Miyakogusa Predicted Gene

Lj4g3v0668030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0668030.1 Non Chatacterized Hit- tr|H9W8J6|H9W8J6_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=U,60.56,4e-16,O-FucT,GDP-fucose protein
O-fucosyltransferase,CUFF.47834.1
         (407 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05320.1 | Symbols:  | O-fucosyltransferase family protein | ...   549   e-156

>AT3G05320.1 | Symbols:  | O-fucosyltransferase family protein |
           chr3:1513558-1514895 REVERSE LENGTH=445
          Length = 445

 Score =  549 bits (1415), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 273/427 (63%), Positives = 333/427 (77%), Gaps = 33/427 (7%)

Query: 12  STACKCVLLFVAVLILRTLFLPHSPGFEWSNIVYVRNQ----SPSVGSGIRQDKFLEVPQ 67
           S ACKC++L    L  R L L +SP    SN +  R++    S S G GIR DKFLEVPQ
Sbjct: 16  SVACKCLVLVGIALFYRALLLSYSPRNALSNSLLFRDRHMSDSSSTG-GIRTDKFLEVPQ 74

Query: 68  IVWGLNNQKIAFARACLTARMLNRTLLMPSLSASLFYKEIDLLQPISFDKVFQFDKFNAL 127
           IVWGLNNQKIAFARACLTARM+NRTLLMPSLSASLFYKE+D L+PI FDKVFQF++FN+L
Sbjct: 75  IVWGLNNQKIAFARACLTARMMNRTLLMPSLSASLFYKEVDKLRPIPFDKVFQFERFNSL 134

Query: 128 CSGFVQLGRYSDLSNATRVLEMQKGSGRKWTMERDLDQLEQHSRVSSFDDHETIRIVGKN 187
           CSGFV+L R+SD+ N  +V +++KGSGR+WT+ERDL+ L+Q +R  S D+ E IR++GKN
Sbjct: 135 CSGFVRLSRFSDVKNRAQVFDLEKGSGRRWTVERDLEHLKQSARNESIDEFEVIRLIGKN 194

Query: 188 PFLWHDHWPVKDYAKVFECLVLVDEISQEADRVVSRIRGSTE--------------PLPY 233
           PFLWHDHWPV+DYAKVFEC+V+VDEIS+EAD+VV +IR + E              P+P+
Sbjct: 195 PFLWHDHWPVEDYAKVFECMVVVDEISREADKVVMKIREAGEAERAKLASKTEILGPVPF 254

Query: 234 VAVHMRVEIDWMIHCKKLEQRLNTNQICSSEKEIKERVRNIADLKRPVVVYLAVADKLL- 292
           VAVHMR+EIDWMIHCKKLEQR   ++ICSS++EI +RV NI+ LK P V+YLAVAD LL 
Sbjct: 255 VAVHMRIEIDWMIHCKKLEQRKKISEICSSKREILDRVGNISGLKTPTVLYLAVADTLLE 314

Query: 293 ---KNSSILEGWEEGLVPFEKKKLGV-DEIYRKYPYLIQSAIDYEVCLRADIFVGNSFST 348
              ++SS+L GW +GL+PFEKKKLGV +EIY KY YLIQSAIDYEVCLRAD+FVGNSFST
Sbjct: 315 EKEEDSSVLSGWRDGLIPFEKKKLGVKEEIYGKYSYLIQSAIDYEVCLRADVFVGNSFST 374

Query: 349 FSSLVVLERTQKMIR--------NVDVRWPSYAYNVPGELNG-PMRWVTNMSDSNLQAIS 399
           FSSL+VLERTQK  R        +   +W SYAYN+ GE NG P RW+TNM+ S+LQAIS
Sbjct: 375 FSSLIVLERTQKARRLGFMSSCKDGGNKWRSYAYNLAGESNGVPRRWMTNMTHSSLQAIS 434

Query: 400 YGTNHIS 406
           YG+N +S
Sbjct: 435 YGSNSVS 441