Miyakogusa Predicted Gene

Lj4g3v0654490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0654490.1 tr|Q1J1H3|Q1J1H3_DEIGD RbsK family ribokinase,
containing DNA-binding HTH domain OS=Deinococcus
geot,35.47,1e-18,Ribokinase-like,NULL; no description,NULL; seg,NULL;
PFKB_KINASES_1,Carbohydrate/puine kinase, PfkB,,CUFF.47798.1
         (183 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49350.1 | Symbols:  | pfkB-like carbohydrate kinase family p...   194   4e-50

>AT1G49350.1 | Symbols:  | pfkB-like carbohydrate kinase family
           protein | chr1:18265070-18267034 FORWARD LENGTH=378
          Length = 378

 Score =  194 bits (492), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 122/179 (68%), Gaps = 3/179 (1%)

Query: 5   EAVIIGGMVLDIHAIPSIHANPGTTTPGKVYYFRGGVARNIAECMSKLGAKPFMISAIGS 64
           E VIIG ++LD+HA PS     GTT PG+V +  GGVARN+A+C+ KLG  PFMI  +G 
Sbjct: 2   EPVIIGALILDVHAKPSTTPISGTTVPGQVLFAPGGVARNVADCIFKLGITPFMIGTLGL 61

Query: 65  DMAGNLLWEHWKSADLSTEGILKDKDIDTPVVCNIFDVNGXXXXXXXXXXXXXKCLTPDW 124
           D   N+L + WK   LS +GIL+ +DI TP+V  ++D NG               LTP+W
Sbjct: 62  DGPANVLLKEWK---LSMKGILRREDISTPIVSLVYDTNGEVAAGVAGVDAVENFLTPEW 118

Query: 125 ILHFKHTLLSAPMLMVDANLSCTSLEASCKMAADTGCPVWFEPVSVTKSRRITSIAKYV 183
           I  F++ + SA +LMVDANLS  +LEASCK+AA++  PVWFEPVSVTKS+RI SIAKYV
Sbjct: 119 IQRFEYNISSARLLMVDANLSSLALEASCKLAAESSVPVWFEPVSVTKSQRIASIAKYV 177