 208
           AEK+MK G +EL  +G  + RLAKS +K E +AADL+D LR IP R+A+ LRAEVAS+ S
Sbjct: 181 AEKDMKRGLSELMNSGNDIHRLAKSVHKAECEAADLMDGLRQIPGRDAIKLRAEVASMTS 240

Query: 209 TLKRQRSAMDKRIMKISELGIAV 231
            L+++R A++KRIM +S+LG++V
Sbjct: 241 LLRQKRIALNKRIMGMSDLGVSV 263


>AT2G45060.1 | Symbols:  | Uncharacterised conserved protein
           UCP022280 | chr2:18584674-18586688 REVERSE LENGTH=272
          Length = 272

 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 105/175 (60%)

Query: 57  SQYRTYEDAFFNKVKDGLIVAKEHQALGVGFAVSAALLAMRAPRRFLFRNTLGRFQSEEA 116
           S+Y  YE   F K+KDG+ VA  H  +    A    + A++  RRF++ NT+  F SEEA
Sbjct: 98  SEYNVYEQMVFGKIKDGVNVAASHPLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEEA 157

Query: 117 RYASAEKNVKDLNLSVDLLKKESIKLLERTTLAEKEMKYGHTELTITGAQLQRLAKSSYK 176
             + A+  VK+L  S+D LK ES KL    T+AE+E   G  +L   G Q++    S+YK
Sbjct: 158 LLSRADLKVKELRQSMDRLKAESEKLERVATVAEEEFIRGRMKLRQAGKQIRGAISSAYK 217

Query: 177 VEAQAADLIDRLRHIPSREALTLRAEVASLASTLKRQRSAMDKRIMKISELGIAV 231
           +E QAA L D L+ +P+REA   R +++  AS +K++R+A+ K + KIS  GI+V
Sbjct: 218 IEKQAAGLKDVLKELPTREASRFRTQISKRASEVKQERNALTKEVNKISNYGISV 272