Miyakogusa Predicted Gene
- Lj4g3v0667970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0667970.1 Non Chatacterized Hit- tr|I3SIX3|I3SIX3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,96.23,0,SYNAPTOBREVIN,Synaptobrevin; V_SNARE,Synaptobrevin;
seg,NULL; Synaptobrevin,Synaptobrevin; no descri,CUFF.47835.1
(151 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G04750.2 | Symbols: VAMP7B, VAMP721, ATVAMP721, AT VAMP7B | v... 187 2e-48
AT1G04750.1 | Symbols: VAMP7B, VAMP721, ATVAMP721, AT VAMP7B | v... 187 2e-48
AT2G33120.2 | Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-... 186 7e-48
AT2G33120.1 | Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-... 185 9e-48
AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated m... 183 3e-47
AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated m... 180 4e-46
AT4G15780.1 | Symbols: ATVAMP724, VAMP724 | vesicle-associated m... 146 6e-36
AT3G54300.2 | Symbols: ATVAMP727, VAMP727 | vesicle-associated m... 145 8e-36
AT3G54300.1 | Symbols: ATVAMP727, VAMP727 | vesicle-associated m... 145 8e-36
AT2G33110.1 | Symbols: ATVAMP723, VAMP723 | vesicle-associated m... 120 3e-28
AT2G33120.3 | Symbols: SAR1 | synaptobrevin-related protein 1 | ... 114 3e-26
AT3G24890.2 | Symbols: VAMP728 | vesicle-associated membrane pro... 94 5e-20
AT5G11150.1 | Symbols: ATVAMP713, VAMP713 | vesicle-associated m... 86 1e-17
AT5G22360.1 | Symbols: ATVAMP714, VAMP714 | vesicle-associated m... 85 2e-17
AT4G32150.1 | Symbols: VAMP711, ATVAMP711 | vesicle-associated m... 81 2e-16
AT2G25340.1 | Symbols: ATVAMP712, VAMP712 | vesicle-associated m... 72 1e-13
AT3G24890.1 | Symbols: ATVAMP728, VAMP728 | vesicle-associated m... 69 1e-12
>AT1G04750.2 | Symbols: VAMP7B, VAMP721, ATVAMP721, AT VAMP7B |
vesicle-associated membrane protein 721 |
chr1:1331857-1333426 REVERSE LENGTH=181
Length = 181
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/102 (86%), Positives = 95/102 (93%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ ATA NSLNKEFG KLKEHMQYC+DHP+E+SKLAKVKAQVSEVKGVMMENIEKVL
Sbjct: 56 GGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVL 115
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGEKIELLVDKTENL QAQDFR +GT++RRKMWLQNMKIK
Sbjct: 116 DRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIK 157
>AT1G04750.1 | Symbols: VAMP7B, VAMP721, ATVAMP721, AT VAMP7B |
vesicle-associated membrane protein 721 |
chr1:1331857-1333426 REVERSE LENGTH=219
Length = 219
Score = 187 bits (475), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/102 (86%), Positives = 95/102 (93%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ ATA NSLNKEFG KLKEHMQYC+DHP+E+SKLAKVKAQVSEVKGVMMENIEKVL
Sbjct: 94 GGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVL 153
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGEKIELLVDKTENL QAQDFR +GT++RRKMWLQNMKIK
Sbjct: 154 DRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIK 195
>AT2G33120.2 | Symbols: SAR1, VAMP722, ATVAMP722 |
synaptobrevin-related protein 1 | chr2:14043785-14045337
REVERSE LENGTH=229
Length = 229
Score = 186 bits (471), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 87/102 (85%), Positives = 93/102 (91%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ ATA NSLNKEFG KLKEHMQYC+DHP+E+SKLAKVKAQVSEVKGVMMENIEKVL
Sbjct: 102 GGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVL 161
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGEKIELLVDKTENL QAQDFR GT++RRKMW QNMKIK
Sbjct: 162 DRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIK 203
>AT2G33120.1 | Symbols: SAR1, VAMP722, ATVAMP722 |
synaptobrevin-related protein 1 | chr2:14043785-14045337
REVERSE LENGTH=221
Length = 221
Score = 185 bits (470), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 87/102 (85%), Positives = 93/102 (91%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ ATA NSLNKEFG KLKEHMQYC+DHP+E+SKLAKVKAQVSEVKGVMMENIEKVL
Sbjct: 94 GGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVL 153
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGEKIELLVDKTENL QAQDFR GT++RRKMW QNMKIK
Sbjct: 154 DRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIK 195
>AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated
membrane protein 725 | chr2:13857941-13859346 FORWARD
LENGTH=285
Length = 285
Score = 183 bits (465), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/102 (84%), Positives = 92/102 (90%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ TA NSLN+EFG KLKEHMQYCVDHP+E+SKLAKVKAQV+EVKGVMMENIEKVL
Sbjct: 159 GGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVL 218
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGEKIELLVDKTENL QAQDFR GTKIRRKMW +NMKIK
Sbjct: 219 DRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIK 260
>AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated
membrane protein 726 | chr1:1334760-1336070 FORWARD
LENGTH=220
Length = 220
Score = 180 bits (456), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 83/102 (81%), Positives = 92/102 (90%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ +TA NSLNKEFG KLKEHMQYC DHPEE+SKL+KVKAQV+EVKGVMMENIEKVL
Sbjct: 94 GGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVL 153
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGEKIELLVDKTENL QAQDFR GTK++RK+W +NMKIK
Sbjct: 154 DRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIK 195
>AT4G15780.1 | Symbols: ATVAMP724, VAMP724 | vesicle-associated
membrane protein 724 | chr4:8980081-8981697 REVERSE
LENGTH=222
Length = 222
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 82/102 (80%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ +TA SLNKEFGP +KEHM Y VDH EE+ KL KVKAQVSEVK +M+ENI+K +
Sbjct: 95 GGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAI 154
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGE + +L DKTENL QA++++ GT++RRK+W QNMKIK
Sbjct: 155 DRGENLTVLTDKTENLRSQAREYKKQGTQVRRKLWYQNMKIK 196
>AT3G54300.2 | Symbols: ATVAMP727, VAMP727 | vesicle-associated
membrane protein 727 | chr3:20108355-20110127 REVERSE
LENGTH=240
Length = 240
Score = 145 bits (367), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 86/101 (85%), Gaps = 2/101 (1%)
Query: 29 GGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLD 88
G R + A +L++EFGP LKEHMQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLD
Sbjct: 116 GDRFSVAY--NLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLD 173
Query: 89 RGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
RGEKIELLVDKTENL QA F+ G ++RRKMWLQ++++K
Sbjct: 174 RGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMK 214
>AT3G54300.1 | Symbols: ATVAMP727, VAMP727 | vesicle-associated
membrane protein 727 | chr3:20108355-20110127 REVERSE
LENGTH=240
Length = 240
Score = 145 bits (367), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 86/101 (85%), Gaps = 2/101 (1%)
Query: 29 GGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLD 88
G R + A +L++EFGP LKEHMQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLD
Sbjct: 116 GDRFSVAY--NLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLD 173
Query: 89 RGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
RGEKIELLVDKTENL QA F+ G ++RRKMWLQ++++K
Sbjct: 174 RGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMK 214
>AT2G33110.1 | Symbols: ATVAMP723, VAMP723 | vesicle-associated
membrane protein 723 | chr2:14041297-14042892 REVERSE
LENGTH=217
Length = 217
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 71/102 (69%), Gaps = 4/102 (3%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GG + AT NSLNKEFG LKEHMQYC+DHP+E+S LAK KAQVSEVK +MMENIEKVL
Sbjct: 94 GGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVL 153
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
RG E+L Q Q F T+++RK W QNMKIK
Sbjct: 154 ARGVICEMLGSS----ESQPQAFYIKRTQMKRKKWFQNMKIK 191
>AT2G33120.3 | Symbols: SAR1 | synaptobrevin-related protein 1 |
chr2:14043785-14045186 REVERSE LENGTH=139
Length = 139
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 59/68 (86%)
Query: 62 VSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKM 121
+S VKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL QAQDFR GT++RRKM
Sbjct: 46 ISTRDMVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKM 105
Query: 122 WLQNMKIK 129
W QNMKIK
Sbjct: 106 WFQNMKIK 113
>AT3G24890.2 | Symbols: VAMP728 | vesicle-associated membrane
protein 728 | chr3:9098179-9098756 FORWARD LENGTH=124
Length = 124
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 6/89 (6%)
Query: 47 KLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVD---KTENL 103
+L++ + + HPEE+SKLAKVKA V+++KGVMMENIEK LDR EKI++LVD K NL
Sbjct: 14 QLEQRVLVLLAHPEEISKLAKVKALVTKMKGVMMENIEKALDRSEKIKILVDLRSKYSNL 73
Query: 104 ---HHQAQDFRNSGTKIRRKMWLQNMKIK 129
+ +D GTKI RKMW QNMK K
Sbjct: 74 PFPSYGQEDIITPGTKITRKMWFQNMKFK 102
>AT5G11150.1 | Symbols: ATVAMP713, VAMP713 | vesicle-associated
membrane protein 713 | chr5:3546625-3547844 REVERSE
LENGTH=221
Length = 221
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 34 TAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 93
+A S+N EF L + M++ + P +++++K ++S+V+ VM+ENI+KVLDRGE++
Sbjct: 98 SAQAYSMNDEFSRVLSQQMEFYSNDPN-ADRMSRIKGEMSQVRNVMIENIDKVLDRGERL 156
Query: 94 ELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKI 128
ELLVDKTEN+ FR + R MW +N+K+
Sbjct: 157 ELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKL 191
>AT5G22360.1 | Symbols: ATVAMP714, VAMP714 | vesicle-associated
membrane protein 714 | chr5:7404379-7405654 REVERSE
LENGTH=221
Length = 221
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 30 GRPATAAP-NSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLD 88
G+ A AP ++N EF L + M++ +P V L +V+ +VSE++ VM+ENIEK+++
Sbjct: 93 GKVAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIME 151
Query: 89 RGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKI 128
RG++IELLVDKT + + FR ++RR +W++N K+
Sbjct: 152 RGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKL 191
>AT4G32150.1 | Symbols: VAMP711, ATVAMP711 | vesicle-associated
membrane protein 711 | chr4:15526407-15527651 REVERSE
LENGTH=219
Length = 219
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 34 TAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 93
TA ++N+EF L + + Y + P ++ ++K ++++V+GVM+ENI+KVLDRGE++
Sbjct: 97 TALAYAMNEEFSRVLSQQIDYYSNDPN-ADRINRIKGEMNQVRGVMIENIDKVLDRGERL 155
Query: 94 ELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMK 127
ELLVDKT N+ FR + R +W +N K
Sbjct: 156 ELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCK 189
>AT2G25340.1 | Symbols: ATVAMP712, VAMP712 | vesicle-associated
membrane protein 712 | chr2:10792664-10793832 REVERSE
LENGTH=219
Length = 219
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 34 TAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 93
+A ++N EF L + ++Y + P ++++K ++++V+ VM+ENI+ +LDRGE++
Sbjct: 97 SAQAYAMNDEFSRVLNQQIEYYSNDPN-ADTISRIKGEMNQVRDVMIENIDNILDRGERL 155
Query: 94 ELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMK 127
ELLVDKT N+ FR + +W +N K
Sbjct: 156 ELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCK 189
>AT3G24890.1 | Symbols: ATVAMP728, VAMP728 | vesicle-associated
membrane protein 728 | chr3:9098179-9098634 FORWARD
LENGTH=74
Length = 74
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 44 FGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVD 98
+L++ + + HPEE+SKLAKVKA V+++KGVMMENIEK LDR EKI++LVD
Sbjct: 11 LTQQLEQRVLVLLAHPEEISKLAKVKALVTKMKGVMMENIEKALDRSEKIKILVD 65