Miyakogusa Predicted Gene
- Lj4g3v0654120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0654120.1 tr|G7LDC0|G7LDC0_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g1,29,2e-17,TPR-like,NULL; no
description,Tetratricopeptide-like helical; PPR: pentatricopeptide
repeat domain,P,CUFF.47783.1
(502 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 347 1e-95
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 4e-95
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 4e-95
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 2e-94
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 340 2e-93
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 3e-93
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 2e-92
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 5e-92
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 335 6e-92
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 2e-90
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 1e-87
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 2e-82
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 3e-82
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 8e-82
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 3e-79
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 289 3e-78
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 288 5e-78
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 283 1e-76
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 1e-75
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 1e-75
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 277 2e-74
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 4e-74
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 4e-72
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 9e-71
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 9e-66
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 2e-62
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 9e-62
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 232 5e-61
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 228 8e-60
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 5e-57
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 7e-57
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 9e-57
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 216 3e-56
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 212 4e-55
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 1e-53
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 1e-52
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 7e-52
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 197 2e-50
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 6e-50
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 8e-50
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 9e-50
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 7e-49
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 189 5e-48
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 7e-48
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 9e-48
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 186 2e-47
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 186 3e-47
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 7e-46
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 1e-45
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 4e-45
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 9e-45
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 170 3e-42
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 168 6e-42
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 167 1e-41
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 165 7e-41
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 162 4e-40
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 4e-39
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 3e-37
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 152 8e-37
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 3e-34
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 5e-33
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 138 7e-33
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 137 2e-32
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 136 3e-32
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 6e-32
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 8e-32
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 133 2e-31
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 129 6e-30
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 126 3e-29
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 123 3e-28
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 4e-28
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 122 5e-28
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 121 1e-27
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 120 2e-27
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 5e-27
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 115 7e-26
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 115 7e-26
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 114 2e-25
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 113 2e-25
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 113 3e-25
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 112 4e-25
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 112 7e-25
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 112 9e-25
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 111 1e-24
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 105 7e-23
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 104 1e-22
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 102 7e-22
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 9e-22
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 101 1e-21
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 98 1e-20
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 97 2e-20
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 97 3e-20
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 96 5e-20
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 96 5e-20
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 96 5e-20
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 96 7e-20
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 94 3e-19
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 93 5e-19
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 92 6e-19
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 92 6e-19
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 92 1e-18
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 89 7e-18
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 88 1e-17
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 88 1e-17
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 87 3e-17
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 86 9e-17
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 82 7e-16
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 82 8e-16
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 81 2e-15
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 81 2e-15
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 79 1e-14
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 77 3e-14
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 75 1e-13
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 74 2e-13
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 73 6e-13
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 71 2e-12
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 70 2e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 1e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 1e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 1e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active ... 50 4e-06
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 285/463 (61%), Gaps = 10/463 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+++ +++ PSI+ +I A +++ ++++ GYRPD +T TTLI
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL L + A+ D +V RG + N V+YG ++ GLC+ G T +L LL ++E ++
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+VV++NTIIDSLCK + V DA NLF EM K + P+VVTY+SL+ C G+ +A++LL
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M K I P+++TFN L+DA KEG EA+ + M+K+ + PD+FTYNSL++G+C+
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ ++KA + M + P+V +Y+ +I G CK+K V++ LF EM ++ DT+TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++LI GL G +A ++ +M + G P D TY+ LLD LC + ++KA+ + M+
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
I+ D+ Y +++G+CK G++ + ++F L +KG V TYN MI+GLC + L E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
A ALL +M++ G +P++ T+ T+I A GD + +L+REM
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 206/381 (54%)
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
V + L+ + +M + + L +++ + + YN +I+ C+ +S A L +
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M+ P +VT +SLL G+C ++ +A L+D+M PD ITF TL+ L
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
EA ++ M+++G +P+L TY +++G C + + A+ +LN M + +V ++
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
II LCK + VD+ALNLF EME I P+ +TYSSLI LC GR S A +L+ +M K
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+ T+N+L+D K +A L M + I PD+ TYN L++G C RL A+
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
++F+ +V K V TYN +I G CK ++ L EM +G + D +T+ T+I L
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 479 FEKGDNYKAEKLLREMMARGL 499
F GD A+K+ ++M++ G+
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGV 466
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 231/455 (50%), Gaps = 25/455 (5%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV 99
DDAI +F ++ + P PSI+EF ++ SA + + K D V GE
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKF-------DVVISL---------GEK 110
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI 159
+ L+ + G +Y LI CR Q +L LL ++ +P++V +++
Sbjct: 111 MQRLE-----IVHGL----YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
++ C K +SDA L +MV PD +T+ +L++G + + EA L+D M ++
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
P+++T+ +V+ L K G+ A N+L M ++ D+ +N+++D C ++ A+
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+ M +G+ PNV +YS +I LC +A L ++M KI P+ +T+++LID
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
K G+ A +L D+M + D FTYNSL++ C +DKA + + M + PDVV
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
TYN L+ G CK R+++ E+F+++ +G TY +I GL +G D A + +M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
G PD +T+ ++ L G KA ++ M
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 195/375 (52%), Gaps = 6/375 (1%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA 102
+ IFN ++ S+ ++ + A ++ ++ KG RP+ VT ++LI LC G A
Sbjct: 260 VVIFNTII-----DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDS 162
Q D++ + N V++ LI + G+ + +L + + P++ YN++++
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 163 LCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD 222
C + A +F MV K PDVVTYN+L+ GFC ++++ TEL EM+ + + D
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 223 VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILN 282
+T+ TL+ L +G+ A+ V M+ GV PD+ TY+ L+DG C ++ KA+ + +
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
M + + +++ Y+ +I G+CK VD+ +LF + + P+ +TY+++I GLC
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
+ A+ L+ +M G + TYN+L+ + + L ++MR D T
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 614
Query: 403 ILMDGLCKEGRLKNA 417
++ + L +GRL +
Sbjct: 615 LVANML-HDGRLDKS 628
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 183/380 (48%), Gaps = 35/380 (9%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
Y I+ + D + DA LF MV + P +V +N LL + + L ++M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
R I + T+N L++ + + A +L MMK G +P + T +SL++GYC I+
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
A+A+++ M + G P+ +++ +IHGL + EA+ L M P+ +TY ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
+GLCK G A L+++M AD +N+++D LCK HVD A+ L K+M +GI+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 396 PDVVTY-----------------------------------NILMDGLCKEGRLKNAQEV 420
P+VVTY N L+D KEG+ A+++
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+ D++ + + TYN ++NG C D+A + M K C PD +T+ T+I +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 481 KGDNYKAEKLLREMMARGLL 500
+L REM RGL+
Sbjct: 413 SKRVEDGTELFREMSHRGLV 432
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 345 bits (885), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 283/463 (61%), Gaps = 10/463 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+++ +++ PSI+ +I A +++ ++++ GYRPD +T TTLI
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL L + A+ D +V RG + N V+YG ++ GLC+ G + LL ++E ++
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+VV++NTIIDSLCK + V DA NLF EM K + P+VVTY+SL+ C G+ +A++LL
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M K I P+++TFN L+DA KEG EA+ + M+K+ + PD+FTYNSL++G+C+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ ++KA + M + P++ +Y+ +I G CK+K V++ LF EM ++ DT+TY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++LI GL G +A ++ +M + G P D TY+ LLD LC + ++KA+ + M+
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
I+ D+ Y +++G+CK G++ + ++F L +KG V TYN MI+GLC + L E
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
A ALL +M++ G +PD+ T+ T+I A GD + +L+REM
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 206/379 (54%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+ L+ + +M + + L +++ + N+ YN +I+ C+ +S A L +M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
P +VT +SLL G+C ++ +A L+D+M PD ITF TL+ L
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
EA ++ M+++G +P+L TY +++G C +I+ A +LN M + +V ++ II
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
LCK + VD+ALNLF EME I P+ +TYSSLI LC GR S A +L+ +M K
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ T+N+L+D K +A L M + I PD+ TYN L++G C RL A+++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
F+ +V K + TYN +I G CK ++ L EM +G + D +T+ T+I LF
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 481 KGDNYKAEKLLREMMARGL 499
GD A+K+ ++M++ G+
Sbjct: 373 DGDCDNAQKVFKQMVSDGV 391
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 224/446 (50%), Gaps = 25/446 (5%)
Query: 49 LLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDD 108
++ + P PSI EF ++ SA + + K L+ L GE + L
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKF-------------DLVISL---GEKMQRL----- 39
Query: 109 VVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
G N +Y LI CR Q +L LL ++ +P++V +++++ C K
Sbjct: 40 ----GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
+SDA L +MV PD +T+ +L++G + + EA L+D M ++ P+++T+
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
+V+ L K G++ A N+L M ++ D+ +N+++D C ++ A+ + M +G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+ PNV +YS +I LC +A L ++M KI P+ +T+++LID K G+ A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
+L D+M + D FTYNSL++ C +DKA + + M + PD+ TYN L+ G
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
CK R+++ E+F+++ +G TY +I GL +G D A + +M G PD
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 469 ITFETIICALFEKGDNYKAEKLLREM 494
+T+ ++ L G KA ++ M
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 207/428 (48%), Gaps = 47/428 (10%)
Query: 36 IHN-ADDAISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAV 84
+HN A +A+++ +R++ P+++ +G I AF++L K+ D V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T+I LC V AL ++ +G R N V+Y +LI LC G+ + QLL +
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
+ PN+V +N +ID+ K+ +A L +M+ + + PD+ TYNSL+ GFC+ +L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 205 KEA-----------------------------------TELLDEMTRKNIGPDVITFNTL 229
+A TEL EM+ + + D +T+ TL
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+ L +G+ A+ V M+ GV PD+ TY+ L+DG C ++ KA+ + + M + +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
+++ Y+ +I G+CK VD+ +LF + + P+ +TY+++I GLC + A+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 350 LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
L+ +M G D TYN+L+ + + L ++MR D T ++ + L
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML- 545
Query: 410 KEGRLKNA 417
+GRL +
Sbjct: 546 HDGRLDKS 553
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 134/249 (53%)
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
M+K P +F +N L+ + + + I++ M + G++ N+++Y+I+I+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
+ AL L +M + P +T SSL++G C RIS A LVD+M G D T+ +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
L+ L + +A+AL +M +G QP++VTY ++++GLCK G + A + +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE 488
V +N +I+ LCK D+AL L EME KG P+ +T+ ++I L G A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 489 KLLREMMAR 497
+LL +M+ +
Sbjct: 241 QLLSDMIEK 249
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 345 bits (885), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/540 (34%), Positives = 296/540 (54%), Gaps = 80/540 (14%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPS--------------------------------- 66
DDA+ +F + + P P +I+F ++ S
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 67 ------------AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF--------H 106
AFS +GKI+K GY PD VT +TLI GLCL+G V AL+ H
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 107 ---------------------------DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQ 139
D +V GF+ N+V+YG ++K +C+ GQT +++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
LLR++E +K + V Y+ IID LCKD + +AFNLF+EM +K D++ Y +L+ GFC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
G+ + +LL +M ++ I PDV+ F+ L+D KEG ++EA+ + M+++G+ PD
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
TY SL+DG+C N+++KA +L+ M +G PN+ +++I+I+G CK ++D+ L LF +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
++ DT+TY++LI G C+ G++ A EL EM ++ D +Y LLD LC +
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
+KA+ + +K+ ++ D+ YNI++ G+C ++ +A ++F L +KG V+TYNIM
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
I GLCK+G EA L +ME+ G P+ T+ +I A +GD K+ KL+ E+ G
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 225/427 (52%), Gaps = 10/427 (2%)
Query: 41 DAISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLI 90
DA+ + +R++ T P+ + +G Q A +L K+ ++ + DAV + +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
GLC G + A +++ +GF+ + + Y TLI+G C G+ +LLR + +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P+VV ++ +ID K+ + +A L EM+ + +SPD VTY SL+ GFC QL +A +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
LD M K GP++ TFN L++ K + + + M +GV D TYN+L+ G+C
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+ ++ A + M R V P++ SY I++ GLC N ++AL +F ++E K+ D
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y+ +I G+C + ++ AW+L + KG D TYN ++ LCK + +A L +KM
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+ G P+ TYNIL+ EG + ++ +++ G+ V T ++++ L L
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKK 614
Query: 451 EALALLS 457
L +LS
Sbjct: 615 SFLDMLS 621
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 168/311 (54%)
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
V+Y L + + +A +L EMTR P +I F+ L + + ++
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
M +G+ +L+T + +++ C +++ A + + + + G P+ ++S +I+GLC
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
V EAL L M + P IT ++L++GLC +G++S A L+D M G ++ TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
+L V+CKS A+ L +KM ++ I+ D V Y+I++DGLCK+G L NA +F ++ IKG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE 488
+ + Y +I G C G +D+ LL +M + PD + F +I ++G +AE
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 489 KLLREMMARGL 499
+L +EM+ RG+
Sbjct: 338 ELHKEMIQRGI 348
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/468 (38%), Positives = 279/468 (59%), Gaps = 10/468 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A S+ R P I F G++ A +++ ++++ RPD VT++TLI
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GLCLKG V AL D +V GF+ ++V+YG ++ LC+ G + +L L R++E +K
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+VV Y+ +IDSLCKD DA +LF+EM +K + DVVTY+SL+ G C G+ + ++L
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
EM +NI PDV+TF+ L+D KEG + EAK + M+ +G+ PD TYNSL+DG+C
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
N +++A + + M +G P++ +YSI+I+ CK K VD+ + LF E+ +IP+TITY
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++L+ G C+SG+++ A EL EM ++G P TY LLD LC + ++KA+ + +KM+
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+ + YNI++ G+C ++ +A +F L KG V TYN+MI GLCK+G E
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
A L +M++ GC PD T+ +I A + +L+ EM G
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 261/508 (51%), Gaps = 53/508 (10%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFS-------VLG---KILKKGYRPDAVTLTTL 89
+DAI +F ++ + P P+ I+F ++ SA + VLG + G D T+T +
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRL----NQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
I C K + L F V+ R ++L + +++ TL+ G C G+ ++ L+ ++
Sbjct: 112 INCYCRK----KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
+P++V +T+I+ LC VS+A L MV PD VTY +L C G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
A +L +M +NI V+ ++ ++D+L K+G+ +A ++ M +G+K D+ TY+SL+
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
G C + + +L M R + P+V ++S +I K + EA L+ EM I
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
PDTITY+SLIDG CK + A ++ D M +KG D TY+ L++ CK+ VD + L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
+++ +G+ P+ +TYN L+ G C+ G+L A+E+FQ++V +G +V TY I+++GLC
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 446 EGLFDEALALLSEME-----------------------------------DKGCIPDAIT 470
G ++AL + +M+ DKG PD +T
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 471 FETIICALFEKGDNYKAEKLLREMMARG 498
+ +I L +KG +A+ L R+M G
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 209/381 (54%)
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ + L + R Q L + +E + ++ ++ +I+ C+ K + AF++
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
PD +T+++L+ GFC+ G++ EA L+D M PD++T +TL++ L +G
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
V EA ++ M++ G +PD TY +++ C A+ + M +R + +V YSI
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I LCK+ D+AL+LF EME I D +TYSSLI GLC G+ +++ EM +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
D T+++L+DV K + +A L +M +GI PD +TYN L+DG CKE L A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
++F +V KG + TY+I+IN CK D+ + L E+ KG IP+ IT+ T++
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 479 FEKGDNYKAEKLLREMMARGL 499
+ G A++L +EM++RG+
Sbjct: 431 CQSGKLNAAKELFQEMVSRGV 451
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 228/427 (53%), Gaps = 10/427 (2%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPS----------AFSVLGKILKKGYRPDAVTLTTLI 90
+A+ + +R++ P + +G + + A + K+ ++ + V + +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
LC G AL +++ +G + + V+Y +LI GLC G+ ++LR++ G +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P+VV ++ +ID K+ + +A L++EM+ + ++PD +TYNSL+ GFC L EA ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
D M K PD++T++ L+++ K V + + + +G+ P+ TYN+L+ G+C
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
++N A + M RGV P+V +Y I++ GLC N +++AL +F +M+ ++
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y+ +I G+C + ++ AW L + +KG D TYN ++ LCK + +A L +KM+
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+ G PD TYNIL+ L ++ E+ +++ + G+ T ++I+ L L
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDK 612
Query: 451 EALALLS 457
L +LS
Sbjct: 613 SFLDMLS 619
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 141/262 (53%)
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
V +A ++ M++ P +N L + + + M G+ ++++ +I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I+ C+ K + A ++ + PDTIT+S+L++G C GR+S A LVD M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
Q D T ++L++ LC V +A+ L +M + G QPD VTY +++ LCK G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
++F+ + + +V Y+I+I+ LCK+G FD+AL+L +EME KG D +T+ ++I L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 479 FEKGDNYKAEKLLREMMARGLL 500
G K+LREM+ R ++
Sbjct: 291 CNDGKWDDGAKMLREMIGRNII 312
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 302/541 (55%), Gaps = 80/541 (14%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF-------------------------------------- 61
DDA+ +F ++ + P PSI+EF
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 62 -------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLC-------------------- 94
Q+P A +VLGK++K GY PD VTL++L+ G C
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 95 ---------------LKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQ 139
L + A+ D +VARG + + +YGT++ GLC+ G +L
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
LL+++E ++ +VV+Y TIID+LC K V+DA NLF+EM K + P+VVTYNSL+ C
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
G+ +A+ LL +M + I P+V+TF+ L+DA KEG + EA+ + M+K+ + PD+F
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
TY+SL++G+C+ + +++A + M + PNV +Y+ +I G CK K V+E + LF EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
++ +T+TY++LI GL ++G A ++ +M + G P D TY+ LLD LCK +
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
+KA+ + + ++ ++PD+ TYNI+++G+CK G++++ ++F L +KG V Y M
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
I+G C++GL +EA AL EM++ G +P++ T+ T+I A GD + +L++EM + G
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Query: 500 L 500
+
Sbjct: 602 V 602
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 181/370 (48%), Gaps = 35/370 (9%)
Query: 166 DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVIT 225
D + DA +LF EMV + P +V +N LL + + L + M I D+ +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
+N L++ + + A VL MMK G +PD+ T +SL++GYC I++A+A+++ M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
PN +++ +IHGL + EA+ L M PD TY ++++GLCK G I
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
A L+ +M AD Y +++D LC +V+ A+ L +M ++GI+P+VVTYN L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 406 DGLC-----------------------------------KEGRLKNAQEVFQDLVIKGYH 430
LC KEG+L A++++ +++ +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+ TY+ +ING C DEA + M K C P+ +T+ T+I + + +L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 491 LREMMARGLL 500
REM RGL+
Sbjct: 418 FREMSQRGLV 427
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 286/468 (61%), Gaps = 10/468 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A S +++ P+ I F G++ A ++ ++++ G++PD +T+ TL+
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GLCL G+ A+ D +V G + N V+YG ++ +C+ GQT +++LLR++E +K
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+ V Y+ IID LCK + +AFNLF+EM +K ++ +++TYN L+ GFC G+ + +LL
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M ++ I P+V+TF+ L+D+ KEG ++EA+ + M+ +G+ PD TY SL+DG+C
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
N ++KA +++ M +G PN+ +++I+I+G CK +D+ L LF +M ++ DT+TY
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++LI G C+ G+++ A EL EM ++ P + TY LLD LC + +KA+ + +K+
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
++ D+ YNI++ G+C ++ +A ++F L +KG V+TYNIMI GLCK+G E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
A L +ME+ G PD T+ +I A GD K+ KL+ E+ G
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 261/507 (51%), Gaps = 49/507 (9%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEFGQIPSAFS---------VLGKILK-KGYRPDAVTLTT 88
ADDAI +F ++ + P P++I+F ++ SA + L K ++ KG + TL+
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL-RQVE-G 146
+I C ++ A ++ G+ N +++ TLI GLC G+ +L+L+ R VE G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
H KP+++ NT+++ LC ++A L +MV P+ VTY +L C GQ
Sbjct: 189 H--KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A ELL +M +NI D + ++ ++D L K G++ A N+ M +G+ ++ TYN L+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G+C + +L M +R + PNV ++S++I K + EA L EM I P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
DTITY+SLIDG CK + A ++VD M +KG + T+N L++ CK++ +D + L
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+KM +G+ D VTYN L+ G C+ G+L A+E+FQ++V + + TY I+++GLC
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 447 GLFDEALALLSEMED-----------------------------------KGCIPDAITF 471
G ++AL + ++E KG P T+
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 472 ETIICALFEKGDNYKAEKLLREMMARG 498
+I L +KG +AE L R+M G
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 209/396 (52%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
GQ A +L K+ ++ + DAV + +I GLC G + A +++ +G N ++Y
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI G C G+ +LLR + + PNVV ++ +IDS K+ + +A L EM+
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ ++PD +TY SL+ GFC L +A +++D M K P++ TFN L++ K + +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+ M +GV D TYN+L+ G+C + ++N A + M R V PN+ +Y I++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
GLC N ++AL +F ++E K+ D Y+ +I G+C + ++ AW+L + KG
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
TYN ++ LCK + +A L +KM + G PD TYNIL+ +G + ++
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLS 457
++L G+ V T ++I+ L L L +LS
Sbjct: 602 EELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 169/297 (56%), Gaps = 6/297 (2%)
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV---MMKQGVKPDLFTYN 262
+A +L +M P VI F+ L A+ K K+ VLA+ M +G+ +L+T +
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAK---TKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
+++ +C ++ A + + + + G PN ++S +I+GLC V EAL L M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
PD IT ++L++GLC SG+ + A L+D+M G + TY +L+V+CKS A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
+ L +KM ++ I+ D V Y+I++DGLCK G L NA +F ++ +KG + TYNI+I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 443 LCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
C G +D+ LL +M + P+ +TF +I + ++G +AE+L +EM+ RG+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 162/354 (45%), Gaps = 46/354 (12%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGK----------ILKKGYRPDAVTLTTL 89
D+A ++FN + T +II + + F G+ ++K+ P+ VT + L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I +G++R A + H +++ RG + ++Y +LI G C+ + Q++ +
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
PN+ +N +I+ CK + D LF +M ++ V D VTYN+L+ GFC +G+L A E
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGN------------------------------- 238
L EM + + P+++T+ L+D L G
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 239 ----VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
V +A ++ + +GVKP + TYN ++ G C +++A + M + G P+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+Y+I+I + +++ L E++ D T +ID L GR+ ++
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKSF 632
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 148/323 (45%), Gaps = 45/323 (13%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI----------LKKGYRPDAVTLTTL 89
DD + ++ P+++ F + +F GK+ + +G PD +T T+L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 90 IKGLCLKGEVRRALQFHDDVVARG---------------------------FR------- 115
I G C + + +A Q D +V++G FR
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 116 -LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+ V+Y TLI+G C +G+ + +L +++ V PN+V Y ++D LC + A
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
+F ++ K+ D+ YN +++G C ++ +A +L + K + P V T+N ++ L
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
K+G + EA+ + M + G PD +TYN L+ + + K++ ++ + + G + +
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Query: 295 SYSIIIHGLCKNKMVDEALNLFA 317
+ ++I L ++ L++ +
Sbjct: 615 TIKMVIDMLSDGRLKKSFLDMLS 637
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 104/190 (54%)
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
D+A++LF +M + +P I +S L + K+ + L +M KG + +T + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
++ C+ + A + K+ G +P+ +T++ L++GLC EGR+ A E+ +V G+
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEK 489
+ T N ++NGLC G EA+ L+ +M + GC P+A+T+ ++ + + G A +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 490 LLREMMARGL 499
LLR+M R +
Sbjct: 250 LLRKMEERNI 259
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 285/505 (56%), Gaps = 45/505 (8%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSA-------------------------------- 67
DDAI++F ++ + P PS+++F + SA
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 68 -------------FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF 114
+SVLGK++K GY PD T TLIKGL L+G+V A+ D +V G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+ + V+Y +++ G+CR G T +L LLR++E VK +V Y+TIIDSLC+D + A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
LF EM K + VVTYNSL+ G C G+ + LL +M + I P+VITFN L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
KEG ++EA + M+ +G+ P++ TYN+LMDGYC+ N +++A +L+ M + +P++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+++ +I G C K VD+ + +F + ++ + +TYS L+ G C+SG+I A EL EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+ G D TY LLD LC + ++KA+ + + ++ + +V Y +++G+CK G++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
++A +F L KG V TY +MI+GLCK+G EA LL +ME+ G P+ T+ T+
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 475 ICALFEKGDNYKAEKLLREMMARGL 499
I A GD + KL+ EM + G
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 222/413 (53%), Gaps = 10/413 (2%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPS----------AFSVLGKILKKGYRPDAVTLTTLI 90
+A+ + +R++ P ++ + I + A +L K+ ++ + D T +T+I
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
LC G + A+ ++ +G + + V+Y +L++GLC+ G+ LL+ + +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
PNV+ +N ++D K+ + +A L+ EM+ + +SP+++TYN+L+ G+C+ +L EA +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
LD M R PD++TF +L+ V + V + K+G+ + TY+ L+ G+C
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+I A + M GV P+V +Y I++ GLC N +++AL +F +++ K+ +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y+++I+G+CK G++ AW L + KG + TY ++ LCK + +A L +KM
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
+ G P+ TYN L+ ++G L + ++ +++ G+ + ++I+ L
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 192/350 (54%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P++V ++ ++ + K + + ++ + ++ ++ T N ++ FC + A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
L ++ + PD TFNTL+ L EG V EA ++ M++ G +PD+ TYNS+++G C
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+ + A+ +L M +R V +V +YS II LC++ +D A++LF EME I +T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y+SL+ GLCK+G+ + L+ +M ++ + T+N LLDV K + +A L K+M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+GI P+++TYN LMDG C + RL A + +V + T+ +I G C D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+ + + + +G + +A+T+ ++ + G AE+L +EM++ G+L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 177/333 (53%), Gaps = 6/333 (1%)
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
DA LF EM+ + P +V ++ Q + ++ I ++ T N ++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
+ + A +VL +MK G +PD T+N+L+ G L ++++A+ +++ M + G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
P+V +Y+ I++G+C++ AL+L +ME + D TYS++ID LC+ G I A L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
EM KG + TYNSL+ LCK+ + L K M + I P+V+T+N+L+D K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
EG+L+ A E++++++ +G + TYN +++G C + EA +L M C PD +T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 471 FETII---CALFEKGDNYKAEKLLREMMARGLL 500
F ++I C + D K+ R + RGL+
Sbjct: 371 FTSLIKGYCMVKRVDDGM---KVFRNISKRGLV 400
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 338 bits (868), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 287/463 (61%), Gaps = 10/463 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+++ +++ P I+ +I A S++G++++ GY+PD+ T TLI
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL A+ D +V +G + + V+YG ++ GLC+ G +L LL+++E ++P
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
VV+YNTIID+LC K V+DA NLF+EM K + P+VVTYNSL+ C G+ +A+ LL
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M + I P+V+TF+ L+DA KEG + EA+ + M+K+ + PD+FTY+SL++G+C+
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ +++A + M + PNV +Y+ +I G CK K VDE + LF EM ++ +T+TY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++LI G ++ +A + +M + G D TY+ LLD LC + V+ A+ + + ++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
++PD+ TYNI+++G+CK G++++ ++F L +KG V TY M++G C++GL +E
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
A AL EM+++G +PD+ T+ T+I A GD + +L+REM
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 261/506 (51%), Gaps = 45/506 (8%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSA-------------------------------- 67
DDA+++F ++ + P PSI+EF ++ SA
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 68 -------------FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF 114
+VL K++K GY PD VTL +L+ G C + A+ +V G+
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+ + ++ TLI GL R + ++ L+ ++ +P++V Y +++ LCK + A +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
L +M K+ P VV YN+++ C + +A L EM K I P+V+T+N+L+ L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
G +A +L+ M+++ + P++ T+++L+D + ++ +A + + M +R + P++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+YS +I+G C + +DEA ++F M P+ +TY++LI G CK+ R+ EL EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+G + TY +L+ ++ D A + K+M G+ PD++TY+IL+DGLC G++
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ A VF+ L + TYNIMI G+CK G ++ L + KG P+ +T+ T+
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 475 ICALFEKGDNYKAEKLLREMMARGLL 500
+ KG +A+ L REM G L
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPL 568
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 217/399 (54%), Gaps = 11/399 (2%)
Query: 37 HN-ADDAISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVT 85
HN A +A+++ +R++ P ++ +G I A S+L K+ + P V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
T+I LC V AL ++ +G R N V+Y +LI+ LC G+ + +LL +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
+ PNVV ++ +ID+ K+ + +A L+ EM+ + + PD+ TY+SL+ GFC+ +L
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
EA + + M K+ P+V+T+NTL+ K V E + M ++G+ + TY +L+
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
G+ E + A + M GV P++ +YSI++ GLC N V+ AL +F ++ K+
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
PD TY+ +I+G+CK+G++ W+L + KG + TY +++ C+ ++A AL
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
++M+++G PD TYN L+ ++G + E+ +++
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 187/380 (49%), Gaps = 35/380 (9%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
Y I + D + DA NLF +MV + P +V ++ LL + + L ++M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
I ++ T++ L++ + + A VLA MMK G +PD+ T NSL++G+C N I+
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
A++++ M + G P+ +++ +IHGL ++ EA+ L M PD +TY ++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
+GLCK G I A L+ +M YN+++D LC +V+ A+ L +M ++GI+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 396 PDVVTYNILMDGLC-----------------------------------KEGRLKNAQEV 420
P+VVTYN L+ LC KEG+L A+++
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+ +++ + + TY+ +ING C DEA + M K C P+ +T+ T+I +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 481 KGDNYKAEKLLREMMARGLL 500
+ +L REM RGL+
Sbjct: 409 AKRVDEGMELFREMSQRGLV 428
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 336 bits (861), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 290/468 (61%), Gaps = 10/468 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+++ +++ P I+ +I A +++ ++++ GY+PD T TTLI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL L + A+ D +V RG + + V+YGT++ GLC+ G +L LL+++E ++
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+VV+YNTIID LCK K + DA NLF+EM K + PDV TY+SL+ C G+ +A+ LL
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M + I P+V+TF+ L+DA KEG + EA+ + M+K+ + PD+FTY+SL++G+C+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ +++A + M + PNV +YS +I G CK K V+E + LF EM ++ +T+TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++LI G ++ +A + +M + G + TYN LLD LCK+ + KA+ + + ++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
++PD+ TYNI+++G+CK G++++ E+F +L +KG V YN MI+G C++G +E
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
A +LL +M++ G +P++ T+ T+I A GD + +L++EM + G
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 262/510 (51%), Gaps = 45/510 (8%)
Query: 36 IHNADDAISIFNRLLGTSPTPSIIEF---------------------------------- 61
I DDA+ +F ++ + P PSI+EF
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 62 -----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVV 110
Q+ A +VL K++K GY PD VTL++L+ G C + A+ D +V
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 111 ARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVS 170
G++ + ++ TLI GL + ++ L+ Q+ +P++V Y T+++ LCK +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
A +L +M K+ DVV YN+++ G C + +A L EM K I PDV T+++L+
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
L G +A +L+ M+++ + P++ T+++L+D + ++ +A + + M +R +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
P++ +YS +I+G C + +DEA ++F M P+ +TYS+LI G CK+ R+ EL
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
EM +G + TY +L+ ++ D A + K+M G+ P+++TYNIL+DGLCK
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
G+L A VF+ L + TYNIMI G+CK G ++ L + KG P+ I
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 471 FETIICALFEKGDNYKAEKLLREMMARGLL 500
+ T+I KG +A+ LL++M G L
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 335 bits (859), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 296/541 (54%), Gaps = 80/541 (14%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEFGQIPSA------------------------------- 67
ADDA+ +F ++ + P P++I+F ++ SA
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 68 --------------FSVLGKILKKGYRPDAV----------------------------- 84
FS +GKI+K GY PD V
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 85 ------TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASL 138
TL TL+ GLCL G+V A+ D +V GF+ N+V+YG ++ +C+ GQT ++
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+LLR++E +K + V Y+ IID LCKD + +AFNLF+EM +K D++TYN+L+ GF
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
C G+ + +LL +M ++ I P+V+TF+ L+D+ KEG ++EA +L MM++G+ P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
TYNSL+DG+C N + +AI +++ M +G P++ +++I+I+G CK +D+ L LF E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHH 378
M +I +T+TY++L+ G C+SG++ A +L EM ++ D +Y LLD LC +
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
++KA+ + K+ ++ D+ Y I++ G+C ++ +A ++F L +KG + R YNI
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
MI+ LC++ +A L +M ++G PD +T+ +I A D A +L+ EM + G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 499 L 499
Sbjct: 609 F 609
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 228/427 (53%), Gaps = 10/427 (2%)
Query: 41 DAISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLI 90
DA+ + +R++ T P+ + +G Q A +L K+ ++ + DAV + +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
GLC G + A +++ +GF+ + ++Y TLI G C G+ +LLR + +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
PNVV ++ +IDS K+ + +A L EM+ + ++P+ +TYNSL+ GFC +L+EA ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+D M K PD++TFN L++ K + + + M +GV + TYN+L+ G+C
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
++ A + M R V P++ SY I++ GLC N +++AL +F ++E K+ D
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y +I G+C + ++ AW+L + KG D YN ++ LC+ + KA L +KM
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
++G PD +TYNIL+ + A E+ +++ G+ V T ++IN L L
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDK 630
Query: 451 EALALLS 457
L +LS
Sbjct: 631 SFLDMLS 637
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 192/350 (54%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P V+ +N + ++ K K L +M K ++ + T + ++ FC +L A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+ ++ + PD + FNTL++ L E V EA ++ M++ G KP L T N+L++G CL
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+++ A+ +++ M + G PN +Y +++ +CK+ A+ L +ME I D +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
YS +IDGLCK G + +A+ L +EM KG AD TYN+L+ C + D L + M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+ I P+VVT+++L+D KEG+L+ A ++ ++++ +G TYN +I+G CKE +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
EA+ ++ M KGC PD +TF +I + +L REM RG++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 335 bits (858), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 286/468 (61%), Gaps = 10/468 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+++ +++ P+I+ +I A +++ ++ GY+P+ VT TLI
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL L + A+ D +VA+G + + V+YG ++ GLC+ G T + LL ++E ++P
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
V++YNTIID LCK K + DA NLF EM K + P+VVTY+SL+ C G+ +A+ LL
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M + I PDV TF+ L+DA KEG + EA+ + M+K+ + P + TY+SL++G+C+
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ +++A + M + P+V +Y+ +I G CK K V+E + +F EM ++ +T+TY
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+ LI GL ++G A E+ EM + G P + TYN+LLD LCK+ ++KA+ + + ++
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
++P + TYNI+++G+CK G++++ ++F +L +KG V YN MI+G C++G +E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
A AL EM++ G +P++ + T+I A GD + +L++EM + G
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 158/506 (31%), Positives = 265/506 (52%), Gaps = 45/506 (8%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFG------------------------------------- 62
DDA+++F ++ + P PSIIEF
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 63 --------QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF 114
Q+P A +VLGK++K GY P+ VTL++L+ G C + A+ D + G+
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+ N V++ TLI GL + ++ L+ ++ +P++V Y +++ LCK AFN
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
L ++M K+ P V+ YN+++ G C + +A L EM K I P+V+T+++L+ L
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
G +A +L+ M+++ + PD+FT+++L+D + ++ +A + + M +R + P++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+YS +I+G C + +DEA +F M PD +TY++LI G CK R+ E+ EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+G + TYN L+ L ++ D A + K+M G+ P+++TYN L+DGLCK G+L
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ A VF+ L T+ TYNIMI G+CK G ++ L + KG PD + + T+
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 475 ICALFEKGDNYKAEKLLREMMARGLL 500
I KG +A+ L +EM G L
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTL 568
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 231/429 (53%), Gaps = 12/429 (2%)
Query: 36 IHN-ADDAISIFNRLLGTSPTPSIIEFGQIPS----------AFSVLGKILKKGYRPDAV 84
+HN A +A+++ +R++ P ++ +G + + AF++L K+ + P +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T+I GLC + AL ++ +G R N V+Y +LI LC G+ + +LL +
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
+ P+V ++ +ID+ K+ + +A L+ EMV + + P +VTY+SL+ GFC+ +L
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
EA ++ + M K+ PDV+T+NTL+ K V+E V M ++G+ + TYN L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+ G + + A I M GV PN+ +Y+ ++ GLCKN +++A+ +F ++ K+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
P TY+ +I+G+CK+G++ W+L + KG D YN+++ C+ ++A A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
L K+M++ G P+ YN L+ ++G + + E+ +++ G+ T ++ N L
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML- 616
Query: 445 KEGLFDEAL 453
+G D++
Sbjct: 617 HDGRLDKSF 625
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 139/262 (53%)
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
E + +A + M+K P + ++ L+ +N+ + I++ M G+ N ++
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
YSI+I+ C+ + AL + +M + P+ +T SSL++G C S RIS A LVD+M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
G + T+N+L+ L + +A+AL +M +G QPD+VTY ++++GLCK G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A + + V YN +I+GLCK D+AL L EME KG P+ +T+ ++I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 476 CALFEKGDNYKAEKLLREMMAR 497
L G A +LL +M+ R
Sbjct: 299 SCLCNYGRWSDASRLLSDMIER 320
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 288/463 (62%), Gaps = 10/463 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A++I +++ PSI+ +I A +++ ++++ GY+PD VT TTL+
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL + A+ + +V +G + + V+YG +I GLC+ G+ +L LL ++E ++
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+VV+Y+T+IDSLCK + V DA NLF+EM K + PDV TY+SL+ C G+ +A+ LL
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M + I P+V+TFN+L+DA KEG + EA+ + M+++ + P++ TYNSL++G+C+
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ +++A I M + P+V +Y+ +I+G CK K V + + LF +M ++ +T+TY
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++LI G ++ +A + +M + G + TYN+LLD LCK+ ++KA+ + + ++
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
++PD+ TYNI+ +G+CK G++++ ++F L +KG V YN MI+G CK+GL +E
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
A L +M++ G +PD+ T+ T+I A GD + +L++EM
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 208/381 (54%)
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
V + L+ + +M + + ++E V N+ YN +I+ LC+ +S A + +
Sbjct: 66 VEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGK 125
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M+ P +VT NSLL GFC ++ EA L+D+M PD +TF TLV L +
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
EA ++ M+ +G +PDL TY ++++G C E + A+ +LN M + + +V YS
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I LCK + VD+ALNLF EM+ I PD TYSSLI LC GR S A L+ +M +
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+ T+NSL+D K + +A L +M + I P++VTYN L++G C RL AQ
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
++F +V K V TYN +ING CK + + L +M +G + + +T+ T+I
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 479 FEKGDNYKAEKLLREMMARGL 499
F+ D A+ + ++M++ G+
Sbjct: 426 FQASDCDNAQMVFKQMVSDGV 446
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 228/428 (53%), Gaps = 12/428 (2%)
Query: 37 HN-ADDAISIFNRLLGTSPTPSIIEFGQIPS----------AFSVLGKILKKGYRPDAVT 85
HN A +A+++ R++ P ++ +G + + A ++L K+ K D V
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
+T+I LC V AL ++ +G R + +Y +LI LC G+ + +LL +
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
+ PNVV +N++ID+ K+ + +A LF EM+ + + P++VTYNSL+ GFC+ +L
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
EA ++ M K+ PDV+T+NTL++ K V + + M ++G+ + TY +L+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
G+ ++ + A + M GV PN+ +Y+ ++ GLCKN +++A+ +F ++ K+
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
PD TY+ + +G+CK+G++ W+L + KG D YN+++ CK ++A L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
KM++ G PD TYN L+ ++G + E+ +++ + TY ++ + L
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-H 601
Query: 446 EGLFDEAL 453
+G D+
Sbjct: 602 DGRLDKGF 609
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 206/393 (52%), Gaps = 4/393 (1%)
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK----PNVVMYNTIIDSLCKDK 167
RG + +SY + L R L + G +VK P++V ++ ++ ++ K K
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFN 227
+ +M + VS ++ TYN ++ C QL A +L +M + GP ++T N
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
+L++ + EA ++ M++ G +PD T+ +L+ G N+ ++A+A++ M +
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
G P++ +Y +I+GLCK D ALNL +ME KI D + YS++ID LCK + A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
L EM NKG D FTY+SL+ LC A L M ++ I P+VVT+N L+D
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
KEG+L A+++F +++ + + TYN +ING C DEA + + M K C+PD
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 468 AITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+T+ T+I + +L R+M RGL+
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 224/448 (50%), Gaps = 25/448 (5%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV 99
D+A+ +F ++ + P PSI+EF ++ SA + + K D V
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKF-------DLV--------------- 84
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI 159
+ F + + G N +Y +I LCR Q +L +L ++ P++V N++
Sbjct: 85 ---ISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSL 141
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
++ C +S+A L +MV PD VT+ +L++G + EA L++ M K
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
PD++T+ +++ L K G A N+L M K ++ D+ Y++++D C ++ A+
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+ M +G+ P+V +YS +I LC +A L ++M KI P+ +T++SLID
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
K G++ A +L DEM + + TYNSL++ C +D+A + M + PDVV
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
TYN L++G CK ++ + E+F+D+ +G TY +I+G + D A + +M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKA 487
G P+ +T+ T++ L + G KA
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 273/439 (62%), Gaps = 10/439 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+++ +++ PSI+ +I A +++ ++++ GYRPD +T TTLI
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL L + A+ D +V RG + N V+YG ++ GLC+ G + LL ++E ++
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
NVV+Y+T+IDSLCK + DA NLF+EM K V P+V+TY+SL+ C + +A+ LL
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M + I P+V+TFN L+DA KEG + EA+ + M+K+ + PD+FTY+SL++G+C+
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ +++A + M + PNV +Y+ +I+G CK K +DE + LF EM ++ +T+TY
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++LI G ++ +A + +M + G + TYN+LLD LCK+ ++KA+ + + ++
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
++P + TYNI+++G+CK G++++ ++F L +KG V YN MI+G C++GL +E
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Query: 452 ALALLSEMEDKGCIPDAIT 470
A AL +M + G +PD+ T
Sbjct: 559 ADALFRKMREDGPLPDSGT 577
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 261/506 (51%), Gaps = 45/506 (8%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF-------------------------------------- 61
DDAI +F ++ + P PSI EF
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 62 -------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF 114
QI A ++LGK++K GY P VTL++L+ G C + A+ D +V G+
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
R + +++ TLI GL + ++ L+ ++ +PN+V Y +++ LCK + AFN
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
L ++M K+ +VV Y++++ C +A L EM K + P+VIT+++L+ L
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
+A +L+ M+++ + P++ T+N+L+D + ++ +A + + M +R + P++
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+YS +I+G C + +DEA ++F M P+ +TY++LI+G CK+ RI EL EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+G + TY +L+ ++ D A + K+M G+ P+++TYN L+DGLCK G+L
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ A VF+ L T+ TYNIMI G+CK G ++ L + KG PD I + T+
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 475 ICALFEKGDNYKAEKLLREMMARGLL 500
I KG +A+ L R+M G L
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPL 572
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 181/367 (49%), Gaps = 35/367 (9%)
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
+ DA LF MV + P + +N LL + + L ++M R I ++ T+N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
L++ + + A +L MMK G +P + T +SL++GYC I+ A+A+++ M + G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
P+ +++ +IHGL + EA+ L M P+ +TY +++GLCK G I A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY------- 401
L+++M A+ Y++++D LCK H D A+ L +M ++G++P+V+TY
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 402 ----------------------------NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
N L+D KEG+L A++++ +++ + +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLRE 493
TY+ +ING C DEA + M K C P+ +T+ T+I + + +L RE
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 494 MMARGLL 500
M RGL+
Sbjct: 426 MSQRGLV 432
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%)
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
R + Y I+ + +D+A+ LF M + +P ++ L+ + K +
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
L ++M G + +TYN L++ C+ + A+AL KM G +P +VT + L++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
G C R+ +A + +V GY T+ +I+GL EA+AL+ M +GC P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 467 DAITFETIICALFEKGDNYKAEKLLREMMA 496
+ +T+ ++ L ++GD A LL +M A
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 276/469 (58%), Gaps = 13/469 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+++ +++ P I+ +I A +++ ++++ GY+PD T TTLI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL L + A+ D +V RG + + V+YGT++ GLC+ G +L LL ++E +K
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
NVV++NTIIDSLCK + V A +LF+EM K + P+VVTYNSL+ C G+ +A+ LL
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
M K I P+V+TFN L+DA KEG + EA+ + M+++ + PD TYN L++G+C+
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
N +++A + M + PN+ +Y+ +I+G CK K V++ + LF EM ++ +T+TY
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+++I G ++G A + +M + P D TY+ LL LC +D A+ + K ++
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
++ ++ YN +++G+CK G++ A ++F L IK V TYN MI+GLC + L E
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP---DVVTYNTMISGLCSKRLLQE 553
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
A L +M++ G +P++ T+ T+I A D + +L++EM + G +
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV 602
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 257/510 (50%), Gaps = 48/510 (9%)
Query: 36 IHNADDAISIFNRLLGTSPTPSIIEF---------------------------------- 61
I DDA+ +F ++ + P PSI+EF
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 62 -----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVV 110
Q+ A +VL K++K GY PD VTL++L+ G C + A+ D +V
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 111 ARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVS 170
G++ + ++ TLI GL + ++ L+ Q+ +P++V Y T+++ LCK +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
A NL ++M ++ +VV +N+++ C ++ A +L EM K I P+V+T+N+L+
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
+ L G +A +L+ M+++ + P++ T+N+L+D + ++ +A + M QR +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
P+ +Y+++I+G C + +DEA +F M +P+ TY++LI+G CK R+ EL
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
EM +G + TY +++ ++ D A + K+M + D++TY+IL+ GLC
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
G+L A +F+ L + + YN MI G+CK G EA L + K PD +T
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVT 537
Query: 471 FETIICALFEKGDNYKAEKLLREMMARGLL 500
+ T+I L K +A+ L R+M G L
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 189/349 (54%), Gaps = 14/349 (4%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P V + + S C ++ + A + E++ ++S D++ ++ +A +L
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREILRNRLS-DII-------------KVDDAVDL 70
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+M + P ++ FN L+ A+ K + ++ M G+ DL+TY+ ++ +C
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
++++ A+A+L M + G P++ + S +++G C +K + +A+ L +M + PDT T
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
+++LI GL + S A LVD+M +G D TY ++++ LCK +D A+ L KM
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
I+ +VV +N ++D LCK ++ A ++F ++ KG V TYN +IN LC G +
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+A LLS M +K P+ +TF +I A F++G +AEKL EM+ R +
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 282/511 (55%), Gaps = 36/511 (7%)
Query: 14 LRLNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFG----------Q 63
L + +F ++ K H LS S+ S F +L P ++ F +
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSL-------STFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 64 IPSAFSVLGKILKKGY---------------RPDAVTLTTLIKGLCLKGEVRRALQFHDD 108
I A ++ G +++ G+ P +T TLI GLCL+G V A +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 109 VVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
+V +G ++ V+YGT++ G+C+MG T+++L LL ++E +KP+VV+Y+ IID LCKD
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
SDA LFSEM+ K ++P+V TYN ++ GFC G+ +A LL +M + I PDV+TFN
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
L+ A KEG + EA+ + M+ + + PD TYNS++ G+C N + A + + MA
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA--- 428
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+P+V +++ II C+ K VDE + L E+ ++ +T TY++LI G C+ ++ A
Sbjct: 429 -SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
+L EM + G D T N LL C++ +++A+ L + ++ I D V YNI++ G+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
CK ++ A ++F L I G V+TYN+MI+G C + +A L +M+D G PD
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 469 ITFETIICALFEKGDNYKAEKLLREMMARGL 499
T+ T+I + G+ K+ +L+ EM + G
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 250/488 (51%), Gaps = 34/488 (6%)
Query: 18 NFPVVSKPSFHSHSL-----SPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLG 72
+ P +++ +F L S + DDAI F+ ++ + P + ++ ++ F +
Sbjct: 61 SLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMN 120
Query: 73 K--ILKKGYRP--------DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+ + YR + + LIK C ++ +L + GF+ + V++
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 123 TLIKGLC---RMGQTRA------------SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDK 167
TL+ GLC R+ + A ++ L Q+ + P V+ +NT+I+ LC +
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFN 227
V +A L ++MV K + DVVTY +++ G C +G K A LL +M +I PDV+ ++
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
++D L K+G+ +A+ + + M+++G+ P++FTYN ++DG+C + A +L M +R
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
+ P+V +++ +I K + EA L EM I PDT+TY+S+I G CK R A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+ D M D T+N+++DV C++ VD+ + L +++ +G+ + TYN L+ G
Sbjct: 421 KHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
C+ L AQ++FQ+++ G T NI++ G C+ +EAL L ++ D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 468 AITFETII 475
+ + II
Sbjct: 537 TVAYNIII 544
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 211/413 (51%), Gaps = 19/413 (4%)
Query: 102 ALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIID 161
A+ F D +V V +I RM + ++ L R++E + N+ +N +I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK---------------E 206
C +S + + F ++ PDVVT+N+LL+G C+ ++ E
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A L D+M + P VITFNTL++ L EG V EA ++ M+ +G+ D+ TY ++++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G C + + A+ +L+ M + + P+V YS II LCK+ +A LF+EM I P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
+ TY+ +IDG C GR S A L+ +M + D T+N+L+ K + +A L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+M + I PD VTYN ++ G CK R +A+ +F DL+ V T+N +I+ C+
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMASP---DVVTFNTIIDVYCRA 445
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
DE + LL E+ +G + + T+ T+I E + A+ L +EM++ G+
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 181/344 (52%), Gaps = 19/344 (5%)
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A +L+ +M ++++ ++ ++N L+ FC +L + ++T+ PDV+TFNTL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 232 ALGKEGNVKEAKNVLAVMMKQG---------------VKPDLFTYNSLMDGYCLVNEINK 276
L E + EA + M++ G + P + T+N+L++G CL + +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
A A++N M +G+ +V +Y I++G+CK ALNL ++ME I PD + YS++ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
LCK G S A L EM KG + FTYN ++D C A L + M ++ I P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
DV+T+N L+ KEG+L A+++ +++ + TYN MI G CK FD+A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 457 SEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
M PD +TF TII + +LLRE+ RGL+
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 174/334 (52%), Gaps = 20/334 (5%)
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF 226
K + DA + F MV + V N ++ F + + A L +M + I ++ +F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
N L+ + + + + K G +PD+ T+N+L+ G CL + I++A+A+ M +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
G EA+ LF +M I + P IT+++LI+GLC GR+
Sbjct: 205 TGFL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A LV++M KG D TY ++++ +CK A+ L KM + I+PDVV Y+ ++D
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
LCK+G +AQ +F +++ KG V TYN MI+G C G + +A LL +M ++ P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 467 DAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
D +TF +I A ++G ++AEKL EM+ R +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 282/511 (55%), Gaps = 36/511 (7%)
Query: 14 LRLNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFG----------Q 63
L + +F ++ K H LS S+ S F +L P ++ F +
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSL-------STFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 64 IPSAFSVLGKILKKGY---------------RPDAVTLTTLIKGLCLKGEVRRALQFHDD 108
I A ++ G +++ G+ P +T TLI GLCL+G V A +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 109 VVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
+V +G ++ V+YGT++ G+C+MG T+++L LL ++E +KP+VV+Y+ IID LCKD
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
SDA LFSEM+ K ++P+V TYN ++ GFC G+ +A LL +M + I PDV+TFN
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
L+ A KEG + EA+ + M+ + + PD TYNS++ G+C N + A + + MA
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA--- 428
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+P+V +++ II C+ K VDE + L E+ ++ +T TY++LI G C+ ++ A
Sbjct: 429 -SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
+L EM + G D T N LL C++ +++A+ L + ++ I D V YNI++ G+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
CK ++ A ++F L I G V+TYN+MI+G C + +A L +M+D G PD
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 469 ITFETIICALFEKGDNYKAEKLLREMMARGL 499
T+ T+I + G+ K+ +L+ EM + G
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 249/492 (50%), Gaps = 42/492 (8%)
Query: 18 NFPVVSKPSFHSHSL-----SPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLG 72
+ P +++ +F L S + DDAI F+ ++ + P + ++ ++ F +
Sbjct: 61 SLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMN 120
Query: 73 K--ILKKGYRP--------DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+ + YR + + LIK C ++ +L + GF+ + V++
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVK-------------------PNVVMYNTIIDSL 163
TL+ GLC + +L L G++V+ P V+ +NT+I+ L
Sbjct: 181 TLLHGLCLEDRISEALALF----GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGL 236
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
C + V +A L ++MV K + DVVTY +++ G C +G K A LL +M +I PDV
Sbjct: 237 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
+ ++ ++D L K+G+ +A+ + + M+++G+ P++FTYN ++DG+C + A +L
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
M +R + P+V +++ +I K + EA L EM I PDT+TY+S+I G CK R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
A + D M D T+N+++DV C++ VD+ + L +++ +G+ + TYN
Sbjct: 417 FDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 404 LMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
L+ G C+ L AQ++FQ+++ G T NI++ G C+ +EAL L ++
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 464 CIPDAITFETII 475
D + + II
Sbjct: 533 IDLDTVAYNIII 544
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 211/413 (51%), Gaps = 19/413 (4%)
Query: 102 ALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIID 161
A+ F D +V V +I RM + ++ L R++E + N+ +N +I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK---------------E 206
C +S + + F ++ PDVVT+N+LL+G C+ ++ E
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A L D+M + P VITFNTL++ L EG V EA ++ M+ +G+ D+ TY ++++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G C + + A+ +L+ M + + P+V YS II LCK+ +A LF+EM I P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
+ TY+ +IDG C GR S A L+ +M + D T+N+L+ K + +A L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+M + I PD VTYN ++ G CK R +A+ +F DL+ V T+N +I+ C+
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMASP---DVVTFNTIIDVYCRA 445
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
DE + LL E+ +G + + T+ T+I E + A+ L +EM++ G+
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 181/344 (52%), Gaps = 19/344 (5%)
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A +L+ +M ++++ ++ ++N L+ FC +L + ++T+ PDV+TFNTL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 232 ALGKEGNVKEAKNVLAVMMKQG---------------VKPDLFTYNSLMDGYCLVNEINK 276
L E + EA + M++ G + P + T+N+L++G CL + +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
A A++N M +G+ +V +Y I++G+CK ALNL ++ME I PD + YS++ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
LCK G S A L EM KG + FTYN ++D C A L + M ++ I P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
DV+T+N L+ KEG+L A+++ +++ + TYN MI G CK FD+A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 457 SEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
M PD +TF TII + +LLRE+ RGL+
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 174/334 (52%), Gaps = 20/334 (5%)
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF 226
K + DA + F MV + V N ++ F + + A L +M + I ++ +F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
N L+ + + + + K G +PD+ T+N+L+ G CL + I++A+A+ M +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
G EA+ LF +M I + P IT+++LI+GLC GR+
Sbjct: 205 TGFL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A LV++M KG D TY ++++ +CK A+ L KM + I+PDVV Y+ ++D
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
LCK+G +AQ +F +++ KG V TYN MI+G C G + +A LL +M ++ P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 467 DAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
D +TF +I A ++G ++AEKL EM+ R +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 301 bits (771), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 278/486 (57%), Gaps = 17/486 (3%)
Query: 1 MMLSSPRVSMSSFLRLNNFPVVSKPSFHSHS--LSPSIHNA--DDAISIFNRLLGTSPTP 56
+ +S+PR + S L L F + +F S+ L +HN +DA+ +F R++ + P P
Sbjct: 25 LQISNPRTAAS--LSLCGFCFWIR-AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLP 81
Query: 57 SIIEFGQIPSAF----------SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFH 106
SII+F ++ S S+ ++ G P T ++ +CL + RA F
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 107 DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKD 166
++ GF + V++ +L+ G C + ++ L Q+ G KPNVV Y T+I LCK+
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF 226
+ ++ A LF++M P+VVTYN+L+ G C +G+ +A LL +M ++ I P+VITF
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
L+DA K G + EAK + VM++ V PD+FTY SL++G C+ +++A + M +
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
G PN Y+ +IHG CK+K V++ + +F EM ++ +TITY+ LI G C GR
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A E+ ++M ++ P D TYN LLD LC + V+KA+ + + MR + + ++VTY I++
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
G+CK G++++A ++F L KG V TY MI+G C+ GL EA +L +M++ G +P
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 467 DAITFE 472
+ ++
Sbjct: 502 NESVYK 507
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 228/521 (43%), Gaps = 73/521 (14%)
Query: 21 VVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYR 80
+V HSH I N A S+ S+ F AFS KIL+ G
Sbjct: 12 IVKGFHLHSHRHRLQISNPRTAASL-----------SLCGFCFWIRAFSSYRKILRNGLH 60
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHD--DVVARGFRLNQ----VSYGTLIKGLCRMGQT 134
LQF+D D+ R + + L+ + +M +
Sbjct: 61 ---------------------NLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRY 99
Query: 135 RASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSL 194
+ L Q++ + P + N ++ +C A +M+ PD+VT+ SL
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159
Query: 195 LYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV 254
L G+C ++++A L D++ P+V+T+ TL+ L K ++ A + M G
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219
Query: 255 KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN 314
+P++ TYN+L+ G C + A +L M +R + PNV +++ +I K + EA
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC 374
L+ M + + PD TY SLI+GLC G + A ++ M G ++ Y +L+ C
Sbjct: 280 LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
KS V+ + + +M +G+ + +TY +L+ G C GR AQEVF + + +R
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399
Query: 435 TYNIMINGLCKEGLFDEALAL-------------------------LSEMED-------- 461
TYN++++GLC G ++AL + L ++ED
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 462 --KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
KG P+ IT+ T+I +G ++A+ L ++M G L
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 254/438 (57%), Gaps = 10/438 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGK----------ILKKGYRPDAVTLTTL 89
DD++ +F ++ P PSI +F ++ SA S + K + G + T L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ C ++ AL F ++ G + V++G+L+ G CR + +L + Q+ G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
KPNVV+YNTIID LCK K V +A +L + M + PDVVTYNSL+ G C G+ +AT
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
++ MT++ I PDV TFN L+DA KEG V EA+ M+++ + PD+ TY+ L+ G C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ + +++A + M +G P+V +YSI+I+G CK+K V+ + LF EM ++ +T+
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+ LI G C++G+++ A E+ M G + TYN LL LC + ++KA+ + M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ G+ D+VTYNI++ G+CK G + +A +++ L +G + TY M+ GL K+GL
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 450 DEALALLSEMEDKGCIPD 467
EA AL +M++ G +P+
Sbjct: 483 READALFRKMKEDGILPN 500
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 206/380 (54%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+ L+ + +M + + L Q++ + N+ N +++ C+ +S A + +M+
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
P +VT+ SLL GFC ++ +A + D+M P+V+ +NT++D L K V
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
A ++L M K G+ PD+ TYNSL+ G C + A +++ M +R + P+V +++ +I
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
K V EA + EM + PD +TYS LI GLC R+ A E+ M +KG
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
D TY+ L++ CKS V+ + L +M +G+ + VTY IL+ G C+ G+L A+E+
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
F+ +V G H + TYN++++GLC G ++AL +L++M+ G D +T+ II + +
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 481 KGDNYKAEKLLREMMARGLL 500
G+ A + + +GL+
Sbjct: 444 AGEVADAWDIYCSLNCQGLM 463
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 178/331 (53%)
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
+ D+ +LF MV + P + ++ LL + + L ++M I ++ T N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
L++ + + A + L M+K G +P + T+ SL++G+C + + A+ + + M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
PNV Y+ II GLCK+K VD AL+L ME I PD +TY+SLI GLC SGR S A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
+V M + D FT+N+L+D K V +A ++M + + PD+VTY++L+ GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
C RL A+E+F +V KG V TY+I+ING CK + + L EM +G + +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 469 ITFETIICALFEKGDNYKAEKLLREMMARGL 499
+T+ +I G AE++ R M+ G+
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 272/469 (57%), Gaps = 18/469 (3%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSA------FSVLGKILKK----GYRPDAVTLTTL 89
+DAI +F+ ++ + P PSI++F ++ SA + V+ + KK G R D T +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I C +V AL ++ G+ ++V+ G+L+ G CR + ++ L+ ++
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
KP++V YN IIDSLCK K V+DAF+ F E+ K + P+VVTY +L+ G C + +A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
LL +M +K I P+VIT++ L+DA K G V EAK + M++ + PD+ TY+SL++G C
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
L + I++A + + M +G +V SY+ +I+G CK K V++ + LF EM ++ +T+
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY++LI G ++G + A E +M G D +TYN LL LC + ++KA+ + + M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ + + D+VTY ++ G+CK G+++ A +F L +KG + TY M++GLC +GL
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
E AL ++M+ +G + + T GD + +L+++M++ G
Sbjct: 487 HEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKKMLSCG 527
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 188/330 (56%)
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
+D ++DA +LFS+MV + P +V +N LL + + L +M I D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
TFN +++ V A ++L M+K G +PD T SL++G+C N ++ A+++++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
+ G P++ +Y+ II LCK K V++A + F E+E I P+ +TY++L++GLC S R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
S A L+ +M K + TY++LLD K+ V +A L ++M I PD+VTY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGC 464
++GLC R+ A ++F +V KG V +YN +ING CK ++ + L EM +G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 465 IPDAITFETIICALFEKGDNYKAEKLLREM 494
+ + +T+ T+I F+ GD KA++ +M
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 289 bits (739), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 271/473 (57%), Gaps = 13/473 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGK----------ILKKGYRPDAVTLTTL 89
++A+ +F ++ + P PSII+F ++ + + + K + G D T L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ C + A F ++ GF + V++ +LI G C + ++ ++ Q+ +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
KP+VVMY TIIDSLCK+ V+ A +LF +M + PDVV Y SL+ G C G+ ++A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
LL MT++ I PDVITFN L+DA KEG +A+ + M++ + P++FTY SL++G+C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ +++A + M +G P+V +Y+ +I+G CK K VD+A+ +F EM + +TI
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY++LI G + G+ + A E+ M ++G P + TYN LL LC + V KA+ + + M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 390 RDQ---GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+ + G+ P++ TYN+L+ GLC G+L+ A VF+D+ + + + TY I+I G+CK
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G A+ L + KG P+ +T+ T+I LF +G ++A L R+M G+
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 203/413 (49%), Gaps = 16/413 (3%)
Query: 101 RALQFHDDVVARGFRLNQVSYGTL------IKGLCRMGQT-RASLQLLRQVEG-----HL 148
R Q H + + +G +S+ L ++ C + R L L+ E H+
Sbjct: 4 RFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHM 63
Query: 149 VK----PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
V+ P+++ + +++ + K K NL + + VS D+ T N L+ FC Q
Sbjct: 64 VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQP 123
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
A+ L +M + PD++TF +L++ ++EA +++ M++ G+KPD+ Y ++
Sbjct: 124 YLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI 183
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+D C +N A+++ + M G+ P+V Y+ +++GLC + +A +L M KI
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
PD IT+++LID K G+ A EL +EM + FTY SL++ C VD+A
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
+ M +G PDVV Y L++G CK ++ +A ++F ++ KG TY +I G
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 445 KEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
+ G + A + S M +G P+ T+ ++ L G KA + +M R
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 138/263 (52%), Gaps = 13/263 (4%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK----------KGYRPDAVTLTTLI 90
DA ++N ++ S P+I + + + F + G + + KG PD V T+LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
G C +V A++ ++ +G N ++Y TLI+G ++G+ + ++ + V
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK---VSPDVVTYNSLLYGFCIVGQLKEA 207
PN+ YN ++ LC + V A +F +M ++ V+P++ TYN LL+G C G+L++A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+ ++M ++ + +IT+ ++ + K G VK A N+ + +GVKP++ TY +++ G
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 268 YCLVNEINKAIAILNSMAQRGVT 290
++A + M + GV+
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 163/491 (33%), Positives = 271/491 (55%), Gaps = 6/491 (1%)
Query: 16 LNNFPVVSKPSFHSHSLSPSIHNADDAIS---IFNRLLGTSPTPSIIEFGQIPSAFSVLG 72
++ F V+ K +H L P+I +D S + + T+ IE G + A +
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR-GFRLNQVSYGTLIKGLCRM 131
++++ G V++ ++ G C +G V AL F ++ + GF +Q ++ TL+ GLC+
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
G + +++++ + P+V YN++I LCK V +A + +M+ + SP+ VTY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
N+L+ C Q++EATEL +T K I PDV TFN+L+ L N + A + M
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
+G +PD FTYN L+D C ++++A+ +L M G +V +Y+ +I G CK E
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
A +F EME + +++TY++LIDGLCKS R+ A +L+D+M +GQ DK+TYNSLL
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
C+ + KA + + M G +PD+VTY L+ GLCK GR++ A ++ + + +KG ++
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEM-EDKGCIPDAITFETIICALFEKGDNYK-AEK 489
T YN +I GL ++ EA+ L EM E PDA+++ + L G + A
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVD 668
Query: 490 LLREMMARGLL 500
L E++ +G +
Sbjct: 669 FLVELLEKGFV 679
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 233/422 (55%), Gaps = 1/422 (0%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G +PD ++ L ++ H + G + + ++ LIK LCR Q R +
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+ +L + + + P+ + T++ ++ + A + +MV S V+ N +++G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 198 FCIVGQLKEATELLDEMTRKN-IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
FC G++++A + EM+ ++ PD TFNTLV+ L K G+VK A ++ VM+++G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
D++TYNS++ G C + E+ +A+ +L+ M R +PN +Y+ +I LCK V+EA L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
+ I+PD T++SLI GLC + A EL +EM +KG D+FTYN L+D LC
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
+D+A+ + K+M G V+TYN L+DG CK + + A+E+F ++ + G TY
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
N +I+GLCK ++A L+ +M +G PD T+ +++ GD KA +++ M +
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 497 RG 498
G
Sbjct: 569 NG 570
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 181/385 (47%), Gaps = 37/385 (9%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P +Y I+ L + D + +M + T+ L+ + E +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 211 LDEMTRK-NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
+D M + + PD +N +++ L ++K + A M G+KPD+ T+N L+ C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYS-------------------------------- 297
+++ AI +L M G+ P+ +++
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 298 ---IIIHGLCKNKMVDEALNLFAEMECIK-IIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+I+HG CK V++ALN EM PD T+++L++GLCK+G + HA E++D
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M +G D +TYNS++ LCK V +A+ + +M + P+ VTYN L+ LCKE +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
++ A E+ + L KG V T+N +I GLC A+ L EM KGC PD T+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 474 IICALFEKGDNYKAEKLLREMMARG 498
+I +L KG +A +L++M G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSG 465
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 268/475 (56%), Gaps = 17/475 (3%)
Query: 4 SSPRVSMSSFLRLNNFPVVSKPSFHSHSLSPSIH--NADDAISIFNRLLGTSPTPSIIEF 61
++P S+S +F S + L +H DDA S+F +L + P PSI++F
Sbjct: 28 NNPETSLS-----RSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDF 82
Query: 62 GQIPSAFSVLGK----------ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA 111
++ + + + K + G D + T LI C + AL ++
Sbjct: 83 TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 142
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
GFR + V+ G+L+ G C+ + + ++ L+ ++G PNVV+YNT+I+ LCK++ +++
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN 202
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A +F M K + D VTYN+L+ G G+ +A LL +M ++ I P+VI F L+D
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
KEGN+ EA+N+ M+++ V P++FTYNSL++G+C+ + A + + M +G P
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
+V +Y+ +I G CK+K V++ + LF EM ++ D TY++LI G C++G+++ A ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
+ M + G D TYN LLD LC + ++KA+ + + ++ + D++TYNI++ GLC+
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
+LK A +F+ L KG Y MI+GLC++GL EA L M++ G +P
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 176/329 (53%)
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
DAF+LF EM+ + P +V + +L + + L +M I D+ +F L+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
+ + A +L MMK G +P + T SL++G+C N +A+++++SM G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
PNV Y+ +I+GLCKN+ ++ AL +F ME I D +TY++LI GL SGR + A L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
+ +M + + + +L+D K ++ +A L K+M + + P+V TYN L++G C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
G L +A+ +F +V KG V TYN +I G CK ++ + L EM +G + DA T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 471 FETIICALFEKGDNYKAEKLLREMMARGL 499
+ T+I + G A+K+ M+ G+
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 173/342 (50%), Gaps = 11/342 (3%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQI----------PSAFSVLGKILKKGYRPDAVTLTTLI 90
+A+S+ + + G P+++ + + +A V + KKG R DAVT TLI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
GL G A + D+V R N + + LI + G + L +++ V
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
PNV YN++I+ C + DA +F MV K PDVVTYN+L+ GFC ++++ +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
EMT + + D T+NTL+ + G + A+ V M+ GV PD+ TYN L+D C
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+I KA+ ++ + + + ++ +Y+III GLC+ + EA LF + + PD I
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKG-QPADKFTYNSLLD 371
Y ++I GLC+ G A +L M G P+++ +L D
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRD 508
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%)
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
+ + A ++ M Q P++ ++ ++ + K D + L+ +ME + I D +++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
LI C+ R+S A L+ +M G T SLL+ C+ + +A++L M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
G P+VV YN +++GLCK L NA EVF + KG TYN +I+GL G + +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
LL +M + P+ I F +I ++G+ +A L +EM+ R ++
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 257/491 (52%), Gaps = 25/491 (5%)
Query: 35 SIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAV 84
S N A ++F +L + +P++ + G I A ++ K+ KG P+ V
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T TLI G C ++ + + +G N +SY +I GLCR G+ + +L ++
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
+ V YNT+I CK+ A + +EM+ ++P V+TY SL++ C G +
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
A E LD+M + + P+ T+ TLVD ++G + EA VL M G P + TYN+L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
++G+C+ ++ AIA+L M ++G++P+V SYS ++ G C++ VDEAL + EM I
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
PDTITYSSLI G C+ R A +L +EM G P D+FTY +L++ C ++KA+
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK-------GYHVTVRT-Y 436
L +M ++G+ PDVVTY++L++GL K+ R + A+ + L + YH +
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 437 NI-------MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEK 489
NI +I G C +G+ EA + M K PD + +I GD KA
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 490 LLREMMARGLL 500
L +EM+ G L
Sbjct: 662 LYKEMVKSGFL 672
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 241/432 (55%), Gaps = 7/432 (1%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL----NQV 119
I A S++ G+ P ++ ++ +R + F ++V N
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATI---RSKRNISFAENVFKEMLESQVSPNVF 206
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y LI+G C G +L L ++E PNVV YNT+ID CK + + D F L M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+K + P++++YN ++ G C G++KE + +L EM R+ D +T+NTL+ KEGN
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+A + A M++ G+ P + TY SL+ C +N+A+ L+ M RG+ PN +Y+ +
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
+ G + ++EA + EM P +TY++LI+G C +G++ A ++++M KG
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
D +Y+++L C+S+ VD+A+ + ++M ++GI+PD +TY+ L+ G C++ R K A +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
++++++ G TY +IN C EG ++AL L +EM +KG +PD +T+ +I L
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 480 EKGDNYKAEKLL 491
++ +A++LL
Sbjct: 567 KQSRTREAKRLL 578
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 216/380 (56%), Gaps = 1/380 (0%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL-VSDAFNLFSEM 179
+ ++K R+ +L ++ + H P V+ YN ++D+ + K +S A N+F EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ +VSP+V TYN L+ GFC G + A L D+M K P+V+T+NTL+D K +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+ +L M +G++P+L +YN +++G C + + +L M +RG + + +Y+ +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I G CK +AL + AEM + P ITY+SLI +CK+G ++ A E +D+M +G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
++ TY +L+D + ++++A + ++M D G P VVTYN L++G C G++++A
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
V +D+ KG V +Y+ +++G C+ DEAL + EM +KG PD IT+ ++I
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 480 EKGDNYKAEKLLREMMARGL 499
E+ +A L EM+ GL
Sbjct: 497 EQRRTKEACDLYEEMLRVGL 516
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 217/424 (51%), Gaps = 15/424 (3%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G A + ++L+ G P +T T+LI +C G + RA++F D + RG N+ +Y
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
TL+ G + G + ++LR++ + P+VV YN +I+ C + DA + +M
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
K +SPDVV+Y+++L GFC + EA + EM K I PD IT+++L+ ++ KE
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A ++ M++ G+ PD FTY +L++ YC+ ++ KA+ + N M ++GV P+V +YS++I+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYS---------------SLIDGLCKSGRISH 346
GL K EA L ++ + +P +TY SLI G C G ++
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTE 623
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A ++ + M K D YN ++ C++ + KA L K+M G VT L+
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
L KEG++ V ++ +++ +EG D L +L+EM G +P
Sbjct: 684 ALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
Query: 467 DAIT 470
+ I+
Sbjct: 744 NGIS 747
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 25/281 (8%)
Query: 37 HNADDAISIFNRLLGTSPTPSIIEFGQIPSAF----------SVLGKILKKGYRPDAVTL 86
++ D+A+ + ++ P I + + F + ++L+ G PD T
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
T LI C++G++ +ALQ H+++V +G + V+Y LI GL + +TR + +LL ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 147 HLVKPNVVMYNTIIDS---------------LCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
P+ V Y+T+I++ C ++++A +F M+ K PD Y
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
N +++G C G +++A L EM + +T LV AL KEG V E +V+ +++
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
+ L++ ++ + +L MA+ G PN
Sbjct: 704 SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 256/445 (57%), Gaps = 5/445 (1%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
S+ + ++ A +L ++ G PDA T +I GLC + A + + ++ RGF
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ ++YG L+ GLC++G+ A+ L ++ KP +V++NT+I + DA +
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 177 SEMVVK-KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
S+MV + PDV TYNSL+YG+ G + A E+L +M K P+V ++ LVD K
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G + EA NVL M G+KP+ +N L+ +C + I +A+ I M ++G P+V++
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
++ +I GLC+ + AL L +M ++ +T+TY++LI+ + G I A +LV+EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
+G P D+ TYNSL+ LC++ VDKA +L +KM G P ++ NIL++GLC+ G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A E +++V++G + T+N +INGLC+ G ++ L + +++ +G PD +TF T++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 476 CALFEKGDNYKAEKLLREMMARGLL 500
L + G Y A LL E + G +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 207/384 (53%), Gaps = 15/384 (3%)
Query: 36 IHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGK-----------ILKKGYRPDAV 84
I D A +F R+ P P I+ F + F G+ + G PD
Sbjct: 335 IGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T +LI G +G V AL+ D+ +G + N SY L+ G C++G+ + +L ++
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
+KPN V +N +I + CK+ + +A +F EM K PDV T+NSL+ G C V ++
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
K A LL +M + + + +T+NTL++A + G +KEA+ ++ M+ QG D TYNSL
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+ G C E++KA ++ M + G P+ S +I+I+GLC++ MV+EA+ EM
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
PD +T++SLI+GLC++GRI + ++ +G P D T+N+L+ LCK V A
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 385 LTKKMRDQGIQPDVVTYNILMDGL 408
L + + G P+ T++IL+ +
Sbjct: 691 LLDEGIEDGFVPNHRTWSILLQSI 714
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 226/464 (48%), Gaps = 35/464 (7%)
Query: 68 FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKG 127
FS G + GYR LI L GE + + + G + + ++++
Sbjct: 98 FSWTGS--QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD 155
Query: 128 LCRMGQTRASLQLLRQVEG-HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
+ G + +L+ ++ + +P YN +++ L A N+F +M+ +K+ P
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ T+ ++ FC V ++ A LL +MT+ P+ + + TL+ +L K V EA +L
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M G PD T+N ++ G C + IN+A ++N M RG P+ +Y +++GLCK
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 307 KMVDEALNLFAEM--------------------------------ECIKIIPDTITYSSL 334
VD A +LF + I+PD TY+SL
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I G K G + A E++ +M NKG + ++Y L+D CK +D+A + +M G+
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
+P+ V +N L+ CKE R+ A E+F+++ KG V T+N +I+GLC+ AL
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
LL +M +G + + +T+ T+I A +G+ +A KL+ EM+ +G
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 159/296 (53%), Gaps = 6/296 (2%)
Query: 206 EATELLDEMTR-KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+ T L+ EM + P ++N +++ L K A NV M+ + + P LFT+ +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
M +C VNEI+ A+++L M + G PN Y +IH L K V+EAL L EM +
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
+PD T++ +I GLCK RI+ A ++V+ M +G D TY L++ LCK VD A
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK-GYHVTVRTYNIMINGL 443
L ++ +P++V +N L+ G GRL +A+ V D+V G V TYN +I G
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 444 CKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
KEGL AL +L +M +KGC P+ ++ ++ + G +A +L EM A GL
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 252/443 (56%), Gaps = 15/443 (3%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A++I +++ PSI+ +I A +++ ++++ GY+PD VT TTL+
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GL + A+ + +V +G + + V+YG +I GLC+ G+ +L LL ++E ++
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+VV+YNTIID LCK K + DAF+LF++M K + PDV TYN L+ C G+ +A+ LL
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK-QGVKPDLFTYNSLMDGYCL 270
+M KNI PD++ FN L+DA KEG + EA+ + M+K + PD+ YN+L+ G+C
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+ + + + M+QRG+ N +Y+ +IHG + + D A +F +M + PD +T
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y+ L+DGLC +G + A + + M + D TY ++++ LCK+ V+ L +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+G++P+VVTY +M G C++G + A +F ++ G TYN +I ++G D
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG--D 546
Query: 451 EALA--LLSEMEDKGCIPDAITF 471
EA + L+ EM G DA TF
Sbjct: 547 EAASAELIKEMRSCGFAGDASTF 569
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/506 (29%), Positives = 273/506 (53%), Gaps = 46/506 (9%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSA-------------------------------- 67
DDAI +F ++ + P PSI+EF ++ SA
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 68 -------------FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF 114
++LGK++K GY P VTL +L+ G C + A+ D +V G+
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+ + V++ TL+ GL + + ++ L+ ++ +P++V Y +I+ LCK A N
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
L ++M K+ DVV YN+++ G C + +A +L ++M K I PDV T+N L+ L
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ-RGVTPNV 293
G +A +L+ M+++ + PDL +N+L+D + ++ +A + + M + + P+V
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+Y+ +I G CK K V+E + +F EM ++ +T+TY++LI G ++ +A + +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M + G D TYN LLD LC + +V+ A+ + + M+ + ++ D+VTY +++ LCK G+
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
+++ ++F L +KG V TY M++G C++GL +EA AL EM++ G +P++ T+ T
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 474 IICALFEKGDNYKAEKLLREMMARGL 499
+I A GD + +L++EM + G
Sbjct: 537 LIRARLRDGDEAASAELIKEMRSCGF 562
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 206/382 (53%), Gaps = 12/382 (3%)
Query: 129 CRMGQTRASLQLLR-----QVEGHLVK----PNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
CR +R LQ L+ + G +VK P++V ++ ++ ++ K +L +M
Sbjct: 42 CRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 101
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+S ++ TY+ + FC QL A +L +M + GP ++T N+L++ +
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
EA ++ M++ G +PD T+ +L+ G N+ ++A+A++ M +G P++ +Y +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I+GLCK D ALNL +ME KI D + Y+++IDGLCK + A++L ++M KG
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
D FTYN L+ LC A L M ++ I PD+V +N L+D KEG+L A++
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 420 VFQDLVIKGYHV--TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
++ ++V K H V YN +I G CK +E + + EM +G + + +T+ T+I
Sbjct: 342 LYDEMV-KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 478 LFEKGDNYKAEKLLREMMARGL 499
F+ D A+ + ++M++ G+
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGV 422
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 179/337 (53%), Gaps = 1/337 (0%)
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
+D + DA LF +MV + P +V ++ LL + + L ++M I ++
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
T++ ++ + + A +L MMK G P + T NSL++G+C N I++A+A+++ M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
+ G P+ +++ ++HGL ++ EA+ L M PD +TY ++I+GLCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
A L+++M AD YN+++D LCK H+D A L KM +GI+PDV TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM-EDKG 463
+ LC GR +A + D++ K + + +N +I+ KEG EA L EM + K
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 464 CIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
C PD + + T+I + + ++ REM RGL+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 197/390 (50%), Gaps = 13/390 (3%)
Query: 37 HN-ADDAISIFNRLLGTSPTPSIIEFGQIPS----------AFSVLGKILKKGYRPDAVT 85
HN A +A+++ R++ P ++ +G + + A ++L K+ K D V
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
T+I GLC + A + + +G + + +Y LI LC G+ + +LL +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV-VKKVSPDVVTYNSLLYGFCIVGQL 204
+ P++V +N +ID+ K+ + +A L+ EMV K PDVV YN+L+ GFC ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+E E+ EM+++ + + +T+ TL+ + + A+ V M+ GV PD+ TYN L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+DG C + A+ + M +R + ++ +Y+ +I LCK V++ +LF + +
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
P+ +TY++++ G C+ G A L EM G + TYN+L+ + +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
L K+MR G D T+ ++ + L +GRL
Sbjct: 553 LIKEMRSCGFAGDASTFGLVTNML-HDGRL 581
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 231/353 (65%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+I A +++ ++++ GY+PD VT TTLI GL L + A+ D +V RG + + V+YG
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
++ GLC+ G T +L LL ++E ++ NVV+Y+T+IDSLCK + DA NLF+EM K
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
V P+V+TY+SL+ C G+ +A+ LL +M + I P+++TF+ L+DA K+G + +A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ + M+K+ + P++FTY+SL++G+C+++ + +A +L M ++ PNV +Y+ +I+G
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
CK K VD+ + LF EM ++ +T+TY++LI G ++ +A + +M + G +
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
TYN LLD LCK+ + KA+ + + ++ ++PD+ TYNI+++G+CK G+ K
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 231/453 (50%), Gaps = 45/453 (9%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVL---------------------------- 71
DDAI +F + + P PSIIEF ++ SA + +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 72 -----------------GKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF 114
GK++K GY PD VTL +L+ G C + A+ D +V G+
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+ + V++ TLI GL + ++ L+ ++ +P++V Y +++ LCK A N
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
L ++M K+ +VV Y++++ C +A L EM K + P+VIT+++L+ L
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
G +A +L+ M+++ + P+L T+++L+D + ++ KA + M +R + PN+
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+YS +I+G C + EA + M +P+ +TY++LI+G CK+ R+ EL EM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+G + TY +L+ ++ D A + K+M G+ P+++TYNIL+DGLCK G+L
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
A VF+ L + TYNIMI G+CK G
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 208/381 (54%)
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ + L+ + +M + + ++E + N+ YN +I+ C+ +S A L +
Sbjct: 79 IEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGK 138
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M+ PD+VT NSLL GFC ++ +A L+D+M PD +TF TL+ L
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
EA ++ M+++G +PDL TY ++++G C + + A+ +LN M + NV YS
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I LCK + D+ALNLF EME + P+ ITYSSLI LC GR S A L+ +M +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+ T+++L+D K + KA L ++M + I P++ TY+ L++G C RL A+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
++ + ++ K V TYN +ING CK D+ + L EM +G + + +T+ T+I
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 479 FEKGDNYKAEKLLREMMARGL 499
F+ D A+ + ++M++ G+
Sbjct: 439 FQARDCDNAQMVFKQMVSVGV 459
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 193/350 (55%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P+++ ++ ++ ++ K + +M + +S ++ TYN L+ FC +L A L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
L +M + PD++T N+L++ + +A ++ M++ G KPD T+ +L+ G L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
N+ ++A+A+++ M QRG P++ +Y +++GLCK D ALNL +ME KI + +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
YS++ID LCK A L EM NKG + TY+SL+ LC A L M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
++ I P++VT++ L+D K+G+L A++++++++ + + TY+ +ING C
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
EA +L M K C+P+ +T+ T+I + K +L REM RGL+
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 10/210 (4%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI----------LKKGYRPDAVTLTTLI 90
DA + + ++ P+++ F + AF GK+ +K+ P+ T ++LI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
G C+ + A Q + ++ + N V+Y TLI G C+ + ++L R++ +
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
N V Y T+I + + +A +F +MV V P+++TYN LL G C G+L +A +
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
+ + R + PD+ T+N +++ + K G K
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 257/457 (56%), Gaps = 13/457 (2%)
Query: 20 PVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPS----------AFS 69
P +S+ + S S N ++ I +F +++ + P PSI++F ++ S S
Sbjct: 31 PFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVIS 90
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
+ + G D + +I LC AL ++ G+ + V+ +LI G C
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ + ++ L+ ++E +P+VV+YNTIID CK LV+DA LF M V D V
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
TYNSL+ G C G+ +A L+ +M ++I P+VITF ++D KEG EA + M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
++ V PD+FTYNSL++G C+ +++A +L+ M +G P+V +Y+ +I+G CK+K V
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
DE LF EM ++ DTITY+++I G ++GR A E+ M ++ P + TY+ L
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--PNIR-TYSIL 387
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
L LC + V+KA+ L + M+ I+ D+ TYNI++ G+CK G +++A ++F+ L KG
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
V +Y MI+G C++ +D++ L +M++ G +P
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 191/362 (52%), Gaps = 3/362 (0%)
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+ L +E + ++ YN +I+ LC+ A ++ +M+ PDVVT +SL+ G
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
FC ++ +A +L+ +M PDV+ +NT++D K G V +A + M + GV+ D
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
TYNSL+ G C + A ++ M R + PNV +++ +I K EA+ L+
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
EM + PD TY+SLI+GLC GR+ A +++D M KG D TYN+L++ CKS
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
VD+ L ++M +G+ D +TYN ++ G + GR AQE+F + +RTY+
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYS 385
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
I++ GLC ++AL L M+ D T+ +I + + G+ A L R + +
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 498 GL 499
GL
Sbjct: 446 GL 447
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 179/329 (54%)
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
+ + +LF +M+ + P +V ++ +L L M IG D+ ++N
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
+++ L + A +V+ MMK G +PD+ T +SL++G+C N + AI +++ M + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
P+V Y+ II G CK +V++A+ LF ME + D +TY+SL+ GLC SGR S A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
L+ +M + + T+ +++DV K +A+ L ++M + + PDV TYN L++GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
C GR+ A+++ +V KG V TYN +ING CK DE L EM +G + D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 469 ITFETIICALFEKGDNYKAEKLLREMMAR 497
IT+ TII F+ G A+++ M +R
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 180/338 (53%), Gaps = 5/338 (1%)
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ-----LKEATELLDEMTRKNIGPD 222
+ S A + +++K +P +V + S +G + L+E +L +M + P
Sbjct: 9 IASKANKFLNLCLLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPS 68
Query: 223 VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILN 282
++ F+ ++ + K N ++ M G+ DL++YN +++ C + A++++
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
M + G P+V + S +I+G C+ V +A++L ++ME + PD + Y+++IDG CK G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
++ A EL D M G AD TYNSL+ LC S A L + M + I P+V+T+
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
++D KEG+ A ++++++ + V TYN +INGLC G DEA +L M K
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 463 GCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
GC+PD +T+ T+I + + KL REM RGL+
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 256/470 (54%), Gaps = 11/470 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLG----------KILKKGYRPDAVTLTTL 89
D+ ++ +L P+I + ++ + + LG KI++ G PD T T+L
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL 259
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I G C + ++ A + +++ +G R N+V+Y LI GLC + ++ L +++
Sbjct: 260 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
P V Y +I SLC + S+A NL EM + P++ TY L+ C + ++A E
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
LL +M K + P+VIT+N L++ K G +++A +V+ +M + + P+ TYN L+ GYC
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
N ++KA+ +LN M +R V P+V +Y+ +I G C++ D A L + M ++PD
Sbjct: 440 KSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+S+ID LCKS R+ A +L D + KG + Y +L+D CK+ VD+A + +KM
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ P+ +T+N L+ GLC +G+LK A + + +V G TV T I+I+ L K+G F
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D A + +M G PDA T+ T I +G AE ++ +M G+
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 242/456 (53%), Gaps = 6/456 (1%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA 102
I +N LL S+ FG + V ++L+ P+ T ++ G C G V A
Sbjct: 183 IGCYNTLLN-----SLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDS 162
Q+ +V G + +Y +LI G C+ ++ ++ ++ + N V Y +I
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 163 LCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD 222
LC + + +A +LF +M + P V TY L+ C + EA L+ EM I P+
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 223 VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILN 282
+ T+ L+D+L + ++A+ +L M+++G+ P++ TYN+L++GYC I A+ ++
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
M R ++PN +Y+ +I G CK+ V +A+ + +M K++PD +TY+SLIDG C+SG
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
A+ L+ M+++G D++TY S++D LCKS V++A L + +G+ P+VV Y
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
L+DG CK G++ A + + ++ K T+N +I+GLC +G EA L +M
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 463 GCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
G P T +I L + GD A ++M++ G
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 222/412 (53%), Gaps = 1/412 (0%)
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
TL+ L G V Q + +++ N +Y ++ G C++G + Q + ++
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
+ P+ Y ++I C+ K + AF +F+EM +K + V Y L++G C+ ++ EA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+L +M P V T+ L+ +L EA N++ M + G+KP++ TY L+D
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
C + KA +L M ++G+ PNV +Y+ +I+G CK M+++A+++ ME K+ P+
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
T TY+ LI G CKS + A ++++M + D TYNSL+D C+S + D A L
Sbjct: 428 TRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
M D+G+ PD TY ++D LCK R++ A ++F L KG + V Y +I+G CK G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
DEA +L +M K C+P+++TF +I L G +A L +M+ GL
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 252/511 (49%), Gaps = 34/511 (6%)
Query: 24 KPSFHSHSLS----PSIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFS 69
KP+ H++++ S + A + ++L P++I + G I A
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
V+ + + P+ T LIKG C K V +A+ + ++ R + V+Y +LI G C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
R G ++ +LL + + P+ Y ++IDSLCK K V +A +LF + K V+P+VV
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
Y +L+ G+C G++ EA +L++M KN P+ +TFN L+ L +G +KEA + M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
+K G++P + T L+ + + A + M G P+ H+Y+ I C+ +
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
+A ++ A+M + PD TYSSLI G G+ + A++++ M + G + T+ SL
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 370 LDVLCKSHH------------------VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
+ L + + D + L +KM + + P+ +Y L+ G+C+
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 412 GRLKNAQEVFQDLVI-KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
G L+ A++VF + +G + +N +++ CK +EA ++ +M G +P +
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 471 FETIICALFEKGDNYKAEKLLREMMARGLLE 501
+ +IC L++KG+ + + + ++ G E
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 177/310 (57%), Gaps = 1/310 (0%)
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
YN+LL G + E ++ EM + P++ T+N +V+ K GNV+EA ++ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+ G+ PD FTY SL+ GYC +++ A + N M +G N +Y+ +IHGLC + +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
EA++LF +M+ + P TY+ LI LC S R S A LV EM G + TY L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
D LC +KA L +M ++G+ P+V+TYN L++G CK G +++A +V + + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
RTYN +I G CK + +A+ +L++M ++ +PD +T+ ++I G+ A +L
Sbjct: 426 PNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 491 LREMMARGLL 500
L M RGL+
Sbjct: 485 LSLMNDRGLV 494
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 221/466 (47%), Gaps = 54/466 (11%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ A VL K+L++ PD VT +LI G C G A + + RG +Q +Y +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
+I LC+ + + L +E V PNVVMY +ID CK V +A + +M+ K
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR--------------------------- 216
P+ +T+N+L++G C G+LKEAT L ++M +
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 217 --------KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
PD T+ T + +EG + +A++++A M + GV PDLFTY+SL+ GY
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSY-SIIIH--------------GLC--KNKM-VD 310
+ + N A +L M G P+ H++ S+I H LC N M D
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH-NKGQPADKFTYNSL 369
+ L +M + P+ +Y LI G+C+ G + A ++ D M N+G + +N+L
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
L CK ++A + M G P + + +L+ GL K+G + VFQ+L+ GY
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ + I+I+G+ K+GL + L + ME GC + T+ +I
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 185/344 (53%), Gaps = 1/344 (0%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
YNT+++SL + LV + ++ EM+ KV P++ TYN ++ G+C +G ++EA + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
+ PD T+ +L+ + ++ A V M +G + + Y L+ G C+ I+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
+A+ + M P V +Y+++I LC ++ EALNL EME I P+ TY+ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
D LC + A EL+ +M KG + TYN+L++ CK ++ A+ + + M + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
P+ TYN L+ G CK + A V ++ + V TYN +I+G C+ G FD A L
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
LS M D+G +PD T+ ++I +L + +A L + +G+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 169/396 (42%), Gaps = 64/396 (16%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTL 89
++A +F+ L P+++ + G++ A +L K+L K P+++T L
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I GLC G+++ A + +V G + + LI L + G + +Q+
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF----------- 198
KP+ Y T I + C++ + DA ++ ++M VSPD+ TY+SL+ G+
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 199 ---------------------------------------CIVGQLKE---ATELLDEMTR 216
C + + E ELL++M
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK-QGVKPDLFTYNSLMDGYCLVNEIN 275
++ P+ ++ L+ + + GN++ A+ V M + +G+ P +N+L+ C + + N
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
+A +++ M G P + S ++I GL K + ++F + D + + +I
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
DG+ K G + +EL + M G TY+ L++
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLC------LKG------------EVRR 101
+ GQ AF VL ++ G P T +LIK L KG E
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 102 ALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE-GHLVKPNVVMYNTII 160
++ + +V N SY LI G+C +G R + ++ ++ + P+ +++N ++
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 161 DSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG 220
CK K ++A + +M+ P + + L+ G G+ + T + + +
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 221 PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
D + + ++D +GK+G V+ + VM K G K TY+ L++G
Sbjct: 864 EDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 230/403 (57%), Gaps = 3/403 (0%)
Query: 97 GEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMY 156
GE+ +F +++V G + + TLI+G CR+G+TR + ++L +EG P+V+ Y
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
N +I CK +++A ++ M VSPDVVTYN++L C G+LK+A E+LD M +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
++ PDVIT+ L++A ++ V A +L M +G PD+ TYN L++G C +++
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
AI LN M G PNV +++II+ +C +A L A+M P +T++ LI+
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
LC+ G + A +++++M G + +YN LL CK +D+AI ++M +G P
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
D+VTYN ++ LCK+G++++A E+ L KG + TYN +I+GL K G +A+ LL
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 457 SEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EM K PD IT+ +++ L +G +A K E G+
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 247/457 (54%), Gaps = 13/457 (2%)
Query: 56 PSIIEFGQIPSAFSVLGKILK----------KGYRPDAVTLTTLIKGLCLKGEVRRALQF 105
P II + F LGK K G PD +T +I G C GE+ AL
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 106 HDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK 165
D + + V+Y T+++ LC G+ + ++++L ++ P+V+ Y +I++ C+
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 166 DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVIT 225
D V A L EM + +PDVVTYN L+ G C G+L EA + L++M P+VIT
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
N ++ ++ G +A+ +LA M+++G P + T+N L++ C + +AI IL M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
Q G PN SY+ ++HG CK K +D A+ M PD +TY++++ LCK G++
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
A E+++++ +KG TYN+++D L K+ KAI L +MR + ++PD +TY+ L+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
GL +EG++ A + F + G T+N ++ GLCK D A+ L M ++GC
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
P+ ++ +I L +G +A +LL E+ +GL++K
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 218/394 (55%), Gaps = 3/394 (0%)
Query: 106 HDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK 165
H V F L V ++ + R G+ + L + H P+++ T+I C+
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 166 DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVIT 225
A + + PDV+TYN ++ G+C G++ A +LD M+ + PDV+T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVT 206
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
+NT++ +L G +K+A VL M+++ PD+ TY L++ C + + A+ +L+ M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
RG TP+V +Y+++++G+CK +DEA+ +M P+ IT++ ++ +C +GR
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
A +L+ +M KG T+N L++ LC+ + +AI + +KM G QP+ ++YN L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
G CKE ++ A E + +V +G + + TYN M+ LCK+G ++A+ +L+++ KGC
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
P IT+ T+I L + G KA KLL EM A+ L
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 217/399 (54%), Gaps = 13/399 (3%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTL 89
++A+S+ +R+ S +P ++ + G++ A VL ++L++ PD +T T L
Sbjct: 189 NNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I+ C V A++ D++ RG + V+Y L+ G+C+ G+ +++ L +
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+PNV+ +N I+ S+C DA L ++M+ K SP VVT+N L+ C G L A +
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
+L++M + P+ +++N L+ KE + A L M+ +G PD+ TYN+++ C
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
++ A+ ILN ++ +G +P + +Y+ +I GL K +A+ L EM + PDTI
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TYSSL+ GL + G++ A + E G + T+NS++ LCKS D+AI M
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
++G +P+ +Y IL++GL EG K A E+ +L KG
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 241/436 (55%), Gaps = 10/436 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVL----------GKILKKGYRPDAVTLTTL 89
+DA ++F ++ + P PSI++F ++ +A + L K+ G D + T L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I C + AL ++ G+ + V++G+L+ G C + + + L+ +
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+PNVV+YNT+ID LCK+ ++ A L +EM K + DVVTYN+LL G C G+ +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
+L +M +++I PDV+TF L+D K+GN+ EA+ + M++ V P+ TYNS+++G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ + A + MA +G PNV +Y+ +I G CK +MVDE + LF M C D
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY++LI G C+ G++ A ++ M ++ D T+ LL LC + ++ A+ M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
R+ +V YNI++ GLCK +++ A E+F L ++G RTY IMI GLCK G
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 450 DEALALLSEMEDKGCI 465
EA L+ M+++G I
Sbjct: 473 READELIRRMKEEGII 488
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 175/327 (53%)
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
DAF LF EMV + P +V + LL + + + +M I D+ +F L+
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
+ + A +VL MMK G +P + T+ SL+ G+CLVN I A +++ M + G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
PNV Y+ +I GLCKN ++ AL L EME + D +TY++L+ GLC SGR S A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
+ +M + D T+ +L+DV K ++D+A L K+M + P+ VTYN +++GLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
GRL +A++ F + KG V TYN +I+G CK + DE + L M +G D T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 471 FETIICALFEKGDNYKAEKLLREMMAR 497
+ T+I + G A + M++R
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%)
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
++A LF EM + +P + ++ L+ R +M G D +++ L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
+ C+ + A+++ KM G +P +VT+ L+ G C R+ +A + +V GY
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEK 489
V YN +I+GLCK G + AL LL+EME KG D +T+ T++ L G A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 490 LLREMMARGL 499
+LR+MM R +
Sbjct: 233 MLRDMMKRSI 242
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 337 GLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
G S R A+ L EM H++ P+ + LL + I ++KM GI
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPS-IVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
D+ ++ IL+ C+ RL A V ++ GY ++ T+ +++G C +A +L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ M G P+ + + T+I L + G+ A +LL EM +GL
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 256/466 (54%), Gaps = 13/466 (2%)
Query: 14 LRLNNFPVVSKPSFHSHSLSPSIHNA--DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVL 71
LR+ N S S + L +H+ +DA+++F + + P PSI++F ++ A + L
Sbjct: 33 LRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKL 92
Query: 72 GK----------ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
K + G D + TTLI C + AL ++ GF + V++
Sbjct: 93 NKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTF 152
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
G+L+ G C + + ++ L+ Q+ G +PNVV+YNTIIDSLC+ V+ A ++ M
Sbjct: 153 GSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ PDVVTYNSL+ G + +L +M R I PDVITF+ L+D GKEG + E
Sbjct: 213 MGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLE 272
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
AK M+++ V P++ TYNSL++G C+ +++A +LN + +G PN +Y+ +I+
Sbjct: 273 AKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLIN 332
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
G CK K VD+ + + M + DT TY++L G C++G+ S A +++ M + G
Sbjct: 333 GYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D +T+N LLD LC + KA+ + ++ ++TYNI++ GLCK ++++A +F
Sbjct: 393 DMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME-DKGCIP 466
L +KG V TY M+ GL ++ L+ EA L +M+ + G +P
Sbjct: 453 CSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 172/330 (52%)
Query: 170 SDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTL 229
+DA LF +M P +V ++ LL + + + L + I D+ +F TL
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+D + + A + L MMK G +P + T+ SL++G+C VN +A+++++ + G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
PNV Y+ II LC+ V+ AL++ M+ + I PD +TY+SLI L SG +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 350 LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
++ +M G D T+++L+DV K + +A +M + + P++VTYN L++GLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 410 KEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
G L A++V LV KG+ TYN +ING CK D+ + +L M G D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 470 TFETIICALFEKGDNYKAEKLLREMMARGL 499
T+ T+ + G AEK+L M++ G+
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 151/273 (55%)
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
+ +A L +M + P ++ F+ L+ A+ K + ++ + G+ DL+++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
+L+D +C ++ A++ L M + G P++ ++ +++G C EA++L ++ +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
P+ + Y+++ID LC+ G+++ A +++ M G D TYNSL+ L S +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
+ M GI PDV+T++ L+D KEG+L A++ + +++ + + + TYN +ING
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 443 LCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
LC GL DEA +L+ + KG P+A+T+ T+I
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 118/227 (51%)
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
+ N A+ + MA+ P++ +S ++ + K + ++LF +E + I D +++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
+LID C+ R+S A + +M G T+ SL++ C + +A++L ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
G +P+VV YN ++D LC++G++ A +V + + G V TYN +I L G + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+LS+M G PD ITF +I ++G +A+K EM+ R +
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 239/441 (54%), Gaps = 11/441 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTL 89
D A+ + L+ P P +I + + A LGK++ +G PD+ T TL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I G C G V+ A + D V GF +Q +Y +LI GLC G+T +L L + G +
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
KPNV++YNT+I L ++ +A L +EM K + P+V T+N L+ G C +G + +A
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L+ M K PD+ TFN L+ + ++ A +L VM+ GV PD++TYNSL++G C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
++ + +M ++G PN+ +++I++ LC+ + +DEAL L EM+ + PD +
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF-TYNSLLDVLCKSHHVDKAIALTKK 388
T+ +LIDG CK+G + A+ L +M + + TYN ++ + +V A L ++
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
M D+ + PD TY +++DG CK G + + +++ G+ ++ T +IN LC E
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 449 FDEALALLSEMEDKGCIPDAI 469
EA ++ M KG +P+A+
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAV 708
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 250/499 (50%), Gaps = 45/499 (9%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPS----------AFSVLGKILKKGYRPDAVTLTTLI 90
+A+++F R+ P++ + I S A V ++ +G PD + T +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKG----------------------- 127
K C AL+ +++ ++G +N V+Y T++ G
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 128 ------------LCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
LC+ G + +LL +V V PN+ YN I LC+ + A +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
++ + PDV+TYN+L+YG C + +EA L +M + + PD T+NTL+ K
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G V+ A+ ++ + G PD FTY SL+DG C E N+A+A+ N +G+ PNV
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y+ +I GL M+ EA L EM +IP+ T++ L++GLCK G +S A LV M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
+KG D FT+N L+ ++ A+ + M D G+ PDV TYN L++GLCK + +
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ E ++ +V KG + T+NI++ LC+ DEAL LL EM++K PDA+TF T+I
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 476 CALFEKGDNYKAEKLLREM 494
+ GD A L R+M
Sbjct: 574 DGFCKNGDLDGAYTLFRKM 592
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 241/440 (54%), Gaps = 1/440 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ A ++G ++++G +PD +T LI GLC + + A + +V G + +Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
TLI G C+ G + + +++ + P+ Y ++ID LC + + A LF+E +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
K + P+V+ YN+L+ G G + EA +L +EM+ K + P+V TFN LV+ L K G V +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A ++ VM+ +G PD+FT+N L+ GY ++ A+ IL+ M GV P+V++Y+ +++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
GLCK ++ + + M P+ T++ L++ LC+ ++ A L++EM NK
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ-GIQPDVVTYNILMDGLCKEGRLKNAQEV 420
D T+ +L+D CK+ +D A L +KM + + TYNI++ ++ + A+++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
FQ++V + TY +M++G CK G + L EM + G IP T +I L
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684
Query: 481 KGDNYKAEKLLREMMARGLL 500
+ Y+A ++ M+ +GL+
Sbjct: 685 EDRVYEAAGIIHRMVQKGLV 704
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 249/487 (51%), Gaps = 5/487 (1%)
Query: 14 LRLNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGK 73
+R+ +F S+P H+ ++N N + + E + + GK
Sbjct: 151 IRMKSFCKTSRP----HAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQ 133
+L G T L++ LC KG+V+ + D V+ RG N +Y I+GLC+ G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 134 TRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
+++++ + KP+V+ YN +I LCK+ +A +MV + + PD TYN+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
L+ G+C G ++ A ++ + PD T+ +L+D L EG A + + +G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
+KP++ YN+L+ G I +A + N M+++G+ P V +++I+++GLCK V +A
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
L M PD T++ LI G ++ +A E++D M + G D +TYNSLL+ L
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
CK+ + + K M ++G P++ T+NIL++ LC+ +L A + +++ K +
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI-TFETIICALFEKGDNYKAEKLLR 492
T+ +I+G CK G D A L +ME+ + + T+ II A EK + AEKL +
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 493 EMMARGL 499
EM+ R L
Sbjct: 627 EMVDRCL 633
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 219/417 (52%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ A +V ++ P + ++ L G +A + + + RG + S+
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+K C+ + A+L+LL + + NVV Y T++ ++ ++ + LF +M+
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
VS + T+N LL C G +KE +LLD++ ++ + P++ T+N + L + G +
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A ++ +++QG KPD+ TYN+L+ G C ++ +A L M G+ P+ ++Y+ +I
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
G CK MV A + + +PD TY SLIDGLC G + A L +E KG
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
+ YN+L+ L + +A L +M ++G+ P+V T+NIL++GLCK G + +A +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
+ ++ KGY + T+NI+I+G + + AL +L M D G PD T+ +++ L
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 200/380 (52%)
Query: 96 KGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVM 155
KG+V+ A+ + + SY ++ L G + ++ ++ + P+V
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYS 148
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
+ + S CK A L + M + +VV Y +++ GF E EL +M
Sbjct: 149 FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
+ + TFN L+ L K+G+VKE + +L ++K+GV P+LFTYN + G C E++
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
A+ ++ + ++G P+V +Y+ +I+GLCKN EA +M + PD+ TY++LI
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
G CK G + A +V + G D+FTY SL+D LC ++A+AL + +GI+
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
P+V+ YN L+ GL +G + A ++ ++ KG V+T+NI++NGLCK G +A L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 456 LSEMEDKGCIPDAITFETII 475
+ M KG PD TF +I
Sbjct: 449 VKVMISKGYFPDIFTFNILI 468
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 203/419 (48%), Gaps = 9/419 (2%)
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL---- 141
+T +IK C K ++ F+ GF+ +Y ++I+ L G+ A ++L
Sbjct: 10 VTAVIK--CQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR 67
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
V H+++ +Y + + + V +A N+F M P V +YN+++
Sbjct: 68 ENVGNHMLEG---VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 124
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
G +A ++ M + I PDV +F + + K A +L M QG + ++ Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
+++ G+ N + + M GV+ + +++ ++ LCK V E L ++
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
++P+ TY+ I GLC+ G + A +V + +G D TYN+L+ LCK+ +
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
A KM ++G++PD TYN L+ G CK G ++ A+ + D V G+ TY +I+
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
GLC EG + ALAL +E KG P+ I + T+I L +G +A +L EM +GL+
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 161/372 (43%), Gaps = 65/372 (17%)
Query: 42 AISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK----------KGYRPDAVTLTTLIK 91
A+++FN LG P++I + + S G IL+ KG P+ T L+
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GLC G V A ++++G+ + ++ LI G + +L++L + + V P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+V YN++++ LCK D + MV K +P++ T+N LL C +L EA LL
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEG---------------------------------- 237
+EM K++ PD +TF TL+D K G
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 238 --NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN--- 292
NV A+ + M+ + + PD +TY ++DG+C +N L M + G P+
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 293 -------------VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
V+ + IIH + + +V EA+N +++ ++ + L+ C
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKKSC 734
Query: 340 KSGRISHAWELV 351
+ +A+EL+
Sbjct: 735 IT---YYAYELL 743
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 240/442 (54%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ + G+I A +L + KGY PD ++ +T++ G C GE+ + + + + +G + N
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
YG++I LCR+ + + + ++ + P+ V+Y T+ID CK + A F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM + ++PDV+TY +++ GFC +G + EA +L EM K + PD +TF L++ K G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
++K+A V M++ G P++ TY +L+DG C +++ A +L+ M + G+ PN+ +Y+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
I++GLCK+ ++EA+ L E E + DT+TY++L+D CKSG + A E++ EM K
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 358 GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
G T+N L++ C ++ L M +GI P+ T+N L+ C LK A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+++D+ +G +TY ++ G CK EA L EM+ KG T+ +I
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 478 LFEKGDNYKAEKLLREMMARGL 499
++ +A ++ +M GL
Sbjct: 676 FLKRKKFLEAREVFDQMRREGL 697
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 254/494 (51%), Gaps = 19/494 (3%)
Query: 22 VSKPSFHSHSLSPSIHNADDAISIFNRLL------GTSPT------PSIIEFGQIPSAFS 69
V++ S P ++ D + F+ L+ G+ P +++FG + A
Sbjct: 137 VAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARR 196
Query: 70 VLGKILKKGYRPDA----VTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLI 125
V K+L G V LT L K C K A+ + G N SY +I
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKD-CYKTAT--AIIVFREFPEVGVCWNVASYNIVI 253
Query: 126 KGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
+C++G+ + + LL +E P+V+ Y+T+++ C+ + + L M K +
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
P+ Y S++ C + +L EA E EM R+ I PD + + TL+D K G+++ A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M + + PD+ TY +++ G+C + ++ +A + + M +G+ P+ +++ +I+G CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+ +A + M P+ +TY++LIDGLCK G + A EL+ EM G + FT
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
YNS+++ LCKS ++++A+ L + G+ D VTY LMD CK G + AQE+ ++++
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY 485
KG T+ T+N+++NG C G+ ++ LL+ M KG P+A TF +++ + +
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 486 KAEKLLREMMARGL 499
A + ++M +RG+
Sbjct: 614 AATAIYKDMCSRGV 627
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 225/413 (54%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
FG++ + ++ + +KG +P++ ++I LC ++ A + +++ +G + V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
Y TLI G C+ G RA+ + ++ + P+V+ Y II C+ + +A LF EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
K + PD VT+ L+ G+C G +K+A + + M + P+V+T+ TL+D L KEG++
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
A +L M K G++P++FTYNS+++G C I +A+ ++ G+ + +Y+ +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
+ CK+ +D+A + EM + P +T++ L++G C G + +L++ M KG
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
+ T+NSL+ C +++ A A+ K M +G+ PD TY L+ G CK +K A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
+FQ++ KG+ V+V TY+++I G K F EA + +M +G D F+
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 183/352 (51%), Gaps = 10/352 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK----------KGYRPDAVTLTTLIK 91
A F + TP ++ + I S F +G +++ KG PD+VT T LI
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
G C G ++ A + H+ ++ G N V+Y TLI GLC+ G ++ +LL ++ ++P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
N+ YN+I++ LCK + +A L E ++ D VTY +L+ +C G++ +A E+L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
EM K + P ++TFN L++ G +++ + +L M+ +G+ P+ T+NSL+ YC+
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
N + A AI M RGV P+ +Y ++ G CK + + EA LF EM+ TY
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
S LI G K + A E+ D+M +G ADK ++ D K D +
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS-HHVDKAIAL 385
D + L G + A + ++M N G + N L L K + AI +
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
++ + G+ +V +YNI++ +C+ GR+K A + + +KGY V +Y+ ++NG C+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
G D+ L+ M+ KG P++ + +II L +AE+ EM+ +G+L
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAF----------SVLGKILKKGYRPDAVTLTTL 89
D A I +LG P+I+ F + + F +L +L KG P+A T +L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+K C++ ++ A + D+ +RG + +Y L+KG C+ + + L ++++G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
+V Y+ +I K K +A +F +M + ++ D
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 240/442 (54%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ + G+I A +L + KGY PD ++ +T++ G C GE+ + + + + +G + N
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
YG++I LCR+ + + + ++ + P+ V+Y T+ID CK + A F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM + ++PDV+TY +++ GFC +G + EA +L EM K + PD +TF L++ K G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
++K+A V M++ G P++ TY +L+DG C +++ A +L+ M + G+ PN+ +Y+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
I++GLCK+ ++EA+ L E E + DT+TY++L+D CKSG + A E++ EM K
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 358 GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
G T+N L++ C ++ L M +GI P+ T+N L+ C LK A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+++D+ +G +TY ++ G CK EA L EM+ KG T+ +I
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 478 LFEKGDNYKAEKLLREMMARGL 499
++ +A ++ +M GL
Sbjct: 676 FLKRKKFLEAREVFDQMRREGL 697
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 254/494 (51%), Gaps = 19/494 (3%)
Query: 22 VSKPSFHSHSLSPSIHNADDAISIFNRLL------GTSPT------PSIIEFGQIPSAFS 69
V++ S P ++ D + F+ L+ G+ P +++FG + A
Sbjct: 137 VAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARR 196
Query: 70 VLGKILKKGYRPDA----VTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLI 125
V K+L G V LT L K C K A+ + G N SY +I
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKD-CYKTAT--AIIVFREFPEVGVCWNVASYNIVI 253
Query: 126 KGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
+C++G+ + + LL +E P+V+ Y+T+++ C+ + + L M K +
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
P+ Y S++ C + +L EA E EM R+ I PD + + TL+D K G+++ A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M + + PD+ TY +++ G+C + ++ +A + + M +G+ P+ +++ +I+G CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+ +A + M P+ +TY++LIDGLCK G + A EL+ EM G + FT
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
YNS+++ LCKS ++++A+ L + G+ D VTY LMD CK G + AQE+ ++++
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY 485
KG T+ T+N+++NG C G+ ++ LL+ M KG P+A TF +++ + +
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 486 KAEKLLREMMARGL 499
A + ++M +RG+
Sbjct: 614 AATAIYKDMCSRGV 627
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 225/413 (54%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
FG++ + ++ + +KG +P++ ++I LC ++ A + +++ +G + V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
Y TLI G C+ G RA+ + ++ + P+V+ Y II C+ + +A LF EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
K + PD VT+ L+ G+C G +K+A + + M + P+V+T+ TL+D L KEG++
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
A +L M K G++P++FTYNS+++G C I +A+ ++ G+ + +Y+ +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
+ CK+ +D+A + EM + P +T++ L++G C G + +L++ M KG
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
+ T+NSL+ C +++ A A+ K M +G+ PD TY L+ G CK +K A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
+FQ++ KG+ V+V TY+++I G K F EA + +M +G D F+
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 183/352 (51%), Gaps = 10/352 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK----------KGYRPDAVTLTTLIK 91
A F + TP ++ + I S F +G +++ KG PD+VT T LI
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
G C G ++ A + H+ ++ G N V+Y TLI GLC+ G ++ +LL ++ ++P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
N+ YN+I++ LCK + +A L E ++ D VTY +L+ +C G++ +A E+L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
EM K + P ++TFN L++ G +++ + +L M+ +G+ P+ T+NSL+ YC+
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
N + A AI M RGV P+ +Y ++ G CK + + EA LF EM+ TY
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
S LI G K + A E+ D+M +G ADK ++ D K D +
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS-HHVDKAIAL 385
D + L G + A + ++M N G + N L L K + AI +
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
++ + G+ +V +YNI++ +C+ GR+K A + + +KGY V +Y+ ++NG C+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
G D+ L+ M+ KG P++ + +II L +AE+ EM+ +G+L
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAF----------SVLGKILKKGYRPDAVTLTTL 89
D A I +LG P+I+ F + + F +L +L KG P+A T +L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+K C++ ++ A + D+ +RG + +Y L+KG C+ + + L ++++G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
+V Y+ +I K K +A +F +M + ++ D
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 202/317 (63%), Gaps = 4/317 (1%)
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQ 133
+++ G RPD VT TTL+ GLC +G V +AL D +V G + YGT+I GLC+MG
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 134 TRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
T ++L LL ++E +K +VV+YN IID LCKD A NLF+EM K + PDV+TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
++ FC G+ +A +LL +M + I PDV+TF+ L++AL KEG V EA+ + M+++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
+ P TYNS++DG+C + +N A +L+SMA + +P+V ++S +I+G CK K VD +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
+F EM I+ +T+TY++LI G C+ G + A +L++ M + G + T+ S+L L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 374 CKSHHVDKAIALTKKMR 390
C + KA A+ + ++
Sbjct: 297 CSKKELRKAFAILEDLQ 313
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 169/311 (54%), Gaps = 4/311 (1%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+P+VV + T+++ LC + V A L MV + P Y +++ G C +G + A
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
LL +M +I V+ +N ++D L K+G+ A+N+ M +G+ PD+ TY+ ++D +C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
A +L M +R + P+V ++S +I+ L K V EA ++ +M I P TI
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+S+IDG CK R++ A ++D M +K D T+++L++ CK+ VD + + +M
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+GI + VTY L+ G C+ G L AQ++ ++ G T+ M+ LC +
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 450 DEALALLSEME 460
+A A+L +++
Sbjct: 303 RKAFAILEDLQ 313
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 171/316 (54%), Gaps = 4/316 (1%)
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
MV PDVVT+ +L+ G C G++ +A L+D M + P + T+++ L K G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
+ A N+L+ M + +K + YN+++D C A + M +G+ P+V +YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I C++ +A L +M +I PD +T+S+LI+ L K G++S A E+ +M +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
TYNS++D CK ++ A + M + PDVVT++ L++G CK R+ N
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
E+F ++ +G TY +I+G C+ G D A LL+ M G P+ ITF++++ +L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 479 FEKGDNYKAEKLLREM 494
K + KA +L ++
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 157/286 (54%), Gaps = 4/286 (1%)
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
M PDV+TF TL++ L EG V +A ++ M+++G +P Y ++++G C + +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
A+ +L+ M + + +V Y+ II LCK+ A NLF EM I PD ITYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
+ID C+SGR + A +L+ +M + D T+++L++ L K V +A + M +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
I P +TYN ++DG CK+ RL +A+ + + K V T++ +ING CK D +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ EM +G + + +T+ T+I + GD A+ LL M++ G+
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 118/225 (52%), Gaps = 5/225 (2%)
Query: 28 HSHSLSPSIHNADDAISIFNRLLGTSP-TPSIIEFGQIPSAFSVLGKILKKGYRPDAVTL 86
H+ +L +H+ IF ++ S S G+ A +L ++++ PD VT
Sbjct: 94 HAQNLFTEMHDK----GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTF 149
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
+ LI L +G+V A + + D++ RG ++Y ++I G C+ + + ++L +
Sbjct: 150 SALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS 209
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
P+VV ++T+I+ CK K V + +F EM + + + VTY +L++GFC VG L
Sbjct: 210 KSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 269
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
A +LL+ M + P+ ITF +++ +L + +++A +L + K
Sbjct: 270 AQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 243/474 (51%), Gaps = 38/474 (8%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL--NQV 119
G +A + KILK G+ D+ T+L+ G C +R AL+ D V+++ N V
Sbjct: 209 GYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD-VMSKEVTCAPNSV 267
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
SY LI GLC +G+ + L Q+ +P+ Y +I +LC L+ AFNLF EM
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ + P+V TY L+ G C G+++EA + +M + I P VIT+N L++ K+G V
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
A +L VM K+ KP++ T+N LM+G C V + KA+ +L M G++P++ SY+++
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I GLC+ ++ A L + M C I PD +T++++I+ CK G+ A + M KG
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 360 PADKFT-----------------------------------YNSLLDVLCKSHHVDKAIA 384
D+ T N +LD+L K V + +A
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELA 567
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
+ K+ G+ P VVTY L+DGL + G + + + + + + G V Y I+INGLC
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 445 KEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
+ G +EA LLS M+D G P+ +T+ ++ G +A + +R M+ RG
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 232/449 (51%), Gaps = 37/449 (8%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ E G++ AF + ++ +KG +P T T LIK LC +G + +A D+++ RG + N
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
+Y LI GLCR G+ + + R++ + P+V+ YN +I+ CKD V AF L +
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLT 395
Query: 178 -----------------------------------EMVVKKVSPDVVTYNSLLYGFCIVG 202
M+ +SPD+V+YN L+ G C G
Sbjct: 396 VMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
+ A +LL M +I PD +TF +++A K+G A L +M+++G+ D T
Sbjct: 456 HMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
+L+DG C V + A+ IL ++ + + HS ++I+ L K V E L + ++ +
Sbjct: 516 TLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL 575
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
++P +TY++L+DGL +SG I+ ++ +++ M G + + Y +++ LC+ V++A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
L M+D G+ P+ VTY +++ G G+L A E + +V +GY + R Y+ ++ G
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Query: 443 --LCKEGLFDEALALLSEMEDKGCIPDAI 469
L ++G+ + + +S++ + P+ I
Sbjct: 696 FVLSQKGIDNSEESTVSDIALRETDPECI 724
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 219/435 (50%), Gaps = 1/435 (0%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A+ ++ G+ + T++ LC G A F ++ GF L+ +L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 127 GLCRMGQTRASLQLLRQVEGHLV-KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
G CR R +L++ + + PN V Y+ +I LC+ + +AF L +M K
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
P TY L+ C G + +A L DEM + P+V T+ L+D L ++G ++EA V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M+K + P + TYN+L++GYC + A +L M +R PNV +++ ++ GLC+
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+A++L M + PD ++Y+ LIDGLC+ G ++ A++L+ M+ D T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
+ ++++ CK D A A M +GI D VT L+DG+CK G+ ++A + + LV
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY 485
T + N++++ L K E LA+L ++ G +P +T+ T++ L GD
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 486 KAEKLLREMMARGLL 500
+ ++L M G L
Sbjct: 599 GSFRILELMKLSGCL 613
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 220/425 (51%), Gaps = 3/425 (0%)
Query: 79 YRPDAVTLTTLIK--GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRA 136
YR + LIK C K ++ F + GFRLN Y +L+ L ++
Sbjct: 119 YRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFL 178
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
+ R++E ++ Y TI+++LCK+ A S+++ D SLL
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 197 GFCIVGQLKEATELLDEMTRK-NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
GFC L++A ++ D M+++ P+ ++++ L+ L + G ++EA + M ++G +
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P TY L+ C I+KA + + M RG PNVH+Y+++I GLC++ ++EA +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
+M +I P ITY++LI+G CK GR+ A+EL+ M + + T+N L++ LC+
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
KA+ L K+M D G+ PD+V+YN+L+DGLC+EG + A ++ + T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
+ +IN CK+G D A A L M KG D +T T+I + + G A +L ++
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 496 ARGLL 500
+L
Sbjct: 539 KMRIL 543
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 160/391 (40%), Gaps = 92/391 (23%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD-------------- 107
G+ A + LG +L+KG D VT TTLI G+C G+ R AL +
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549
Query: 108 ----DVVARGFRLNQ-----------------VSYGTLIKGLCRMGQTRASLQLLRQVEG 146
D++++G ++ + V+Y TL+ GL R G S ++L ++
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
PNV Y II+ LC+ V +A L S M VSP+ VTY ++ G+ G+L
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 207 ATELLDEMTRKN-------------------------------------IGPDVIT-FNT 228
A E + M + P+ I +
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELIS 729
Query: 229 LVDALG---------------KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
+V+ LG KEG E+ +++ ++++GV + + +M+ YC +
Sbjct: 730 VVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKK 788
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD---TIT 330
K + ++ + + G P+ S+ ++I GL K + A L E+ + + +T
Sbjct: 789 HTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLT 848
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
Y + ++G S +LVD++H + +P
Sbjct: 849 YVECLMEGDETGDCSEVIDLVDQLHCRERPT 879
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 23/232 (9%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ +FG++ A +L + G P+ VT T ++KG G++ RAL+ +V RG+ LN
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN 685
Query: 118 QVSYGTLIKG--LCRMG-----QTRASLQLLRQVEGHLVKPNVVMYNTI----------- 159
Y +L++G L + G ++ S LR+ + + + + +
Sbjct: 686 DRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFL 745
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
+ LCK+ ++ +L ++ + V + + ++ +C + + EL+ + +
Sbjct: 746 VTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGF 804
Query: 220 GPDVITFNTLVDALGKEGNVKEAKN-VLAVMMKQGV--KPDLFTY-NSLMDG 267
P +F ++ L KEG+ + A+ V+ ++ GV K + TY LM+G
Sbjct: 805 VPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEG 856
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 235/453 (51%), Gaps = 5/453 (1%)
Query: 42 AISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRR 101
+I N L+G S++ G + A+ V +I + G + TL ++ LC G++ +
Sbjct: 199 SIDACNALIG-----SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253
Query: 102 ALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIID 161
F V +G + V+Y TLI G + +L+ + G P V YNT+I+
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
LCK A +F+EM+ +SPD TY SLL C G + E ++ +M +++ P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D++ F++++ + GN+ +A + + G+ PD Y L+ GYC I+ A+ +
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
N M Q+G +V +Y+ I+HGLCK KM+ EA LF EM + PD+ T + LIDG CK
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G + +A EL +M K D TYN+LLD K +D A + M + I P ++Y
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
+IL++ LC +G L A V+ +++ K TV N MI G C+ G + + L +M
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+G +PD I++ T+I + + KA L+++M
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 239/471 (50%), Gaps = 5/471 (1%)
Query: 30 HSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
+SL + N S+F+ L+ T ++ ++ A + KG+ L
Sbjct: 152 NSLDSTFSNCGSNDSVFDLLIRT-----YVQARKLREAHEAFTLLRSKGFTVSIDACNAL 206
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I L G V A + ++ G +N + ++ LC+ G+ L QV+ V
Sbjct: 207 IGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV 266
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
P++V YNT+I + L+ +AF L + M K SP V TYN+++ G C G+ + A E
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
+ EM R + PD T+ +L+ K+G+V E + V + M + V PDL ++S+M +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
++KA+ NS+ + G+ P+ Y+I+I G C+ M+ A+NL EM D +
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY++++ GLCK + A +L +EM + D +T L+D CK ++ A+ L +KM
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+++ I+ DVVTYN L+DG K G + A+E++ D+V K T +Y+I++N LC +G
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
EA + EM K P + ++I G+ E L +M++ G +
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 229/440 (52%), Gaps = 12/440 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTL 89
++A + N + G +P + + G+ A V ++L+ G PD+ T +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ C KG+V + D+ +R + V + +++ R G +L V+ +
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
P+ V+Y +I C+ ++S A NL +EM+ + + DVVTYN++L+G C L EA +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L +EMT + + PD T L+D K GN++ A + M ++ ++ D+ TYN+L+DG+
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
V +I+ A I M + + P SYSI+++ LC + EA ++ EM I P +
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+S+I G C+SG S +++M ++G D +YN+L+ + ++ KA L KKM
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 390 RDQ--GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
++ G+ PDV TYN ++ G C++ ++K A+ V + ++ +G + TY MING +
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Query: 448 LFDEALALLSEMEDKGCIPD 467
EA + EM +G PD
Sbjct: 707 NLTEAFRIHDEMLQRGFSPD 726
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 262/533 (49%), Gaps = 44/533 (8%)
Query: 3 LSSPRVSMSSFLRLNNFPVVS-KPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF 61
+ + R +SS LR ++ P S K F + SLS D + + + LL S
Sbjct: 71 IETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESK------- 123
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
I A + + +G P + +LT L+ L + R + +++ FR ++ Y
Sbjct: 124 -MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
G I+ ++ L+L +++ + P+V +YN +ID LCK K ++DA LF EM+
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+++ P ++TYN+L+ G+C G +++ ++ + M +I P +ITFNTL+ L K G V++
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A+NVL M G PD FT++ L DGY + A+ + + GV N ++ SI+++
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
LCK +++A + ++P+ + Y+++IDG C+ G + A ++ M +G
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 362 DKFTYNSLLDVLC-----------------------------------KSHHVDKAIALT 386
D YN L+ C + + DK +
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
K+M D G P+VV+Y L++ LCK +L AQ V +D+ +G VR YN++I+G C +
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G ++A EM KG + +T+ T+I L G +AE LL E+ +GL
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 243/498 (48%), Gaps = 46/498 (9%)
Query: 42 AISIFNRLLGTSPTPSIIEFGQIPSA---FSVLGKILKKGYR-------PDAVTLTTLIK 91
I++F +L + PS +G+ A S +GK L+ R P LI
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GLC + A Q D+++AR + ++Y TLI G C+ G S ++ +++ ++P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF------------- 198
+++ +NT++ L K +V DA N+ EM PD T++ L G+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 199 ----------------------CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
C G++++A E+L K + P+ + +NT++D ++
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
G++ A+ + M KQG+KPD YN L+ +C + E+ A +N M +GV+P+V +Y
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+I+I G + D+ ++ EME +P+ ++Y +LI+ LCK ++ A + +M +
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
+G YN L+D C ++ A +K+M +GI+ ++VTYN L+DGL G+L
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 417 AQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIIC 476
A+++ ++ KG V TYN +I+G G +AL EM+ G P T+ +I
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 477 ALFEKGDNYKAEKLLREM 494
++G E+L EM
Sbjct: 643 LCTKEGIEL-TERLFGEM 659
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 242/505 (47%), Gaps = 43/505 (8%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLT 87
N + + + R+ PS+I F G + A +VL ++ G+ PDA T +
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL-RQVEG 146
L G + AL ++ V G ++N + L+ LC+ G+ + ++L R++
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
LV PN V+YNT+ID C+ + A M + + PD + YN L+ FC +G+++
Sbjct: 384 GLV-PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A + +++M K + P V T+N L+ G++ + ++L M G P++ +Y +L++
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
C +++ +A + M RGV+P V Y+++I G C +++A EM I
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
+ +TY++LIDGL +G++S A +L+ E+ KG D FTYNSL+ + +V + IAL
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 387 KKMRDQGIQP-------------------------------DVVTYNILMDGLCKEGRLK 415
++M+ GI+P D++ YN ++ G ++
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A + + ++ K + TYN +I G K G E +L+ EM + P+A T+ I+
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 476 CALFEKGDNYKAEKLLREMMARGLL 500
E D A REM +G L
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFL 767
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 194/379 (51%)
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
L+ L + Q R ++ + + +P+ MY I + K V LF+ M +
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
+ P V YN L+ G C ++ +A +L DEM + + P +IT+NTL+D K GN +++
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
V M ++P L T+N+L+ G + A +L M G P+ ++SI+ G
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
N+ + AL ++ + + T S L++ LCK G+I A E++ KG ++
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
YN+++D C+ + A + M QG++PD + YN L+ C+ G ++NA++
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
+ +KG +V TYNI+I G ++ FD+ +L EMED G +P+ +++ T+I L +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 484 NYKAEKLLREMMARGLLEK 502
+A+ + R+M RG+ K
Sbjct: 510 LLEAQIVKRDMEDRGVSPK 528
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 217/465 (46%), Gaps = 31/465 (6%)
Query: 66 SAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLI 125
+A V + G + +A T + L+ LC +G++ +A + +A+G N+V Y T+I
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 126 KGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
G CR G + + +E +KP+ + YN +I C+ + +A ++M +K VS
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
P V TYN L+ G+ + + ++L EM P+V+++ TL++ L K + EA+ V
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M +GV P + YN L+DG C +I A M ++G+ N+ +Y+ +I GL
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG-QPA--- 361
+ EA +L E+ + PD TY+SLI G +G + L +EM G +P
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 362 ---------------------------DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
D YN +L ++KA L K+M ++ I
Sbjct: 637 YHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
D TYN L+ G K G+L + + ++ + TYNI++ G C+ + A
Sbjct: 697 GLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYV 756
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EM++KG + D ++ L E+ + +AE ++ EM R L
Sbjct: 757 WYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 14/331 (4%)
Query: 37 HNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK----------KGYRPDAVTL 86
+ D I + P+++ +G + + K+L+ +G P
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
LI G C KG++ A +F +++ +G LN V+Y TLI GL G+ + LL ++
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
+KP+V YN++I V L+ EM + P + TY+ LL C ++
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIEL 651
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
L EM+ K PD++ +N ++ G++++A N+ M+++ + D TYNSL+
Sbjct: 652 TERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G V ++ + ++++ M R + P +Y+II+ G C+ K A + EM+ +
Sbjct: 709 GQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLL 768
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
D + L+ GL + R A ++ EM+ +
Sbjct: 769 DVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 133/262 (50%)
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
+ EA ++ + +G+ P + L+D + I + ++ + P+ Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
I K V + L LF M+ +I P Y+ LIDGLCK R++ A +L DEM +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
TYN+L+D CK+ + +K+ + ++M+ I+P ++T+N L+ GL K G +++A+
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
V +++ G+ T++I+ +G + AL + D G +A T ++ AL
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 479 FEKGDNYKAEKLLREMMARGLL 500
++G KAE++L MA+GL+
Sbjct: 365 CKEGKIEKAEEILGREMAKGLV 386
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/463 (30%), Positives = 241/463 (52%), Gaps = 27/463 (5%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ +A + ++ +KG +P+ T L++G C G + L+ + + + G N+V Y T
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
++ CR G+ S +++ ++ + P++V +N+ I +LCK+ V DA +FS+M + +
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 184 V----SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
P+ +TYN +L GFC VG L++A L + + + + ++N + L + G
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
EA+ VL M +G+ P +++YN LMDG C + ++ A I+ M + GV P+ +Y +
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
+HG C VD A +L EM +P+ T + L+ L K GRIS A EL+ +M+ KG
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ-----------------------P 396
D T N ++D LC S +DKAI + K MR G P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
D++TY+ L++GLCK GR A+ +F +++ + YNI I+ CK+G A +L
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 457 SEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ME KGC T+ ++I L K ++ L+ EM +G+
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 236/497 (47%), Gaps = 38/497 (7%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGY--------------RPDAVT 85
DD+ + ++ P I+ F SA GK+L RP+++T
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
++KG C G + A + + + SY ++GL R G+ + +L+Q+
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
+ P++ YN ++D LCK ++SDA + M V PD VTY LL+G+C VG++
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
A LL EM R N P+ T N L+ +L K G + EA+ +L M ++G D T N ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 266 DGYCLVNEINKAIAILNSMAQRGVT-----------------------PNVHSYSIIIHG 302
DG C E++KAI I+ M G P++ +YS +++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
LCK EA NLFAEM K+ PD++ Y+ I CK G+IS A+ ++ +M KG
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
TYNSL+ L + + + L +M+++GI P++ TYN + LC+ ++++A +
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
+++ K V ++ +I CK FD A + E C + + L G
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAG 712
Query: 483 DNYKAEKLLREMMARGL 499
KA +LL ++ RG
Sbjct: 713 QLLKATELLEAVLDRGF 729
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 185/353 (52%), Gaps = 4/353 (1%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
KP+V +YN +++S K++ V L+ +MV+ ++P T+N L+ C + A E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L DEM K P+ TF LV K G + +L M GV P+ YN+++ +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII---- 325
+ + ++ M + G+ P++ +++ I LCK V +A +F++ME + +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
P++ITY+ ++ G CK G + A L + + A +YN L L + +A +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
K+M D+GI P + +YNILMDGLCK G L +A+ + + G TY +++G C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
G D A +LL EM C+P+A T ++ +L++ G +AE+LLR+M +G
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 200/393 (50%), Gaps = 23/393 (5%)
Query: 35 SIHNADDAISIFNRLLGTSPTP----------SIIEFGQIPSAFSVLGKILKKGYRPDAV 84
S+ D A S+ ++ + P S+ + G+I A +L K+ +KGY D V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T ++ GLC GE+ +A++ + +G R++ + L +G + L +
Sbjct: 468 TCNIIVDGLCGSGELDKAIE-----IVKGMRVHGSA------ALGNLGNSYIGLVDDSLI 516
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
E + + P+++ Y+T+++ LCK ++A NLF+EM+ +K+ PD V YN ++ FC G++
Sbjct: 517 ENNCL-PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKI 575
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
A +L +M +K + T+N+L+ LG + + E ++ M ++G+ P++ TYN+
Sbjct: 576 SSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTA 635
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+ C ++ A +L+ M Q+ + PNV S+ +I CK D A +F I
Sbjct: 636 IQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
+ + YS + + L +G++ A EL++ + ++G F Y L++ LCK ++ A
Sbjct: 696 QKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
+ KM D+G D ++DGL K G K A
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 199/426 (46%), Gaps = 26/426 (6%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ + G + A +++G + + G PDAVT L+ G C G+V A +++ N
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
+ L+ L +MG+ + +LLR++ + V N I+D LC + A +
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 178 EMVVKKVS-----------------------PDVVTYNSLLYGFCIVGQLKEATELLDEM 214
M V + PD++TY++LL G C G+ EA L EM
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
+ + PD + +N + K+G + A VL M K+G L TYNSL+ G + N+I
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+ +++ M ++G++PN+ +Y+ I LC+ + V++A NL EM I P+ ++ L
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 335 IDGLCKSGRISHAWELVDEMHNK-GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
I+ CK A E+ + + GQ Y+ + + L + + KA L + + D+G
Sbjct: 671 IEAFCKVPDFDMAQEVFETAVSICGQKEG--LYSLMFNELLAAGQLLKATELLEAVLDRG 728
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
+ Y L++ LCK+ L+ A + ++ +GY +I+GL K G EA
Sbjct: 729 FELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEAN 788
Query: 454 ALLSEM 459
+ +M
Sbjct: 789 SFADKM 794
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 173/350 (49%), Gaps = 8/350 (2%)
Query: 158 TIIDSLCKDKLVSDAFNLFSEMVVKKV---SPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+++ K + AF F ++V + P V YN LL +++ + L +M
Sbjct: 80 SVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
I P TFN L+ AL V A+ + M ++G KP+ FT+ L+ GYC
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+K + +LN+M GV PN Y+ I+ C+ D++ + +M ++PD +T++S
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 335 IDGLCKSGRISHAWELVDEMHNK---GQP-ADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
I LCK G++ A + +M G P + TYN +L CK ++ A L + +R
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+ + +YNI + GL + G+ A+ V + + KG ++ +YNI+++GLCK G+
Sbjct: 319 ENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS 378
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+A ++ M+ G PDA+T+ ++ G A+ LL+EMM L
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 236/470 (50%), Gaps = 37/470 (7%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
AF VL +LK+G+ + L+KGLC E +A+ ++ + SY T+I+
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
G C + +L+L +++G ++V + +ID+ CK + +A EM +
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D+V Y SL+ GFC G+L L DE+ + P IT+NTL+ K G +KEA +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M+++GV+P+++TY L+DG C V + +A+ +LN M ++ PN +Y+III+ LCK+
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 307 KMVDEALNLFAEM--------------------------ECIKII-----------PDTI 329
+V +A+ + M E K++ PD I
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+Y++LI GLCK R+ A ++ D + K D+ T N LL+ K+ V+KA+ L K++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
D I + TY ++DG CK G L A+ + + + +V YN +++ LCKEG
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D+A L EM+ PD ++F +I + GD AE LL M GL
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 261/473 (55%), Gaps = 12/473 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI------LKK----GYRPDAVTLTTL 89
+ A+ + N + G+ + S++ +G + AF GK+ LK+ G D V T+L
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I+G C GE+ R D+V+ RG ++Y TLI+G C++GQ + + ++ + V
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+PNV Y +ID LC +A L + M+ K P+ VTYN ++ C G + +A E
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG--VKPDLFTYNSLMDG 267
+++ M ++ PD IT+N L+ L +G++ EA +L +M+K PD+ +YN+L+ G
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
C N +++A+ I + + ++ + + +I+++ K V++A+ L+ ++ KI+ +
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
+ TY+++IDG CK+G ++ A L+ +M F YN LL LCK +D+A L +
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
+M+ PDVV++NI++DG K G +K+A+ + + G + TY+ +IN K G
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
DEA++ +M D G PDA ++++ +G+ K +L+++++ + ++
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 219/418 (52%), Gaps = 2/418 (0%)
Query: 52 TSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA 111
TS + G++ ++ ++L++G P A+T TLI+G C G+++ A + + ++
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
RG R N +Y LI GLC +G+T+ +LQLL + +PN V YN II+ LCKD LV+D
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKN--IGPDVITFNTL 229
A + M ++ PD +TYN LL G C G L EA++LL M + + PDVI++N L
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+ L KE + +A ++ +++++ D T N L++ ++NKA+ + ++ +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
N +Y+ +I G CK M++ A L +M ++ P Y+ L+ LCK G + AW
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 350 LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
L +EM D ++N ++D K+ + A +L M G+ PD+ TY+ L++
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 410 KEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
K G L A F +V G+ + ++ +G D+ L+ ++ DK + D
Sbjct: 611 KLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 180/339 (53%)
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
N ++ L + + AF+ + +M+ + V+ + LL + + + A +L M +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
+ +V N L+ L + +A ++L M + + PD+F+YN+++ G+C E+ K
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
A+ + N M G + ++ ++ I+I CK +DEA+ EM+ + + D + Y+SLI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
G C G + L DE+ +G TYN+L+ CK + +A + + M ++G++P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
+V TY L+DGLC G+ K A ++ ++ K TYNI+IN LCK+GL +A+ ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 457 SEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
M+ + PD IT+ ++ L KGD +A KLL M+
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 189/367 (51%), Gaps = 16/367 (4%)
Query: 130 RMGQTRASLQLLRQVEGHLVKP--NVVMYNTIID----------SLCKDK--LVSDAFNL 175
R + A+ ++LR+ E H+V+ N +Y+ +++ SLC+D + +A ++
Sbjct: 2 RFWTSAAAAEILRRDE-HVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSV 60
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F + V S N+L+ + A +M + + ++ + L++ +
Sbjct: 61 FQQ-AVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQ 119
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
A VLA+M+K+G +++ +N L+ G C E KA+++L M + + P+V S
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y+ +I G C+ K +++AL L EM+ +T+ LID CK+G++ A + EM
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
G AD Y SL+ C +D+ AL ++ ++G P +TYN L+ G CK G+LK
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A E+F+ ++ +G V TY +I+GLC G EAL LL+ M +K P+A+T+ II
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 476 CALFEKG 482
L + G
Sbjct: 360 NKLCKDG 366
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 134/261 (51%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
PD ++ LI GLC + + +AL +D +V + ++V+ L+ + G +++L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
+Q+ + N Y +ID CK +++ A L +M V ++ P V YN LL C
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
G L +A L +EM R N PDV++FN ++D K G++K A+++L M + G+ PDLFT
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
Y+ L++ + + +++AI+ + M G P+ H ++ D+ L ++
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Query: 321 CIKIIPDTITYSSLIDGLCKS 341
I+ D +++D +C S
Sbjct: 662 DKDIVLDKELTCTVMDYMCNS 682
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 35/273 (12%)
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
N L+ L + N + A + M++ + + + L++ Y + + A +L M +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
RG NV++++I++ GLC+N +EC K +
Sbjct: 136 RGFAFNVYNHNILLKGLCRN------------LECGKAVS-------------------- 163
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
L+ EM D F+YN+++ C+ ++KA+ L +M+ G +VT+ IL+D
Sbjct: 164 ---LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
CK G++ A +++ G + Y +I G C G D AL E+ ++G P
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 467 DAITFETIICALFEKGDNYKAEKLLREMMARGL 499
AIT+ T+I + G +A ++ M+ RG+
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 248/506 (49%), Gaps = 47/506 (9%)
Query: 30 HSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
+ +PS++ N +LG S+++ G+ S +S L ++LK+ PD T L
Sbjct: 192 YGFNPSVYTC-------NAILG-----SVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 239
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I LC +G ++ + G+ V+Y T++ C+ G+ +A+++LL ++ V
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+V YN +I LC+ ++ + L +M + + P+ VTYN+L+ GF G++ A++
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
LL+EM + P+ +TFN L+D EGN KEA + +M +G+ P +Y L+DG C
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
E + A M + GV +Y+ +I GLCKN +DEA+ L EM I PD +
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHN--------------------------------- 356
TYS+LI+G CK GR A E+V ++
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 357 --KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+G D FT+N L+ LCK+ V +A + M GI P+ V+++ L++G G
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
A VF ++ G+H T TY ++ GLCK G EA L + D + + T+
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 475 ICALFEKGDNYKAEKLLREMMARGLL 500
+ A+ + G+ KA L EM+ R +L
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSIL 685
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 217/437 (49%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G I + + + G+ P T ++ + GE F +++ R + ++
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 236
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI LC G S L++++E P +V YNT++ CK A L M
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
K V DV TYN L++ C ++ + LL +M ++ I P+ +T+NTL++ EG V
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A +L M+ G+ P+ T+N+L+DG+ +A+ + M +G+TP+ SY +++
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
GLCKN D A + M+ + ITY+ +IDGLCK+G + A L++EM G
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D TY++L++ CK A + ++ G+ P+ + Y+ L+ C+ G LK A ++
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+ ++++G+ T+N+++ LCK G EA + M G +P+ ++F+ +I
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 482 GDNYKAEKLLREMMARG 498
G+ KA + EM G
Sbjct: 597 GEGLKAFSVFDEMTKVG 613
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 211/437 (48%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+ +A +L + KG D T LI LC + + D+ R N+V+Y
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
TLI G G+ + QLL ++ + PN V +N +ID + +A +F M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
K ++P V+Y LL G C + A M R + IT+ ++D L K G + E
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A +L M K G+ PD+ TY++L++G+C V A I+ + + G++PN YS +I+
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
C+ + EA+ ++ M D T++ L+ LCK+G+++ A E + M + G
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
+ +++ L++ S KA ++ +M G P TY L+ GLCK G L+ A++
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+ L V YN ++ +CK G +A++L EM + +PD+ T+ ++I L K
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 482 GDNYKAEKLLREMMARG 498
G A +E ARG
Sbjct: 702 GKTVIAILFAKEAEARG 718
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 211/412 (51%)
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
LI+ +G ++ +L+ + GF + + ++ + + G+ + L+++
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
+ P+V +N +I+ LC + + L +M +P +VTYN++L+ +C G+ K A
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
ELLD M K + DV T+N L+ L + + + +L M K+ + P+ TYN+L++G+
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
++ A +LN M G++PN +++ +I G EAL +F ME + P
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
++Y L+DGLCK+ A M G + TY ++D LCK+ +D+A+ L +
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
M GI PD+VTY+ L++G CK GR K A+E+ + G Y+ +I C+ G
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
EA+ + M +G D TF ++ +L + G +AE+ +R M + G+L
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 226/475 (47%), Gaps = 36/475 (7%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ A +L ++L G P+ VT LI G +G + AL+ + A+G ++VSY
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
G L+ GLC+ + + +++ + V + Y +ID LCK+ + +A L +EM
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP-------------------- 221
+ PD+VTY++L+ GFC VG+ K A E++ + R + P
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 222 ---------------DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
D TFN LV +L K G V EA+ + M G+ P+ +++ L++
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
GY E KA ++ + M + G P +Y ++ GLCK + EA + +
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 651
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
DT+ Y++L+ +CKSG ++ A L EM + D +TY SL+ LC+ AI
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 387 KKMRDQG-IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
K+ +G + P+ V Y +DG+ K G+ K + + G+ + T N MI+G +
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
G ++ LL EM ++ P+ T+ ++ ++ D + L R ++ G+L
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 187/352 (53%)
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
L N +Y+ +I ++ ++ D+ +F M + +P V T N++L G+
Sbjct: 158 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
L EM ++ I PDV TFN L++ L EG+ +++ ++ M K G P + TYN+++
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
YC AI +L+ M +GV +V +Y+++IH LC++ + + L +M I P+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
+TY++LI+G G++ A +L++EM + G + T+N+L+D + +A+ +
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
M +G+ P V+Y +L+DGLCK A+ + + G V TY MI+GLCK G
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
DEA+ LL+EM G PD +T+ +I + G A++++ + GL
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 187/382 (48%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
N Y LI+ R G + SL++ R + + P+V N I+ S+ K ++
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
EM+ +K+ PDV T+N L+ C G ++++ L+ +M + P ++T+NT++ K+
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
G K A +L M +GV D+ TYN L+ C N I K +L M +R + PN +Y
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+ +I+G V A L EM + P+ +T+++LIDG G A ++ M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
KG + +Y LLD LCK+ D A +M+ G+ +TY ++DGLCK G L
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 417 AQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIIC 476
A + ++ G + TY+ +ING CK G F A ++ + G P+ I + T+I
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 477 ALFEKGDNYKAEKLLREMMARG 498
G +A ++ M+ G
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEG 543
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 232/470 (49%), Gaps = 9/470 (1%)
Query: 35 SIHNADDAIS--IFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKG 92
S+H A+ ++N LL ++ + G + A S+ G+++++ PD+ T T+LI G
Sbjct: 643 SLHAVPAAVDTVMYNTLL-----TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 93 LCLKGEVRRALQFHDDVVARGFRL-NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
LC KG+ A+ F + ARG L N+V Y + G+ + GQ +A + Q++ P
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
++V N +ID + + +L EM + P++ TYN LL+G+ + + L
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+ I PD +T ++LV + + ++ +L + +GV+ D +T+N L+ C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
EIN A ++ M G++ + + ++ L +N E+ + EM I P++ Y
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
LI+GLC+ G I A+ + +EM ++++ L K D+A L + M
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 997
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+ P + ++ LM CK G + A E+ + G + + +YN++I GLC +G
Sbjct: 998 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1057
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYK-AEKLLREMMARGLL 500
A L EM+ G + +A T++ +I L + + A+ +L++++ARG +
Sbjct: 1058 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/472 (30%), Positives = 246/472 (52%), Gaps = 12/472 (2%)
Query: 40 DDAISIFNRLLGTS------PTPSII----EFGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
D A+S ++ T P S+I +FG I +A + +++ K P VT T+L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ G C KG++ +AL+ + ++ +G + ++ TL+ GL R G R +++L ++ V
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
KPN V YN +I+ C++ +S AF EM K + PD +Y L++G C+ GQ EA
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
+D + + N + I + L+ +EG ++EA +V M+++GV DL Y L+DG
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ +L M RG+ P+ Y+ +I K EA ++ M +P+ +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH-HVDKAIALTKK 388
TY+++I+GLCK+G ++ A L +M ++ TY LD+L K + KA+ L
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
+ +G+ + TYN+L+ G C++GR++ A E+ ++ G TY MIN LC+
Sbjct: 779 IL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+A+ L + M +KG PD + + T+I G+ KA +L EM+ +GL+
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 237/436 (54%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ A + + K +PD VT TL+ GLC E L+ D+++ F ++ +
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
+L++GL + G+ +L L+++V V PN+ +YN +IDSLCK + +A LF M
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ P+ VTY+ L+ FC G+L A L EM + V +N+L++ K G++ A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ +A M+ + ++P + TY SLM GYC +INKA+ + + M +G+ P++++++ ++ G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
L + ++ +A+ LF EM + P+ +TY+ +I+G C+ G +S A+E + EM KG D
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
++Y L+ LC + +A + + + + Y L+ G C+EG+L+ A V Q
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
++V +G + + Y ++I+G K LL EM D+G PD + + ++I A + G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 483 DNYKAEKLLREMMARG 498
D +A + M+ G
Sbjct: 697 DFKEAFGIWDLMINEG 712
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 220/415 (53%)
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQ 133
I K P+ TL+ L+ GL A++ +D+V+ G R + Y +I+ LC +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 134 TRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
+ +++ +E N+V YN +ID LCK + V +A + ++ K + PDVVTY +
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
L+YG C V + + E++DEM P ++LV+ L K G ++EA N++ ++ G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
V P+LF YN+L+D C + ++A + + M + G+ PN +YSI+I C+ +D AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
+ EM + Y+SLI+G CK G IS A + EM NK TY SL+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
C ++KA+ L +M +GI P + T+ L+ GL + G +++A ++F ++
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE 488
TYN+MI G C+EG +A L EM +KG +PD ++ +I L G +A+
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 211/410 (51%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+I A +++ +++ G P+ LI LC + A D + G R N V+Y
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI CR G+ +L L ++ +K +V YN++I+ CK +S A +EM+
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
KK+ P VVTY SL+ G+C G++ +A L EMT K I P + TF TL+ L + G +++
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A + M + VKP+ TYN +++GYC +++KA L M ++G+ P+ +SY +IH
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
GLC EA + + I Y+ L+ G C+ G++ A + EM +G
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D Y L+D K L K+M D+G++PD V Y ++D K G K A ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
++ +G TY +INGLCK G +EA L S+M+ +P+ +T+
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 238/469 (50%), Gaps = 12/469 (2%)
Query: 42 AISIFNRLLGTSPTP----------SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+ +FN ++ P S+ E + A ++ + G + V LI
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
GLC K +V A+ D+ + + + V+Y TL+ GLC++ + L+++ ++ P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+ +++++ L K + +A NL +V VSP++ YN+L+ C + EA L
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
D M + + P+ +T++ L+D + G + A + L M+ G+K ++ YNSL++G+C
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+I+ A + M + + P V +Y+ ++ G C +++AL L+ EM I P T+
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++L+ GL ++G I A +L +EM ++ TYN +++ C+ + KA K+M +
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG-YHVTVRTYNIMINGLCKEGLFD 450
+GI PD +Y L+ GLC G+ A+ VF D + KG + Y +++G C+EG +
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EAL++ EM +G D + + +I + D LL+EM RGL
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 186/346 (53%), Gaps = 3/346 (0%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVS--PDVVTYNSLLYGFCIVGQLKEATELLDE 213
++ +I + + V D +F +M++ KVS P+V T ++LL+G A EL ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVF-KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
M I PDV + ++ +L + ++ AK ++A M G ++ YN L+DG C +
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+ +A+ I +A + + P+V +Y +++GLCK + + L + EM C++ P SS
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
L++GL K G+I A LV + + G + F YN+L+D LCK +A L +M G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
++P+ VTY+IL+D C+ G+L A ++V G ++V YN +ING CK G A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
++EM +K P +T+ +++ KG KA +L EM +G+
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 173/344 (50%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P V + ++ L K + A LF++MV + PDV Y ++ C + L A E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+ M +++ +N L+D L K+ V EA + + + +KPD+ TY +L+ G C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
V E + +++ M +P+ + S ++ GL K ++EALNL + + P+
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y++LID LCK + A L D M G + TY+ L+D+ C+ +D A++ +M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
D G++ V YN L++G CK G + A+ +++ K TV TY ++ G C +G +
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+AL L EM KG P TF T++ LF G A KL EM
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 80/370 (21%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
DA+ +FN + + P+ + + G + AF L ++ +KG PD + LI
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQ----------- 139
GLCL G+ A F D + LN++ Y L+ G CR G+ +L
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 140 ------------------------LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
LL+++ +KP+ V+Y ++ID+ K +AF +
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL-------------------LDEMTR 216
+ M+ + P+ VTY +++ G C G + EA L LD +T+
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 217 ----------------KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
K + + T+N L+ ++G ++EA ++ M+ GV PD T
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
Y ++++ C N++ KAI + NSM ++G+ P+ +Y+ +IHG C + +A L EM
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Query: 321 CIKIIPDTIT 330
+IP+ T
Sbjct: 885 RQGLIPNNKT 894
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 37/203 (18%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLC--------------------------- 94
G AF + ++ +G P+ VT T +I GLC
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 95 -------LKGEV--RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
KGEV ++A++ H+ ++ +G N +Y LI+G CR G+ + +L+ ++
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
G V P+ + Y T+I+ LC+ V A L++ M K + PD V YN+L++G C+ G++
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 206 EATELLDEMTRKNIGPDVITFNT 228
+ATEL +EM R+ + P+ T T
Sbjct: 875 KATELRNEMLRQGLIPNNKTSRT 897
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/555 (29%), Positives = 260/555 (46%), Gaps = 90/555 (16%)
Query: 31 SLSPSIHNADD--AISIFNRLLGTSPTPSI-------IEFGQIPSAFS------VLGKIL 75
+LS +H A+ IF +++ P++ I + PS+FS V ++
Sbjct: 137 ALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMV 196
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN--QVSYGTLIKGLCRMGQ 133
K G + T L+ G CL+G++ AL + +V+ F++N V+Y T++K + + G+
Sbjct: 197 KIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE-FKVNPDNVTYNTILKAMSKKGR 255
Query: 134 TRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
+LL ++ + + PN V YN ++ CK + +AF + M V PD+ TYN
Sbjct: 256 LSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNI 315
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
L+ G C G ++E EL+D M + PDV+T+NTL+D + G EA+ ++ M G
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375
Query: 254 VK------------------------------------PDLFTYNSLMDGYCLVNEINKA 277
VK PD+ TY++L+ Y V +++ A
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGA 435
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL---------------------- 315
+ ++ M Q+G+ N + + I+ LCK + +DEA NL
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 316 -------------FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
+ EM+ +KI P T++SLI GLC G+ A E DE+ G D
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
T+NS++ CK V+KA + +PD T NIL++GLCKEG + A F
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
L I+ V TYN MI+ CK+ EA LLSEME+KG PD T+ + I L E G
Sbjct: 616 TL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674
Query: 483 DNYKAEKLLREMMAR 497
+ ++LL++ +
Sbjct: 675 KLSETDELLKKFSGK 689
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 214/412 (51%), Gaps = 46/412 (11%)
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK---DKLVSDAFNLFSEMVVKKVSPDV 188
G+ +LQ+ +++ +KPN++ NT++ L + +S A +F +MV VS +V
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRK-NIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
T+N L+ G+C+ G+L++A +L+ M + + PD +T+NT++ A+ K+G + + K +L
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 248 VMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNK 307
M K G+ P+ TYN+L+ GYC + + +A I+ M Q V P++ +Y+I+I+GLC
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 308 MVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYN 367
+ E L L M+ +K+ PD +TY++LIDG + G A +L+++M N G A++ T+N
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 368 SLLDVLCKSHHVDKAIALTKKMRD----QGIQPDVVTY---------------------- 401
L LCK +K A+T+K+++ G PD+VTY
Sbjct: 385 ISLKWLCKE---EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 402 -------------NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
N ++D LCKE +L A + +G+ V TY +I G +E
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
++AL + EM+ P TF ++I L G A + E+ GLL
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 198/382 (51%), Gaps = 27/382 (7%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRAL--QFHDDVVARGFRL 116
E G A ++ ++ G + + VT +K LC K E R A+ + + V GF
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC-KEEKREAVTRKVKELVDMHGFSP 414
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ V+Y TLIK ++G +L+++R++ +K N + NTI+D+LCK++ + +A NL
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
+ + D VTY +L+ GF ++++A E+ DEM + I P V TFN+L+ L
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
G + A + + G+ PD T+NS++ GYC + KA N + P+ ++
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+I+++GLCK M ++ALN F + + + DT+TY+++I CK ++ A++L+ EM
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM--------RD---------------QG 393
KG D+FTYNS + +L + + + L KK RD +
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEE 713
Query: 394 IQPDVVTYNILMDGLCKEGRLK 415
+ + + Y+ ++D LC GRLK
Sbjct: 714 LNTEAIAYSDVIDELCSRGRLK 735
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 154/319 (48%), Gaps = 40/319 (12%)
Query: 221 PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG---YCLVNEINKA 277
P F+ + A EG A + M++ +KP+L T N+L+ G Y I+ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC-IKIIPDTITYSSLID 336
+ + M + GV+ NV +++++++G C +++AL + M K+ PD +TY++++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
+ K GR+S EL+ +M G ++ TYN+L+ CK + +A + + M+ + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
D+ TYNIL++GLC G ++ E+ + V TYN +I+G + GL EA L+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 457 SEMEDKGC------------------------------------IPDAITFETIICALFE 480
+ME+ G PD +T+ T+I A +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 481 KGDNYKAEKLLREMMARGL 499
GD A +++REM +G+
Sbjct: 429 VGDLSGALEMMREMGQKGI 447
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 251/495 (50%), Gaps = 45/495 (9%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTL 89
D+A +++ P++I + +I A+ VL ++ KKG+ P+ + L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I G + +A++ D +V++G L +Y TLIKG C+ GQ + +LL+++
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP----------------------- 186
N + ++I LC + A EM+++ +SP
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 187 ------------DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
D T N+LL+G C G+L EA + E+ + D +++NTL+
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
+ + EA L M+K+G+KPD +TY+ L+ G +N++ +AI + + G+ P+V+
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+YS++I G CK + +E F EM + P+T+ Y+ LI C+SGR+S A EL ++M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+KG + TY SL+ + V++A L ++MR +G++P+V Y L+DG K G++
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ + +++ K H TY +MI G ++G EA LL+EM +KG +PD+IT++
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 475 ICALFEKGDNYKAEK 489
I ++G +A K
Sbjct: 792 IYGYLKQGGVLEAFK 806
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 237/521 (45%), Gaps = 70/521 (13%)
Query: 50 LGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDV 109
L T+ + + G++ A + K+ + G P+ VT T+I GL + G A F + +
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 110 VARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLV 169
V RG ++Y L+KGL R + + +L+++ PNV++YN +IDS + +
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 170 SDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR------------- 216
+ A + MV K +S TYN+L+ G+C GQ A LL EM
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 217 ----------------------KNIGPDVITFNTLVDALGKEG----------------- 237
+N+ P TL+ L K G
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 238 ------------------NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
+ EA + ++ +G D +YN+L+ G C ++++A
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
L+ M +RG+ P+ ++YSI+I GL V+EA+ + + + ++PD TYS +IDG C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
K+ R E DEM +K + YN L+ C+S + A+ L + M+ +GI P+
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
TY L+ G+ R++ A+ +F+++ ++G V Y +I+G K G + LL EM
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
K P+ IT+ +I G+ +A +LL EM +G++
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 218/433 (50%), Gaps = 1/433 (0%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A V + KG P T L+ L E ++ + D VV +G + + T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
C+ G+ +++L ++E V PNVV +NT+ID L +AF +MV + + P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
++TY+ L+ G ++ +A +L EMT+K P+VI +N L+D+ + G++ +A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
+M+ +G+ TYN+L+ GYC + + A +L M G N S++ +I LC +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
M D AL EM + P ++LI GLCK G+ S A EL + NKG D T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
N+LL LC++ +D+A + K++ +G D V+YN L+ G C + +L A ++V
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYK 486
+G TY+I+I GL +EA+ + + G +PD T+ +I + +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 487 AEKLLREMMARGL 499
++ EMM++ +
Sbjct: 629 GQEFFDEMMSKNV 641
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 160/296 (54%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ E G++ AF + +IL +G D V+ TLI G C K ++ A F D++V RG + +
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
+Y LI GL M + ++Q + + + P+V Y+ +ID CK + + F
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM+ K V P+ V YN L+ +C G+L A EL ++M K I P+ T+ +L+ +
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
V+EAK + M +G++P++F Y +L+DGY + ++ K +L M + V PN +Y+
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
++I G ++ V EA L EM I+PD+ITY I G K G + A++ DE
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 153/294 (52%), Gaps = 1/294 (0%)
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A ++ + K + P T N L+ +L + ++ V+ K GV PD++ + + ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
+C ++ +A+ + + M + GV PNV +++ +I GL DEA +M + P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
ITYS L+ GL ++ RI A+ ++ EM KG P + YN+L+D ++ ++KAI +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
M +G+ TYN L+ G CK G+ NA+ + ++++ G++V ++ +I LC
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+FD AL + EM + P T+I L + G + KA +L + + +G +
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 251/495 (50%), Gaps = 45/495 (9%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTL 89
D+A +++ P++I + +I A+ VL ++ KKG+ P+ + L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I G + +A++ D +V++G L +Y TLIKG C+ GQ + +LL+++
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP----------------------- 186
N + ++I LC + A EM+++ +SP
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 187 ------------DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
D T N+LL+G C G+L EA + E+ + D +++NTL+
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
+ + EA L M+K+G+KPD +TY+ L+ G +N++ +AI + + G+ P+V+
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+YS++I G CK + +E F EM + P+T+ Y+ LI C+SGR+S A EL ++M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+KG + TY SL+ + V++A L ++MR +G++P+V Y L+DG K G++
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ + +++ K H TY +MI G ++G EA LL+EM +KG +PD+IT++
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 475 ICALFEKGDNYKAEK 489
I ++G +A K
Sbjct: 792 IYGYLKQGGVLEAFK 806
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 237/521 (45%), Gaps = 70/521 (13%)
Query: 50 LGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDV 109
L T+ + + G++ A + K+ + G P+ VT T+I GL + G A F + +
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 110 VARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLV 169
V RG ++Y L+KGL R + + +L+++ PNV++YN +IDS + +
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 170 SDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR------------- 216
+ A + MV K +S TYN+L+ G+C GQ A LL EM
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 217 ----------------------KNIGPDVITFNTLVDALGKEG----------------- 237
+N+ P TL+ L K G
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 238 ------------------NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
+ EA + ++ +G D +YN+L+ G C ++++A
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
L+ M +RG+ P+ ++YSI+I GL V+EA+ + + + ++PD TYS +IDG C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
K+ R E DEM +K + YN L+ C+S + A+ L + M+ +GI P+
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
TY L+ G+ R++ A+ +F+++ ++G V Y +I+G K G + LL EM
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
K P+ IT+ +I G+ +A +LL EM +G++
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 218/433 (50%), Gaps = 1/433 (0%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A V + KG P T L+ L E ++ + D VV +G + + T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
C+ G+ +++L ++E V PNVV +NT+ID L +AF +MV + + P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
++TY+ L+ G ++ +A +L EMT+K P+VI +N L+D+ + G++ +A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
+M+ +G+ TYN+L+ GYC + + A +L M G N S++ +I LC +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
M D AL EM + P ++LI GLCK G+ S A EL + NKG D T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
N+LL LC++ +D+A + K++ +G D V+YN L+ G C + +L A ++V
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYK 486
+G TY+I+I GL +EA+ + + G +PD T+ +I + +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 487 AEKLLREMMARGL 499
++ EMM++ +
Sbjct: 629 GQEFFDEMMSKNV 641
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 160/296 (54%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ E G++ AF + +IL +G D V+ TLI G C K ++ A F D++V RG + +
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
+Y LI GL M + ++Q + + + P+V Y+ +ID CK + + F
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM+ K V P+ V YN L+ +C G+L A EL ++M K I P+ T+ +L+ +
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
V+EAK + M +G++P++F Y +L+DGY + ++ K +L M + V PN +Y+
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
++I G ++ V EA L EM I+PD+ITY I G K G + A++ DE
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 153/294 (52%), Gaps = 1/294 (0%)
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A ++ + K + P T N L+ +L + ++ V+ K GV PD++ + + ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
+C ++ +A+ + + M + GV PNV +++ +I GL DEA +M + P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
ITYS L+ GL ++ RI A+ ++ EM KG P + YN+L+D ++ ++KAI +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
M +G+ TYN L+ G CK G+ NA+ + ++++ G++V ++ +I LC
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+FD AL + EM + P T+I L + G + KA +L + + +G +
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 222/397 (55%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+I A VL ++ K + PD VT +I LC +G++ AL+ + +++ + ++Y
Sbjct: 173 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYT 232
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
LI+ G +L+L+ ++ +KP++ YNTII +CK+ +V AF + + +K
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
PDV++YN LL G+ +E +L+ +M + P+V+T++ L+ L ++G ++EA
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
N+L +M ++G+ PD ++Y+ L+ +C ++ AI L +M G P++ +Y+ ++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
LCKN D+AL +F ++ + P++ +Y+++ L SG A ++ EM + G D
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
+ TYNS++ LC+ VD+A L MR P VVTYNI++ G CK R+++A V +
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
+V G TY ++I G+ G EA+ L +++
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 227/428 (53%), Gaps = 3/428 (0%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
IP A V+ +IL+K +PD LI G C + A + D + ++ F + V+Y
Sbjct: 139 NIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
+I LC G+ +L++L Q+ +P V+ Y +I++ + V +A L EM+ +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ PD+ TYN+++ G C G + A E++ + K PDVI++N L+ AL +G +E
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ ++ M + P++ TY+ L+ C +I +A+ +L M ++G+TP+ +SY +I
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
C+ +D A+ M +PD + Y++++ LCK+G+ A E+ ++ G +
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
+YN++ L S +A+ + +M GI PD +TYN ++ LC+EG + A E+
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
D+ +H +V TYNI++ G CK ++A+ +L M GC P+ T+ +I + G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Query: 483 DNYKAEKL 490
Y+AE +
Sbjct: 558 --YRAEAM 563
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 209/387 (54%), Gaps = 3/387 (0%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
GFR Q+ + CR G SL LL + P+V++ +I + + A
Sbjct: 86 GFRDTQML--KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA 143
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
+ E++ K PDV YN+L+ GFC + ++ +AT +LD M K+ PD +T+N ++ +
Sbjct: 144 VRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
L G + A VL ++ +P + TY L++ L +++A+ +++ M RG+ P+
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ +Y+ II G+CK MVD A + +E PD I+Y+ L+ L G+ +L+
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
+M ++ + TY+ L+ LC+ +++A+ L K M+++G+ PD +Y+ L+ C+EG
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
RL A E + ++ G + YN ++ LCK G D+AL + ++ + GC P++ ++
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 473 TIICALFEKGDNYKAEKLLREMMARGL 499
T+ AL+ GD +A ++ EMM+ G+
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGI 469
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 221/437 (50%), Gaps = 1/437 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G + +L +++KGY PD + T LIKG + +A++ + ++ + + + +Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDVFAY 161
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI G C+M + + ++L ++ P+ V YN +I SLC + A + ++++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
P V+TY L+ + G + EA +L+DEM + + PD+ T+NT++ + KEG V
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A ++ + +G +PD+ +YN L+ + + ++ M PNV +YSI+I
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
LC++ ++EA+NL M+ + PD +Y LI C+ GR+ A E ++ M + G
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D YN++L LCK+ D+A+ + K+ + G P+ +YN + L G A +
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+++ G TYN MI+ LC+EG+ DEA LL +M P +T+ ++ +
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 482 GDNYKAEKLLREMMARG 498
A +L M+ G
Sbjct: 522 HRIEDAINVLESMVGNG 538
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 211/400 (52%), Gaps = 10/400 (2%)
Query: 36 IHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVT 85
++ DDA + +R+ +P + + G++ A VL ++L +P +T
Sbjct: 171 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
T LI+ L+G V AL+ D++++RG + + +Y T+I+G+C+ G + +++R +E
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
+P+V+ YN ++ +L + L ++M +K P+VVTY+ L+ C G+++
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
EA LL M K + PD +++ L+ A +EG + A L M+ G PD+ YN+++
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
C + ++A+ I + + G +PN SY+ + L + AL++ EM I
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
PD ITY+S+I LC+ G + A+EL+ +M + TYN +L CK+H ++ AI +
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
+ M G +P+ TY +L++G+ G A E+ DLV
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 171/302 (56%), Gaps = 1/302 (0%)
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
C G E+ LL+ M RK PDVI L+ N+ +A V+ ++ K G +PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
F YN+L++G+C +N I+ A +L+ M + +P+ +Y+I+I LC +D AL + +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHH 378
+ P ITY+ LI+ G + A +L+DEM ++G D FTYN+++ +CK
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
VD+A + + + +G +PDV++YNIL+ L +G+ + +++ + + V TY+I
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
+I LC++G +EA+ LL M++KG PDA +++ +I A +G A + L M++ G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 499 LL 500
L
Sbjct: 399 CL 400
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 117/225 (52%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+I A ++L + +KG PDA + LI C +G + A++F + +++ G + V+Y
Sbjct: 347 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNY 406
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
T++ LC+ G+ +L++ ++ PN YNT+ +L A ++ EM+
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ PD +TYNS++ C G + EA ELL +M P V+T+N ++ K +++
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
A NVL M+ G +P+ TY L++G +A+ + N + +
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 232/392 (59%), Gaps = 5/392 (1%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G++L+ +S L+ L + ++ + +++ ++PNV +N +I++LCK ++ A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVG---QLKEATELLDEMTRKNIGPDVITFNTL 229
++ +M V SP+VV+YN+L+ G+C +G ++ +A +L EM ++ P++ TFN L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+D K+ N+ + V M+ Q VKP++ +YNSL++G C +I++AI++ + M GV
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
PN+ +Y+ +I+G CKN M+ EAL++F ++ +P T Y+ LID CK G+I +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 350 LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
L +EM +G D TYN L+ LC++ +++ A L ++ +G+ PD+VT++ILM+G C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYC 481
Query: 410 KEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME-DKGCIPDA 468
++G + A + +++ G TYNI++ G CKEG A + ++ME ++ +
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 469 ITFETIICALFEKGDNYKAEKLLREMMARGLL 500
++ ++ +KG A LL EM+ +GL+
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 231/409 (56%), Gaps = 5/409 (1%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
GY+ A++ L+ L + + +++ R + N ++ +I LC+ G+ +
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCK---DKLVSDAFNLFSEMVVKKVSPDVVTYNSL 194
++ ++ + PNVV YNT+ID CK + + A + EMV VSP++ T+N L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 195 LYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV 254
+ GF L + ++ EM +++ P+VI++N+L++ L G + EA ++ M+ GV
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 255 KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN 314
+P+L TYN+L++G+C + + +A+ + S+ +G P Y+++I CK +D+
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC 374
L EME I+PD TY+ LI GLC++G I A +L D++ +KG P D T++ L++ C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYC 481
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI-KGYHVTV 433
+ KA L K+M G++P +TYNI+M G CKEG LK A + + + + V
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
+YN+++ G ++G ++A LL+EM +KG +P+ IT+E + + ++G
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 153/281 (54%), Gaps = 2/281 (0%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+P + V ++L + +P+ ++ +LI GLC G++ A+ D +V+ G + N ++Y
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
LI G C+ + +L + V+G P MYN +ID+ CK + D F L EM +
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ PDV TYN L+ G C G ++ A +L D++T K + PD++TF+ L++ ++G ++A
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKA 489
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM-AQRGVTPNVHSYSIIIH 301
+L M K G+KP TYN +M GYC + A + M +R + NV SY++++
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
G + +++A L EM ++P+ ITY + + + G
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 192/386 (49%), Gaps = 15/386 (3%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKK----------GYRPDAVTLTTLI 90
D ++ ++ P++ F + +A GK+ K G P+ V+ TLI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 91 KGLCL---KGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
G C G++ +A ++V N ++ LI G + S+++ +++
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
VKPNV+ YN++I+ LC +S+A ++ +MV V P+++TYN+L+ GFC LKEA
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
++ + + P +N L+DA K G + + + M ++G+ PD+ TYN L+ G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
C I A + + + +G+ P++ ++ I++ G C+ +A L EM + + P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQ-PADKFTYNSLLDVLCKSHHVDKAIALT 386
+TY+ ++ G CK G + A + +M + + + +YN LL + ++ A L
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEG 412
+M ++G+ P+ +TY I+ + + +G
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 112/212 (52%), Gaps = 12/212 (5%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI----------LKKGYRPDAVTLTTLI 90
+A+ +F + G P+ + + A+ LGKI ++G PD T LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
GLC G + A + D + ++G + V++ L++G CR G++R + LL+++ +K
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV-KKVSPDVVTYNSLLYGFCIVGQLKEATE 209
P + YN ++ CK+ + A N+ ++M +++ +V +YN LL G+ G+L++A
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
LL+EM K + P+ IT+ + + + +G V +
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME-CIKIIPDTITYSSLIDGL 338
+L+S+A + S+ + G +N + ++F + C + ++I L+
Sbjct: 107 LLHSLANAKRYSKIRSF---LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAY 163
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
+ R +E G + L+ L K + + K+M + IQP+V
Sbjct: 164 ANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNV 223
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK---EGLFDEALAL 455
T+N++++ LCK G++ A++V +D+ + G V +YN +I+G CK G +A A+
Sbjct: 224 FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAE-KLLREMM 495
L EM + P+ TF +I F K DN K+ +EM+
Sbjct: 284 LKEMVENDVSPNLTTFNILIDG-FWKDDNLPGSMKVFKEML 323
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 233/433 (53%), Gaps = 1/433 (0%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
+ S +++ G+ P + L+ + + F ++ ++ L+ S+G LIK
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIK 171
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
G C G+ S LL ++ PNVV+Y T+ID CK + A +LF EM +
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ TY L+ G G K+ E+ ++M + P++ T+N +++ L K+G K+A V
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M ++GV ++ TYN+L+ G C ++N+A +++ M G+ PN+ +Y+ +I G C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
+ +AL+L +++ + P +TY+ L+ G C+ G S A ++V EM +G K TY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
L+D +S +++KAI L M + G+ PDV TY++L+ G C +G++ A +F+ +V
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYK 486
K YN MI G CKEG AL LL EME+K P+ ++ +I L ++ + +
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 487 AEKLLREMMARGL 499
AE+L+ +M+ G+
Sbjct: 532 AERLVEKMIDSGI 544
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 211/369 (57%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
E G+I +F +L ++ + G+ P+ V TTLI G C KGE+ +A ++ G N+
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y LI GL + G + ++ +++ V PN+ YN +++ LCKD DAF +F EM
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ VS ++VTYN+L+ G C +L EA +++D+M I P++IT+NTL+D G +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+A ++ + +G+ P L TYN L+ G+C + + A ++ M +RG+ P+ +Y+I+
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I ++ +++A+ L ME + ++PD TYS LI G C G+++ A L M K
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
++ YN+++ CK +A+ L K+M ++ + P+V +Y +++ LCKE + K A+
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 420 VFQDLVIKG 428
+ + ++ G
Sbjct: 535 LVEKMIDSG 543
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 224/452 (49%), Gaps = 14/452 (3%)
Query: 42 AISIFNRLLGTSPTPS------IIEFGQIPSAFSVLGKILKKGYRP---DAVTLTTLIKG 92
+IS FN ++ P ++ F S+F+ + D + LIKG
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 93 LCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN 152
C GE+ ++ ++ GF N V Y TLI G C+ G+ + L ++ + N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
Y +I+ L K+ + F ++ +M V P++ TYN ++ C G+ K+A ++ D
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
EM + + +++T+NTL+ L +E + EA V+ M G+ P+L TYN+L+DG+C V
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
++ KA+++ + RG++P++ +Y+I++ G C+ A + EME I P +TY+
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
LID +S + A +L M G D TY+ L+ C +++A L K M ++
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
+P+ V YN ++ G CKEG A ++ +++ K V +Y MI LCKE EA
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDN 484
L+ +M D G P T I +L + N
Sbjct: 533 ERLVEKMIDSGIDPS-----TSILSLISRAKN 559
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 192/358 (53%), Gaps = 3/358 (0%)
Query: 144 VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ 203
E K +Y II+S + + ++ + + F+EMV P +N LL
Sbjct: 85 TESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSS 144
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+ +E + + DV +F L+ + G ++++ ++L + + G P++ Y +
Sbjct: 145 FNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 203
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
L+DG C EI KA + M + G+ N +Y+++I+GL KN + + ++ +M+
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
+ P+ TY+ +++ LCK GR A+++ DEM +G + TYN+L+ LC+ +++A
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
+ +M+ GI P+++TYN L+DG C G+L A + +DL +G ++ TYNI+++G
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 444 CKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY-KAEKLLREMMARGLL 500
C++G A ++ EME++G P +T+ TI+ F + DN KA +L M GL+
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTY-TILIDTFARSDNMEKAIQLRLSMEELGLV 440
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 213/421 (50%), Gaps = 40/421 (9%)
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
FRL Y +I + S+ ++ + P +N ++ + + +
Sbjct: 94 FRL----YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW 149
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
+ F+E KV DV ++ L+ G C G+++++ +LL E+T P+V+ + TL+D
Sbjct: 150 SFFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
K+G +++AK++ M K G+ + TY L++G + + M + GV PN+
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
++Y+ +++ LCK+ +A +F EM + + +TY++LI GLC+ +++ A ++VD+
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M + G + TYN+L+D C + KA++L + ++ +G+ P +VTYNIL+ G C++G
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 414 LKNAQEVFQDLVIKGYHVT-----------------------------------VRTYNI 438
A ++ +++ +G + V TY++
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
+I+G C +G +EA L M +K C P+ + + T+I ++G +Y+A KLL+EM +
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 499 L 499
L
Sbjct: 509 L 509
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 10/269 (3%)
Query: 41 DAISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLI 90
DA +F+ + + +I+ + ++ A V+ ++ G P+ +T TLI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
G C G++ +AL D+ +RG + V+Y L+ G CR G T + ++++++E +K
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P+ V Y +ID+ + + A L M + PDV TY+ L++GFCI GQ+ EA+ L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
M KN P+ + +NT++ KEG+ A +L M ++ + P++ +Y +++ C
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSII 299
+ +A ++ M G+ P+ S+I
Sbjct: 526 ERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 236/441 (53%), Gaps = 1/441 (0%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
E G++ A ++ + +G P ++T+ +++ G + A D++ RG +
Sbjct: 159 EIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSS 218
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
SY ++ G R G+ + + + L + P+ I+ +LC++ LV+ A F +M
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ P+++ + SL+ G C G +K+A E+L+EM R P+V T L+D L K G
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 240 KEA-KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
++A + L ++ KP++ TY S++ GYC +++N+A + + M ++G+ PNV++Y+
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I+G CK A L M +P+ TY++ ID LCK R A+EL+++ + G
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
AD TY L+ CK + +++A+A +M G + D+ NIL+ C++ ++K ++
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
+FQ +V G T TY MI+ CKEG D AL M+ GC+PD+ T+ ++I L
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 479 FEKGDNYKAEKLLREMMARGL 499
+K +A KL M+ RGL
Sbjct: 579 CKKSMVDEACKLYEAMIDRGL 599
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 222/444 (50%), Gaps = 5/444 (1%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
++ E G + A K++ G++P+ + T+LI GLC KG +++A + +++V G++
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 117 NQVSYGTLIKGLCRMGQTRASLQL-LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
N ++ LI GLC+ G T + +L L+ V KPNV Y ++I CK+ ++ A L
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
FS M + + P+V TY +L+ G C G A EL++ M + P++ T+N +D+L K
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
+ EA +L G++ D TY L+ C N+IN+A+A M + G ++
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRL 500
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
+I+I C+ K + E+ LF + + +IP TY+S+I CK G I A + M
Sbjct: 501 NNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 560
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
G D FTY SL+ LCK VD+A L + M D+G+ P VT L CK
Sbjct: 561 RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSA 620
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
NA + + L K + TVRT ++ LC E A ++ +K D +T
Sbjct: 621 NAMILLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFT 677
Query: 476 CALFEKGDNYKAEKLLREMMARGL 499
A E G N L E ++RG+
Sbjct: 678 TACSESGKNNLVTD-LTERISRGV 700
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 214/437 (48%), Gaps = 1/437 (0%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
+E G I A +V ++ +G PD+ + ++ G G+++ A ++ ++ RGF +
Sbjct: 193 VELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDN 252
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ ++ LC G ++ R++ KPN++ + ++ID LCK + AF + E
Sbjct: 253 ATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEE 312
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI-GPDVITFNTLVDALGKEG 237
MV P+V T+ +L+ G C G ++A L ++ R + P+V T+ +++ KE
Sbjct: 313 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+ A+ + + M +QG+ P++ TY +L++G+C +A ++N M G PN+++Y+
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
I LCK EA L + + D +TY+ LI CK I+ A M+
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 358 GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
G AD N L+ C+ + ++ L + + G+ P TY ++ CKEG + A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+ F ++ G TY +I+GLCK+ + DEA L M D+G P +T T+
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYE 612
Query: 478 LFEKGDNYKAEKLLREM 494
++ D+ A LL +
Sbjct: 613 YCKRNDSANAMILLEPL 629
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 171/307 (55%), Gaps = 1/307 (0%)
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
+L F +G+L EA ++ +M + + P IT N +++ + G ++ A+NV M +G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
V PD +Y ++ G +I +A L M QRG P+ + ++I+ LC+N +V+ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
F +M + P+ I ++SLIDGLCK G I A+E+++EM G + +T+ +L+D L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 374 CKSHHVDKAIALTKKM-RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
CK +KA L K+ R +P+V TY ++ G CKE +L A+ +F + +G
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 433 VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLR 492
V TY +ING CK G F A L++ M D+G +P+ T+ I +L +K +A +LL
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 493 EMMARGL 499
+ + GL
Sbjct: 453 KAFSCGL 459
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 240/473 (50%), Gaps = 14/473 (2%)
Query: 41 DAISIFNRLLG----TSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTL 86
D I + +RLL P P+++ F G++ AF + + ++G PD +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
+TLI G G + + + +G +L+ V + + I + G + + +++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
+ PNVV Y +I LC+D + +AF ++ +++ + + P +VTY+SL+ GFC G L+
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
L ++M + PDV+ + LVD L K+G + A M+ Q ++ ++ +NSL+D
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G+C +N ++A+ + M G+ P+V +++ ++ ++EAL LF M + + P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
D + Y +LID CK + + +L D M AD N ++ +L K H ++ A
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+ + ++PD+VTYN ++ G C RL A+ +F+ L + + T I+I+ LCK
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D A+ + S M +KG P+A+T+ ++ + D + KL EM +G+
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 233/448 (52%)
Query: 52 TSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA 111
+S ++ G + +A V ++L +G P+ VT T LIKGLC G + A + ++
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
RG + V+Y +LI G C+ G R+ L + P+VV+Y ++D L K L+
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A +M+ + + +VV +NSL+ G+C + + EA ++ M I PDV TF T++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
EG ++EA + M K G++PD Y +L+D +C + + + + M + ++
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
++ +++IH L K +++A F + K+ PD +TY+++I G C R+ A +
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
+ + + T L+ VLCK++ +D AI + M ++G +P+ VTY LMD K
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
++ + ++F+++ KG ++ +Y+I+I+GLCK G DEA + + D +PD + +
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 779
Query: 472 ETIICALFEKGDNYKAEKLLREMMARGL 499
+I + G +A L M+ G+
Sbjct: 780 AILIRGYCKVGRLVEAALLYEHMLRNGV 807
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 221/433 (51%), Gaps = 10/433 (2%)
Query: 45 IFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLC 94
++ R+L +P+++ + G+I AF + G+ILK+G P VT ++LI G C
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 95 LKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV 154
G +R ++D++ G+ + V YG L+ GL + G +++ ++ G ++ NVV
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
++N++ID C+ +A +F M + + PDV T+ +++ + G+L+EA L M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
+ + PD + + TL+DA K + +M + + D+ N ++ + I
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
A N++ + + P++ +Y+ +I G C + +DEA +F ++ P+T+T + L
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I LCK+ + A + M KG + TY L+D KS ++ + L ++M+++GI
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
P +V+Y+I++DGLCK GR+ A +F + V Y I+I G CK G EA
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Query: 455 LLSEMEDKGCIPD 467
L M G PD
Sbjct: 798 LYEHMLRNGVKPD 810
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 201/409 (49%), Gaps = 2/409 (0%)
Query: 73 KILKKGYRPDAVTLTTLI-KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM 131
K+ + G P V+ + L KGEV +AL FH V+ RGFR+ VS ++KGL +
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SV 264
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
Q + +LL V PNVV + T+I+ CK + AF+LF M + + PD++ Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
++L+ G+ G L +L + K + DV+ F++ +D K G++ A V M+
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
QG+ P++ TY L+ G C I +A + + +RG+ P++ +YS +I G CK +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
L+ +M + PD + Y L+DGL K G + HA +M + + +NSL+D
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
C+ + D+A+ + + M GI+PDV T+ +M EGRL+ A +F + G
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
Y +I+ CK L L M+ D +I LF+
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 191/409 (46%), Gaps = 80/409 (19%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+A ++ ++L PSI+ + G + S F++ ++K GY PD V L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV------ 144
GL +G + A++F ++ + RLN V + +LI G CR+ + +L++ R +
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 145 ---------------EGHL--------------VKPNVVMYNTIIDSLCK---------- 165
EG L ++P+ + Y T+ID+ CK
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 166 ------DKL-------------------VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
+K+ + DA F+ ++ K+ PD+VTYN+++ G+C
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
+ +L EA + + + GP+ +T L+ L K ++ A + ++M ++G KP+ T
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
Y LMD + +I + + M ++G++P++ SYSIII GLCK VDEA N+F +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
K++PD + Y+ LI G CK GR+ A L + M G D +L
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Query: 35 SIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAV 84
S+ D+A IF L T P+ + + A + + +KG +P+AV
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T L+ ++ + + +++ +G + VSY +I GLC+ G+ + + Q
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
+ P+VV Y +I CK + +A L+ M+ V PD
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 257/515 (49%), Gaps = 35/515 (6%)
Query: 12 SFLRLNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFG---QIPSAF 68
S +RL N ++ + H D A+ +F+R++ EF + S
Sbjct: 101 SRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD--------EFRCKRSVKSFN 152
Query: 69 SVLGKILKKGY--------------------RPDAVTLTTLIKGLCLKGEVRRALQFHDD 108
SVL I+ +G P+ ++ +IK LC V RA++
Sbjct: 153 SVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRG 212
Query: 109 VVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
+ R + +Y TL+ GLC+ + ++ LL +++ P+ V+YN +ID LCK
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
++ L M +K P+ VTYN+L++G C+ G+L +A LL+ M P+ +T+ T
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
L++ L K+ +A +L+ M ++G + Y+ L+ G + +A+++ MA++G
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
PN+ YS+++ GLC+ +EA + M +P+ TYSSL+ G K+G A
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
++ EM G +KF Y+ L+D LC V +A+ + KM GI+PD V Y+ ++ GL
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 409 CKEGRLKNAQEVFQDLVIK---GYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
C G + A +++ +++ + V TYNI+++GLC + A+ LL+ M D+GC
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572
Query: 466 PDAITFETIICALFEKGDNY-KAEKLLREMMARGL 499
PD IT T + L EK ++ K L E++ R L
Sbjct: 573 PDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLL 607
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 162/282 (57%), Gaps = 4/282 (1%)
Query: 223 VITFNTLVDALGKEG----NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAI 278
V +FN++++ + EG ++ V+ M + P+ ++N ++ C + +++AI
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
+ M +R P+ ++Y ++ GLCK + +DEA+ L EM+ P + Y+ LIDGL
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
CK G ++ +LVD M KG ++ TYN+L+ LC +DKA++L ++M P+
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
VTY L++GL K+ R +A + + +GYH+ Y+++I+GL KEG +EA++L +
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
M +KGC P+ + + ++ L +G +A+++L M+A G L
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 185/428 (43%), Gaps = 99/428 (23%)
Query: 40 DDAISIFNRLL--GTSPTPSIIEF--------GQIPSAFSVLGKILKKGYRPDAVTLTTL 89
D+A+ + + + G SP+P I G + ++ + KG P+ VT TL
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 90 IKGLCLKGEVRRALQFHDDVVA-----------------------------------RGF 114
I GLCLKG++ +A+ + +V+ RG+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
LNQ Y LI GL + G+ ++ L R++ KPN+V+Y+ ++D LC++ ++A
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
+ + M+ P+ TY+SL+ GF G +EA ++ EM + + ++ L+D L
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 235 KEGNVKEAKNVLAVMMKQGVKPD------------------------------------- 257
G VKEA V + M+ G+KPD
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 258 -LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC-KNKMVDEALNL 315
+ TYN L+DG C+ +I++A+ +LNSM RG P+V + + ++ L K+ D+ +
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
E L+ L K R+S A +V+ M K T+ ++ +CK
Sbjct: 599 LEE---------------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
Query: 376 SHHVDKAI 383
++ AI
Sbjct: 644 PKKINAAI 651
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 145/290 (50%), Gaps = 29/290 (10%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTT 88
A++A+S++ ++ P+I+ + G+ A +L +++ G P+A T ++
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
L+KG G A+Q ++ G N+ Y LI GLC +G+ + ++ + ++
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK---KVSPDVVTYNSLLYGFCIVGQLK 205
+KP+ V Y++II LC + A L+ EM+ + K PDVVTYN LL G C+ +
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGN-VKEAKNVLAVMMKQGVKPDLFTYNSL 264
A +LL+ M + PDVIT NT ++ L ++ N + ++ L ++ + +K
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKR-------- 609
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN 314
++ A I+ M + + P ++++I+ +CK K ++ A++
Sbjct: 610 -------QRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 244/455 (53%), Gaps = 12/455 (2%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGE 98
D ++ I+N +L T ++ +I + V + + G+ P+ T L+K LC +
Sbjct: 142 CDPSVKIYNHVLDT-----LLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 99 VRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNT 158
V A + ++ +G + VSY T+I +C +G + +L + E P V +YN
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNA 251
Query: 159 IIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKN 218
+I+ LCK+ AF L EMV K +SP+V++Y++L+ C GQ++ A L +M ++
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 219 IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ-GVKPDLFTYNSLMDGYCLVNEINKA 277
P++ T ++LV G +A ++ M++ G++P++ YN+L+ G+C I KA
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG 337
+++ + M + G +PN+ +Y +I+G K +D A+ ++ +M P+ + Y+++++
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 338 LCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG-IQP 396
LC+ + A L++ M + T+N+ + LC + +D A + ++M Q P
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
++VTYN L+DGL K R++ A + +++ ++G + TYN +++G C GL AL L+
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Query: 457 SEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
+M G PD IT II A ++G +A ++L
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 223/443 (50%), Gaps = 11/443 (2%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+ G A + +I + G P ++ L + ++ + D+ GF N
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y L+K LC+ + + +LL ++ P+ V Y T+I S+C+ LV + L
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL---- 238
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
++ P V YN+L+ G C K A EL+ EM K I P+VI+++TL++ L G +
Sbjct: 239 -AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR-GVTPNVHSYSI 298
+ A + L M+K+G P+++T +SL+ G L A+ + N M + G+ PNV +Y+
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
++ G C + + +A+++F+ ME I P+ TY SLI+G K G + A + ++M G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+ Y ++++ LC+ +A +L + M + P V T+N + GLC GRL A+
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 419 EVFQDLVIKGYH---VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+VF+ + + H + TYN +++GL K +EA L E+ +G + T+ T++
Sbjct: 478 KVFRQM--EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 476 CALFEKGDNYKAEKLLREMMARG 498
G A +L+ +MM G
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDG 558
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 217/442 (49%), Gaps = 11/442 (2%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
GQ+ S +L ++ +G+ ++I G RA++ + G + Y
Sbjct: 90 GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149
Query: 122 GTLIKGLCRMGQTRASL--QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++ L +G+ R + + R ++ +PNV YN ++ +LCK+ V A L EM
Sbjct: 150 NHVLDTL--LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 207
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
K PD V+Y +++ C VG +KE EL + P V +N L++ L KE +
Sbjct: 208 SNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDY 262
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
K A ++ M+++G+ P++ +Y++L++ C +I A + L M +RG PN+++ S +
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 300 IHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+ G +AL+L+ +M + P+ + Y++L+ G C G I A + M G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+ TY SL++ K +D A+ + KM G P+VV Y +++ LC+ + K A+
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG-CIPDAITFETIICA 477
+ + + + +V T+N I GLC G D A + +ME + C P+ +T+ ++
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 478 LFEKGDNYKAEKLLREMMARGL 499
L + +A L RE+ RG+
Sbjct: 503 LAKANRIEEAYGLTREIFMRGV 524
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 229/468 (48%), Gaps = 15/468 (3%)
Query: 29 SHSLSPSIHNAD-DAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLT 87
+H L+ S ++A+ + + RL S P + F + S+ L ++ +T
Sbjct: 29 NHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFK-----SIANSNL---FKHTPLTFE 80
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
+I+ L + G+V + +GF ++ + ++I ++G ++++ +++
Sbjct: 81 VMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF 140
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
P+V +YN ++D+L + + + ++ +M P+V TYN LL C ++ A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+LL EM+ K PD +++ T++ ++ + G VKE + + + +P + YN+L++G
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYNALING 255
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
C ++ A ++ M ++G++PNV SYS +I+ LC + ++ A + +M P+
Sbjct: 256 LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
T SSL+ G G A +L ++M G + YN+L+ C ++ KA+++
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
M + G P++ TY L++G K G L A ++ ++ G V Y M+ LC+
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
F EA +L+ M + C P TF I L + G AEK+ R+M
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 200/379 (52%), Gaps = 4/379 (1%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
AF ++ ++++KG P+ ++ +TLI LC G++ A F ++ RG N + +L+K
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 127 GLCRMGQTRASLQLLRQ-VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
G G T +L L Q + G ++PNVV YNT++ C + A ++FS M S
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
P++ TY SL+ GF G L A + ++M P+V+ + +V+AL + KEA+++
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG-VTPNVHSYSIIIHGLC 304
+ +M K+ P + T+N+ + G C ++ A + M Q+ PN+ +Y+ ++ GL
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504
Query: 305 KNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
K ++EA L E+ + + TY++L+ G C +G A +LV +M G+ D+
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEI 564
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMR--DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
T N ++ CK ++A + + + +PDV++Y ++ GLC+ ++ + +
Sbjct: 565 TMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624
Query: 423 DLVIKGYHVTVRTYNIMIN 441
++ G ++ T++++IN
Sbjct: 625 RMISAGIVPSIATWSVLIN 643
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 37 HNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLK 96
H I +N LL + + +I A+ + +I +G + T TL+ G C
Sbjct: 487 HRCPPNIVTYNELLD-----GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 97 GEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG--HLVKPNVV 154
G ALQ ++ G ++++ +I C+ G+ + Q+L V +P+V+
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
Y +I LC+ D L M+ + P + T++ L+ F
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA--RGFRLNQVSYGTL 124
A ++GK++ G PD +T+ +I C +G+ RA Q D V R +R + +SY +
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNV 606
Query: 125 IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLV 169
I GLCR + LL ++ + P++ ++ +I+ D +V
Sbjct: 607 IWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIV 651
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 232/463 (50%), Gaps = 35/463 (7%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A V +++ +G+RP T ++L+ GL + ++ + ++ G + N ++ I+
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
L R G+ + ++L++++ P+VV Y +ID+LC + + A +F +M + P
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D VTY +LL F L + EM + PDV+TF LVDAL K GN EA + L
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII------ 300
VM QG+ P+L TYN+L+ G V+ ++ A+ + +M GV P ++Y + I
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 301 -----------------------------HGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ L K EA +F ++ I ++PD++TY
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+ ++ K G I A +L+ EM G D NSL++ L K+ VD+A + +M++
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
++P VVTYN L+ GL K G+++ A E+F+ +V KG T+N + + LCK
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
AL +L +M D GC+PD T+ TII L + G +A +M
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 219/472 (46%), Gaps = 35/472 (7%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G + A L K+ + G+ +A + LI L A++ + ++ GFR + +Y
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+L+ GL + + + LL+++E +KPNV + I L + +++A+ + M
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ PDVVTY L+ C +L A E+ ++M PD +T+ TL+D ++
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
K + M K G PD+ T+ L+D C +A L+ M +G+ PN+H+Y+ +I
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG-QP 360
GL + +D+AL LF ME + + P TY ID KSG A E ++M KG P
Sbjct: 407 GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 466
Query: 361 ----------------------------------ADKFTYNSLLDVLCKSHHVDKAIALT 386
D TYN ++ K +D+AI L
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 526
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+M + G +PDV+ N L++ L K R+ A ++F + TV TYN ++ GL K
Sbjct: 527 SEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
G EA+ L M KGC P+ ITF T+ L + + A K+L +MM G
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 252/523 (48%), Gaps = 54/523 (10%)
Query: 30 HSLSPSIHNAD---DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILK 76
+SL +++ AD +A +F R+ P+++ + G+I A + +++
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 77 KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRA 136
KG P+ +T TL LC EV AL+ ++ G + +Y T+I GL + GQ +
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF---------------NLFSEMVV 181
++ Q++ LV P+ V T++ + K L+ DA+ NLF E ++
Sbjct: 662 AMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720
Query: 182 KKVSPDVVTYNSLLY-------GFCIVG---------------QLKEATELLDEMTRK-N 218
+ + N++ + G C G + A L ++ T+
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 219 IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAI 278
+ P + T+N L+ L + ++ A++V + G PD+ TYN L+D Y +I++
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE-MECIKIIPDTITYSSLIDG 337
+ M+ N +++I+I GL K VD+AL+L+ + M P TY LIDG
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 338 LCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPD 397
L KSGR+ A +L + M + G + YN L++ K+ D A AL K+M +G++PD
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 398 VVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLS 457
+ TY++L+D LC GR+ F++L G + V YN++INGL K +EAL L +
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 458 EME-DKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EM+ +G PD T+ ++I L G +A K+ E+ GL
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 224/472 (47%), Gaps = 39/472 (8%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ A + G + G +P A T I G+ AL+ + + +G N V+
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
+ L + G+ R + Q+ ++ + P+ V YN ++ K + +A L SEM+
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
PDV+ NSL+ ++ EA ++ M + P V+T+NTL+ LGK G ++EA
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ M+++G P+ T+N+L D C +E+ A+ +L M G P+V +Y+ II G
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 652
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE-MHN-KGQP 360
L KN V EA+ F +M+ + + PD +T +L+ G+ K+ I A++++ ++N QP
Sbjct: 653 LVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 361 ADKFTYNSLLDVL-----------------------------------CKSHHVDKAIAL 385
A+ F + + +L CK ++V A L
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 386 TKKM-RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
+K +D G+QP + TYN+L+ GL + ++ AQ+VF + G V TYN +++
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 445 KEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
K G DE L EM C + IT +I L + G+ A L ++M+
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 200/414 (48%)
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T +++ L + G++ D + R + + +Y T+ K L G + + LR++
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
N YN +I L K + ++A ++ M+++ P + TY+SL+ G +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
LL EM + P+V TF + LG+ G + EA +L M +G PD+ TY L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+D C +++ A + M P+ +Y ++ N+ +D ++EME
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
+PD +T++ L+D LCK+G A++ +D M ++G + TYN+L+ L + H +D A+
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
L M G++P TY + +D K G +A E F+ + KG + N + L
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 445 KEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
K G EA + ++D G +PD++T+ ++ + G+ +A KLL EMM G
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 209/428 (48%), Gaps = 8/428 (1%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
K G+ PD VT T L+ LC G A D + +G N +Y TLI GL R+ +
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+L+L +E VKP Y ID K A F +M K ++P++V N+ L
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
Y G+ +EA ++ + + PD +T+N ++ K G + EA +L+ MM+ G +
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
PD+ NSL++ + +++A + M + + P V +Y+ ++ GL KN + EA+ L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
F M P+TIT+++L D LCK+ ++ A +++ +M + G D FTYN+++ L K
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
+ V +A+ +M+ + + PD VT L+ G+ K +++A ++ + + Y+ +
Sbjct: 656 NGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL---YNCADQP 711
Query: 436 YNI----MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
N+ +I + E D A++ + G D + I K +N + L
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 492 REMMARGL 499
E + L
Sbjct: 772 FEKFTKDL 779
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 196/389 (50%), Gaps = 4/389 (1%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVT-LTTLIKGLCLKGEVRRALQFHDDVVAR-GF 114
SI+ I +A S +++ G D + L +I+ C V A + G
Sbjct: 722 SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV 781
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+ +Y LI GL + + QV+ P+V YN ++D+ K + + F
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL-DEMTRKNIGPDVITFNTLVDAL 233
L+ EM + + +T+N ++ G G + +A +L D M+ ++ P T+ L+D L
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
K G + EAK + M+ G +P+ YN L++G+ E + A A+ M + GV P++
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+YS+++ LC VDE L+ F E++ + PD + Y+ +I+GL KS R+ A L +E
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 354 MH-NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M ++G D +TYNSL+ L + V++A + +++ G++P+V T+N L+ G G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
+ ++A V+Q +V G+ TY + N
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 196/424 (46%), Gaps = 5/424 (1%)
Query: 56 PSIIEFGQIPSAFSVLGKILKK-GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF 114
P +++ I A+ ++ L +P + LI + + + A+ F + +VA G
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 115 -RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDA 172
R +I+ C+ + L + L V+P + YN +I L + ++ A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
++F ++ PDV TYN LL + G++ E EL EM+ + IT N ++
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 233 LGKEGNVKEAKNVLAVMMK-QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
L K GNV +A ++ +M + P TY L+DG + +A + M G P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
N Y+I+I+G K D A LF M + PD TYS L+D LC GR+
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR-DQGIQPDVVTYNILMDGLCK 410
E+ G D YN +++ L KSH +++A+ L +M+ +GI PD+ TYN L+ L
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
G ++ A +++ ++ G V T+N +I G G + A A+ M G P+ T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 471 FETI 474
+E +
Sbjct: 1105 YEQL 1108
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 7/403 (1%)
Query: 101 RALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV----MY 156
++ F ++ + + + S + +GL T +S + V G+L N+V
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNL---NLVHTTETC 121
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
N ++++L D + + +F M + + D TY ++ + G LK+A L +M
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
+ ++N L+ L K EA V M+ +G +P L TY+SLM G +I+
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
+ +L M G+ PNV++++I I L + ++EA + M+ PD +TY+ LID
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
LC + ++ A E+ ++M D+ TY +LLD + +D +M G P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
DVVT+ IL+D LCK G A + + +G + TYN +I GL + D+AL L
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 457 SEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
ME G P A T+ I + GD+ A + +M +G+
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 218/508 (42%), Gaps = 49/508 (9%)
Query: 41 DAISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+AI +F ++ P+ I F ++ A +L K++ G PD T T+I
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 91 KGLCLKGEVRRALQF--------HDDVVARGFRLNQVSYGTLIKG--------------- 127
GL G+V+ A+ F + D V L V +LI+
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 128 -------------LCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
L G A R V + + + II CK VS A
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770
Query: 175 LFSEMVVK-KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
LF + V P + TYN L+ G ++ A ++ ++ PDV T+N L+DA
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL-NSMAQRGVTPN 292
GK G + E + M + + T+N ++ G ++ A+ + + M+ R +P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+Y +I GL K+ + EA LF M P+ Y+ LI+G K+G A L
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M +G D TY+ L+D LC VD+ + K++++ G+ PDVV YN++++GL K
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 413 RLKNAQEVFQDL-VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
RL+ A +F ++ +G + TYN +I L G+ +EA + +E++ G P+ TF
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 472 ETIICALFEKGDNYKAEKLLREMMARGL 499
+I G A + + M+ G
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 203/439 (46%), Gaps = 9/439 (2%)
Query: 66 SAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV----SY 121
S FS G +++K +PD + + +GL + + + V LN V +
Sbjct: 67 SDFS--GSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGN---LNLVHTTETC 121
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+++ L G+ + ++ ++K + Y TI SL + A +M
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ +YN L++ EA E+ M + P + T+++L+ LGK ++
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+L M G+KP+++T+ + +IN+A IL M G P+V +Y+++I
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
LC + +D A +F +M+ + PD +TY +L+D + + + EM G
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D T+ L+D LCK+ + +A MRDQGI P++ TYN L+ GL + RL +A E+F
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
++ G T TY + I+ K G AL +M+ KG P+ + + +L +
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 482 GDNYKAEKLLREMMARGLL 500
G + +A+++ + GL+
Sbjct: 482 GRDREAKQIFYGLKDIGLV 500
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 7/329 (2%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA 102
+ +N L+G +IE Q V ++ G PD T L+ G++
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQ-----DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV-EGHLVKPNVVMYNTIID 161
+ + ++ N +++ +I GL + G +L L + P Y +ID
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
L K + +A LF M+ P+ YN L+ GF G+ A L M ++ + P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D+ T++ LVD L G V E + + + G+ PD+ YN +++G + + +A+ +
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 282 NSM-AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
N M RG+TP++++Y+ +I L MV+EA ++ E++ + P+ T+++LI G
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSL 369
SG+ HA+ + M G + TY L
Sbjct: 1080 SGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 12/239 (5%)
Query: 38 NADDAISIFNRLLGTSP-TPSIIEFGQIPSAFSVLGKI----------LKKGYRPDAVTL 86
N DDA+ ++ L+ +P+ +G + S G++ L G RP+
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 929
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
LI G GE A +V G R + +Y L+ LC +G+ L ++++
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK-VSPDVVTYNSLLYGFCIVGQLK 205
+ P+VV YN II+ L K + +A LF+EM + ++PD+ TYNSL+ I G ++
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
EA ++ +E+ R + P+V TFN L+ G + A V M+ G P+ TY L
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 225/474 (47%), Gaps = 30/474 (6%)
Query: 51 GTSPTPSIIEF--------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGE---- 98
G P+P I G A+ +L K++K G+ P V LI +C +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 99 --VRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMY 156
+ A + + +++A G LN+++ + + LC G+ + ++R++ G P+ Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
+ +++ LC + AF LF EM + DV TY ++ FC G +++A + +EM
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
P+V+T+ L+ A K V A + M+ +G P++ TY++L+DG+C ++ K
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 277 AIAILNSMA----------------QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
A I M PNV +Y ++ G CK+ V+EA L M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
P+ I Y +LIDGLCK G++ A E+ EM G PA +TY+SL+D K D
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
A + KM + P+VV Y ++DGLCK G+ A ++ Q + KG V TY MI
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+G G + L LL M KG P+ +T+ +I + G A LL EM
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 231/469 (49%), Gaps = 24/469 (5%)
Query: 45 IFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ 104
+ N++ +S T + G+ AFSV+ +++ +G+ PD T + ++ LC ++ A
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMG---QTRASLQLLRQVEGHLVKPNVVMYNTIID 161
+++ G + +Y ++ C+ G Q R +R+V PNVV Y +I
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG---CTPNVVTYTALIH 561
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
+ K K VS A LF M+ + P++VTY++L+ G C GQ+++A ++ + M P
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 222 D----------------VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
D V+T+ L+D K V+EA+ +L M +G +P+ Y++L+
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
DG C V ++++A + M++ G +++YS +I K K D A + ++M
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
P+ + Y+ +IDGLCK G+ A++L+ M KG + TY +++D ++ + L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
++M +G+ P+ VTY +L+D CK G L A + +++ + Y +I G K
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
E F E+L LL E+ P + +I L + A +LL E+
Sbjct: 862 E--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 228/503 (45%), Gaps = 65/503 (12%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPS----------AFSVLGKILKKGYRPDAVTLTTL 89
+ A S+ ++G P + ++ + AF + ++ + G D T T +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ C G + +A ++ +++ G N V+Y LI + + + +L +
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV----------------VTYNS 193
PN+V Y+ +ID CK V A +F M K PDV VTY +
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
LL GFC +++EA +LLD M+ + P+ I ++ L+D L K G + EA+ V M + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
L+TY+SL+D Y V + A +L+ M + PNV Y+ +I GLCK DEA
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
L ME P+ +TY+++IDG G+I EL++ M +KG + TY L+D
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 374 CKSHHVDKAIALTKKMRD--------------QGIQ-------------------PDVVT 400
CK+ +D A L ++M+ +G P +
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSV 884
Query: 401 YNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV----RTYNIMINGLCKEGLFDEALALL 456
Y +L+D L K RL+ A + ++ + + T+ TYN +I LC + A L
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 457 SEMEDKGCIPDAITFETIICALF 479
SEM KG IP+ +F ++I LF
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLF 965
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 220/452 (48%), Gaps = 33/452 (7%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAF----------SVLGKILKKGYRPDAVTLTTL 89
+ A FN + TP+++ + + A+ + +L +G P+ VT + L
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 90 IKGLCLKGEVRRALQFHD-----------DVVARGF-----RLNQVSYGTLIKGLCRMGQ 133
I G C G+V +A Q + D+ + + R N V+YG L+ G C+ +
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 134 TRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
+ +LL + +PN ++Y+ +ID LCK + +A + +EM + TY+S
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
L+ + V + A+++L +M + P+V+ + ++D L K G EA ++ +M ++G
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
+P++ TY +++DG+ ++ +I + +L M +GV PN +Y ++I CKN +D A
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
NL EM+ T Y +I+G K + L+DE+ Y L+D L
Sbjct: 835 NLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 374 CKSHHVDKAIALTKKMR--DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
K+ ++ A+ L +++ + TYN L++ LC +++ A ++F ++ KG
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Query: 432 TVRTYNIMINGLCKEGLFDEALALL---SEME 460
++++ +I GL + EAL LL S ME
Sbjct: 953 EMQSFCSLIKGLFRNSKISEALLLLDFISHME 984
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 224/505 (44%), Gaps = 35/505 (6%)
Query: 20 PVVSKPSFHSHSLSPSIHNADDA--------ISIFNRLLGTSPTPSIIEFGQIPSA---- 67
P++++ S + +++ ++ DD + F L S ++ PSA
Sbjct: 92 PIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISF 151
Query: 68 FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF-----HDDVVARGFRLNQVSYG 122
F G+ + GY+ A L+ + + + +F DD G LN
Sbjct: 152 FVWAGRQI--GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLN----- 204
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
L++ CR G +L+ L +++ +P+ YN +I + K + A + EM +
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ D T Y C VG+ +EA L++ +N PD + + L+ L + +EA
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ L M P++ TY++L+ G ++ + +LN M G P+ ++ ++H
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD-------EMH 355
C + A L +M +P + Y+ LI +C + S +L+D EM
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC-GDKDSLNCDLLDLAEKAYSEML 440
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
G +K +S LC + +KA ++ ++M QG PD TY+ +++ LC +++
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A +F+++ G V TY IM++ CK GL ++A +EM + GC P+ +T+ +I
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 476 CALFEKGDNYKAEKLLREMMARGLL 500
A + A +L M++ G L
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCL 585
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 185/384 (48%), Gaps = 30/384 (7%)
Query: 40 DDAISIFNRLLGT----------------SPTPSIIEFG----------QIPSAFSVLGK 73
+ A IF R+ G+ S P+++ +G ++ A +L
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQ 133
+ +G P+ + LI GLC G++ A + ++ GF +Y +LI ++ +
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 134 TRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
+ ++L ++ + PNVV+Y +ID LCK +A+ L M K P+VVTY +
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
++ GF ++G+++ ELL+ M K + P+ +T+ L+D K G + A N+L M +
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
Y +++G+ E +++ +L+ + Q P + Y ++I L K + ++ AL
Sbjct: 845 WPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 314 NLFAEMECIK--IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
L E+ ++ + TY+SLI+ LC + ++ A++L EM KG + ++ SL+
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQ 395
L ++ + +A+ L + IQ
Sbjct: 963 GLFRNSKISEALLLLDFISHMEIQ 986
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 239/473 (50%), Gaps = 37/473 (7%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+ A L + K+G++PD + +T+I L G++ AL+ D++ RG + Y
Sbjct: 164 EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN 223
Query: 123 TLIKGLCRMGQTRASLQLL-RQVEGHLVKPNV---------------------------- 153
LI G + + +++L R +E V PNV
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 154 -------VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
Y+++I LC V A ++F+E+ +K S DVVTYN++L GFC G++KE
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
+ EL M KN +++++N L+ L + G + EA + +M +G D TY +
Sbjct: 344 SLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH 402
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G C+ +NKA+ ++ + G +V++Y+ II LCK K ++EA NL EM +
Sbjct: 403 GLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
++ ++LI GL + R+ A + EM G +YN L+ LCK+ +A A
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
K+M + G +PD+ TY+IL+ GLC++ ++ A E++ + G V +NI+I+GLC
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSV 582
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G D+A+ +++ ME + C + +T+ T++ F+ GD+ +A + M GL
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 235/472 (49%), Gaps = 13/472 (2%)
Query: 40 DDAISIFNRL---LGTSPT--------PSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTT 88
D A+ +F R+ G P + +E Q S+ G P+ T
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
LIK C K E +A F D + GF+ + SY T+I L + G+ +L+L ++
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV-KKVSPDVVTYNSLLYGFCIVGQLKEA 207
V P+V YN +ID K+K A L+ ++ V P+V T+N ++ G G++ +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
++ + M + D+ T+++L+ L GNV +A++V + ++ D+ TYN+++ G
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
+C +I +++ + M + + N+ SY+I+I GL +N +DEA ++ M D
Sbjct: 335 FCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
TY I GLC +G ++ A ++ E+ + G D + Y S++D LCK +++A L K
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
+M G++ + N L+ GL ++ RL A +++ G TV +YNI+I GLCK G
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
F EA A + EM + G PD T+ ++C L A +L + + GL
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 219/451 (48%), Gaps = 12/451 (2%)
Query: 42 AISIFNRLL-GTSPTPSIIEFGQIPSAFSVLGKI---------LKKGYRP-DAVTLTTLI 90
A+ +++RLL +S P++ + S S G++ +K+ R D T ++LI
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
GLC G V +A +++ R ++ V+Y T++ G CR G+ + SL+L R +E H
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME-HKNS 356
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
N+V YN +I L ++ + +A ++ M K + D TY ++G C+ G + +A +
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+ E+ DV + +++D L K+ ++EA N++ M K GV+ + N+L+ G
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+ + +A L M + G P V SY+I+I GLCK EA EM PD T
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
YS L+ GLC+ +I A EL + G D +N L+ LC +D A+ + M
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+ ++VTYN LM+G K G A ++ + G + +YN ++ GLC
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEK 481
A+ + + G P T+ ++ A+ +
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 192/380 (50%), Gaps = 15/380 (3%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI---------LKKGYRPDAVTLTT 88
N D A S+FN L + ++ + + F GKI ++ + V+
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI 364
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE--- 145
LIKGL G++ A + A+G+ ++ +YG I GLC G +L ++++VE
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
GHL +V Y +IID LCK K + +A NL EM V + N+L+ G +L
Sbjct: 425 GHL---DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
EA+ L EM + P V+++N L+ L K G EA + M++ G KPDL TY+ L+
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
G C +I+ A+ + + Q G+ +V ++I+IHGLC +D+A+ + A ME
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
+ +TY++L++G K G + A + M+ G D +YN+++ LC V A+
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 386 TKKMRDQGIQPDVVTYNILM 405
R+ GI P V T+NIL+
Sbjct: 662 FDDARNHGIFPTVYTWNILV 681
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 216/424 (50%), Gaps = 10/424 (2%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR-GFRLNQVSYGTLIKGLCRMGQTRASLQ 139
P +++ ++K L + R A D G+ + V Y +++ R+ +TR
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILR---RLSETRMVNH 61
Query: 140 LLRQVE---GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV-VKKVSPDVVTYNSLL 195
+ R VE K + + ++I + K+ + A ++F M + P + +YN+LL
Sbjct: 62 VSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
F Q + L + P++ T+N L+ K+ ++A+ L M K+G K
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
PD+F+Y+++++ +++ A+ + + M++RGV P+V Y+I+I G K K A+ L
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 316 FAE-MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC 374
+ +E + P+ T++ +I GL K GR+ ++ + M + D +TY+SL+ LC
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ +VDKA ++ ++ ++ DVVTYN ++ G C+ G++K + E+++ + K V +
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIV 360
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+YNI+I GL + G DEA + M KG D T+ I L G KA +++E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 495 MARG 498
+ G
Sbjct: 421 ESSG 424
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 205/380 (53%)
Query: 96 KGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVM 155
+G + +A D ++A G +Y +LI+G CR R +LL +++ + +
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
Y T++ +C + A+N+ EM+ P+VV Y +L+ F + +A +L EM
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
+ I PD+ +N+L+ L K + EA++ L M++ G+KP+ FTY + + GY +E
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
A + M + GV PN + +I+ CK V EA + + M I+ D TY+ L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
+GL K+ ++ A E+ EM KG D F+Y L++ K ++ KA ++ +M ++G+
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
P+V+ YN+L+ G C+ G ++ A+E+ ++ +KG H TY +I+G CK G EA L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 456 LSEMEDKGCIPDAITFETII 475
EM+ KG +PD+ + T++
Sbjct: 720 FDEMKLKGLVPDSFVYTTLV 739
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 236/459 (51%), Gaps = 5/459 (1%)
Query: 47 NRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFH 106
N ++ T+ + ++ + A VL ++ ++G PD +LI GL + A F
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 107 DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKD 166
++V G + N +YG I G + ++ + ++++ V PN V+ +I+ CK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF 226
V +A + + MV + + D TY L+ G ++ +A E+ EM K I PDV ++
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
L++ K GN+++A ++ M+++G+ P++ YN L+ G+C EI KA +L+ M+
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
+G+ PN +Y II G CK+ + EA LF EM+ ++PD+ Y++L+DG C+ +
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI----QPDVVTYN 402
A + + KG + +N+L++ + K + + ++ D +P+ VTYN
Sbjct: 751 AITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
I++D LCKEG L+ A+E+F + TV TY ++NG K G E + E
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Query: 463 GCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLE 501
G PD I + II A ++G KA L+ +M A+ ++
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 214/434 (49%), Gaps = 1/434 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G + A ++ ++ G P A +LI+G C + VR+ + ++ R ++ +Y
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
GT++KG+C G + +++++ +PNVV+Y T+I + ++ DA + EM
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ ++PD+ YNSL+ G ++ EA L EM + P+ T+ + +
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A + M + GV P+ L++ YC ++ +A + SM +G+ + +Y+++++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
GL KN VD+A +F EM I PD +Y LI+G K G + A + DEM +G
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
+ YN LL C+S ++KA L +M +G+ P+ VTY ++DG CK G L A +F
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
++ +KG Y +++G C+ + A+ + KGC F +I +F+
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKF 779
Query: 482 GDNYKAEKLLREMM 495
G ++L +M
Sbjct: 780 GKTELKTEVLNRLM 793
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 215/423 (50%)
Query: 77 KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRA 136
KG P T LI GLC + A ++ + G L+ +Y LI GL + A
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
+ L+ ++ H + MY+ I + K+ ++ A LF M+ + P Y SL+
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
G+C +++ ELL EM ++NI T+ T+V + G++ A N++ M+ G +P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
++ Y +L+ + + A+ +L M ++G+ P++ Y+ +I GL K K +DEA +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
EM + P+ TY + I G ++ + A + V EM G +K L++ CK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
V +A + + M DQGI D TY +LM+GL K ++ +A+E+F+++ KG V +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
++ING K G +A ++ EM ++G P+ I + ++ G+ KA++LL EM
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 497 RGL 499
+GL
Sbjct: 691 KGL 693
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 207/486 (42%), Gaps = 26/486 (5%)
Query: 18 NFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKK 77
N+PV S + +DD + +F L I G I A V +
Sbjct: 127 NWPVAEVWSSIVRCSQEFVGKSDDGV-LFGILF-----DGYIAKGYIEEAVFVFSSSMGL 180
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
P L+ L + + +V R + +Y LI CR G +
Sbjct: 181 ELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLG 240
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+L + E + V A L M+ K + P TY+ L+ G
Sbjct: 241 KDVLFKTEKEFRTATLN--------------VDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
C + +L++A LL EM + D T++ L+D L K N AK ++ M+ G+
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 258 LFTYNSLMDGYCLVNE---INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN 314
+ Y+ + C++++ + KA A+ + M G+ P +Y+ +I G C+ K V +
Sbjct: 347 PYMYDCCI---CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC 374
L EM+ I+ TY +++ G+C SG + A+ +V EM G + Y +L+
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
++ A+ + K+M++QGI PD+ YN L+ GL K R+ A+ ++V G
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
TY I+G + F A + EM + G +P+ + +I +KG +A R M
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 495 MARGLL 500
+ +G+L
Sbjct: 584 VDQGIL 589
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 211/461 (45%), Gaps = 37/461 (8%)
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS 120
FG A SV+ +++++ + P A +++++ C + V ++ DD V
Sbjct: 110 FGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQEFVGKS----DD---------GVL 153
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+G L G G ++ + G + P + ++D+L + + ++++ MV
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLK---------------------EATELLDEMTRKNI 219
+ V DV TY+ L+ C G ++ A +L + M K +
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
P T++ L+D L K +++AK++L M GV D TY+ L+DG + A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+++ M G+ + Y I + K ++++A LF M +IP Y+SLI+G C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
+ + +EL+ EM + +TY +++ +C S +D A + K+M G +P+VV
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
Y L+ + R +A V +++ +G + YN +I GL K DEA + L EM
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+ G P+A T+ I E + A+K ++EM G+L
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 145/322 (45%), Gaps = 53/322 (16%)
Query: 36 IHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVT 85
+ N A SIF+ ++ TP++I + G+I A +L ++ KG P+AVT
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM-------------- 131
T+I G C G++ A + D++ +G + Y TL+ G CR+
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759
Query: 132 --------------------GQTRASLQLL-RQVEG---HLVKPNVVMYNTIIDSLCKDK 167
G+T ++L R ++G KPN V YN +ID LCK+
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFN 227
+ A LF +M + P V+TY SLL G+ +G+ E + DE I PD I ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQ-----GVKPDLFTYNSLMDGYCLVNEINKAIAILN 282
+++A KEG +A ++ M + G K + T +L+ G+ V E+ A ++
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Query: 283 SMAQRGVTPNVHSYSIIIHGLC 304
+M + P+ + +I+ C
Sbjct: 940 NMVRLQYIPDSATVIELINESC 961
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 238/464 (51%), Gaps = 29/464 (6%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD------------ 107
E G A+ L +++K G PD V+ TLI G C G RA D
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232
Query: 108 ----------------DVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
D+V GF + V++ ++I LC+ G+ LLR++E V P
Sbjct: 233 LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 292
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
N V Y T++DSL K + A L+S+MVV+ + D+V Y L+ G G L+EA +
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+ N P+V+T+ LVD L K G++ A+ ++ M+++ V P++ TY+S+++GY
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKK 412
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ +A+++L M + V PN +Y +I GL K + A+ L EM I + +
Sbjct: 413 GMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYIL 472
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+L++ L + GRI LV +M +KG D+ Y SL+DV K + A+A ++M++
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE 532
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+G+ DVV+YN+L+ G+ K G++ A ++ + KG + T+NIM+N K+G +
Sbjct: 533 RGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEG 591
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
L L +M+ G P ++ ++ L E G +A +L +MM
Sbjct: 592 ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 203/382 (53%), Gaps = 32/382 (8%)
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNL-FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
V P+ ++N++I + LV D +L +S+M+ VSPDV N L++ FC VG+L A
Sbjct: 89 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
LL + I D +T+NT++ L + G EA L+ M+K G+ PD +YN+L+DG
Sbjct: 149 ISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 205
Query: 268 YCLVNEINKAIAILNS----------------------------MAQRGVTPNVHSYSII 299
+C V +A A+++ M G P+V ++S I
Sbjct: 206 FCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSI 265
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I+ LCK V E L EME + + P+ +TY++L+D L K+ HA L +M +G
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
P D Y L+D L K+ + +A K + + P+VVTY L+DGLCK G L +A+
Sbjct: 326 PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEF 385
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
+ ++ K V TY+ MING K+G+ +EA++LL +MED+ +P+ T+ T+I LF
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 480 EKGDNYKAEKLLREMMARGLLE 501
+ G A +L +EM G+ E
Sbjct: 446 KAGKEEMAIELSKEMRLIGVEE 467
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 226/451 (50%), Gaps = 32/451 (7%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQF-HDDVVARGFRLNQVSYGTLIKGLCRMGQTRA 136
G PD+ +LI + G V + + ++A G + + LI C++G+
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
++ LLR ++ + V YNT+I LC+ L +A+ SEMV + PD V+YN+L+
Sbjct: 148 AISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 197 GFCIVGQLKEATELLDEMTRKNI----------------------------GPDVITFNT 228
GFC VG A L+DE++ N+ PDV+TF++
Sbjct: 205 GFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSS 264
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
+++ L K G V E +L M + V P+ TY +L+D N A+A+ + M RG
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 324
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+ ++ Y++++ GL K + EA F + +P+ +TY++L+DGLCK+G +S A
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
++ +M K + TY+S+++ K +++A++L +KM DQ + P+ TY ++DGL
Sbjct: 385 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 444
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
K G+ + A E+ +++ + G + ++N L + G E L+ +M KG D
Sbjct: 445 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504
Query: 469 ITFETIICALFEKGDNYKAEKLLREMMARGL 499
I + ++I F+ GD A EM RG+
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 232/472 (49%), Gaps = 11/472 (2%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+A F LL + P+++ + G + SA ++ ++L+K P+ VT +++I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
G KG + A+ + + N +YGT+I GL + G+ +++L +++ V+
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
N + + +++ L + + + L +MV K V+ D + Y SL+ F G + A
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 526
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+EM + + DV+++N L+ + K G V A M ++G++PD+ T+N +M+
Sbjct: 527 AEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRK 585
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+ + + + M G+ P++ S +I++ LC+N ++EA+++ +M ++I P+ T
Sbjct: 586 QGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 645
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y +D K R ++ + + + G + YN+L+ LCK KA + M
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+G PD VT+N LM G ++ A + ++ G V TYN +I GL GL
Sbjct: 706 ARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIK 765
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
E LSEM+ +G PD T+ +I + G+ + + EM+A GL+ K
Sbjct: 766 EVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPK 817
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 217/467 (46%), Gaps = 22/467 (4%)
Query: 48 RLLGTSPTPSIIE--------FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV 99
RL+G I++ G+I ++ ++ KG D + T+LI G+
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI 159
AL + +++ RG + VSY LI G+ + G+ A + + ++P++ +N +
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIM 579
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
++S K L+ +M + P +++ N ++ C G+++EA +L++M I
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
P++ T+ +D K ++ G+K YN+L+ C + KA
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAM 699
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
++ M RG P+ +++ ++HG V +AL+ ++ M I P+ TY+++I GL
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
+G I + + EM ++G D FTYN+L+ K ++ ++ + +M G+ P
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC------------KEG 447
TYN+L+ G++ A+E+ +++ +G TY MI+GLC K
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAM 879
Query: 448 LFDEALALLSEM-EDKGCIPDAITFETIICALFEKGDNYKAEKLLRE 493
EA LL EM E+KG IP T I A + G AE+ L+E
Sbjct: 880 YLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL-FAEM 319
+++L Y + A L++M GV P+ ++ +IH N +V + ++L +++M
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
+ PD + LI CK GR+S A L + N+ D TYN+++ LC+
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLA 177
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA---------------------- 417
D+A +M GI PD V+YN L+DG CK G A
Sbjct: 178 DEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSY 237
Query: 418 ------QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
+E ++D+V+ G+ V T++ +IN LCK G E LL EME+ P+ +T+
Sbjct: 238 YNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTY 297
Query: 472 ETIICALFEKGDNYKAEKLLREMMARGL 499
T++ +LF+ A L +M+ RG+
Sbjct: 298 TTLVDSLFKANIYRHALALYSQMVVRGI 325
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 208/414 (50%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
PD + +L+ L + A + +D++ RG ++ S L+KG+C G+ +L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
+ G PN+V YNTII CK + +A+ +F E+ +K P + T+ +++ GFC
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
G + LL E+ + + V N ++DA + G + + ++ KPD+ T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
YN L++ C + A+ L+ +++G+ PN SY+ +I CK+K D A L +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
PD +TY LI GL SG + A + ++ ++G D YN L+ LCK+
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
A L +M D+ I PD Y L+DG + G A++VF V KG V V +N MI
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
G C+ G+ DEALA ++ M ++ +PD T+ TII ++ D A K+ R M
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 207/420 (49%), Gaps = 15/420 (3%)
Query: 71 LGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCR 130
+G I+ +PD T LI LC +G+ A+ F D+ +G N +SY LI+ C+
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 131 MGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT 190
+ + +LL Q+ KP++V Y +I L + DA N+ +++ + VSPD
Sbjct: 393 SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
YN L+ G C G+ A L EM +NI PD + TL+D + G+ EA+ V ++ +
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
++GVK D+ +N+++ G+C +++A+A +N M + + P+ +YS II G K + +
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
A+ +F ME K P+ +TY+SLI+G C G A E EM + + TY +L+
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 371 DVLCK-SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE--------------GRLK 415
L K S ++KA+ + M P+ VT+N L+ G K+ G+
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
E F + G+ YN + LC G+ A +M KG PD ++F I+
Sbjct: 693 LFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 213/419 (50%)
Query: 77 KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRA 136
KG P+ V T+I G C G++ A ++ +GF ++GT+I G C+ G A
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
S +LL +V+ ++ +V N IID+ + D ++ PDV TYN L+
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
C G+ + A LDE ++K + P+ +++ L+ A K A +L M ++G KP
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
D+ TY L+ G + ++ A+ + + RGV+P+ Y++++ GLCK A LF
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
+EM I+PD Y++LIDG +SG A ++ KG D +N+++ C+S
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
+D+A+A +M ++ + PD TY+ ++DG K+ + A ++F+ + V TY
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
+ING C +G F A EM+ + +P+ +T+ T+I +L ++ + E+M
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM 652
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 197/413 (47%), Gaps = 17/413 (4%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A +L ++ ++G +PD VT LI GL + G + A+ ++ RG + Y L+
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
GLC+ G+ + L ++ + P+ +Y T+ID + +A +FS V K V
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
DVV +N+++ GFC G L EA ++ M +++ PD T++T++D K+ ++ A +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK- 305
M K KP++ TY SL++G+C + A M R + PNV +Y+ +I L K
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS--------------GRISHAWELV 351
+ +++A+ + M K +P+ +T++ L+ G K G+ S E
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFF 698
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
M + G YNS L LC V A KM +G PD V++ ++ G C
Sbjct: 699 HRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV 758
Query: 412 GRLKNAQEV-FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
G K + + F +L KG V VR Y+ ++ + + EA +L M +K
Sbjct: 759 GNSKQWRNMDFCNLGEKGLEVAVR-YSQVLEQHLPQPVICEASTILHAMVEKA 810
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 163/350 (46%), Gaps = 31/350 (8%)
Query: 30 HSLSPSIHNADDAISIFNRLL--GTSPTPSIIEF--------GQIPSAFSVLGKILKKGY 79
H L S H DDA+++ +L+ G SP +I G+ A + ++L +
Sbjct: 423 HGLVVSGH-MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 80 RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQ 139
PDA TLI G G+ A + V +G +++ V + +IKG CR G +L
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541
Query: 140 LL-RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+ R E HLV P+ Y+TIID K + ++ A +F M K P+VVTY SL+ GF
Sbjct: 542 CMNRMNEEHLV-PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE-AKNVLAVMMKQGVKPD 257
C G K A E EM +++ P+V+T+ TL+ +L KE + E A +MM P+
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660
Query: 258 LFTYNSLMDGYCLVNEINKAIA---------------ILNSMAQRGVTPNVHSYSIIIHG 302
T+N L+ G+ + K +A + M G + + +Y+ +
Sbjct: 661 EVTFNCLLQGF-VKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVC 719
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
LC + MV A +M PD +++++++ G C G S W +D
Sbjct: 720 LCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN-SKQWRNMD 768
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 240/480 (50%), Gaps = 11/480 (2%)
Query: 23 SKPSFHSHSLSPSIHNADD---AISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGY 79
S+PS SH L ++ + +I +F+ L+ +E G A V ++
Sbjct: 109 SEPSNMSHRLFNALEDIQSPKFSIGVFSLLI-----MEFLEMGLFEEALWVSREM---KC 160
Query: 80 RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQ 139
PD+ +++ GL + + +++RG + Y L + + G +
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
LL ++ +KPNV +Y I LC+D + +A +F M V P++ TY++++ G+C
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
G +++A L E+ + P+V+ F TLVD K + A+++ M+K GV P+L+
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
YN L+ G+C + +A+ +L+ M ++P+V +Y+I+I+GLC V EA LF +M
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
+ +I P + TY+SLI G CK + A +L EM G + T+++L+D C +
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
A+ L +M +GI PDVVTY L+D KE +K A ++ D++ G H T+ +
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
++G KEG A+ E + + + F +I L + G +A + +M + G+
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 204/416 (49%), Gaps = 2/416 (0%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
+L ++ G +P+ T I LC ++ A + + + G N +Y +I G C
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ G R + L +++ + PNVV++ T++D CK + + A +LF MV V P++
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
YN L++G C G + EA LL EM N+ PDV T+ L++ L E V EA + M
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
+ + P TYNSL+ GYC + +A+ + + M GV PN+ ++S +I G C + +
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
A+ L+ EM I+PD +TY++LID K + A L +M G + T+ L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
+D K + AI ++ Q + V + L++GLC+ G + A F D+ G
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY 485
+ +Y M+ G +E + + L +M G +P+ + + + A F + + Y
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLL--ARFYQANGY 634
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 180/356 (50%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G + A+ + +IL P+ V TL+ G C E+ A +V G N Y
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI G C+ G ++ LL ++E + P+V Y +I+ LC + V++A LF +M
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+++ P TYNSL++G+C +++A +L EMT + P++ITF+TL+D ++K
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A + M +G+ PD+ TY +L+D + + +A+ + + M + G+ PN H+++ ++
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
G K + A++ + E + + + ++ LI+GLC++G I A +M + G
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
D +Y S+L + + + L M GI P+++ +L G +K+A
Sbjct: 583 DICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 175/351 (49%), Gaps = 3/351 (0%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
K ++ +++ +I + L +A + EM K SPD S+L G +
Sbjct: 129 KFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWV 185
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
M + + PDV + L K+G + + +L M G+KP+++ Y + C
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC 245
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
N++ +A + M + GV PN+++YS +I G CK V +A L+ E+ +++P+ +
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+ +L+DG CK+ + A L M G + + YN L+ CKS ++ +A+ L +M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ PDV TY IL++GLC E ++ A +FQ + + + TYN +I+G CKE
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
++AL L SEM G P+ ITF T+I D A L EM +G++
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 156/337 (46%), Gaps = 45/337 (13%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEFGQIPSAF----------SVLGKILKKGYRPDAVTLT 87
N A ++ +L P+++ FG + F S+ ++K G P+
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
LI G C G + A+ ++ + + +Y LI GLC Q + +L ++++
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
+ P+ YN++I CK+ + A +L SEM V P+++T+++L+ G+C V +K A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
L EMT K I PDV+T+ L+DA KE N+KEA + + M++ G+ P+ T+ L+DG
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 268 Y-----------------------------CLVN------EINKAIAILNSMAQRGVTPN 292
+ CL+ I +A + M G+TP+
Sbjct: 524 FWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPD 583
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ SY ++ G + K + + + L +M I+P+ +
Sbjct: 584 ICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 233/504 (46%), Gaps = 44/504 (8%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI---------LKKGYRPDAVTLTTLI 90
D+A S+ R PS+I + I + +GK+ +KK P+ T LI
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILI 384
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
LC G++ A + D + G N + ++ LC+ + + + +++ +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P+ + + ++ID L K V DA+ ++ +M+ + + Y SL+ F G+ ++ ++
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGN-------------------------------- 238
+M +N PD+ NT +D + K G
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 239 ---VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
E + M +QG D YN ++DG+C ++NKA +L M +G P V +
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y +I GL K +DEA LF E + +I + + YSSLIDG K GRI A+ +++E+
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
KG + +T+NSLLD L K+ +++A+ + M++ P+ VTY IL++GLCK +
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A +Q++ +G + +Y MI+GL K G EA AL + G +PD+ + +I
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 476 CALFEKGDNYKAEKLLREMMARGL 499
L A L E RGL
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGL 828
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 234/470 (49%), Gaps = 11/470 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTL 89
D+A+ +F L P + G+ A+S+L + KG P + +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ L G+V AL+ +++ + N +Y LI LCR G+ + +L ++ +
Sbjct: 350 LTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
PNV N ++D LCK + + +A +F EM K +PD +T+ SL+ G VG++ +A +
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
+ ++M + + I + +L+ G ++ + M+ Q PDL N+ MD
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
E K A+ + R P+ SYSI+IHGL K +E LF M+ + DT
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
Y+ +IDG CK G+++ A++L++EM KG TY S++D L K +D+A L ++
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ + I+ +VV Y+ L+DG K GR+ A + ++L+ KG + T+N +++ L K
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+EAL M++ C P+ +T+ +I L + KA +EM +G+
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 223/476 (46%), Gaps = 36/476 (7%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
++ ++ + V+ + K +RP TTLI L + G+
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ TLI+G + G+ ++L LL +++ + ++V+YN IDS K V A+ F E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 179 MVVKKVSPDVVT-----------------------------------YNSLLYGFCIVGQ 203
+ + PD VT YN+++ G+ G+
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
EA LL+ K P VI +N ++ L K G V EA V MK+ P+L TYN
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE-EMKKDAAPNLSTYNI 382
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
L+D C +++ A + +SM + G+ PNV + +I++ LCK++ +DEA +F EM+
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
PD IT+ SLIDGL K GR+ A+++ ++M + + Y SL+ +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
+ K M +Q PD+ N MD + K G + + +F+++ + + R+Y+I+I+GL
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 444 CKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
K G +E L M+++GC+ D + +I + G KA +LL EM +G
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 195/392 (49%), Gaps = 10/392 (2%)
Query: 36 IHNADDAISIFNRLLG----------TSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVT 85
+ DDA ++ ++L TS + G+ + ++ + PD
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
L T + + GE + +++ AR F + SY LI GL + G + +L ++
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
+ YN +ID CK V+ A+ L EM K P VVTY S++ G + +L
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
EA L +E K I +V+ +++L+D GK G + EA +L +M++G+ P+L+T+NSL+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
D EIN+A+ SM + TPN +Y I+I+GLCK + ++A + EM+ +
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
P TI+Y+++I GL K+G I+ A L D G D YN++++ L + A +L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
++ R +G+ T +L+D L K L+ A
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 209/428 (48%), Gaps = 1/428 (0%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
+LG++ G+ P T ++ G ++R + FR +Y TLI
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ + L L +Q++ +P V ++ T+I K+ V A +L EM + D+V
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
YN + F VG++ A + E+ + PD +T+ +++ L K + EA + +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
K P + YN+++ GY + ++A ++L +G P+V +Y+ I+ L K V
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
DEAL +F EM+ P+ TY+ LID LC++G++ A+EL D M G + T N +
Sbjct: 360 DEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
+D LCKS +D+A A+ ++M + PD +T+ L+DGL K GR+ +A +V++ ++
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEK 489
Y +I G ++ + +M ++ C PD T + +F+ G+ K
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 490 LLREMMAR 497
+ E+ AR
Sbjct: 539 MFEEIKAR 546
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 223/455 (49%), Gaps = 11/455 (2%)
Query: 19 FPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAF 68
FP V + L S D+A ++F + TP I F G++ A+
Sbjct: 409 FPNVRTVNIMVDRLCKS-QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 69 SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
V K+L R +++ T+LIK G + + D++ + + T + +
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV 188
+ G+ + +++ P+ Y+ +I L K ++ + LF M + D
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
YN ++ GFC G++ +A +LL+EM K P V+T+ +++D L K + EA +
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
+ ++ ++ Y+SL+DG+ V I++A IL + Q+G+TPN+++++ ++ L K +
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
++EAL F M+ +K P+ +TY LI+GLCK + + A+ EM +G +Y +
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
++ L K+ ++ +A AL + + G PD YN +++GL R +A +F++ +G
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
+ +T ++++ L K ++A + + + + G
Sbjct: 828 LPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 183/376 (48%), Gaps = 5/376 (1%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
SY +L+ + R A Q+L ++ P+V ++ K + + +++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
K P Y +L+ F V L +M P V F TL+ KEG V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
A ++L M + D+ YN +D + V +++ A + + G+ P+ +Y+ +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I LCK +DEA+ +F +E + +P T Y+++I G +G+ A+ L++ KG
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
YN +L L K VD+A+ + ++M+ P++ TYNIL+D LC+ G+L A E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFE 398
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
+ + G VRT NIM++ LCK DEA A+ EM+ K C PD ITF ++I L
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 480 EKG---DNYKA-EKLL 491
+ G D YK EK+L
Sbjct: 459 KVGRVDDAYKVYEKML 474
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 247/514 (48%), Gaps = 55/514 (10%)
Query: 41 DAISIFNRLLG----TSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTL 86
D I + +RLL P P+++ F G++ AF + + ++G PD +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
+TLI G G + + + +G +L+ V + + I + G + + +++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
+ PNVV Y +I LC+D + +AF ++ +++ + + P +VTY+SL+ GFC G L+
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
L ++M + PDV+ + LVD L K+G + A M+ Q ++ ++ +NSL+D
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYS----------------------------- 297
G+C +N ++A+ + M G+ P+V +++
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ 564
Query: 298 ------------IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
++IH L K +++A F + K+ PD +TY+++I G C R+
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
A + + + + T L+ VLCK++ +D AI + M ++G +P+ VTY LM
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
D K ++ + ++F+++ KG ++ +Y+I+I+GLCK G DEA + + D +
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
PD + + +I + G +A L M+ G+
Sbjct: 745 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 207/415 (49%), Gaps = 6/415 (1%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
++ G + +A V ++L +G P+ VT T LIKGLC G + A + ++ RG +
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
V+Y +LI G C+ G R+ L + P+VV+Y ++D L K L+ A +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV------DA 232
M+ + + +VV +NSL+ G+C + + EA ++ M I PDV TF T++ DA
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
K + +M + + D+ N ++ + I A N++ + + P+
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ +Y+ +I G C + +DEA +F ++ P+T+T + LI LCK+ + A +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M KG + TY L+D KS ++ + L ++M+++GI P +V+Y+I++DGLCK G
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
R+ A +F + V Y I+I G CK G EA L M G PD
Sbjct: 727 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 206/412 (50%), Gaps = 8/412 (1%)
Query: 73 KILKKGYRPDAVTLTTLI-KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM 131
K+ + G P V+ + L KGEV +AL FH V+ RGFR+ VS ++KGL +
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SV 264
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
Q + +LL V PNVV + T+I+ CK + AF+LF M + + PD++ Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
++L+ G+ G L +L + K + DV+ F++ +D K G++ A V M+
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
QG+ P++ TY L+ G C I +A + + +RG+ P++ +YS +I G CK +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
L+ +M + PD + Y L+DGL K G + HA +M + + +NSL+D
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM------DGLCKEGRLKNAQEVFQDLV 425
C+ + D+A+ + + M GI+PDV T+ +M D CK + ++F +
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ 564
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+ N++I+ L K ++A + + + PD +T+ T+IC
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 189/380 (49%), Gaps = 51/380 (13%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+A ++ ++L PSI+ + G + S F++ ++K GY PD V L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
GL +G + A++F ++ + RLN V + +LI G CR+ + +L++ R + + +K
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 151 PNVVMYNTII------DSLCK----------------DKL-------------------V 169
P+V + T++ D+ CK +K+ +
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 588
Query: 170 SDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTL 229
DA F+ ++ K+ PD+VTYN+++ G+C + +L EA + + + GP+ +T L
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+ L K ++ A + ++M ++G KP+ TY LMD + +I + + M ++G+
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
+P++ SYSIII GLCK VDEA N+F + K++PD + Y+ LI G CK GR+ A
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 768
Query: 350 LVDEMHNKGQPADKFTYNSL 369
L + M G D +L
Sbjct: 769 LYEHMLRNGVKPDDLLQRAL 788
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 158/290 (54%), Gaps = 2/290 (0%)
Query: 211 LDEMTRKNIGPDVITFNTLV-DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
D++ R I P ++ + V DAL +G V +A + ++M++G + + + N ++ G
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
V++I A +L+ + G PNV ++ +I+G CK +D A +LF ME I PD I
Sbjct: 264 -VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
YS+LIDG K+G + +L + +KG D ++S +DV KS + A + K+M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
QGI P+VVTY IL+ GLC++GR+ A ++ ++ +G ++ TY+ +I+G CK G
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
AL +M G PD + + ++ L ++G A + +M+ + +
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 225/459 (49%), Gaps = 37/459 (8%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
+K Y + +L+ L L +V R ++ F + + LIK ++G
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVE 204
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
L + R+++ + ++P + YN +++ L V A +F M ++ PD+VTYN+++
Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMI 264
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA----------------------- 232
G+C GQ ++A E L +M + D IT+ T++ A
Sbjct: 265 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
Query: 233 ------------LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI 280
L KEG + E V M+++G KP++ Y L+DGY + AI +
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 281 LNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
L+ M G P+V +YS++++GLCKN V+EAL+ F + +++ YSSLIDGL K
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM-RDQGIQPDVV 399
+GR+ A L +EM KG D + YN+L+D K VD+AIAL K+M ++G V
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY 504
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
TY IL+ G+ KE R + A +++ ++ KG T + + GLC G A +L E+
Sbjct: 505 TYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDEL 564
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
G I DA E +I L + G +A KL + RG
Sbjct: 565 APMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERG 602
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 200/442 (45%), Gaps = 77/442 (17%)
Query: 80 RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK------------- 126
+PD VT T+IKG C G+ ++A++ D+ RG ++++Y T+I+
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 127 ----------------------GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
GLC+ G+ + + KPNV +Y +ID
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
K V DA L M+ + PDVVTY+ ++ G C G+++EA + + + +
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
+++L+D LGK G V EA+ + M ++G D + YN+L+D + ++++AIA+ M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 285 -AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
+ G V++Y+I++ G+ K +EAL L+ M I P + +L GLC SG+
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
++ A +++DE+ G +LD C+
Sbjct: 554 VARACKILDELAPMG---------VILDAACED--------------------------- 577
Query: 404 LMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE----- 458
+++ LCK GR+K A ++ + +G V R +MIN L K G D A+ L+
Sbjct: 578 MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
Query: 459 MEDKGCIPDAITFETIICALFE 480
E G + + F T++ F+
Sbjct: 638 YERMGSVKRRVKFTTLLETCFD 659
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 117/279 (41%), Gaps = 27/279 (9%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKG 97
+ +DAI + +R+ + +G++PD VT + ++ GLC G
Sbjct: 377 SVEDAIRLLHRM-------------------------IDEGFKPDVVTYSVVVNGLCKNG 411
Query: 98 EVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYN 157
V AL + G +N + Y +LI GL + G+ + +L ++ + YN
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 158 TIIDSLCKDKLVSDAFNLFSEMVVKK-VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
+ID+ K + V +A LF M ++ V TY LL G + +EA +L D M
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMID 531
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
K I P F L L G V A +L + GV D +++ C I +
Sbjct: 532 KGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKE 590
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
A + + + +RG +++I+ L K D A+ L
Sbjct: 591 ACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
S Q+ T N+ Y ++ L K VD + +E++ + ++LI K G
Sbjct: 142 SRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLG 201
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
+ + +M G +TYN L++ L + VD A + + M I+PD+VTYN
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 261
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
++ G CK G+ + A E +D+ +G+ TY MI + F +AL EM++K
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 321
Query: 463 GCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
G F +I L ++G + + M+ +G
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 221/444 (49%), Gaps = 1/444 (0%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+I+ G + A K+ + P + L+ G+ +F D++ G R
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
+Y +I +C+ G A+ L +++ + P+ V YN++ID K + D F
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM PDV+TYN+L+ FC G+L E EM + P+V++++TLVDA KEG
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+++A M + G+ P+ +TY SL+D C + ++ A + N M Q GV NV +Y+
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
+I GLC + + EA LF +M+ +IP+ +Y++LI G K+ + A EL++E+ +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 358 GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
G D Y + + LC ++ A + +M++ GI+ + + Y LMD K G
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME-DKGCIPDAITFETIIC 476
+ ++ VTV T+ ++I+GLCK L +A+ + + D G +A F +I
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 477 ALFEKGDNYKAEKLLREMMARGLL 500
L + A L +M+ +GL+
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLV 645
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 253/545 (46%), Gaps = 47/545 (8%)
Query: 2 MLSSPRVSMSSFLRLNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF 61
ML S R FP + H + + DD F ++G P++ +
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA-KLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 62 ----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA 111
G + +A + ++ +G PD VT ++I G G + + F +++
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
+ ++Y LI C+ G+ L+ R+++G+ +KPNVV Y+T++D+ CK+ ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A + +M + P+ TY SL+ C +G L +A L +EM + + +V+T+ L+D
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
L +KEA+ + M GV P+L +YN+L+ G+ +++A+ +LN + RG+ P
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 292 NVHSYSIIIHGLCK-----------NKMVD------------------------EALNLF 316
++ Y I GLC N+M + E L+L
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK-GQPADKFTYNSLLDVLCK 375
EM+ + I +T+ LIDGLCK+ +S A + + + N G A+ + +++D LCK
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
+ V+ A L ++M +G+ PD Y LMDG K+G + A + + G + +
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
Y ++ GL +A + L EM +G PD + +++ +E G +A +L +M
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLM 745
Query: 496 ARGLL 500
LL
Sbjct: 746 KHQLL 750
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 239/522 (45%), Gaps = 37/522 (7%)
Query: 6 PRVSMSSFLRLNNFPVVSKPSFHSHS-------LSPSIHN--ADDA--ISIFNRLLGTSP 54
P V +SFL + +P V+K ++S + +HN DD +F+ L
Sbjct: 51 PFVWFTSFLCIIRYPFVTKSGTSTYSEDFDRDWIRKVVHNDLWDDPGLEKLFDLTLAPIW 110
Query: 55 TPSI-IEFGQIPS-AFSVL-GKILKKGYRPDAVTL----------------TTLIKGLCL 95
P + +E + P AF + + G++ + +++K + L
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170
Query: 96 KG---EVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN 152
+V L +V GF + + LI +G ++Q +++ V P
Sbjct: 171 SKADCDVFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPK 226
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
N ++ K D F +M+ P V TYN ++ C G ++ A L +
Sbjct: 227 TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 286
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
EM + + PD +T+N+++D GK G + + M +PD+ TYN+L++ +C
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
++ + M G+ PNV SYS ++ CK M+ +A+ + +M + ++P+ TY+
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
SLID CK G +S A+ L +EM G + TY +L+D LC + + +A L KM
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
G+ P++ +YN L+ G K + A E+ +L +G + Y I GLC + A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+++EM++ G +++ + T++ A F+ G+ + LL EM
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 180/349 (51%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P +++ + L ++ +A FS+M +V P + N LL+ F +G+ +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+M P V T+N ++D + KEG+V+ A+ + M +G+ PD TYNS++DG+
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
V ++ + M P+V +Y+ +I+ CK + L + EM+ + P+ ++
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
YS+L+D CK G + A + +M G +++TY SL+D CK ++ A L +M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
G++ +VVTY L+DGLC R+K A+E+F + G + +YN +I+G K D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
AL LL+E++ +G PD + + T I L A+ ++ EM G+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 164/351 (46%), Gaps = 20/351 (5%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
K +V Y + L ++ DA ++ EMV+ K DV +L+
Sbjct: 139 KHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVF---DVLWS------------ 183
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
TR P F+ L L G ++EA + M + V P + N L+ +
Sbjct: 184 -----TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA 238
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ + + M G P V +Y+I+I +CK V+ A LF EM+ ++PDT+
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+S+IDG K GR+ +EM + D TYN+L++ CK + + ++M
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ G++P+VV+Y+ L+D CKEG ++ A + + D+ G TY +I+ CK G
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+A L +EM G + +T+ +I L + +AE+L +M G++
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 208/384 (54%), Gaps = 1/384 (0%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
N+ +Y T++ GLCR + ++ LR E + P+VV +N+I+ CK V A + F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
++ + P V ++N L+ G C+VG + EA EL +M + + PD +T+N L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN-VHS 295
G + A V+ M+ +G+ PD+ TY L+ G C + I+ + +L M RG N +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
S+++ GLCK +DEAL+LF +M+ + PD + YS +I GLCK G+ A L DEM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
+K + T+ +LL LC+ + +A +L + G D+V YNI++DG K G ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A E+F+ ++ G +V T+N +I G CK EA +L ++ G P +++ T++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 476 CALFEKGDNYKAEKLLREMMARGL 499
A G+ ++L REM A G+
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGI 569
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 219/441 (49%), Gaps = 54/441 (12%)
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV- 119
G I A+ V+ +L KG PD +T T L+ G C G + L D+++RGF LN +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++ GLC+ G+ +L L Q++ + P++V Y+ +I LCK A L+ EM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
K++ P+ T+ +LL G C G L EA LLD + D++ +N ++D K G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+EA + V+++ G+ P + T+NSL+ GYC I +A IL+ + G+ P+V SY+ +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 300 I--HGLCKN-KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE--- 353
+ + C N K +DE L EM+ I P +TYS + GLC+ + + ++ E
Sbjct: 545 MDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 354 ---------MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
M ++G P D+ TYN+++ LC+ H+ A + M+ + + TYNIL
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 405 MDGLCKEGRLKNAQ-----------------------------------EVFQDLVIKGY 429
+D LC G ++ A ++F L+ +G+
Sbjct: 662 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 430 HVTVRTYNIMINGLCKEGLFD 450
+V++R Y+ +IN LC+ L +
Sbjct: 722 NVSIRDYSAVINRLCRRHLMN 742
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 235/483 (48%), Gaps = 23/483 (4%)
Query: 40 DDAISIFNRLLGTSPTPSIIE----------FGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
D A S F +L PS+ G I A + + K G PD+VT L
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
KG L G + A + D++ +G + ++Y L+ G C++G L LL+ +
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 150 KPN-VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
+ N ++ + ++ LCK + +A +LF++M +SPD+V Y+ +++G C +G+ A
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
L DEM K I P+ T L+ L ++G + EA+++L ++ G D+ YN ++DGY
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
I +A+ + + + G+TP+V +++ +I+G CK + + EA + ++ + P
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS------HHV--- 379
++Y++L+D G EL EM +G P TY+ + LC+ +HV
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 380 ---DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
+K + M +GI PD +TYN ++ LC+ L A + + + + TY
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
NI+I+ LC G +A + + ++++ + T+I A KGD A KL +++
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 497 RGL 499
RG
Sbjct: 719 RGF 721
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 216/462 (46%), Gaps = 23/462 (4%)
Query: 56 PSIIEFGQIPSAFSVLG----------KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF 105
PS++ F I S + LG +LK G P + LI GLCL G + AL+
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 106 HDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK 165
D+ G + V+Y L KG +G + +++R + + P+V+ Y ++ C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 166 DKLVSDAFNLFSEMVVKKVSPD-VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
+ L +M+ + + ++ + +L G C G++ EA L ++M + PD++
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
++ ++ L K G A + M + + P+ T+ +L+ G C + +A ++L+S+
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
G T ++ Y+I+I G K+ ++EAL LF + I P T++SLI G CK+ I
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
+ A +++D + G +Y +L+D + L ++M+ +GI P VTY+++
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVR------------TYNIMINGLCKEGLFDEA 452
GLC+ + +N V ++ + + +R TYN +I LC+ A
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
L M+ + + T+ +I +L G KA+ + +
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 187/399 (46%), Gaps = 58/399 (14%)
Query: 114 FRLNQVSYGTLIKGLCRMGQTRAS-----LQLLRQVEGHLVKPNV--VMYNTIIDSLCKD 166
+ S+ TL+ GQ R L+ L Q EG K ++++ ++ +
Sbjct: 78 YAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRL 137
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF 226
++V D+ + +M + ++ +YNS+LY F +E ++ D
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWDV------------- 178
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
KE K+ + TY++++DG C ++ A+ L +
Sbjct: 179 ------------YKEIKD-----------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW 215
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
+ + P+V S++ I+ G CK VD A + F + ++P +++ LI+GLC G I+
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHH----VDKAIALTKKMRDQGIQPDVVTYN 402
A EL +M+ G D TYN +L K H + A + + M D+G+ PDV+TY
Sbjct: 276 ALELASDMNKHGVEPDSVTYN----ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHV-TVRTYNIMINGLCKEGLFDEALALLSEMED 461
IL+ G C+ G + + +D++ +G+ + ++ ++M++GLCK G DEAL+L ++M+
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
G PD + + +I L + G A L EM + +L
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 208/384 (54%), Gaps = 1/384 (0%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
N+ +Y T++ GLCR + ++ LR E + P+VV +N+I+ CK V A + F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
++ + P V ++N L+ G C+VG + EA EL +M + + PD +T+N L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN-VHS 295
G + A V+ M+ +G+ PD+ TY L+ G C + I+ + +L M RG N +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
S+++ GLCK +DEAL+LF +M+ + PD + YS +I GLCK G+ A L DEM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
+K + T+ +LL LC+ + +A +L + G D+V YNI++DG K G ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A E+F+ ++ G +V T+N +I G CK EA +L ++ G P +++ T++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 476 CALFEKGDNYKAEKLLREMMARGL 499
A G+ ++L REM A G+
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGI 569
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 219/441 (49%), Gaps = 54/441 (12%)
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV- 119
G I A+ V+ +L KG PD +T T L+ G C G + L D+++RGF LN +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++ GLC+ G+ +L L Q++ + P++V Y+ +I LCK A L+ EM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
K++ P+ T+ +LL G C G L EA LLD + D++ +N ++D K G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+EA + V+++ G+ P + T+NSL+ GYC I +A IL+ + G+ P+V SY+ +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 300 I--HGLCKN-KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE--- 353
+ + C N K +DE L EM+ I P +TYS + GLC+ + + ++ E
Sbjct: 545 MDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 354 ---------MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
M ++G P D+ TYN+++ LC+ H+ A + M+ + + TYNIL
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 405 MDGLCKEGRLKNAQ-----------------------------------EVFQDLVIKGY 429
+D LC G ++ A ++F L+ +G+
Sbjct: 662 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 430 HVTVRTYNIMINGLCKEGLFD 450
+V++R Y+ +IN LC+ L +
Sbjct: 722 NVSIRDYSAVINRLCRRHLMN 742
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 235/483 (48%), Gaps = 23/483 (4%)
Query: 40 DDAISIFNRLLGTSPTPSIIE----------FGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
D A S F +L PS+ G I A + + K G PD+VT L
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
KG L G + A + D++ +G + ++Y L+ G C++G L LL+ +
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 150 KPN-VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
+ N ++ + ++ LCK + +A +LF++M +SPD+V Y+ +++G C +G+ A
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
L DEM K I P+ T L+ L ++G + EA+++L ++ G D+ YN ++DGY
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
I +A+ + + + G+TP+V +++ +I+G CK + + EA + ++ + P
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS------HHV--- 379
++Y++L+D G EL EM +G P TY+ + LC+ +HV
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 380 ---DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
+K + M +GI PD +TYN ++ LC+ L A + + + + TY
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
NI+I+ LC G +A + + ++++ + T+I A KGD A KL +++
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 497 RGL 499
RG
Sbjct: 719 RGF 721
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 218/467 (46%), Gaps = 23/467 (4%)
Query: 56 PSIIEFGQIPSAFSVLG----------KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF 105
PS++ F I S + LG +LK G P + LI GLCL G + AL+
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 106 HDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK 165
D+ G + V+Y L KG +G + +++R + + P+V+ Y ++ C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 166 DKLVSDAFNLFSEMVVKKVSPD-VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
+ L +M+ + + ++ + +L G C G++ EA L ++M + PD++
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
++ ++ L K G A + M + + P+ T+ +L+ G C + +A ++L+S+
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
G T ++ Y+I+I G K+ ++EAL LF + I P T++SLI G CK+ I
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
+ A +++D + G +Y +L+D + L ++M+ +GI P VTY+++
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVR------------TYNIMINGLCKEGLFDEA 452
GLC+ + +N V ++ + + +R TYN +I LC+ A
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
L M+ + + T+ +I +L G KA+ + + + +
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 187/399 (46%), Gaps = 58/399 (14%)
Query: 114 FRLNQVSYGTLIKGLCRMGQTRAS-----LQLLRQVEGHLVKPNV--VMYNTIIDSLCKD 166
+ S+ TL+ GQ R L+ L Q EG K ++++ ++ +
Sbjct: 78 YAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRL 137
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF 226
++V D+ + +M + ++ +YNS+LY F +E ++ D
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWDVY------------ 179
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
KE K+ + TY++++DG C ++ A+ L +
Sbjct: 180 -------------KEIKD-----------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW 215
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
+ + P+V S++ I+ G CK VD A + F + ++P +++ LI+GLC G I+
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHH----VDKAIALTKKMRDQGIQPDVVTYN 402
A EL +M+ G D TYN +L K H + A + + M D+G+ PDV+TY
Sbjct: 276 ALELASDMNKHGVEPDSVTYN----ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHV-TVRTYNIMINGLCKEGLFDEALALLSEMED 461
IL+ G C+ G + + +D++ +G+ + ++ ++M++GLCK G DEAL+L ++M+
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
G PD + + +I L + G A L EM + +L
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 221/425 (52%), Gaps = 3/425 (0%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
+KG+ P T ++ L + A F+ D+ + N ++ +I LC+ G+ +
Sbjct: 183 EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLK 242
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+ L +E +KP +V YNT++ + A + SEM K PD+ TYN +L
Sbjct: 243 KAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL 302
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
C G+ A+E+L EM + PD +++N L+ G+++ A M+KQG+
Sbjct: 303 SWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P +TYN+L+ G + N+I A ++ + ++G+ + +Y+I+I+G C++ +A L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
EM I P TY+SLI LC+ + A EL +++ KG D N+L+D C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
++D+A +L K+M I PD VTYN LM GLC EG+ + A+E+ ++ +G +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
YN +I+G K+G A + EM G P +T+ ++ L + + AE+LLREM
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 496 ARGLL 500
+ G++
Sbjct: 600 SEGIV 604
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 224/429 (52%), Gaps = 7/429 (1%)
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS 120
+I +A+ + + + + T +I LC +G++++A F + G + V+
Sbjct: 203 LNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVT 262
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
Y TL++G G+ + ++ +++ +P++ YN I+ +C + S+ + EM
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMK 319
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
+ PD V+YN L+ G G L+ A DEM ++ + P T+NTL+ L E ++
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
A+ ++ + ++G+ D TYN L++GYC + KA A+ + M G+ P +Y+ +I
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
+ LC+ EA LF ++ + PD + ++L+DG C G + A+ L+ EM
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
D TYN L+ LC ++A L +M+ +GI+PD ++YN L+ G K+G K+A V
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+++ G++ T+ TYN ++ GL K + A LL EM+ +G +P+ +F C++ E
Sbjct: 560 RDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF----CSVIE 615
Query: 481 KGDNYKAEK 489
N A+K
Sbjct: 616 AMSNLDAKK 624
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 213/428 (49%), Gaps = 35/428 (8%)
Query: 107 DDVVARGFRLNQVS---YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
D++V RL S + L++ C++ +++ ++ P N I+ L
Sbjct: 141 DELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLL 200
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
+ + +A+ +++M ++ +V T+N ++ C G+LK+A L M I P +
Sbjct: 201 SRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTI 260
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC-------------- 269
+T+NTLV G ++ A+ +++ M +G +PD+ TYN ++ C
Sbjct: 261 VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKE 320
Query: 270 --LV----------------NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
LV ++ A A + M ++G+ P ++Y+ +IHGL ++
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
A L E+ I+ D++TY+ LI+G C+ G A+ L DEM G +FTY SL+
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
VLC+ + +A L +K+ +G++PD+V N LMDG C G + A + +++ + +
Sbjct: 441 VLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP 500
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
TYN ++ GLC EG F+EA L+ EM+ +G PD I++ T+I +KGD A +
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Query: 492 REMMARGL 499
EM++ G
Sbjct: 561 DEMLSLGF 568
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 112/205 (54%), Gaps = 3/205 (1%)
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
+ +++ C+ +MVDEA+ F M+ P T T + ++ L + RI +AW +M+
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
++ +T+N +++VLCK + KA M GI+P +VTYN L+ G GR++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A+ + ++ KG+ ++TYN +++ +C EG A +L EM++ G +PD++++ +I
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILI 334
Query: 476 CALFEKGDNYKAEKLLREMMARGLL 500
GD A EM+ +G++
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMV 359
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 109/208 (52%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+ G AF++ +++ G +P T T+LI LC K + R A + + VV +G + + V
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 468
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
TL+ G C +G + LL++++ + P+ V YN ++ LC + +A L EM
Sbjct: 469 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ + PD ++YN+L+ G+ G K A + DEM P ++T+N L+ L K
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEG 588
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+ A+ +L M +G+ P+ ++ S+++
Sbjct: 589 ELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 350 LVDEM---HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
L DE+ H++ + ++ L+ C+ VD+AI M+++G P T N ++
Sbjct: 139 LFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILT 198
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
L + R++NA + D+ V T+NIMIN LCKEG +A L ME G P
Sbjct: 199 LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP 258
Query: 467 DAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+T+ T++ +G A ++ EM ++G
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 250/475 (52%), Gaps = 22/475 (4%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+ +FNR+ P + F ++ A ++ P +V + T+I+
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 92 GLCLKGEV-RRALQFHDD----VVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
G CLK E AL+ +D +A GF N++ C+ G+ A+ L+ +E
Sbjct: 424 G-CLKAESPEAALEIFNDSFESWIAHGFMCNKI-----FLLFCKQGKVDAATSFLKMMEQ 477
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
++PNVV YN ++ + C+ K + A ++FSEM+ K + P+ TY+ L+ GF +
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG-VKPDLFTYNSLM 265
A +++++M N + + +NT+++ L K G +AK +L ++K+ +YNS++
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
DG+ V + + A+ M++ G +PNV +++ +I+G CK+ +D AL + EM+ +++
Sbjct: 598 DGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELK 657
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
D Y +LIDG CK + A+ L E+ G + YNSL+ +D AI L
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
KKM + GI D+ TY ++DGL K+G + A +++ +L+ G + +++NGL K
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+G F +A +L EM+ K P+ + + T+I +G+ +A +L EM+ +G++
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 247/536 (46%), Gaps = 81/536 (15%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFG-------QIPS---AFSVLGKILKK-GYRPDAVTLTT 88
++A+ IF R++ P + F + P A +L ++ K G T T+
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
+I +G + A++ D++V G ++ ++ +L+ G C+ + +L L ++E
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG----------- 197
+ P+ VM++ +++ CK+ + A + M +++P V ++++ G
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 198 -----------------------FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
FC G++ AT L M +K I P+V+ +N ++ A
Sbjct: 436 EIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
+ N+ A+++ + M+++G++P+ FTY+ L+DG+ + A ++N M N
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
Query: 295 SYSIIIHGLCK---------------------------NKMV---------DEALNLFAE 318
Y+ II+GLCK N ++ D A+ + E
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHH 378
M P+ +T++SLI+G CKS R+ A E+ EM + D Y +L+D CK +
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
+ A L ++ + G+ P+V YN L+ G G++ A ++++ +V G + TY
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
MI+GL K+G + A L SE+ D G +PD I ++ L +KG KA K+L EM
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 222/480 (46%), Gaps = 36/480 (7%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
S++ I A + K++ G D VT L++ + + A++ V++RG
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNL 175
+ + + ++ C+ +L LLR++ G L V + Y ++I + K+ + +A +
Sbjct: 273 DGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV 332
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
EMV + V+ SL+ G+C +L +A +L + M + + PD + F+ +V+ K
Sbjct: 333 MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCK 392
Query: 236 EGNVKEA--------------KNVLAVMMKQGV----KPDL----------------FTY 261
+++A +VL M QG P+ F
Sbjct: 393 NMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC 452
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N + +C +++ A + L M Q+G+ PNV Y+ ++ C+ K +D A ++F+EM
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
+ P+ TYS LIDG K+ +AW+++++M+ A++ YN++++ LCK K
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 382 AIALTKKM-RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
A + + + +++ +YN ++DG K G +A E ++++ G V T+ +I
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
NG CK D AL + EM+ D + +I +K D A L E+ GL+
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 144/277 (51%), Gaps = 1/277 (0%)
Query: 62 GQIPSAFSVLGKILK-KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS 120
GQ A +L ++K K Y + ++I G G+ A++ + ++ G N V+
Sbjct: 568 GQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVT 627
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+ +LI G C+ + +L++ +++ +K ++ Y +ID CK + A+ LFSE+
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
+ P+V YNSL+ GF +G++ A +L +M I D+ T+ T++D L K+GN+
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNIN 747
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
A ++ + ++ G+ PD + L++G + KA +L M ++ VTPNV YS +I
Sbjct: 748 LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG 337
G + ++EA L EM I+ D ++ L+ G
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 35/345 (10%)
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
+N LL + ++ A + M + + P V N ++ +L + + EAK + M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
+ GV D T LM + +A+ I + RG P+ +S+ + CK +
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 310 DEALNLFAEMECIKIIPDTI-TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
AL+L EM +P + TY+S+I K G + A ++DEM G P S
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF---QDLV 425
L++ CK + + KA+ L +M ++G+ PD V ++++++ CK ++ A E + + +
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 426 IKGYHVTVRT---------------------------YNIMINGL----CKEGLFDEALA 454
I V V T + M N + CK+G D A +
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATS 470
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
L ME KG P+ + + ++ A + A + EM+ +GL
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 5/213 (2%)
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+TP +Y +++ +NK +D A++ F M K++P ++++ L +S I A
Sbjct: 167 LTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
E+ ++M G D T L+ + ++A+ + +++ +G +PD + +++ +
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 409 CKEGRLKNAQEVFQDLVIK-GYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
CK L A ++ +++ K G + TY +I KEG +EA+ ++ EM G IP
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG-IPM 343
Query: 468 AITFETIICALFEKGDNY-KAEKLLREMMARGL 499
++ T + + KG+ KA L M GL
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%)
Query: 350 LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
LVD G +N LL+ ++ +D A+ M D+ + P V N ++ L
Sbjct: 156 LVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLV 215
Query: 410 KEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
+ + A+E++ +V+ G T +++ +E +EA+ + + +G PD +
Sbjct: 216 RSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGL 275
Query: 470 TFETIICALFEKGDNYKAEKLLREMMAR 497
F + A + D A LLREM +
Sbjct: 276 LFSLAVQAACKTPDLVMALDLLREMRGK 303
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 248/471 (52%), Gaps = 14/471 (2%)
Query: 42 AISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+ +F+++ P+P+ + F G++ A K+ G P + T+I+
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 92 GLCLKGEV-RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
G LKG+ AL+ D+ G N T++ LC+ G+T + +LL ++E +
Sbjct: 418 GW-LKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
PNVV YN ++ C+ K + A +FS ++ K + P+ TY+ L+ G + A E+
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG-VKPDLFTYNSLMDGYC 269
++ MT NI + + + T+++ L K G +A+ +LA M+++ + +YNS++DG+
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
E++ A+A M G++PNV +Y+ +++GLCKN +D+AL + EM+ + D
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
Y +LIDG CK + A L E+ +G + YNSL+ ++ A+ L KKM
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
G++ D+ TY L+DGL K+G L A E++ ++ G Y +++NGL K+G F
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+ + + EM+ P+ + + +I + +G+ +A +L EM+ +G+L
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 238/479 (49%), Gaps = 37/479 (7%)
Query: 52 TSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA 111
TS + ++ G + A + ++L G + V T+LI G C ++ AL D +
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
G N V++ LI+ + G+ +L+ +++E + P+V +TII K + +
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A LF E ++ +V N++L C G+ EATELL +M + IGP+V+++N ++
Sbjct: 428 ALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
++ N+ A+ V + ++++G+KP+ +TY+ L+DG ++ A+ ++N M +
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEM--------ECIK-------------------- 323
N Y II+GLCK +A L A M C+
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606
Query: 324 --------IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
I P+ ITY+SL++GLCK+ R+ A E+ DEM NKG D Y +L+D CK
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
+++ A AL ++ ++G+ P YN L+ G G + A ++++ ++ G + T
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
Y +I+GL K+G A L +EM+ G +PD I + I+ L +KG K K+ EM
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 223/420 (53%), Gaps = 2/420 (0%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
P T T++I +G + A++ D++++ G +N V+ +LI G C+ ++L L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
++E PN V ++ +I+ K+ + A + +M V ++P V ++++ G+
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
+ +EA +L DE + +V NT++ L K+G EA +L+ M +G+ P++ +
Sbjct: 422 GQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
YN++M G+C ++ A + +++ ++G+ PN ++YSI+I G +N AL + M
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLCKSHHV 379
I + + Y ++I+GLCK G+ S A EL+ M K +YNS++D K +
Sbjct: 541 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEM 600
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
D A+A ++M GI P+V+TY LM+GLCK R+ A E+ ++ KG + + Y +
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
I+G CK + A AL SE+ ++G P + ++I G+ A L ++M+ GL
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 200/379 (52%), Gaps = 11/379 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQI----------PSAFSVLGKILKKGYRPDAVTLTTL 89
D+A + +++ P+++ + + A V IL+KG +P+ T + L
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL-RQVEGHL 148
I G + + AL+ + + + +N V Y T+I GLC++GQT + +LL +E
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
+ + + YN+IID K+ + A + EM +SP+V+TY SL+ G C ++ +A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
E+ DEM K + D+ + L+D K N++ A + + ++++G+ P YNSL+ G+
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
+ + A+ + M + G+ ++ +Y+ +I GL K+ + A L+ EM+ + ++PD
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
I Y+ +++GL K G+ ++ +EM + YN+++ + ++D+A L +
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 389 MRDQGIQPDVVTYNILMDG 407
M D+GI PD T++IL+ G
Sbjct: 820 MLDKGILPDGATFDILVSG 838
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 199/382 (52%), Gaps = 1/382 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+ A +L K+ +G P+ V+ ++ G C + + A +++ +G + N +Y
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI G R + +L+++ + ++ N V+Y TII+ LCK S A L + M+
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 182 -KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
K++ ++YNS++ GF G++ A +EM I P+VIT+ +L++ L K +
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
+A + M +GVK D+ Y +L+DG+C + + A A+ + + + G+ P+ Y+ +I
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
G + AL+L+ +M + D TY++LIDGL K G + A EL EM G
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
D+ Y +++ L K K + + ++M+ + P+V+ YN ++ G +EG L A +
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 421 FQDLVIKGYHVTVRTYNIMING 442
+++ KG T++I+++G
Sbjct: 817 HDEMLDKGILPDGATFDILVSG 838
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 199/425 (46%), Gaps = 37/425 (8%)
Query: 107 DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKD 166
D + GF +N ++ L+ + QT ++ ++ Q+ V P N + +L +
Sbjct: 152 DSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQR 211
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTY------------------------------NSLLY 196
+++A L+S MV V D VT +SLLY
Sbjct: 212 NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271
Query: 197 GF-----CIVGQLKEATELLDEMTRKNIG-PDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
C L A LL EM K + P T+ +++ A K+GN+ +A + M+
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
G+ ++ SL+ G+C N++ A+ + + M + G +PN ++S++I KN ++
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
+AL + +ME + + P ++I G K + A +L DE G A+ F N++L
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTIL 450
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
LCK D+A L KM +GI P+VV+YN +M G C++ + A+ VF +++ KG
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
TY+I+I+G + AL +++ M + + ++TII L + G KA +L
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 491 LREMM 495
L M+
Sbjct: 571 LANMI 575
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 217/489 (44%), Gaps = 41/489 (8%)
Query: 17 NNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK 76
NN P S+ F S +PS RLL T E + S S+L K
Sbjct: 21 NNKPFCSQSQFPKESENPSQEQ---------RLLVYGSTS---EENPVTSKVSLLSA--K 66
Query: 77 KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFR---LNQVSYGTLIKGLCRMGQ 133
+ DA + L L + AL+F++ AR +R + + LI L +
Sbjct: 67 PEQKDDASVIDVL---LNRRNNPEAALRFYN--WARPWRGSFEDGDVFWVLIHILVSSPE 121
Query: 134 T--RASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
T RAS L+R V P + S+ KLV A + E+ + +
Sbjct: 122 TYGRASDLLIRYVSTSNPTP--------MASVLVSKLVDSAKSFGFEVNSR-------AF 166
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
N LL + Q A +++++M ++ P N + AL + ++ EAK + + M+
Sbjct: 167 NYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVA 226
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
GV D T LM + +A+ +L+ +RG P+ YS+ + CK +
Sbjct: 227 IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAM 286
Query: 312 ALNLFAEMECIKI-IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
A +L EM+ K+ +P TY+S+I K G + A L DEM + G + SL+
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
CK++ + A+ L KM +G P+ VT+++L++ K G ++ A E ++ + + G
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+V + +I G K +EAL L E + G + + TI+ L ++G +A +L
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATEL 465
Query: 491 LREMMARGL 499
L +M +RG+
Sbjct: 466 LSKMESRGI 474
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 207/384 (53%), Gaps = 4/384 (1%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV 99
D +S NRLLG S E G++ A ++L + + + + +L+ L V
Sbjct: 131 SDGVSPNNRLLGFL-VSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRV 187
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI 159
A++ D+ + + ++ LI+GLC +G+ +L+LL + G +P++V YNT+
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKV-SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKN 218
I CK ++ A +F ++ V SPDVVTY S++ G+C G+++EA+ LLD+M R
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 219 IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAI 278
I P +TFN LVD K G + A+ + M+ G PD+ T+ SL+DGYC V ++++
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
+ M RG+ PN +YSI+I+ LC + +A L ++ IIP Y+ +IDG
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
CK+G+++ A +V+EM K DK T+ L+ C + +A+++ KM G PD
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQ 422
+T + L+ L K G K A + Q
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 207/409 (50%), Gaps = 3/409 (0%)
Query: 75 LKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQT 134
K R T L + LC G A Q + + + G N G L+ G+
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 135 RASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSL 194
+ LL Q V+ ++ N+++++L K V DA LF E + + D T+N L
Sbjct: 155 HFATALLLQ--SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 195 LYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV 254
+ G C VG+ ++A ELL M+ PD++T+NTL+ K + +A + + V
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 255 -KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
PD+ TY S++ GYC ++ +A ++L+ M + G+ P ++++++ G K + A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
+ +M PD +T++SLIDG C+ G++S + L +EM+ +G + FTY+ L++ L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
C + + KA L ++ + I P YN ++DG CK G++ A + +++ K
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
T+ I+I G C +G EA+++ +M GC PD IT +++ L + G
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 3/380 (0%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y L + LC+ G + Q+ ++ V PN + ++ S + + A L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+V + NSLL + ++++A +L DE R D TFN L+ L G
Sbjct: 165 F--EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV-TPNVHSYSI 298
++A +L VM G +PD+ TYN+L+ G+C NE+NKA + + V +P+V +Y+
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I G CK + EA +L +M + I P +T++ L+DG K+G + A E+ +M + G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
D T+ SL+D C+ V + L ++M +G+ P+ TY+IL++ LC E RL A+
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
E+ L K YN +I+G CK G +EA ++ EME K C PD ITF +I
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 479 FEKGDNYKAEKLLREMMARG 498
KG ++A + +M+A G
Sbjct: 463 CMKGRMFEAVSIFHKMVAIG 482
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 198/399 (49%), Gaps = 8/399 (2%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY--GTLIKGLCRMGQTR 135
G P+ L L+ KG+ L F ++ + F + +L+ L ++ +
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGK----LHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVE 188
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+++L + + +N +I LC A L M PD+VTYN+L+
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 196 YGFCIVGQLKEATELLDEMTRKNI-GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV 254
GFC +L +A+E+ ++ ++ PDV+T+ +++ K G ++EA ++L M++ G+
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 255 KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN 314
P T+N L+DGY E+ A I M G P+V +++ +I G C+ V +
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC 374
L+ EM + P+ TYS LI+ LC R+ A EL+ ++ +K F YN ++D C
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
K+ V++A + ++M + +PD +T+ IL+ G C +GR+ A +F +V G
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
T + +++ L K G+ EA L+++ KG + + ET
Sbjct: 489 TVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLET 526
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 153/314 (48%), Gaps = 3/314 (0%)
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
TYN L C G A ++ + M + P+ LV + ++G + A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
V+ NSL++ ++ + A+ + + + + +++I+I GLC
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA-DKFTYNS 368
++AL L M PD +TY++LI G CKS ++ A E+ ++ + + D TY S
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
++ CK+ + +A +L M GI P VT+N+L+DG K G + A+E+ ++ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE 488
V T+ +I+G C+ G + L EM +G P+A T+ +I AL + KA
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 489 KLLREMMARGLLEK 502
+LL ++ ++ ++ +
Sbjct: 403 ELLGQLASKDIIPQ 416
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 141/285 (49%), Gaps = 5/285 (1%)
Query: 218 NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKA 277
NI T+N L +L K G A + M GV P+ L+ + +++ A
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 278 IA-ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
A +L S G V+S +++ L K V++A+ LF E + DT T++ LI
Sbjct: 158 TALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI-Q 395
GLC G+ A EL+ M G D TYN+L+ CKS+ ++KA + K ++ +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
PDVVTY ++ G CK G+++ A + D++ G + T T+N++++G K G A +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+M GC PD +TF ++I G + +L EM ARG+
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 207/384 (53%), Gaps = 4/384 (1%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV 99
D +S NRLLG S E G++ A ++L + + + + +L+ L V
Sbjct: 131 SDGVSPNNRLLGFL-VSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRV 187
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI 159
A++ D+ + + ++ LI+GLC +G+ +L+LL + G +P++V YNT+
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKV-SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKN 218
I CK ++ A +F ++ V SPDVVTY S++ G+C G+++EA+ LLD+M R
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 219 IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAI 278
I P +TFN LVD K G + A+ + M+ G PD+ T+ SL+DGYC V ++++
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
+ M RG+ PN +YSI+I+ LC + +A L ++ IIP Y+ +IDG
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
CK+G+++ A +V+EM K DK T+ L+ C + +A+++ KM G PD
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQ 422
+T + L+ L K G K A + Q
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 207/409 (50%), Gaps = 3/409 (0%)
Query: 75 LKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQT 134
K R T L + LC G A Q + + + G N G L+ G+
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 135 RASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSL 194
+ LL Q V+ ++ N+++++L K V DA LF E + + D T+N L
Sbjct: 155 HFATALLLQ--SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 195 LYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV 254
+ G C VG+ ++A ELL M+ PD++T+NTL+ K + +A + + V
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 255 -KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
PD+ TY S++ GYC ++ +A ++L+ M + G+ P ++++++ G K + A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
+ +M PD +T++SLIDG C+ G++S + L +EM+ +G + FTY+ L++ L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
C + + KA L ++ + I P YN ++DG CK G++ A + +++ K
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
T+ I+I G C +G EA+++ +M GC PD IT +++ L + G
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 3/380 (0%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y L + LC+ G + Q+ ++ V PN + ++ S + + A L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+V + NSLL + ++++A +L DE R D TFN L+ L G
Sbjct: 165 F--EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV-TPNVHSYSI 298
++A +L VM G +PD+ TYN+L+ G+C NE+NKA + + V +P+V +Y+
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I G CK + EA +L +M + I P +T++ L+DG K+G + A E+ +M + G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
D T+ SL+D C+ V + L ++M +G+ P+ TY+IL++ LC E RL A+
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
E+ L K YN +I+G CK G +EA ++ EME K C PD ITF +I
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 479 FEKGDNYKAEKLLREMMARG 498
KG ++A + +M+A G
Sbjct: 463 CMKGRMFEAVSIFHKMVAIG 482
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 198/399 (49%), Gaps = 8/399 (2%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY--GTLIKGLCRMGQTR 135
G P+ L L+ KG+ L F ++ + F + +L+ L ++ +
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGK----LHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVE 188
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+++L + + +N +I LC A L M PD+VTYN+L+
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 196 YGFCIVGQLKEATELLDEMTRKNI-GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV 254
GFC +L +A+E+ ++ ++ PDV+T+ +++ K G ++EA ++L M++ G+
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 255 KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN 314
P T+N L+DGY E+ A I M G P+V +++ +I G C+ V +
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC 374
L+ EM + P+ TYS LI+ LC R+ A EL+ ++ +K F YN ++D C
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
K+ V++A + ++M + +PD +T+ IL+ G C +GR+ A +F +V G
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
T + +++ L K G+ EA L+++ KG + + ET
Sbjct: 489 TVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLET 526
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 153/314 (48%), Gaps = 3/314 (0%)
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
TYN L C G A ++ + M + P+ LV + ++G + A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
V+ NSL++ ++ + A+ + + + + +++I+I GLC
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA-DKFTYNS 368
++AL L M PD +TY++LI G CKS ++ A E+ ++ + + D TY S
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
++ CK+ + +A +L M GI P VT+N+L+DG K G + A+E+ ++ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE 488
V T+ +I+G C+ G + L EM +G P+A T+ +I AL + KA
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 489 KLLREMMARGLLEK 502
+LL ++ ++ ++ +
Sbjct: 403 ELLGQLASKDIIPQ 416
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 141/285 (49%), Gaps = 5/285 (1%)
Query: 218 NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKA 277
NI T+N L +L K G A + M GV P+ L+ + +++ A
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 278 IA-ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
A +L S G V+S +++ L K V++A+ LF E + DT T++ LI
Sbjct: 158 TALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI-Q 395
GLC G+ A EL+ M G D TYN+L+ CKS+ ++KA + K ++ +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
PDVVTY ++ G CK G+++ A + D++ G + T T+N++++G K G A +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+M GC PD +TF ++I G + +L EM ARG+
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 218/439 (49%), Gaps = 17/439 (3%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEFGQIPS-----------AFSVLGKILKKGYRPDAVTLT 87
A+ A+ F R+ P + + I AF+V ++LK P+ T
Sbjct: 143 AEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFG 202
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
L+ GL KG A + DD+ RG N+V+Y LI GLC+ G + +L +++
Sbjct: 203 ILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS 262
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
P+ V +N ++D CK + +AF L + Y+SL+ G + +A
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
EL M +KNI PD+I + L+ L K G +++A +L+ M +G+ PD + YN+++
Sbjct: 323 FELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA 382
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
C + + ++ M++ P+ +++I+I +C+N +V EA +F E+E P
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPS 442
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF-----TYNSLLDVLCKSHHVDKA 382
T+++LIDGLCKSG + A L+ +M G+PA F + N D + +S + KA
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKME-VGRPASLFLRLSHSGNRSFDTMVESGSILKA 501
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
D G PD+V+YN+L++G C+ G + A ++ L +KG TYN +ING
Sbjct: 502 YRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
Query: 443 LCKEGLFDEALALLSEMED 461
L + G +EA L +D
Sbjct: 562 LHRVGREEEAFKLFYAKDD 580
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 221/437 (50%), Gaps = 9/437 (2%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF--HDDVVARGFRLNQV 119
G A G++ + RPD T +++ + ++ EV L F +++++ N
Sbjct: 141 GMAEKAVESFGRMKEFDCRPDVFTYNVILR-VMMREEVFFMLAFAVYNEMLKCNCSPNLY 199
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++G L+ GL + G+T + ++ + G + PN V Y +I LC+ DA LF EM
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
PD V +N+LL GFC +G++ EA ELL + + +++L+D L +
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+A + A M+K+ +KPD+ Y L+ G +I A+ +L+SM +G++P+ + Y+ +
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I LC +++E +L EM + PD T++ LI +C++G + A E+ E+ G
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV-----TYNILMDGLCKEGRL 414
T+N+L+D LCKS + +A L KM + G + + N D + + G +
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKM-EVGRPASLFLRLSHSGNRSFDTMVESGSI 498
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
A G + +YN++ING C+ G D AL LL+ ++ KG PD++T+ T+
Sbjct: 499 LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 475 ICALFEKGDNYKAEKLL 491
I L G +A KL
Sbjct: 559 INGLHRVGREEEAFKLF 575
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 213/436 (48%), Gaps = 40/436 (9%)
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
Q +++ + G ++ + LI +MG +++ +++ +P+V YN I+ +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 164 CKDKLVSD-AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD 222
++++ AF +++EM+ SP++ T+ L+ G G+ +A ++ D+MT + I P+
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 223 VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILN 282
+T+ L+ L + G+ +A+ + M G PD +N+L+DG+C + + +A +L
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
+ G + YS +I GL + + +A L+A M I PD I Y+ LI GL K+G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
+I A +L+ M +KG D + YN+++ LC +++ +L +M + PD T+
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME-- 460
IL+ +C+ G ++ A+E+F ++ G +V T+N +I+GLCK G EA LL +ME
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472
Query: 461 -------------------------------------DKGCIPDAITFETIICALFEKGD 483
D G PD +++ +I GD
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 484 NYKAEKLLREMMARGL 499
A KLL + +GL
Sbjct: 533 IDGALKLLNVLQLKGL 548
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 173/344 (50%), Gaps = 1/344 (0%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
+ +ID L +D + E+ VS D + L+ + +G ++A E M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 216 RKNIGPDVITFNTLVDALGKEG-NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
+ PDV T+N ++ + +E A V M+K P+L+T+ LMDG
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+ A + + M RG++PN +Y+I+I GLC+ D+A LF EM+ PD++ +++L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
+DG CK GR+ A+EL+ G Y+SL+D L ++ +A L M + I
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
+PD++ Y IL+ GL K G++++A ++ + KG YN +I LC GL +E +
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
L EM + PDA T +IC++ G +AE++ E+ G
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 223/506 (44%), Gaps = 89/506 (17%)
Query: 42 AISIFNRLLGTSPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A +++N +L + +P++ FG + A + + +G P+ VT T LI
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE--GHL- 148
GLC +G A + ++ G + V++ L+ G C++G+ + +LLR E G +
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 149 --------------------------------VKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+KP++++Y +I L K + DA L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
S M K +SPD YN+++ C G L+E L EM+ PD T L+ ++ +
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM------------ 284
G V+EA+ + + K G P + T+N+L+DG C E+ +A +L+ M
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 285 ---------------------------AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
A G +P++ SY+++I+G C+ +D AL L
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN-KGQPADKFTYNSLLDVLCKS 376
++ + PD++TY++LI+GL + GR A++L + + PA Y SL+ C+
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPA---VYRSLMTWSCRK 598
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
V A L K + D T N + + KEG + A +L + +T+ Y
Sbjct: 599 RKVLVAFNLWMKYLKKISCLDDETANEI-EQCFKEGETERALRRLIELDTRKDELTLGPY 657
Query: 437 NIMINGLCKEGLFDEALALLSEMEDK 462
I + GLC+ G F EAL + S + +K
Sbjct: 658 TIWLIGLCQSGRFHEALMVFSVLREK 683
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 208/440 (47%), Gaps = 55/440 (12%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
AF + +LKK +PD + T LI+GL G++ AL+ + ++G + Y +IK
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Query: 127 GLCRMG--QTRASLQL-LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
LC G + SLQL + + E P+ + +I S+C++ LV +A +F+E+
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESF---PDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF-------NTLVDALGKE 236
SP V T+N+L+ G C G+LKEA LL +M +G F N D + +
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKM---EVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
G++ +A LA G PD+ +YN L++G+C +I+ A+ +LN + +G++P+ +Y
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV----- 351
+ +I+GL + +EA LF + + P Y SL+ C+ ++ A+ L
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRKVLVAFNLWMKYLK 613
Query: 352 ------DEMHNKGQPA--------------------DKFT---YNSLLDVLCKSHHVDKA 382
DE N+ + D+ T Y L LC+S +A
Sbjct: 614 KISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEA 673
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
+ + +R++ I + L+ GLCK +L A EVF + + + R N +++
Sbjct: 674 LMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSS 733
Query: 443 LCKEGLFDEALALLSEMEDK 462
L + E + ++S++ ++
Sbjct: 734 LLES---TEKMEIVSQLTNR 750
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 1/275 (0%)
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
F ++D L ++ L + GV D + + L+ Y + KA+ M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDE-ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
+ P+V +Y++I+ + + ++ A ++ EM P+ T+ L+DGL K GR
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
S A ++ D+M +G ++ TY L+ LC+ D A L +M+ G PD V +N L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGC 464
+DG CK GR+ A E+ + G+ + +R Y+ +I+GL + + +A L + M K
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 465 IPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
PD I + +I L + G A KLL M ++G+
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 142/357 (39%), Gaps = 78/357 (21%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
PDA T T LI +C G VR A + ++ G + ++ LI GLC+ G+ + + L
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 141 LRQVE-------------------------GHLVK--------------PNVVMYNTIID 161
L ++E G ++K P++V YN +I+
Sbjct: 466 LHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
C+ + A L + + +K +SPD VTYN+L+ G VG+ +EA +L P
Sbjct: 526 GFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585
Query: 222 DV---------------ITFNTLVDALGK-----------------EGNVKEAKNVLAVM 249
V + FN + L K EG + A L +
Sbjct: 586 AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIEL 645
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
+ + L Y + G C ++A+ + + + ++ + S +IHGLCK + +
Sbjct: 646 DTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQL 705
Query: 310 DEALNLFAEM--ECIKIIPDTITY--SSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
D A+ +F K++P Y SSL++ K +S +L + M G D
Sbjct: 706 DAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVS---QLTNRMERAGYNVD 759
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 210/396 (53%), Gaps = 5/396 (1%)
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS--YGTLIKGLCRMGQTRASLQLLRQV 144
T +I+ L + E +A+ F++ V R R N+ +I L R G+ + ++
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVG-- 202
V ++ +I + + L +A ++F+ M + P++VTYN+++ C G
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGM 318
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
+ K+ + DEM R + PD ITFN+L+ + G + A+N+ M + ++ D+F+YN
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
+L+D C +++ A IL M + + PNV SYS +I G K DEALNLF EM +
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
I D ++Y++L+ K GR A +++ EM + G D TYN+LL K D+
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
+ +M+ + + P+++TY+ L+DG K G K A E+F++ G V Y+ +I+
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 443 LCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
LCK GL A++L+ EM +G P+ +T+ +II A
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 220/467 (47%), Gaps = 22/467 (4%)
Query: 50 LGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDV 109
L ++ ++ +G++ A + GY + LI G A+ + +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 110 VARGFRLNQVSYGTLIKGLCRMG-QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
G R N V+Y +I + G + + + +++ + V+P+ + +N+++ + L
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
A NLF EM +++ DV +YN+LL C GQ+ A E+L +M K I P+V++++T
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
++D K G EA N+ M G+ D +YN+L+ Y V +A+ IL MA G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+ +V +Y+ ++ G K DE +F EM+ ++P+ +TYS+LIDG K G A
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
E+ E + G AD Y++L+D LCK+ V A++L +M +GI P+VVTYN ++D
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 409 CKEGRLKNAQ-------------------EVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ + + E + VI+ + N C+EG+
Sbjct: 595 GRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQ 654
Query: 450 DEA--LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+ + L + +M P+ +TF I+ A A LL E+
Sbjct: 655 ELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 178/346 (51%), Gaps = 1/346 (0%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+ + +I +L + V+ A +F V +++L+ + G +EA + + M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 215 TRKNIGPDVITFNTLVDALGKEG-NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
+ P+++T+N ++DA GK G K+ M + GV+PD T+NSL+
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
A + + M R + +V SY+ ++ +CK +D A + A+M +I+P+ ++YS+
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
+IDG K+GR A L EM G D+ +YN+LL + K ++A+ + ++M G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
I+ DVVTYN L+ G K+G+ ++VF ++ + + TY+ +I+G K GL+ EA+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ E + G D + + +I AL + G A L+ EM G+
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 240/482 (49%), Gaps = 46/482 (9%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA-LQFHDDVVARGF-- 114
+ + GQ+ A ++ + + G PD ++ +LI G C G++R A L + GF
Sbjct: 66 VCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFIC 125
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQV---EGHLVK---PNVVMYNTIIDSLCKDKL 168
+ + VS+ +L G +M ++L +V G ++K PNVV Y+T ID+ CK
Sbjct: 126 KPDIVSFNSLFNGFSKM-------KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGE 178
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
+ A F M +SP+VVT+ L+ G+C G L+ A L EM R + +V+T+
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
L+D K+G ++ A+ + + M++ V+P+ Y +++DG+ + + A+ L M +G
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+ ++ +Y +II GLC N + EA + +ME ++PD + ++++++ KSGR+ A
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 349 ELVDEMHNKG------------------------------QPADKFTYNSLLDVLCKSHH 378
+ ++ +G + A+ Y L+D LCK
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGD 418
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
+ L K+ + G+ PD Y + GLCK+G L +A ++ +V +G + + Y
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTT 478
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
+I GL +GL EA + EM + G PD+ F+ +I A ++G+ A LL +M RG
Sbjct: 479 LIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Query: 499 LL 500
L+
Sbjct: 539 LV 540
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 232/474 (48%), Gaps = 42/474 (8%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ A L ++ K PD T I L +L+F +V+RG+ ++ S+ +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA----------- 172
++ +C++GQ + + ++ + +P+V+ YN++ID C++ + A
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 173 --------------FNLFSEM------------VVKKVSPDVVTYNSLLYGFCIVGQLKE 206
FN FS+M ++K SP+VVTY++ + FC G+L+
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A + M R + P+V+TF L+D K G+++ A ++ M + + ++ TY +L+D
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G+C E+ +A + + M + V PN Y+ II G + D A+ A+M +
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
D Y +I GLC +G++ A E+V++M D + ++++ KS + A+ +
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
K+ ++G +PDVV + ++DG+ K G+L A F + K V Y ++I+ LCKE
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKANDV---MYTVLIDALCKE 416
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
G F E L S++ + G +PD + + I L ++G+ A KL M+ GLL
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 178/375 (47%), Gaps = 49/375 (13%)
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYN----SLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
+V +A S + PD T N L+ C + LK L + + P
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLK----FLAYLVSRGYTPHR 56
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
+FN++V + K G VK A++++ M + G +PD+ +YNSL+DG+C +I A +L S
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 284 M-AQRGV--TPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGLC 339
+ A G P++ S++ + +G K KM+DE M +C P+ +TYS+ ID C
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS--PNVVTYSTWIDTFC 174
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
KSG + A + M + T+ L+D CK+ ++ A++L K+MR + +VV
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVI--------------------------------- 426
TY L+DG CK+G ++ A+E++ +V
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 427 --KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDN 484
+G + + Y ++I+GLC G EA ++ +ME +PD + F T++ A F+ G
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 485 YKAEKLLREMMARGL 499
A + +++ RG
Sbjct: 355 KAAVNMYHKLIERGF 369
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 15/266 (5%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKIL----------KKGYRPDAVTLT 87
++D+A+ ++L I +G I S GK+ K PD V T
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
T++ G ++ A+ + ++ RGF + V+ T+I G+ + GQ ++ V
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-----VYFC 397
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
+ K N VMY +ID+LCK+ + LFS++ + PD Y S + G C G L +A
Sbjct: 398 IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+L M ++ + D++ + TL+ L +G + EA+ V M+ G+ PD ++ L+
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNV 293
Y + A +L M +RG+ V
Sbjct: 518 YEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 130/274 (47%), Gaps = 5/274 (1%)
Query: 47 NRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFH 106
N L+ T+ + G +A L K+L +G R D +I GLC G+++ A +
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 107 DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKD 166
+D+ + V + T++ + G+ +A++ + ++ +P+VV +T+ID + K+
Sbjct: 327 EDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF 226
+ +A F ++K + V Y L+ C G E L +++ + PD +
Sbjct: 387 GQLHEAIVYF---CIEKAND--VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMY 441
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
+ + L K+GN+ +A + M+++G+ DL Y +L+ G + +A + + M
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN 501
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
G++P+ + ++I K + A +L +M+
Sbjct: 502 SGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQ 535
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 184/324 (56%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
NV ++N +++ CK+ +SDA +F E+ + + P VV++N+L+ G+C VG L E L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+M + PDV T++ L++AL KE + A + M K+G+ P+ + +L+ G+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
EI+ M +G+ P++ Y+ +++G CKN + A N+ M + PD ITY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++LIDG C+ G + A E+ EM G D+ +++L+ +CK V A ++M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
GI+PD VTY ++MD CK+G + ++ +++ G+ +V TYN+++NGLCK G
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 452 ALALLSEMEDKGCIPDAITFETII 475
A LL M + G +PD IT+ T++
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLL 562
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 193/364 (53%), Gaps = 9/364 (2%)
Query: 44 SIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRAL 103
++ +R++ +PT +I F +IL G+ + L+ C +G + A
Sbjct: 210 NLLDRMMKLNPTGTIWGFYM---------EILDAGFPLNVYVFNILMNKFCKEGNISDAQ 260
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
+ D++ R + VS+ TLI G C++G +L Q+E +P+V Y+ +I++L
Sbjct: 261 KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
CK+ + A LF EM + + P+ V + +L++G G++ E +M K + PD+
Sbjct: 321 CKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
+ +NTLV+ K G++ A+N++ M+++G++PD TY +L+DG+C ++ A+ I
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
M Q G+ + +S ++ G+CK V +A EM I PD +TY+ ++D CK G
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
++L+ EM + G TYN LL+ LCK + A L M + G+ PD +TYN
Sbjct: 501 AQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNT 560
Query: 404 LMDG 407
L++G
Sbjct: 561 LLEG 564
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 199/370 (53%)
Query: 131 MGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT 190
+G ++Q R H + ++D + K + + E++ +V
Sbjct: 183 LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYV 242
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
+N L+ FC G + +A ++ DE+T++++ P V++FNTL++ K GN+ E + M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
K +PD+FTY++L++ C N+++ A + + M +RG+ PN ++ +IHG +N +D
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
+ +M + PD + Y++L++G CK+G + A +VD M +G DK TY +L+
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
D C+ V+ A+ + K+M GI+ D V ++ L+ G+CKEGR+ +A+ ++++ G
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
TY +M++ CK+G LL EM+ G +P +T+ ++ L + G A+ L
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 491 LREMMARGLL 500
L M+ G++
Sbjct: 543 LDAMLNIGVV 552
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 182/338 (53%)
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
F+ +++ GF LN + L+ C+ G + ++ ++ ++P VV +NT+I+ C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
K + + F L +M + PDV TY++L+ C ++ A L DEM ++ + P+ +
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
F TL+ + G + K M+ +G++PD+ YN+L++G+C ++ A I++ M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
+RG+ P+ +Y+ +I G C+ V+ AL + EM+ I D + +S+L+ G+CK GR+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
A + EM G D TY ++D CK L K+M+ G P VVTYN+L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
++GLCK G++KNA + ++ G TYN ++ G
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 112/196 (57%)
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
K+L KG +PD V TL+ G C G++ A D ++ RG R ++++Y TLI G CR G
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+L++ ++++ + ++ + V ++ ++ +CK+ V DA EM+ + PD VTY
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
++ FC G + +LL EM P V+T+N L++ L K G +K A +L M+
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 253 GVKPDLFTYNSLMDGY 268
GV PD TYN+L++G+
Sbjct: 550 GVVPDDITYNTLLEGH 565
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 135/262 (51%), Gaps = 26/262 (9%)
Query: 28 HSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKK 77
H HS + I ++ + ++L P I+ + G + +A +++ ++++
Sbjct: 353 HGHSRNGEIDLMKES---YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G RPD +T TTLI G C G+V AL+ ++ G L++V + L+ G+C+ G+ +
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+ LR++ +KP+ V Y ++D+ CK F L EM P VVTYN LL G
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ--GVK 255
C +GQ+K A LLD M + PD IT+NTL+ EG+ + A + + K G+
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL-----EGHHRHANSSKRYIQKPEIGIV 584
Query: 256 PDLFTYNSLMDGYCLVNEINKA 277
DL +Y S +VNE+++A
Sbjct: 585 ADLASYKS------IVNELDRA 600
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 241/497 (48%), Gaps = 75/497 (15%)
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
++++KG D V+ + LI GL +G V AL ++ G N ++Y +I+GLC+MG
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+ + L ++ ++ + +Y T+ID +C+ ++ AF++ +M + + P ++TYN
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
+++ G C+ G++ EA DE+++ +G DVIT++TL+D+ K N+ + ++
Sbjct: 387 TVINGLCMAGRVSEA----DEVSKGVVG-DVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
+ DL N L+ + L+ +A A+ +M + +TP+ +Y+ +I G CK ++EA
Sbjct: 442 KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD- 371
L +F E+ + + Y+ +ID LCK G + A E++ E+ KG D T +LL
Sbjct: 502 LEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS 560
Query: 372 ----------------------------------VLCKSHHVDKAIALTKKMRDQGI--- 394
+LCK + AI + MR +G+
Sbjct: 561 IHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVT 620
Query: 395 -------------------------------QPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
DV+ Y I+++GLCKEG L A +
Sbjct: 621 FPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSF 680
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
+G + TYN +INGLC++G EAL L +E+ G +P +T+ +I L ++G
Sbjct: 681 AKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGL 740
Query: 484 NYKAEKLLREMMARGLL 500
AEKLL M+++GL+
Sbjct: 741 FLDAEKLLDSMVSKGLV 757
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 218/430 (50%), Gaps = 9/430 (2%)
Query: 58 IIEFGQIPSAFSVLGKILKKG--YRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFR 115
+E G++ +A VL + K Y D + +I G C G+ AL F + V G
Sbjct: 144 FVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVL 203
Query: 116 L-NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+ N V+Y TL+ LC++G+ L+R++E + + V Y+ I K + DA
Sbjct: 204 VPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALM 263
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
EMV K ++ DVV+Y+ L+ G G ++EA LL +M ++ + P++IT+ ++ L
Sbjct: 264 QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
K G ++EA + ++ G++ D F Y +L+DG C +N+A ++L M QRG+ P++
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+Y+ +I+GLC V EA + ++ D ITYS+L+D K I E+
Sbjct: 384 TYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRF 438
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
P D N LL +A AL + M + + PD TY ++ G CK G++
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ A E+F +L V YN +I+ LCK+G+ D A +L E+ +KG D T T+
Sbjct: 499 EEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL 557
Query: 475 ICALFEKGDN 484
+ ++ G +
Sbjct: 558 LHSIHANGGD 567
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 246/554 (44%), Gaps = 78/554 (14%)
Query: 16 LNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKIL 75
++ F + KP ++ D + + N + T+ ++ + G++ ++ ++
Sbjct: 178 ISGFCKIGKPELALGFFESAV---DSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
+G+ D V + I G G + AL ++V +G + VSY LI GL + G
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+L LL ++ V+PN++ Y II LCK + +AF LF+ ++ + D Y +L+
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
G C G L A +L +M ++ I P ++T+NT+++ L G V EA V +GV
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVV 409
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
D+ TY++L+D Y V I+ + I + + ++ +I++ EA L
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
+ M + + PDT TY+++I G CK+G+I A E+ +E+ K + YN ++D LCK
Sbjct: 470 YRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCK 528
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDG---------------------------- 407
+D A + ++ ++G+ D+ T L+
Sbjct: 529 KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGM 588
Query: 408 -------LCKEGRLKNAQEVFQDLVIKGYHVT---------------------------- 432
LCK G + A EV+ + KG VT
Sbjct: 589 LNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGET 648
Query: 433 ------VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYK 486
V Y I+INGLCKEG +AL L S + +G + IT+ ++I L ++G +
Sbjct: 649 TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVE 708
Query: 487 AEKLLREMMARGLL 500
A +L + GL+
Sbjct: 709 ALRLFDSLENIGLV 722
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 237/501 (47%), Gaps = 54/501 (10%)
Query: 40 DDAISIFNRLLGT----------SPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
++A +FNR+L + I G + AFS+LG + ++G +P +T T+
Sbjct: 329 EEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTV 388
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I GLC+ G V A D V++G + ++Y TL+ ++ A L++ R+ +
Sbjct: 389 INGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI 443
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
++VM N ++ + +A L+ M ++PD TY +++ G+C GQ++EA E
Sbjct: 444 PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALE 503
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG-- 267
+ +E+ + ++ + +N ++DAL K+G + A VL + ++G+ D+ T +L+
Sbjct: 504 MFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIH 562
Query: 268 ---------------------------------YCLVNEINKAIAILNSMAQRGVTPNVH 294
C AI + M ++G+T V
Sbjct: 563 ANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT--VT 620
Query: 295 SYSIIIHGLCKN-KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
S I+ L N + +D L + E D I Y+ +I+GLCK G + A L
Sbjct: 621 FPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSF 680
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
++G + TYNSL++ LC+ + +A+ L + + G+ P VTY IL+D LCKEG
Sbjct: 681 AKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGL 740
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
+A+++ +V KG + YN +++G CK G ++A+ ++S PDA T +
Sbjct: 741 FLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSS 800
Query: 474 IICALFEKGDNYKAEKLLREM 494
+I +KGD +A + E
Sbjct: 801 MIKGYCKKGDMEEALSVFTEF 821
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 225/505 (44%), Gaps = 71/505 (14%)
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS 120
+ + S L +LK G+ P ++ ++ L + LQF+ + ++ +N
Sbjct: 4 YPRTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRI 63
Query: 121 YGTLIKGLCRMGQTRASLQLLR-QVEGHLVKPNVVMYNTIID--SLCKDKLVSDAFNLFS 177
Y + + + + + + + + P M +++I S+ +D L
Sbjct: 64 YSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRD 123
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG----------------- 220
+ P +T+ SL+Y F G++ A E+L+ MT KN+
Sbjct: 124 CLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCK 183
Query: 221 ---------------------PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
P+++T+ TLV AL + G V E ++++ + +G + D
Sbjct: 184 IGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCV 243
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
Y++ + GY + A+ M ++G+ +V SYSI+I GL K V+EAL L +M
Sbjct: 244 FYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
+ P+ ITY+++I GLCK G++ A+ L + + + G D+F Y +L+D +C+ ++
Sbjct: 304 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL 363
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV--IKGYHVTVRTY- 436
++A ++ M +GIQP ++TYN +++GLC GR+ A EV + +V + Y + +Y
Sbjct: 364 NRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYI 423
Query: 437 ---------------------------NIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
NI++ G + EA AL M + PD
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 470 TFETIICALFEKGDNYKAEKLLREM 494
T+ T+I + G +A ++ E+
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNEL 508
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 166/333 (49%), Gaps = 27/333 (8%)
Query: 93 LCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC-RMGQTRASLQLLRQVEGHLVKP 151
LC +G A++ + + +G + S T++K L + A L ++ E L
Sbjct: 596 LCKRGSFEAAIEVYMIMRRKGLTVTFPS--TILKTLVDNLRSLDAYLLVVNAGETTLSSM 653
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+V+ Y II+ LCK+ + A NL S + V+ + +TYNSL+ G C G L EA L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
D + + P +T+ L+D L KEG +A+ +L M+ +G+ P++ YNS++DGYC +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ A+ +++ VTP+ + S +I G CK ++EAL++F E + I D +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
LI G C GR+ A L+ EM S++ ++ + VD +A ++ +R
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREM---------LVSESVVKLI---NRVDAELAESESIRG 881
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
++ LC++GR+ A ++ ++
Sbjct: 882 FLVE------------LCEQGRVPQAIKILDEI 902
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 143/282 (50%), Gaps = 24/282 (8%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D + T +I GLC +G + +AL +RG LN ++Y +LI GLC+ G +L+L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+E + P+ V Y +ID+LCK+ L DA L MV K + P+++ YNS++ G+C +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
GQ ++A ++ + PD T ++++ K+G+++EA +V + + D F +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
L+ G+C + +A +L M + S S++ K+++ AE E
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREM--------LVSESVV-------KLINRVDAELAESES 878
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
I+ + LC+ GR+ A +++DE+ + P+ K
Sbjct: 879 IR---------GFLVELCEQGRVPQAIKILDEISSTIYPSGK 911
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 170/334 (50%), Gaps = 8/334 (2%)
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD-EMTRKNIGPDVITFNTLVD 231
+S++ K+++ + Y+ + + F + + ++A + ++ +++ +I P ++L+
Sbjct: 46 LQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIH 105
Query: 232 ALGKEGNVKEAKNVLAV---MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
+ +K +L + + G P T+ SL+ + E++ AI +L M +
Sbjct: 106 GFSITRD-DPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKN 164
Query: 289 VTPNVHSY--SIIIHGLCKNKMVDEALNLF-AEMECIKIIPDTITYSSLIDGLCKSGRIS 345
V ++ S +I G CK + AL F + ++ ++P+ +TY++L+ LC+ G++
Sbjct: 165 VNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVD 224
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
+LV + ++G D Y++ + K + A+ ++M ++G+ DVV+Y+IL+
Sbjct: 225 EVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILI 284
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
DGL KEG ++ A + ++ +G + TY +I GLCK G +EA L + + G
Sbjct: 285 DGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIE 344
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D + T+I + KG+ +A +L +M RG+
Sbjct: 345 VDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 164/357 (45%), Gaps = 40/357 (11%)
Query: 22 VSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK----- 76
V+ PS +L ++ + D + + N T + +I++ I + G ++K
Sbjct: 619 VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLC 678
Query: 77 -----KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM 131
+G + +T +LI GLC +G + AL+ D + G ++V+YG LI LC+
Sbjct: 679 SFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKE 738
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
G + +LL + + PN+++YN+I+D CK DA + S ++ +V+PD T
Sbjct: 739 GLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTV 798
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
+S++ G+C G ++EA + E KNI D F L+ +G ++EA+ +L M+
Sbjct: 799 SSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 858
Query: 252 QG--------VKPDLFTYNSLMDGY----CLVNEINKAIAILNSMAQRGVTP---NVHSY 296
V +L S+ G+ C + +AI IL+ ++ + P N+ SY
Sbjct: 859 SESVVKLINRVDAELAESESI-RGFLVELCEQGRVPQAIKILDEISST-IYPSGKNLGSY 916
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIK--IIPDTITYSSLIDGLCKSGRISHAWELV 351
+ + LN E E K + D + S + LC SG++ A E V
Sbjct: 917 QRL-----------QFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFV 962
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 223/489 (45%), Gaps = 38/489 (7%)
Query: 48 RLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD 107
RL S ++++ G I +A V ++ YR + I L + A +
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 108 DVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDK 167
D+ GF L +Y I GLC++ + LL +E P++ +N +D LC++
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD----- 222
V A F MV + PDVV+Y L+ G G++ +A E+ + M R + PD
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 223 -------------------------------VITFNTLVDALGKEGNVKEAKNVLAVMMK 251
+ +N L+ K G +++A+ + + M K
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
G +PDL TYN L++ Y N + +A ++ M + G+ + +SY+ ++ C+ D+
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 312 ALNLFA-EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
N EME + D ++YS+LI+ C++ A+ L +EM KG + TY SL+
Sbjct: 309 CYNFMVKEME-PRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
+ + A L +M + G+ PD + Y ++D LCK G + A VF D++
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT 427
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+YN +I+GLC+ G EA+ L +M+ K C PD +TF+ II L A K+
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 491 LREMMARGL 499
+MM +G
Sbjct: 488 WDQMMDKGF 496
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 208/402 (51%), Gaps = 3/402 (0%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G+ PD + LC + +V A+Q +V RG + VSY LI GL R G+ +
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV-VKKVSPDVVTYNSLLY 196
+++ + V P+ ++ LC + V A+ + +E + +V V YN+L+
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
GFC G++++A L M++ PD++T+N L++ +K A+ V+A M++ G++
Sbjct: 229 GFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQL 288
Query: 257 DLFTYNSLMDGYCLVNEINKAIAIL-NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
D ++YN L+ +C V+ +K + M RG +V SYS +I C+ +A L
Sbjct: 289 DAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRL 347
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
F EM ++ + +TY+SLI + G S A +L+D+M G D+ Y ++LD LCK
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
S +VDKA + M + I PD ++YN L+ GLC+ GR+ A ++F+D+ K T
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELT 467
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+ +I GL + A + +M DKG D +T+I A
Sbjct: 468 FKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 188/372 (50%), Gaps = 1/372 (0%)
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQ 133
++++G PD V+ T LI GL G+V A++ + ++ G + + L+ GLC +
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 134 TRASLQLL-RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+ +++ +++ VK + V+YN +I CK + A L S M PD+VTYN
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
LL + LK A ++ EM R I D ++N L+ + + + N + M+
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
D+ +Y++L++ +C + KA + M Q+G+ NV +Y+ +I + A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
L +M + + PD I Y++++D LCKSG + A+ + ++M D +YNSL+
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG 439
Query: 373 LCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
LC+S V +AI L + M+ + PD +T+ ++ GL + +L A +V+ ++ KG+ +
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Query: 433 VRTYNIMINGLC 444
+ +I C
Sbjct: 500 RDVSDTLIKASC 511
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 165/347 (47%), Gaps = 3/347 (0%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
Y + I +L K ++ +A +F EM YN + + + A + +M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
T++ + L K +L+ M G PD++ +N +D C N++
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
A+ M QRG P+V SY+I+I+GL + V +A+ ++ M + PD ++L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 336 DGLCKSGRISHAWELV-DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
GLC + ++ A+E+V +E+ + YN+L+ CK+ ++KA AL M G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
+PD+VTYN+L++ LK A+ V ++V G + +YN ++ C+ D+
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 455 LL-SEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+ EME +G D +++ T+I + KA +L EM +G++
Sbjct: 312 FMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMV 357
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 3/285 (1%)
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
+ +G + + + + L K G + A V M + F YN + +
Sbjct: 3 QTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFEL 62
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
A AI M G + +YS I GLCK K D L ++ME + IPD ++ +D
Sbjct: 63 AEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLD 122
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
LC+ ++ A + M +G+ D +Y L++ L ++ V A+ + M G+ P
Sbjct: 123 LLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSP 182
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT--YNIMINGLCKEGLFDEALA 454
D L+ GLC ++ A E+ + IK V + T YN +I+G CK G ++A A
Sbjct: 183 DNKACAALVVGLCHARKVDLAYEMVAE-EIKSARVKLSTVVYNALISGFCKAGRIEKAEA 241
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
L S M GC PD +T+ ++ ++ +AE ++ EM+ G+
Sbjct: 242 LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A+ + ++ +KG + VT T+LIK +G A + D + G +++ Y T++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
LC+ G + + + H + P+ + YN++I LC+ V++A LF +M K+ P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
D +T+ ++ G +L A ++ D+M K D +TL+ A
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%)
Query: 45 IFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ 104
+ N + TS + + G A +L ++ + G PD + TT++ LC G V +A
Sbjct: 357 VMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYG 416
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
+D++ + +SY +LI GLCR G+ +++L ++G P+ + + II L
Sbjct: 417 VFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLI 476
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
+ K +S A+ ++ +M+ K + D ++L+ C
Sbjct: 477 RGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 197/343 (57%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G + V+ +L+ G C + ++ + Q+E +K +VV+ +ID+LCK++LV A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
+ M + +SP+VVTY+SL+ G C G+L +A L EM K I P+VITF+ L+DA
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
K G + + +V +M++ + P++FTY+SL+ G C+ N +++AI +L+ M +G TPN
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
V +YS + +G K+ VD+ + L +M + +T++ ++LI G ++G+I A +
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M + G + +YN +L L + V+KA++ + M+ D++TY I++ G+CK
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
+K A ++F L K + Y IMI L + G+ EA AL
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 184/340 (54%)
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
K++K G PD VT ++L+ G CL ++ A+ + G + + V LI LC+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+L++L++++ + PNVV Y+++I LCK ++DA EM KK++P+V+T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
+L+ + G+L + + M + +I P+V T+++L+ L V EA +L +M+ +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
G P++ TY++L +G+ + ++ I +L+ M QRGV N S + +I G + +D A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
L +F M +IP+ +Y+ ++ GL +G + A + M D TY ++
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 373 LCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
+CK+ V +A L K++ + ++PD Y I++ L + G
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 183/344 (53%)
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
++P++V +++++ C + DA + +M + DVV L+ C + A
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
E+L M + I P+V+T+++L+ L K G + +A+ L M + + P++ T+++L+D Y
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
+++K ++ M Q + PNV +YS +I+GLC + VDEA+ + M P+
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 188
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
+TYS+L +G KS R+ +L+D+M +G A+ + N+L+ ++ +D A+ +
Sbjct: 189 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 248
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
M G+ P++ +YNI++ GL G ++ A F+ + + + TY IMI+G+CK +
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 308
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLR 492
EA L +++ K PD + +I L G +A+ L R
Sbjct: 309 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 176/325 (54%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
I A V G++ K G + D V T LI LC V AL+ + RG N V+Y
Sbjct: 28 SIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 87
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
+LI GLC+ G+ + + L +++ + PNV+ ++ +ID+ K +S +++ M+
Sbjct: 88 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQM 147
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ P+V TY+SL+YG C+ ++ EA ++LD M K P+V+T++TL + K V +
Sbjct: 148 SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDG 207
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+L M ++GV + + N+L+ GY +I+ A+ + M G+ PN+ SY+I++ G
Sbjct: 208 IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 267
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
L N V++AL+ F M+ + D ITY+ +I G+CK+ + A++L ++ K D
Sbjct: 268 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 327
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTK 387
Y ++ L ++ +A AL +
Sbjct: 328 FKAYTIMIAELNRAGMRTEADALNR 352
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 145/275 (52%)
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
+M + I PD++T ++LV+ ++K+A V M K G+K D+ L+D C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
+ A+ +L M RG++PNV +YS +I GLCK+ + +A EM+ KI P+ IT+S
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
+LID K G++S + M + FTY+SL+ LC + VD+AI + M +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
G P+VVTY+ L +G K R+ + ++ D+ +G + N +I G + G D A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKA 487
L + M G IP+ ++ ++ LF G+ KA
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 140/252 (55%)
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
MMK G++PD+ T +SL++G+CL N I A+ + M + G+ +V +I+I LCKN++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
V AL + M+ I P+ +TYSSLI GLCKSGR++ A + EM +K + T+++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
L+D K + K ++ K M I P+V TY+ L+ GLC R+ A ++ ++ KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE 488
V TY+ + NG K D+ + LL +M +G + ++ T+I F+ G A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 489 KLLREMMARGLL 500
+ M + GL+
Sbjct: 244 GVFGYMTSNGLI 255
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 35/217 (16%)
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
+M + I PD +T SSL++G C S I A + +M G D L+D LCK+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE------------------ 419
V A+ + K+M+D+GI P+VVTY+ L+ GLCK GRL +A+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 420 -----------------VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
V++ ++ V TY+ +I GLC DEA+ +L M K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 463 GCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
GC P+ +T+ T+ F+ KLL +M RG+
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 134/289 (46%), Gaps = 12/289 (4%)
Query: 42 AISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
A+ + R+ +P+++ + G++ A L ++ K P+ +T + LI
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
+G++ + + ++ N +Y +LI GLC + ++++L + P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
NVV Y+T+ + K V D L +M + V+ + V+ N+L+ G+ G++ A +
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
MT + P++ ++N ++ L G V++A + M K D+ TY ++ G C
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE--ALNLFAE 318
+ +A + + + V P+ +Y+I+I L + M E ALN F +
Sbjct: 307 CMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQ 355
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 36 IHN-ADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLC 94
+HN D+AI + + ++ TP+++ + +TL G
Sbjct: 165 MHNRVDEAIKMLDLMISKGCTPNVVTY-------------------------STLANGFF 199
Query: 95 LKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV 154
V ++ DD+ RG N VS TLIKG + G+ +L + + + + PN+
Sbjct: 200 KSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIR 259
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
YN ++ L + V A + F M + D++TY +++G C +KEA +L ++
Sbjct: 260 SYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL 319
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEA 242
K + PD + ++ L + G EA
Sbjct: 320 KFKRVEPDFKAYTIMIAELNRAGMRTEA 347
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 231/449 (51%), Gaps = 12/449 (2%)
Query: 42 AISIFNRLLGTSPTPS----------IIEFGQIPSAFSVLGKILKKG-YRPDAVTLTTLI 90
A+S+F + G P+ +++ GQ V ++ +G PD +T + LI
Sbjct: 181 ALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALI 240
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
G A++ D++ + + Y TL+ ++G+ +L L +++
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS 300
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P V Y +I L K V +A+ + +M+ ++PDVV N+L+ VG+++E T +
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNV 360
Query: 211 LDEMTRKNIGPDVITFNTLVDALGK-EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
EM P V+++NT++ AL + + +V E + M V P FTY+ L+DGYC
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
N + KA+ +L M ++G P +Y +I+ L K K + A LF E++ +
Sbjct: 421 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR 480
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
Y+ +I K G++S A +L +EM N+G D + YN+L+ + K+ +++A +L +KM
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ G + D+ ++NI+++G + G + A E+F+ + G TYN ++ G+F
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 450 DEALALLSEMEDKGCIPDAITFETIICAL 478
+EA ++ EM+DKG DAIT+ +I+ A+
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 216/441 (48%), Gaps = 8/441 (1%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL-NQVSYG 122
+ A SV + + +P + T ++I L +G+ + + + ++ G + ++Y
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
LI ++G+ ++++L +++ + ++P +Y T++ K V A +LF EM
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
SP V TY L+ G G++ EA +M R + PDV+ N L++ LGK G V+E
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 243 KNVLAVMMKQGVKPDLFTYNS----LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
NV + M P + +YN+ L + V+E++ + + M V+P+ +YSI
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS---SWFDKMKADSVSPSEFTYSI 414
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I G CK V++AL L EM+ P Y SLI+ L K+ R A EL E+
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
Y ++ K + +A+ L +M++QG PDV YN LM G+ K G + A
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
+ + + G + ++NI++NG + G+ A+ + ++ G PD +T+ T++
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 479 FEKGDNYKAEKLLREMMARGL 499
G +A +++REM +G
Sbjct: 595 AHAGMFEEAARMMREMKDKGF 615
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 206/427 (48%), Gaps = 42/427 (9%)
Query: 112 RGFRLNQVSYGTLIKGL--CRM-GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
R F+ + +Y TLI+ L R+ G+ ++Q + + V P V+ + ++ +L + K+
Sbjct: 120 RNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVL--SELVKALGRAKM 177
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK-NIGPDVITFN 227
VS A ++F + +K P TYNS++ GQ ++ E+ EM + + PD IT++
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
L+ + K G A + M ++P Y +L+ Y V ++ KA+ + M +
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEAL---------------------------------- 313
G +P V++Y+ +I GL K VDEA
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 314 -NLFAEMECIKIIPDTITYSSLIDGLCKS-GRISHAWELVDEMHNKGQPADKFTYNSLLD 371
N+F+EM + P ++Y+++I L +S +S D+M +FTY+ L+D
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
CK++ V+KA+ L ++M ++G P Y L++ L K R + A E+F++L +V
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
+ R Y +MI K G EA+ L +EM+++G PD + ++ + + G +A LL
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLL 537
Query: 492 REMMARG 498
R+M G
Sbjct: 538 RKMEENG 544
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 189/380 (49%), Gaps = 11/380 (2%)
Query: 40 DDAISIFNRLLGT--SPTPSI--------IEFGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
D AI +F+ + PT I + G++ A + ++ + G P T T L
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
IKGL G V A F+ D++ G + V L+ L ++G+ + ++
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 150 KPNVVMYNTIIDSLCKDKL-VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
P VV YNT+I +L + K VS+ + F +M VSP TY+ L+ G+C ++++A
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
LL+EM K P + +L++ALGK + A + + + Y ++ +
Sbjct: 430 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHF 489
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
++++A+ + N M +G P+V++Y+ ++ G+ K M++EA +L +ME D
Sbjct: 490 GKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADI 549
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
+++ +++G ++G A E+ + + + G D TYN+LL + ++A + ++
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 389 MRDQGIQPDVVTYNILMDGL 408
M+D+G + D +TY+ ++D +
Sbjct: 610 MKDKGFEYDAITYSSILDAV 629
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVT-----------------LTTLIKGLCLKGEVRRAL 103
F P+A+ L L K R +A +IK G++ A+
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
+++ +G + +Y L+ G+ + G + LLR++E + + ++ +N I++
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGF 559
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
+ + A +F + + PD VTYN+LL F G +EA ++ EM K D
Sbjct: 560 ARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDA 619
Query: 224 ITFNTLVDALG 234
IT+++++DA+G
Sbjct: 620 ITYSSILDAVG 630
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 222/438 (50%), Gaps = 2/438 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
GQ+ A VL + + G P+ + T I + +AL+F + + G N V+Y
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+I+G C + + +++LL + P+ V Y TI+ LCK+K + + +L +M
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 182 KK-VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
+ + PD VTYN+L++ EA L + K D + ++ +V AL KEG +
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 241 EAKNVLAVMMKQG-VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
EAK+++ M+ +G PD+ TY ++++G+C + E++KA +L M G PN SY+ +
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
++G+C+ EA + E P++ITYS ++ GL + G++S A ++V EM KG
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
N LL LC+ +A ++ ++G +VV + ++ G C+ L A
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
V D+ + H V TY +++ L K+G EA L+ +M KG P +T+ T+I
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 675
Query: 480 EKGDNYKAEKLLREMMAR 497
+ G +L +M++R
Sbjct: 676 QMGKVDDLVAILEKMISR 693
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 202/369 (54%), Gaps = 8/369 (2%)
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
RG ++ ++ R GQ R +L++L ++ V+PN+++ NT ID + +
Sbjct: 236 RGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEK 295
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A M V + P+VVTYN ++ G+C + +++EA ELL++M K PD +++ T++
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Query: 232 ALGKEGNVKEAKNVLAVMMKQ-GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
L KE + E ++++ M K+ G+ PD TYN+L+ + ++A+ L ++G
Sbjct: 356 YLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEM----ECIKIIPDTITYSSLIDGLCKSGRISH 346
+ YS I+H LCK + EA +L EM C PD +TY+++++G C+ G +
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHC---PPDVVTYTAVVNGFCRLGEVDK 472
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A +L+ MH G + +Y +LL+ +C++ +A + + P+ +TY+++M
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
GL +EG+L A +V +++V+KG+ N+++ LC++G EA + E +KGC
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 467 DAITFETII 475
+ + F T+I
Sbjct: 593 NVVNFTTVI 601
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 229/476 (48%), Gaps = 16/476 (3%)
Query: 36 IHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKK-GYRPDAV 84
+H ++AI + + P + + +I ++ K+ K+ G PD V
Sbjct: 325 LHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T TLI L AL F D +GFR++++ Y ++ LC+ G+ + L+ ++
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 145 --EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVG 202
+GH P+VV Y +++ C+ V A L M P+ V+Y +LL G C G
Sbjct: 445 LSKGH-CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
+ EA E+++ P+ IT++ ++ L +EG + EA +V+ M+ +G P N
Sbjct: 504 KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEIN 563
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
L+ C ++A + +G NV +++ +IHG C+N +D AL++ +M I
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI 623
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
D TY++L+D L K GRI+ A EL+ +M +KG TY +++ C+ VD
Sbjct: 624 NKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDL 683
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
+A+ +KM + Q YN +++ LC G+L+ A + ++ +T ++ G
Sbjct: 684 VAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEG 741
Query: 443 LCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
K+G+ A + M ++ IPD E + L KG +A+KL+ ++ RG
Sbjct: 742 YLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 216/415 (52%), Gaps = 2/415 (0%)
Query: 47 NRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFH 106
N L+ + + ++ A L ++ G P+ VT +I+G C V A++
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 107 DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV-EGHLVKPNVVMYNTIIDSLCK 165
+D+ ++G ++VSY T++ LC+ + L++++ + H + P+ V YNT+I L K
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 166 DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK-NIGPDVI 224
+A + K D + Y+++++ C G++ EA +L++EM K + PDV+
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
T+ +V+ + G V +AK +L VM G KP+ +Y +L++G C + +A ++N
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
+ +PN +YS+I+HGL + + EA ++ EM P + + L+ LC+ GR
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRT 575
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
A + ++E NKG + + +++ C++ +D A+++ M DV TY L
Sbjct: 576 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 635
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
+D L K+GR+ A E+ + ++ KG T TY +I+ C+ G D+ +A+L +M
Sbjct: 636 VDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 185/349 (53%), Gaps = 2/349 (0%)
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
++Y ++++ L K KL + + M + + ++ ++ + GQL++A ++L
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
M R + P+++ NT +D + +++A L M G+ P++ TYN ++ GYC ++
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYS 332
+ +AI +L M +G P+ SY I+ LCK K + E +L +M + ++PD +TY+
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
+LI L K A + + KG DK Y++++ LCK + +A L +M +
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 393 G-IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
G PDVVTY +++G C+ G + A+++ Q + G+ +Y ++NG+C+ G E
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
A +++ E+ P++IT+ I+ L +G +A ++REM+ +G
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 556
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 199/387 (51%), Gaps = 2/387 (0%)
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
+R + + Y ++++ L + + S ++L ++ + ++ ++ S + + DA
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
+ + M V P+++ N+ + F +L++A L+ M I P+V+T+N ++
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPN 292
V+EA +L M +G PD +Y ++M C I + ++ MA + G+ P+
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+Y+ +IH L K+ DEAL + + D + YS+++ LCK GR+S A +L++
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLIN 442
Query: 353 EMHNKGQ-PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
EM +KG P D TY ++++ C+ VDKA L + M G +P+ V+Y L++G+C+
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 502
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
G+ A+E+ + TY+++++GL +EG EA ++ EM KG P +
Sbjct: 503 GKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI 562
Query: 472 ETIICALFEKGDNYKAEKLLREMMARG 498
++ +L G ++A K + E + +G
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKG 589
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 218/421 (51%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ A ++ + + P + + L++GL ++ +A+ +V G + ++Y
Sbjct: 118 GKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITY 177
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+I LC+ G R +L LL + P+V+ YNT+I + A + + +
Sbjct: 178 NMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQ 237
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
P ++TY L+ C A E+L++M + PD++T+N+LV+ + GN++E
Sbjct: 238 NGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEE 297
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+V+ ++ G++ + TYN+L+ C ++ ILN M Q P V +Y+I+I+
Sbjct: 298 VASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
GLCK +++ A++ F +M K +PD +TY++++ + K G + A EL+ + N P
Sbjct: 358 GLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPP 417
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
TYNS++D L K + KA+ L +M D GI PD +T L+ G C+ ++ A +V
Sbjct: 418 GLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVL 477
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
++ +G + TY ++I GLCK+ + A+ ++ M GC PD + I+ + E
Sbjct: 478 KETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEM 537
Query: 482 G 482
G
Sbjct: 538 G 538
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 188/375 (50%)
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
++ LC G+ + +L+ + H P+ + ++ L + + A + MV+
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
PD +TYN ++ C G ++ A LL++M+ PDVIT+NT++ + GN ++A
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
++ G P + TY L++ C +AI +L MA G P++ +Y+ +++
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
C+ ++E ++ + + +T+TY++L+ LC E+++ M+
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTV 349
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
TYN L++ LCK+ + +AI +M +Q PD+VTYN ++ + KEG + +A E+
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGL 409
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
L + TYN +I+GL K+GL +AL L +M D G PD IT ++I
Sbjct: 410 LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANL 469
Query: 484 NYKAEKLLREMMARG 498
+A ++L+E RG
Sbjct: 470 VEEAGQVLKETSNRG 484
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 185/370 (50%), Gaps = 4/370 (1%)
Query: 135 RASLQLLRQV----EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT 190
RA ++ ++Q +G + + + N I+ +LC + ++DA L M P +
Sbjct: 82 RARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPS 141
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
++L+ G + QL +A +L M PD IT+N ++ L K+G+++ A +L M
Sbjct: 142 CSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMS 201
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
G PD+ TYN+++ +AI Q G P + +Y++++ +C+
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
A+ + +M PD +TY+SL++ C+ G + ++ + + G + TYN+LL
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
LC + D+ + M P V+TYNIL++GLCK L A + F ++ +
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+ TYN ++ + KEG+ D+A+ LL +++ C P IT+ ++I L +KG KA +L
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 491 LREMMARGLL 500
+M+ G+
Sbjct: 442 YHQMLDAGIF 451
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ ++G A L+ G P +T T L++ +C RA++ +D+ G +
Sbjct: 219 MFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
V+Y +L+ CR G +++ + H ++ N V YNT++ SLC + + + +
Sbjct: 279 IVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILN 338
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
M P V+TYN L+ G C L A + +M + PD++T+NT++ A+ KEG
Sbjct: 339 IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
V +A +L ++ P L TYNS++DG + KA+ + + M G+ P+ +
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
+I+G C+ +V+EA + E TY +I GLCK I A E+V+ M
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG 518
Query: 358 GQPADKFTYNSLL 370
G D+ Y +++
Sbjct: 519 GCKPDETIYTAIV 531
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 205/418 (49%), Gaps = 6/418 (1%)
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
+++++ LCL+G++ AL ++ G +++ L+ GLC+ G + L+R++
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL-- 204
PN V YNT+I LC V A LF+ M + P+ VT N +++ C G +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 205 ---KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
K E+LD ++ N D++ L+D+ K GNV +A V M ++ V D Y
Sbjct: 245 NNKKLLEEILDS-SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N ++ G C + A + M +RGV P+V +Y+ +I LCK DEA +L M+
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
+ PD I+Y +I GLC G ++ A E + M + +N ++D +
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
A+++ M G++P+V T N L+ G K GRL +A V ++ H TYN+++
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
C G A L EM +GC PD IT+ ++ L KG KAE LL + A G+
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 213/414 (51%), Gaps = 4/414 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ +A + K++ G P +T L+ GLC G + +A ++ G N VSY
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
TLIKGLC + +L L + + ++PN V N I+ +LC+ ++ + E ++
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 182 ---KKVSPDVVTYNSLLYGFCIV-GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
+ +P + ++L C G + +A E+ EM++KN+ D + +N ++ L G
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
N+ A + M+K+GV PD+FTYN+L+ C + ++A + +M GV P+ SY
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
+II GLC + V+ A M ++P+ + ++ +IDG + G S A +++ M +
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSY 434
Query: 358 GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
G + +T N+L+ K + A + +MR I PD TYN+L+ C G L+ A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
+++ +++ +G + TY ++ GLC +G +A +LLS ++ G D + F
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 194/410 (47%), Gaps = 44/410 (10%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G I A ++ ++ + G P+ V+ TLIKGLC V +AL + + G R N+V+
Sbjct: 170 GYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTC 229
Query: 122 GTLIKGLCRMG-----------------QTRA----------------------SLQLLR 142
++ LC+ G Q A +L++ +
Sbjct: 230 NIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWK 289
Query: 143 QVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVG 202
++ V + V+YN II LC + A+ +MV + V+PDV TYN+L+ C G
Sbjct: 290 EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
+ EA +L M + PD I++ ++ L G+V A L M+K + P++ +N
Sbjct: 350 KFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWN 409
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
++DGY + + A+++LN M GV PNV++ + +IHG K + +A + EM
Sbjct: 410 VVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRST 469
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
KI PDT TY+ L+ C G + A++L DEM +G D TY L+ LC + KA
Sbjct: 470 KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKA 529
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
+L +++ GI D V + IL K RL+ E + LV K + T
Sbjct: 530 ESLLSRIQATGITIDHVPFLILAK---KYTRLQRPGEAY--LVYKKWLAT 574
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
++S++ LC +D A+ L KKM G+ P ++T+N L++GLCK G ++ A + +++
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK---G 482
G +YN +I GLC D+AL L + M G P+ +T I+ AL +K G
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 483 DNYKAEKLLREMM 495
+N K KLL E++
Sbjct: 244 NNNK--KLLEEIL 254
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 221/445 (49%), Gaps = 10/445 (2%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
++ G V ++KKG D + + + + L+ +V G ++
Sbjct: 165 VDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITV 224
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
S +++GLCR G+ S +L+++ +KP YNTII++ K + S E
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV-----E 279
Query: 179 MVVKKVSPDVVTYNSLLYGFCIV-----GQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
V+K + D V YN + Y + G++ +A +L DEM + I DV + +L+
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
++GN+K A + + ++G+ P +TY +L+DG C V E+ A ++N M +GV
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
++ +I G C+ MVDEA ++ ME D T +++ + R A + +
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M G +Y +L+DV CK +V++A L +M +G+QP+ +TYN+++ CK+G+
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
+K A+++ ++ G TY +I+G C DEA+ L SEM KG +++T+
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 474 IICALFEKGDNYKAEKLLREMMARG 498
+I L + G + +A L EM +G
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 202/416 (48%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+I + +++ G + +LT +++GLC +GEV ++ + + +G + +Y
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
T+I + +L+ ++ V N V Y +++ K+ +SDA LF EM +
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ DV Y SL+ C G +K A L DE+T K + P T+ L+D + K G + A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ ++ M +GV +N+L+DGYC +++A I + M Q+G +V + + I
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
+ K DEA M + T++Y++LID CK G + A L EM +KG +
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
TYN ++ CK + +A L M G+ PD TY L+ G C + A +F
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
++ +KG TY +MI+GL K G DEA L EM+ KG D + +I ++
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 177/326 (54%)
Query: 45 IFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ 104
++N++ T ++ G++ A + ++ ++G D T+LI C KG ++RA
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
D++ +G + +YG LI G+C++G+ A+ L+ +++ V V++NT+ID C
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
+ +V +A ++ M K DV T N++ F + + EA + L M + +
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
++ L+D KEGNV+EAK + M +GV+P+ TYN ++ YC +I +A + +M
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
G+ P+ ++Y+ +IHG C VDEA+ LF+EM + +++TY+ +I GL K+G+
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLL 370
A+ L DEM KG D Y +L+
Sbjct: 591 DEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 197/382 (51%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ + ++ + KG +P+A T T+I + + + G N+V+Y
Sbjct: 238 GEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTY 297
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
L++ + G+ + +L ++ ++ +V +Y ++I C+ + AF LF E+
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTE 357
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
K +SP TY +L+ G C VG++ A L++EM K + + FNTL+D ++G V E
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A + VM ++G + D+FT N++ + + ++A L M + GV + SY+ +I
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
CK V+EA LF EM + P+ ITY+ +I CK G+I A +L M G
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D +TY SL+ C + +VD+A+ L +M +G+ + VTY +++ GL K G+ A ++
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Query: 422 QDLVIKGYHVTVRTYNIMINGL 443
++ KGY + + Y +I +
Sbjct: 598 DEMKRKGYTIDNKVYTALIGSM 619
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 174/335 (51%)
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
K + + +F MV V V + ++ G C G+++++ +L+ E + K I P+
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
T+NT+++A K+ + + VL VM K GV + TY LM+ +++ A + + M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
+RG+ +VH Y+ +I C+ + A LF E+ + P + TY +LIDG+CK G +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
A L++EM +KG + +N+L+D C+ VD+A + M +G Q DV T N +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGC 464
+ R A++ ++ G ++ +Y +I+ CKEG +EA L EM KG
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 465 IPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
P+AIT+ +I A ++G +A KL M A G+
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 118/226 (52%), Gaps = 4/226 (1%)
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM--ECIKIIPDTITYSS 333
+ + + + M ++G++ + S + + K + +D L +F M +KI ++T
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI-- 229
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
+++GLC+ G + + +L+ E KG + +TYN++++ K + K M+ G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
+ + VTY +LM+ K G++ +A+++F ++ +G V Y +I+ C++G A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
L E+ +KG P + T+ +I + + G+ AE L+ EM ++G+
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%)
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVT 400
+G + D M KG D+ + L K +D + + ++M D G++ V +
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 401 YNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME 460
I+++GLC+ G ++ ++++ ++ +KG TYN +IN K+ F +L M+
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 461 DKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G + + +T+ ++ + G AEKL EM RG+
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%)
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
M +G+ D + + + K R+ E+F+ +V G +TV + I++ GLC+ G
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+++ L+ E KG P+A T+ TII A ++ D E +L+ M G++
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 211/419 (50%), Gaps = 6/419 (1%)
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
T++ G + + ++ L + GF V+YG LI ++G+ +L++ R ++
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE 513
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
VK N+ Y+ +I+ K K ++AF +F +MV + + PDV+ YN+++ FC +G + A
Sbjct: 514 GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+ + EM + P TF ++ K G+++ + V +M + G P + T+N L++G
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
++ KA+ IL+ M GV+ N H+Y+ I+ G +A F ++ + D
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
TY +L+ CKSGR+ A + EM + P + F YN L+D + V +A L +
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
+M+ +G++PD+ TY + K G + A + +++ G ++TY +I G +
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE------KLLREMMARGLL 500
L ++AL+ EM+ G PD + ++ +L + +A + +EM+ GL+
Sbjct: 814 LPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLI 872
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 229/533 (42%), Gaps = 49/533 (9%)
Query: 16 LNNFPVVSKPSFHSHSLSPSIH----NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSV- 70
++ F +SKPS L + + A F R+ TP+ + + A++V
Sbjct: 298 ISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVG 357
Query: 71 ---------LGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
+ K+ ++G VT + ++ G G A + D+ LN Y
Sbjct: 358 RDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIY 417
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
G +I C+ + L+R++E + + +Y+T++D +F +
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATEL------------------------------- 210
+P VVTY L+ + VG++ +A E+
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 211 ----LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
++M ++ + PDVI +N ++ A GN+ A + M K +P T+ ++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
GY ++ +++ + + M + G P VH+++ +I+GL + + +++A+ + EM +
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
+ TY+ ++ G G A+E + N+G D FTY +LL CKS + A+A+T
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
K+M + I + YNIL+DG + G + A ++ Q + +G + TY I+ K
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G + A + EME G P+ T+ T+I KA EM A G+
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 191/422 (45%), Gaps = 9/422 (2%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
V ++ + G+ P VT LI G++ +AL+ + G + N +Y +I G
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
++ + + + +KP+V++YN II + C + A EM + P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
T+ +++G+ G ++ + E+ D M R P V TFN L++ L ++ +++A +L M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
GV + TY +M GY V + KA + G+ ++ +Y ++ CK+ +
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
AL + EM I ++ Y+ LIDG + G + A +L+ +M +G D TY S
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
+ K+ +++A ++M G++P++ TY L+ G + + A ++++ G
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 430 HVTVRTYNIMINGLCKEGLFDEA------LALLSEMEDKGCIPD---AITFETIICALFE 480
Y+ ++ L EA + + EM + G I D A+ + +C +
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEA 890
Query: 481 KG 482
G
Sbjct: 891 SG 892
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 181/383 (47%), Gaps = 10/383 (2%)
Query: 45 IFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK----------KGYRPDAVTLTTLIKGLC 94
+F RL TP+++ +G + + ++ +GKI K +G + + T + +I G
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 95 LKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV 154
+ A +D+V G + + + Y +I C MG ++Q +++++ +P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+ II K + + +F M P V T+N L+ G Q+++A E+LDEM
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
T + + T+ ++ G+ +A + +G+ D+FTY +L+ C +
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
A+A+ M+ R + N Y+I+I G + V EA +L +M+ + PD TY+S
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I K+G ++ A + ++EM G + TY +L+ ++ +KA++ ++M+ GI
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 395 QPDVVTYNILMDGLCKEGRLKNA 417
+PD Y+ L+ L + A
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEA 853
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 222/476 (46%), Gaps = 49/476 (10%)
Query: 69 SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
+++ + G P++V LT I LC A D++ L + L+ L
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK----- 183
R L+ +++ ++P+VV +I++LCK + V +A +F +M K+
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGN 364
Query: 184 -VSPDVVTYNSLLYGFCIVGQLKEATELLDEMT-RKNIGPDVITFNTLVDALGKEGNVKE 241
+ D + +N+L+ G C VG+LKEA ELL M + P+ +T+N L+D + G ++
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLET 424
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
AK V++ M + +KP++ T N+++ G C + +N A+ M + GV NV +Y +IH
Sbjct: 425 AKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIH 484
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA-------------- 347
C V++A+ + +M PD Y +LI GLC+ R A
Sbjct: 485 ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 348 ---------------------WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
+E++ +M +G+ D TYN+L+ K + +
Sbjct: 545 DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR----TYNIMING 442
++MR+ G+ P V TY ++D C G L A ++F+D+ G H V YNI+IN
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM---GLHSKVNPNTVIYNILINA 661
Query: 443 LCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
K G F +AL+L EM+ K P+ T+ + L EK KL+ EM+ +
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 201/406 (49%), Gaps = 12/406 (2%)
Query: 80 RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN--------QVSYGTLIKGLCRM 131
RPD VTL LI LC V AL+ + + RG R + + + TLI GLC++
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 132 GQTRASLQLLRQVE-GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT 190
G+ + + +LL +++ PN V YN +ID C+ + A + S M ++ P+VVT
Sbjct: 384 GRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
N+++ G C L A +M ++ + +V+T+ TL+ A NV++A M+
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+ G PD Y +L+ G C V + AI ++ + + G + ++ +Y+++I C +
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTE 563
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
+ + +ME PD+ITY++LI K ++++M G TY +++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 371 DVLCKSHHVDKAIALTKKMR-DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
D C +D+A+ L K M + P+ V YNIL++ K G A + +++ +K
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
V TYN + L ++ + L L+ EM ++ C P+ IT E ++
Sbjct: 684 RPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 184/369 (49%), Gaps = 7/369 (1%)
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+ L+ + H V PN V I SLCK+ + A+++ S+++ K + +N+LL
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG---- 253
+ +L+ +M I PDV+T L++ L K V EA V M +
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 254 --VKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPNVHSYSIIIHGLCKNKMVD 310
+K D +N+L+DG C V + +A +L M + PN +Y+ +I G C+ ++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
A + + M+ +I P+ +T ++++ G+C+ ++ A +M +G + TY +L+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
C +V+KA+ +KM + G PD Y L+ GLC+ R +A V + L G+
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+ + YN++I C + ++ +L++ME +G PD+IT+ T+I + D E++
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 491 LREMMARGL 499
+ +M GL
Sbjct: 604 MEQMREDGL 612
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 207/410 (50%), Gaps = 13/410 (3%)
Query: 101 RALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTII 160
+ L+ ++ + L V+ LI+ RMG S+ + +++ ++ N + N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNM--KNSQVRNVVV 192
Query: 161 DSLCKDKLVSDAFNLFSEMVVKK--VSPDVVTYNSLLYGFCIVGQLKEAT--ELLDEMTR 216
D L ++ LV DAF + EM+ K+ P+ +T + +L+ L E L+ +
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSS 252
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
+ P+ + + +L K A ++L+ +MK + +N+L+ +I++
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK------IIPDTIT 330
++ M + + P+V + I+I+ LCK++ VDEAL +F +M + I D+I
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH 372
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPA-DKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+++LIDGLCK GR+ A EL+ M + + A + TYN L+D C++ ++ A + +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
++ I+P+VVT N ++ G+C+ L A F D+ +G V TY +I+ C
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
++A+ +M + GC PDA + +I L + ++ A +++ ++ G
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 35 SIHNADDAISIFNRLL--GTSPTPSII--------EFGQIPSAFSVLGKILKKGYRPDAV 84
S+ N + A+ + ++L G SP I + + A V+ K+ + G+ D +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
LI C K + + D+ G + + ++Y TLI + + +++ Q+
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM-VVKKVSPDVVTYNSLLYGFCIVGQ 203
+ P V Y +ID+ C + +A LF +M + KV+P+ V YN L+ F +G
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+A L +EM K + P+V T+N L L ++ + ++ M++Q +P+ T
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 264 LMD 266
LM+
Sbjct: 728 LME 730
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 221/473 (46%), Gaps = 49/473 (10%)
Query: 69 SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
+++ + G P++V LT I LC A D++ L + L+ L
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK----- 183
R L+ +++ ++P+VV +I++LCK + V +A +F +M K+
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGN 364
Query: 184 -VSPDVVTYNSLLYGFCIVGQLKEATELLDEMT-RKNIGPDVITFNTLVDALGKEGNVKE 241
+ D + +N+L+ G C VG+LKEA ELL M + P+ +T+N L+D + G ++
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLET 424
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
AK V++ M + +KP++ T N+++ G C + +N A+ M + GV NV +Y +IH
Sbjct: 425 AKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIH 484
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA-------------- 347
C V++A+ + +M PD Y +LI GLC+ R A
Sbjct: 485 ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 348 ---------------------WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
+E++ +M +G+ D TYN+L+ K + +
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR----TYNIMING 442
++MR+ G+ P V TY ++D C G L A ++F+D+ G H V YNI+IN
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM---GLHSKVNPNTVIYNILINA 661
Query: 443 LCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
K G F +AL+L EM+ K P+ T+ + L EK KL+ EM+
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 184/369 (49%), Gaps = 7/369 (1%)
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+ L+ + H V PN V I SLCK+ + A+++ S+++ K + +N+LL
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG---- 253
+ +L+ +M I PDV+T L++ L K V EA V M +
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 254 --VKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPNVHSYSIIIHGLCKNKMVD 310
+K D +N+L+DG C V + +A +L M + PN +Y+ +I G C+ ++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
A + + M+ +I P+ +T ++++ G+C+ ++ A +M +G + TY +L+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
C +V+KA+ +KM + G PD Y L+ GLC+ R +A V + L G+
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+ + YN++I C + ++ +L++ME +G PD+IT+ T+I + D E++
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 491 LREMMARGL 499
+ +M GL
Sbjct: 604 MEQMREDGL 612
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 206/410 (50%), Gaps = 13/410 (3%)
Query: 101 RALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTII 160
+ L+ ++ + L V+ LI+ RMG S+ + +++ ++ N + N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNM--KNSQVRNVVV 192
Query: 161 DSLCKDKLVSDAFNLFSEMVVKK--VSPDVVTYNSLLYGFCIVGQLKEAT--ELLDEMTR 216
D L ++ LV DAF + EM+ K+ P+ +T + +L+ L E L+ +
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSS 252
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
+ P+ + + +L K A ++L+ +MK + +N+L+ +I++
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK------IIPDTIT 330
++ M + + P+V + I+I+ LCK++ VDEAL +F +M + I D+I
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQ-PADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+++LIDGLCK GR+ A EL+ M + + + TYN L+D C++ ++ A + +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
++ I+P+VVT N ++ G+C+ L A F D+ +G V TY +I+ C
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
++A+ +M + GC PDA + +I L + ++ A +++ ++ G
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 151/294 (51%), Gaps = 1/294 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ +A V+ ++ + +P+ VT+ T++ G+C + A+ F D+ G + N V+Y
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
TLI C + ++ ++ P+ +Y +I LC+ + DA + ++
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
S D++ YN L+ FC ++ E+L +M ++ PD IT+NTL+ GK + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPNVHSYSIII 300
+ ++ M + G+ P + TY +++D YC V E+++A+ + M V PN Y+I+I
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+ K +AL+L EM+ + P+ TY++L L + + +L+DEM
Sbjct: 660 NAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 116/265 (43%), Gaps = 47/265 (17%)
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+K + + ++ + + + ++I + MV++++ ++ ++ + ++ + +
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLD--SNMKNSQVRNVV 191
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQ--PADKFTYNSLLDVLCKSHHV--DKAIALTKKMR 390
+D L ++G + A++++DEM K P ++ T + +L + K + +K IAL +
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFS 251
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVF----------------------------- 421
G+ P+ V + LCK R A ++
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 422 --QDLVIKGYHVTVR----TYNIMINGLCKEGLFDEALALLSEME----DKGCI--PDAI 469
DLV+K V +R T I+IN LCK DEAL + +M D G + D+I
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 470 TFETIICALFEKGDNYKAEKLLREM 494
F T+I L + G +AE+LL M
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRM 396
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 213/434 (49%), Gaps = 8/434 (1%)
Query: 69 SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
+++ + G P++V LT I LC A D++ L + L+ L
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK----- 183
R L+ +++ ++P+VV +I++LCK + V +A +F +M K+
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGN 364
Query: 184 -VSPDVVTYNSLLYGFCIVGQLKEATELLDEMT-RKNIGPDVITFNTLVDALGKEGNVKE 241
+ D + +N+L+ G C VG+LKEA ELL M + P+ +T+N L+D + G ++
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLET 424
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
AK V++ M + +KP++ T N+++ G C + +N A+ M + GV NV +Y +IH
Sbjct: 425 AKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIH 484
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
C V++A+ + +M PD Y +LI GLC+ R A +V+++ G
Sbjct: 485 ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D YN L+ + C ++ +K + M +G +PD +TYN L+ K ++ + +
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI-PDAITFETIICALFE 480
+ + G TV TY +I+ C G DEAL L +M + P+ + + +I A +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 481 KGDNYKAEKLLREM 494
G+ +A L EM
Sbjct: 665 LGNFGQALSLKEEM 678
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 202/407 (49%), Gaps = 14/407 (3%)
Query: 80 RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN--------QVSYGTLIKGLCRM 131
RPD VTL LI LC V AL+ + + RG R + + + TLI GLC++
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 132 GQTRASLQLL--RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
G+ + + +LL ++E V PN V YN +ID C+ + A + S M ++ P+VV
Sbjct: 384 GRLKEAEELLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
T N+++ G C L A +M ++ + +V+T+ TL+ A NV++A M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
++ G PD Y +L+ G C V + AI ++ + + G + ++ +Y+++I C
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNA 562
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
++ + +ME PD+ITY++LI K ++++M G TY ++
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 370 LDVLCKSHHVDKAIALTKKMR-DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
+D C +D+A+ L K M + P+ V YNIL++ K G A + +++ +K
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
V TYN + L ++ + L L+ EM ++ C P+ IT E ++
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 184/369 (49%), Gaps = 7/369 (1%)
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+ L+ + H V PN V I SLCK+ + A+++ S+++ K + +N+LL
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG---- 253
+ +L+ +M I PDV+T L++ L K V EA V M +
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 254 --VKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPNVHSYSIIIHGLCKNKMVD 310
+K D +N+L+DG C V + +A +L M + PN +Y+ +I G C+ ++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
A + + M+ +I P+ +T ++++ G+C+ ++ A +M +G + TY +L+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
C +V+KA+ +KM + G PD Y L+ GLC+ R +A V + L G+
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+ + YN++I C + ++ +L++ME +G PD+IT+ T+I + D E++
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 491 LREMMARGL 499
+ +M GL
Sbjct: 604 MEQMREDGL 612
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 206/410 (50%), Gaps = 13/410 (3%)
Query: 101 RALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTII 160
+ L+ ++ + L V+ LI+ RMG S+ + +++ ++ N + N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNM--KNSQVRNVVV 192
Query: 161 DSLCKDKLVSDAFNLFSEMVVKK--VSPDVVTYNSLLYGFCIVGQLKEAT--ELLDEMTR 216
D L ++ LV DAF + EM+ K+ P+ +T + +L+ L E L+ +
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSS 252
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
+ P+ + + +L K A ++L+ +MK + +N+L+ +I++
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK------IIPDTIT 330
++ M + + P+V + I+I+ LCK++ VDEAL +F +M + I D+I
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQ-PADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+++LIDGLCK GR+ A EL+ M + + + TYN L+D C++ ++ A + +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
++ I+P+VVT N ++ G+C+ L A F D+ +G V TY +I+ C
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
++A+ +M + GC PDA + +I L + ++ A +++ ++ G
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 167/330 (50%), Gaps = 4/330 (1%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ +A V+ ++ + +P+ VT+ T++ G+C + A+ F D+ G + N V+Y
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
TLI C + ++ ++ P+ +Y +I LC+ + DA + ++
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
S D++ YN L+ FC ++ E+L +M ++ PD IT+NTL+ GK + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPNVHSYSIII 300
+ ++ M + G+ P + TY +++D YC V E+++A+ + M V PN Y+I+I
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
+ K +AL+L EM+ + P+ TY++L L + + +L+DEM +
Sbjct: 660 NAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCE 719
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
++ T L++ L S D+ + L K M+
Sbjct: 720 PNQITMEILMERLSGS---DELVKLRKFMQ 746
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 35 SIHNADDAISIFNRLL--GTSPTPSII--------EFGQIPSAFSVLGKILKKGYRPDAV 84
S+ N + A+ + ++L G SP I + + A V+ K+ + G+ D +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
LI C K + + D+ G + + ++Y TLI + + +++ Q+
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM-VVKKVSPDVVTYNSLLYGFCIVGQ 203
+ P V Y +ID+ C + +A LF +M + KV+P+ V YN L+ F +G
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+A L +EM K + P+V T+N L L ++ + ++ M++Q +P+ T
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 264 LMD 266
LM+
Sbjct: 728 LME 730
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 116/265 (43%), Gaps = 47/265 (17%)
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+K + + ++ + + + ++I + MV++++ ++ ++ + ++ + +
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLD--SNMKNSQVRNVV 191
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQ--PADKFTYNSLLDVLCKSHHV--DKAIALTKKMR 390
+D L ++G + A++++DEM K P ++ T + +L + K + +K IAL +
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFS 251
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVF----------------------------- 421
G+ P+ V + LCK R A ++
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 422 --QDLVIKGYHVTVR----TYNIMINGLCKEGLFDEALALLSEME----DKGCI--PDAI 469
DLV+K V +R T I+IN LCK DEAL + +M D G + D+I
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 470 TFETIICALFEKGDNYKAEKLLREM 494
F T+I L + G +AE+LL M
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRM 396
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 213/422 (50%), Gaps = 3/422 (0%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D + T L+ GL +G + A + ++ G + + ++Y TL+ L R + L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+VE + +KP+ +++N II++ + + A +F +M P T+N+L+ G+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 202 GQLKEATELLDEMTRKN-IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
G+L+E++ LLD M R + P+ T N LV A + ++EA N++ M GVKPD+ T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 261 YNSLMDGYCLVNEINKAI-AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
+N+L Y + A I+ M V PNV + I++G C+ ++EAL F M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
+ + + P+ ++SLI G + E+VD M G D T+++L++ +
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
+ + M + GI PD+ ++IL G + G + A+++ + G V Y +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 440 INGLCKEGLFDEALALLSEMED-KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
I+G C G +A+ + +M G P+ T+ET+I E +KAE+LL++M +
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKN 737
Query: 499 LL 500
++
Sbjct: 738 VV 739
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 208/416 (50%), Gaps = 13/416 (3%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAF----------SVLGKILKKGYRPDAVTLTTLI 90
+A SIFN L+ PS+I + + +A S++ K+ K G +PD + +I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQ-VEGHLV 149
G + +A++ + + G + ++ TLIKG ++G+ S +LL + ++
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+PN N ++ + C + + +A+N+ +M V PDVVT+N+L + +G A +
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 210 LL-DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
++ M + P+V T T+V+ +EG ++EA M + GV P+LF +NSL+ G+
Sbjct: 517 MIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF 576
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
+N+++ +++ M + GV P+V ++S +++ + ++ +M I PD
Sbjct: 577 LNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 636
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
+S L G ++G A +++++M G + Y ++ C + + KA+ + KK
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKK 696
Query: 389 MRD-QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
M G+ P++ TY L+ G + + A+E+ +D+ K T +T ++ +G
Sbjct: 697 MCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 166/333 (49%), Gaps = 13/333 (3%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKG-----------YRPDAVTL 86
N D A+ IF ++ + P+ F + + +GK+ + +P+ T
Sbjct: 404 NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC 463
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQT-RASLQLLRQVE 145
L++ C + ++ A + + G + + V++ TL K R+G T A ++ ++
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
+ VKPNV TI++ C++ + +A F M V P++ +NSL+ GF + +
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
E++D M + PDV+TF+TL++A G++K + + M++ G+ PD+ ++ L
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKI 324
GY E KA ILN M + GV PNV Y+ II G C + +A+ ++ +M + +
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 703
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
P+ TY +LI G ++ + A EL+ +M K
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 129/291 (44%), Gaps = 54/291 (18%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLG-----------KILKKGYRPDAVTLTT 88
++A +I ++ P ++ F + A++ +G ++L +P+ T T
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGT 536
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
++ G C +G++ AL+F + G N + +LIKG + +++ +E
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 149 VKPNVVMYNTIIDSLCK-------DKLVSD-----------AFNLFSEMVVKK------- 183
VKP+VV ++T++++ +++ +D AF++ ++ +
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAE 656
Query: 184 ----------VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR-KNIGPDVITFNTLVDA 232
V P+VV Y ++ G+C G++K+A ++ +M + P++ T+ TL+
Sbjct: 657 QILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
G+ +A+ +L M + V P T + DG+ K+I + NS
Sbjct: 717 FGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW-------KSIGVSNS 760
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 35/175 (20%)
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
D + + L++GL + GR A + + + +G TY +L+ L + H ++L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
K+ G++PD + + N +IN +
Sbjct: 378 SKVEKNGLKPDTILF-----------------------------------NAIINASSES 402
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLE 501
G D+A+ + +M++ GC P A TF T+I + G ++ +LL M+ +L+
Sbjct: 403 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 215/439 (48%), Gaps = 1/439 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR-GFRLNQVS 120
G+ A V +++ PD T + ++ C G V +A+ F + + G LN V+
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
Y +LI G +G ++LR + V NVV Y ++I CK L+ +A ++F +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
KK+ D Y L+ G+C GQ+++A + D M + + N+L++ K G +
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
EA+ + + M +KPD TYN+L+DGYC +++A+ + + M Q+ V P V +Y+I++
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
G + + L+L+ M + D I+ S+L++ L K G + A +L + + +G
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
D T N ++ LCK V++A + + +P V TY L G K G LK A V
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+ + KG T+ YN +I+G K ++ L+ E+ +G P T+ +I
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 481 KGDNYKAEKLLREMMARGL 499
G KA EM+ +G+
Sbjct: 624 IGMIDKAYATCFEMIEKGI 642
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 237/512 (46%), Gaps = 74/512 (14%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G + A V + +K D L+ G C G++R A++ HD+++ G R N
Sbjct: 310 GLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTIC 369
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+LI G C+ GQ + Q+ ++ +KP+ YNT++D C+ V +A L +M
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
K+V P V+TYN LL G+ +G + L M ++ + D I+ +TL++AL K G+ E
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Query: 242 A----KNVLAV----------MMKQGV---------------------KPDLFTYNSLMD 266
A +NVLA +M G+ KP + TY +L
Sbjct: 490 AMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSH 549
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
GY V + +A A+ M ++G+ P + Y+ +I G K + +++ +L E+ + P
Sbjct: 550 GYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP 609
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
TY +LI G C G I A+ EM KG + + + + L + +D+A L
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL 669
Query: 387 KKMRD-----QGIQ---------------------------------PDVVTYNILMDGL 408
+K+ D G Q P+ + YN+ + GL
Sbjct: 670 QKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGL 729
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVR-TYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
CK G+L++A+++F DL+ + TY I+I+G G ++A L EM KG IP+
Sbjct: 730 CKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN 789
Query: 468 AITFETIICALFEKGDNYKAEKLLREMMARGL 499
+T+ +I L + G+ +A++LL ++ +G+
Sbjct: 790 IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI 821
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 217/443 (48%), Gaps = 39/443 (8%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G + A + ++ +K P +T L+KG G L ++ RG +++S
Sbjct: 415 GYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISC 474
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
TL++ L ++G +++L V + + + N +I LCK + V++A + + +
Sbjct: 475 STLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI 534
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ P V TY +L +G+ VG LKEA + + M RK I P + +NTL+ K ++ +
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK 594
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+++ + +G+ P + TY +L+ G+C + I+KA A M ++G+T NV+ S I +
Sbjct: 595 VADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIAN 654
Query: 302 GLCKNKMVDEALNLFAEM----------------------ECIK---------------- 323
L + +DEA L ++ C+K
Sbjct: 655 SLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKL 714
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ-PADKFTYNSLLDVLCKSHHVDKA 382
++P+ I Y+ I GLCK+G++ A +L ++ + + D++TY L+ + ++KA
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
L +M +GI P++VTYN L+ GLCK G + AQ + L KG TYN +I+G
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 443 LCKEGLFDEALALLSEMEDKGCI 465
L K G EA+ L +M +KG +
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGLV 857
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 221/441 (50%), Gaps = 1/441 (0%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
E G + +A V + G P ++ +L+ L KGE AL +D +++ +
Sbjct: 167 EKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVF 226
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ ++ CR G ++ ++ E L ++ NVV YN++I+ V +
Sbjct: 227 TCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRL 286
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M + VS +VVTY SL+ G+C G ++EA + + + K + D + L+D + G
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
+++A V M++ GV+ + NSL++GYC ++ +A I + M + P+ H+Y+
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
++ G C+ VDEAL L +M +++P +TY+ L+ G + G L M +G
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
AD+ + ++LL+ L K ++A+ L + + +G+ D +T N+++ GLCK ++ A+
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
E+ ++ I V+TY + +G K G EA A+ ME KG P + T+I
Sbjct: 527 EILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGA 586
Query: 479 FEKGDNYKAEKLLREMMARGL 499
F+ K L+ E+ ARGL
Sbjct: 587 FKYRHLNKVADLVIELRARGL 607
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 199/367 (54%), Gaps = 11/367 (2%)
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+L+R + P V ++ I+ + LV +A ++F M P +++ NSLL
Sbjct: 143 ELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ-----G 253
G+ A + D+M + PDV T + +V+A + GNV +A V K+ G
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA----MVFAKETESSLG 256
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
++ ++ TYNSL++GY ++ ++ +L M++RGV+ NV +Y+ +I G CK +++EA
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
++F ++ K++ D Y L+DG C++G+I A + D M G + NSL++
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
CKS + +A + +M D ++PD TYN L+DG C+ G + A ++ + K TV
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLRE 493
TYNI++ G + G F + L+L M +G D I+ T++ ALF+ GD +A KL
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 494 MMARGLL 500
++ARGLL
Sbjct: 497 VLARGLL 503
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 233/478 (48%), Gaps = 73/478 (15%)
Query: 13 FLRLNNFPVVSKPSFHSH-SLSPSIHNA---DDAISIFNRLLGTSPTPSIIEFGQIPSAF 68
F R+N++ + KP H++ +L A D+A+ + +++ P+++ + + +
Sbjct: 389 FSRMNDWSL--KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 69 SVLGK----------ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
S +G +LK+G D ++ +TL++ L G+ A++ ++V+ARG +
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQV--------------------------EGHLVK-- 150
++ +I GLC+M + + ++L V E VK
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 151 -------PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ 203
P + MYNT+I K + ++ +L E+ + ++P V TY +L+ G+C +G
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+ +A EM K I +V + + ++L + + EA +++++ V DL
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA----CLLLQKIVDFDL----- 677
Query: 264 LMDGYCLVNEINKAIA------------ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
L+ GY + E +A A + NS ++ + PN Y++ I GLCK +++
Sbjct: 678 LLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLED 737
Query: 312 ALNLFAEM-ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
A LF+++ + IPD TY+ LI G +G I+ A+ L DEM KG + TYN+L+
Sbjct: 738 ARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALI 797
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
LCK +VD+A L K+ +GI P+ +TYN L+DGL K G + A + + ++ KG
Sbjct: 798 KGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 237/497 (47%), Gaps = 23/497 (4%)
Query: 24 KPSFHSHSLSPSIH----NADDAISIFNRLLGTSPTPSIIEFGQI----------PSAFS 69
KP S S S N D+ S L+ P++ Q+ A
Sbjct: 68 KPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIR 127
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
V+ ++ G PDA T L+ LC +G V A+Q + + G+ N V+Y L++GLC
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+G SLQ + ++ + PN Y+ ++++ K++ +A L E++VK P++V
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
+YN LL GFC G+ +A L E+ K +V+++N L+ L +G +EA ++LA M
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA----QRGVTPNVHSYSIIIHGLCK 305
P + TYN L++ +A+ +L M+ Q VT SY+ +I LCK
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT--SYNPVIARLCK 365
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK-SGRISHAWELVDEMHNKGQPADKF 364
VD + EM + P+ TY++ I LC+ + ++ A+ ++ + NK +
Sbjct: 366 EGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHD 424
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
Y S++ LC+ + A L +M G PD TY+ L+ GLC EG A EV +
Sbjct: 425 FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Query: 425 -VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
+ TV +N MI GLCK D A+ + M +K +P+ T+ ++ + + +
Sbjct: 485 EESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDE 544
Query: 484 NYKAEKLLREMMARGLL 500
A+++L E+ R ++
Sbjct: 545 LELAKEVLDELRLRKVI 561
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 170/334 (50%), Gaps = 4/334 (1%)
Query: 144 VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ 203
+ G KP++ + D + +SD+F+ +V P+V LLY C +
Sbjct: 62 ITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANR 121
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
LK+A +++ M I PD + LV+ L K GNV A ++ M G + TYN+
Sbjct: 122 LKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
L+ G C++ +N+++ + + Q+G+ PN +YS ++ K + DEA+ L E+
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
P+ ++Y+ L+ G CK GR A L E+ KG A+ +YN LL LC ++A
Sbjct: 242 GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEAN 301
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH---VTVRTYNIMI 440
+L +M P VVTYNIL++ L GR + A +V +++ KG H VT +YN +I
Sbjct: 302 SLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS-KGNHQFRVTATSYNPVI 360
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
LCKEG D + L EM + C P+ T+ I
Sbjct: 361 ARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 240/503 (47%), Gaps = 50/503 (9%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTL 89
+ A +++ ++ P++I F G + + ++ ++ VT L
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I G G++ A +FH D+ GF + S+ LI+G C+ G + + ++ +
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
P YN I +LC + DA L S M +PDVV+YN+L++G+ +G+ EA+
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASL 395
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L D++ +I P ++T+NTL+D L + GN++ A+ + M Q + PD+ TY +L+ G+
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYS-------------------------------- 297
++ A + + M ++G+ P+ ++Y+
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 298 ----IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+ I GLCK + +A+ ++ + ++PD +TY+++I G ++G+ A L DE
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M K TY L+ K+ +++A + +M+ +G++P+V+T+N L+ G+CK G
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
+ A + +G +Y ++I+ C ++E + L EM DK PD T
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA 695
Query: 474 IICALFEKGDNYKAEKLLREMMA 496
+ L + ++ + E L R +++
Sbjct: 696 LFKHLEKDHESREVEFLERLLLS 718
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 214/438 (48%), Gaps = 13/438 (2%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A +V +++ G P +T T++ G++ R + ++ R ++V+Y LI
Sbjct: 222 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 281
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVM----YNTIIDSLCKDKLVSDAFNLFSEMVVK 182
G + G+ ++ R+ G + + + +N +I+ CK L DA+ + EM+
Sbjct: 282 GFSKNGK----MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ P TYN + C G++ +A ELL M PDV+++NTL+ K G EA
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEA 393
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ + + P + TYN+L+DG C + A + M + + P+V +Y+ ++ G
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
KN + A ++ EM I PD Y++ G + G A+ L +EM A
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 513
Query: 363 KFT-YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
T YN +D LCK ++ KAI +K+ G+ PD VTY ++ G + G+ K A+ ++
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+++ K + +V TY ++I G K G ++A +EM+ +G P+ +T ++ + +
Sbjct: 574 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 633
Query: 482 GDNYKAEKLLREMMARGL 499
G+ +A + L +M G+
Sbjct: 634 GNIDEAYRYLCKMEEEGI 651
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 183/385 (47%), Gaps = 40/385 (10%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P+V N ++ L ++++ A ++ M+ + P V+T+N++L G L+ ++
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
EM R+NI +T+N L++ K G ++EA+ M + G +++N L++GYC
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+ A + + M G+ P +Y+I I LC +D+A L + M PD ++
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVS 376
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y++L+ G K G+ A L D++ TYN+L+D LC+S +++ A L ++M
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK-----GYHVTVRT---------- 435
Q I PDV+TY L+ G K G L A EV+ +++ K GY T R
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 436 ---------------------YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
YN+ I+GLCK G +A+ ++ G +PD +T+ T+
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 475 ICALFEKGDNYKAEKLLREMMARGL 499
I E G A L EM+ + L
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRL 581
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 4/321 (1%)
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F +M+ K P V N +L + +A+ + + M I P VITFNT++D+ K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G+++ + M ++ ++ TYN L++G+ ++ +A M + G +S
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
++ +I G CK + D+A + EM I P T TY+ I LC GRI A EL+ M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM- 369
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
D +YN+L+ K +A L +R I P +VTYN L+DGLC+ G L+
Sbjct: 370 ---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
AQ + +++ + V TY ++ G K G A + EM KG PD + T
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 476 CALFEKGDNYKAEKLLREMMA 496
GD+ KA +L EM+A
Sbjct: 487 VGELRLGDSDKAFRLHEEMVA 507
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 35/221 (15%)
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
K + M ++G P+V + +I++ L ++M+++A ++ M I+P IT+
Sbjct: 186 KFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITF---- 241
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
N++LD K+ +++ + +M+ + I+
Sbjct: 242 -------------------------------NTMLDSCFKAGDLERVDKIWLEMKRRNIE 270
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
VTYNIL++G K G+++ A+ D+ G+ VT ++N +I G CK+GLFD+A +
Sbjct: 271 FSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGV 330
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
EM + G P T+ ICAL + G A +LL M A
Sbjct: 331 TDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA 371
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 9/223 (4%)
Query: 23 SKPSFHSHS-LSPSIHNADDAISIFN-RLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYR 80
S +F H + + H+A D ++I+N R+ G + + G + A KI + G
Sbjct: 495 SDKAFRLHEEMVATDHHAPD-LTIYNVRIDG------LCKVGNLVKAIEFQRKIFRVGLV 547
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
PD VT TT+I+G G+ + A +D+++ + + ++Y LI G + G+ + Q
Sbjct: 548 PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQY 607
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
+++ V+PNV+ +N ++ +CK + +A+ +M + + P+ +Y L+ C
Sbjct: 608 STEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCD 667
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
+ +E +L EM K I PD T L L K+ +E +
Sbjct: 668 FEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVE 710
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/538 (23%), Positives = 240/538 (44%), Gaps = 90/538 (16%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFSVLG-----------KILKKGYRPDAVTLTTL 89
+A+++F ++ P++I + I + F +G K+ G PDA T TL
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 90 IKGLCLKGEV-RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
I C +G + + A Q +++ A GF ++V+Y L+ + + + ++++L ++ +
Sbjct: 286 IT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
P++V YN++I + +D ++ +A L ++M K PDV TY +LL GF G+++ A
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 209 ELLDEMT----RKNI-------------------------------GPDVITFNTLVDAL 233
+ +EM + NI PD++T+NTL+
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
G+ G E V M + G P+ T+N+L+ Y +A+ + M GVTP++
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+Y+ ++ L + M +++ + AEME + P+ +TY SL+ I L +E
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 354 MHN-----------------------------------KGQPADKFTYNSLLDVLCKSHH 378
+++ +G D T NS++ + +
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
V KA + M+++G P + TYN LM + ++E+ ++++ KG + +YN
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
+I C+ +A + SEM + G +PD IT+ T I + Y A+ + E +
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS-------YAADSMFEEAIG 755
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 217/426 (50%), Gaps = 12/426 (2%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D + +I L +G V A + + GF L+ SY +LI G+ R ++ +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCK-----DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
+++E KP ++ YN I++ K +K+ S L +M ++PD TYN+L+
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS----LVEKMKSDGIAPDAYTYNTLI- 286
Query: 197 GFCIVGQL-KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
C G L +EA ++ +EM D +T+N L+D GK KEA VL M+ G
Sbjct: 287 TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P + TYNSL+ Y +++A+ + N MA++G P+V +Y+ ++ G + V+ A+++
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
F EM P+ T+++ I G+ + ++ DE++ G D T+N+LL V +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
+ + + K+M+ G P+ T+N L+ + G + A V++ ++ G + T
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
YN ++ L + G+++++ +L+EMED C P+ +T+ +++ A + G L E +
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA-YANGKEIGLMHSLAEEV 585
Query: 496 ARGLLE 501
G++E
Sbjct: 586 YSGVIE 591
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 220/455 (48%), Gaps = 38/455 (8%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A VL +++ G+ P VT +LI G + A++ + + +G + + +Y TL+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
G R G+ +++ + ++ KPN+ +N I ++ +F E+ V +SP
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D+VT+N+LL F G E + + EM R P+ TFNTL+ A + G+ ++A V
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 247 AVMMKQGVKPDLFTYNSLM--------------------DGYCLVNEIN----------- 275
M+ GV PDL TYN+++ DG C NE+
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGL----CKNKMVDEALNLFAEMECIKIIPDTITY 331
K I +++S+A+ + + ++++ L K ++ EA F+E++ PD T
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+S++ + ++ A ++D M +G TYNSL+ + +S K+ + +++
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+GI+PD+++YN ++ C+ R+++A +F ++ G V TYN I + +F+E
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 752
Query: 452 ALALLSEMEDKGCIPDAITFETII---CALFEKGD 483
A+ ++ M GC P+ T+ +I+ C L K +
Sbjct: 753 AIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 216/474 (45%), Gaps = 36/474 (7%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ SA ++ + + G+ D + T+LI G R A+ + G + ++Y
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 122 GTLIKGLCRMGQTRASL-QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
++ +MG + L+ +++ + P+ YNT+I + L +A +F EM
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
S D VTYN+LL + + KEA ++L+EM P ++T+N+L+ A ++G +
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
EA + M ++G KPD+FTY +L+ G+ ++ A++I M G PN+ +++ I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
E + +F E+ + PD +T+++L+ ++G S + EM G
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM--------------- 405
++ T+N+L+ + ++A+ + ++M D G+ PD+ TYN ++
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 406 -----DGLCKEGRL---------KNAQEV--FQDLVIKGYHVTVRTYNIMINGL----CK 445
DG CK L N +E+ L + Y + +++ L K
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
L EA SE++++G PD T +++ + KA +L M RG
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 660
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 182/395 (46%), Gaps = 10/395 (2%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKK----------GYRPDAVTLTTL 89
+ A+SIF + P+I F + GK + G PD VT TL
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ G ++ GF + ++ TLI R G ++ + R++ V
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
P++ YNT++ +L + + + + +EM + P+ +TY SLL+ + ++
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L +E+ I P + TLV K + EA+ + + ++G PD+ T NS++ Y
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ KA +L+ M +RG TP++ +Y+ +++ ++ ++ + E+ I PD I
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+Y+++I C++ R+ A + EM N G D TYN+ + ++AI + + M
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
G +P+ TYN ++DG CK R A+ +DL
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 168/361 (46%), Gaps = 10/361 (2%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFS----------VLGKILKKGYRPDAVTLTTLI 90
+ + IF+ + +P I+ + + + F V ++ + G+ P+ T TLI
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
G +A+ + ++ G + +Y T++ L R G S ++L ++E K
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
PN + Y +++ + K + +L E+ + P V +L+ L EA
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
E+ + PD+ T N++V G+ V +A VL M ++G P + TYNSLM +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+ K+ IL + +G+ P++ SY+ +I+ C+N + +A +F+EM I+PD IT
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y++ I A +V M G ++ TYNS++D CK + D+A + +R
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Query: 391 D 391
+
Sbjct: 797 N 797
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 110/274 (40%), Gaps = 74/274 (27%)
Query: 299 IIHGLCKNKMVD---EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
+ GL +K D A + F + + + + D + +I L K GR+S A + + +
Sbjct: 141 FLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQ 200
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM---------- 405
G D ++Y SL+ S +A+ + KKM + G +P ++TYN+++
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 406 ------------DGL-------------CKEGRL-KNAQEVFQ----------------- 422
DG+ CK G L + A +VF+
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 423 ------------------DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGC 464
++V+ G+ ++ TYN +I+ ++G+ DEA+ L ++M +KG
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 465 IPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
PD T+ T++ G A + EM G
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 219/461 (47%), Gaps = 41/461 (8%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ +A SV+ ++ + G+ D +I C + AL F D ++ +G ++N V
Sbjct: 298 KMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVS 357
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
+++ C+M +L+ ++ + + V YN D+L K V +AF L EM +
Sbjct: 358 LILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR 417
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ PDV+ Y +L+ G+C+ G++ +A +L+DEM + PD+IT+N LV L + G+ +E
Sbjct: 418 GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV 477
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR--------------- 287
+ M +G KP+ T + +++G C ++ +A +S+ Q+
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEA 537
Query: 288 GVTPNVHS-------------YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
G++ + Y + LC +++A ++ +M ++ P +
Sbjct: 538 GLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKM 597
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I CK + A L D M +G D FTY ++ C+ + + KA +L + M+ +GI
Sbjct: 598 IGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Query: 395 QPDVVTYNILMDGLCK-----------EGRL--KNAQEVFQDLVIKGYHVTVRTYNIMIN 441
+PDVVTY +L+D K +G + + A EV ++ G + V Y ++I+
Sbjct: 658 KPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLID 717
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
CK ++A L M D G PD + + T+I + F KG
Sbjct: 718 RQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 213/456 (46%), Gaps = 44/456 (9%)
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLN---QVSYGTLIKGLCRMGQTRASLQLLRQV 144
T I GLC+ GE +A+ +++ R + + G +++G C + +A+ ++ ++
Sbjct: 250 TFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEM 309
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
E +V +ID CK+ + +A +M+ K + + V + +L +C +
Sbjct: 310 EEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMC 369
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
EA E E NI D + +N DAL K G V+EA +L M +G+ PD+ Y +L
Sbjct: 370 LEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTL 429
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+DGYCL ++ A+ +++ M G++P++ +Y++++ GL +N +E L ++ M+
Sbjct: 430 IDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP 489
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNK--------------------------- 357
P+ +T S +I+GLC + ++ A + + K
Sbjct: 490 KPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVR 549
Query: 358 -GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
P K Y L LC +++KA + KKM ++P ++ CK ++
Sbjct: 550 LEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVRE 609
Query: 417 AQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII- 475
AQ +F +V +G + TY IMI+ C+ +A +L +M+ +G PD +T+ ++
Sbjct: 610 AQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD 669
Query: 476 ------------CALFEKGDNYKAEKLLREMMARGL 499
C++ + KA ++LRE A G+
Sbjct: 670 RYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGI 705
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 179/374 (47%), Gaps = 41/374 (10%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
++ + G++ AF +L ++ +G PD + TTLI G CL+G+V AL D+++ G
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSP 456
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ ++Y L+ GL R G L++ +++ KPN V + II+ LC + V +A + F
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFF 516
Query: 177 SEM-------------------VVKKVSPDVV---------TYNSLLYGFCIVGQLKEAT 208
S + + KK V Y L + CI G L++A
Sbjct: 517 SSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAH 576
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
++L +M+ + P ++ A K NV+EA+ + M+++G+ PDLFTY ++ Y
Sbjct: 577 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 636
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIII----------HGLCKNK---MVDEALNL 315
C +NE+ KA ++ M QRG+ P+V +Y++++ H C + +A +
Sbjct: 637 CRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEV 696
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
E I D + Y+ LID CK + A EL D M + G D Y +L+ +
Sbjct: 697 LREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFR 756
Query: 376 SHHVDKAIALTKKM 389
++D A+ L ++
Sbjct: 757 KGYIDMAVTLVTEL 770
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 201/453 (44%), Gaps = 42/453 (9%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+P A L K+L KG + + V ++ +++ C AL+ + L++V Y
Sbjct: 334 LPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNV 393
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
L ++G+ + +LL++++ + P+V+ Y T+ID C V DA +L EM+
Sbjct: 394 AFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNG 453
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
+SPD++TYN L+ G G +E E+ + M + P+ +T + +++ L VKEA+
Sbjct: 454 MSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE 513
Query: 244 NVLAVMMKQ---------------GVKPDLF-------------TYNSLMDGYCLVNEIN 275
+ + + ++ G+ + Y L C+ +
Sbjct: 514 DFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLE 573
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
KA +L M+ V P +I CK V EA LF M +IPD TY+ +I
Sbjct: 574 KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMI 633
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK---SHHVD----------KA 382
C+ + A L ++M +G D TY LLD K HH KA
Sbjct: 634 HTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKA 693
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
+ ++ GI DVV Y +L+D CK L+ A E+F ++ G + Y +I+
Sbjct: 694 SEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISS 753
Query: 443 LCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
++G D A+ L++E+ K IP +FE +
Sbjct: 754 YFRKGYIDMAVTLVTELSKKYNIPSE-SFEAAV 785
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 194/453 (42%), Gaps = 72/453 (15%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G N+ +Y ++K LCR G + LL + E +V Y T I+ LC A
Sbjct: 211 GLCANEYTYAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFINGLCVTGETEKA 264
Query: 173 FNLFSEMVVKK--VSPDV-VTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTL 229
L E++ +K D+ ++ GFC ++K A ++ EM G DV +
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+D K N+ EA L M+ +G+K + + ++ YC ++ +A+ +
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
+ Y++ L K V+EA L EM+ I+PD I Y++LIDG C G++ A +
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 350 LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
L+DEM G D TYN L+ L ++ H ++ + + ++M+ +G +P+ VT +++++GLC
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Query: 410 KEGRLKNAQEVFQDL----------VIKGY---HVTVRTYNIMIN--------------- 441
++K A++ F L +KGY ++ + Y +
Sbjct: 505 FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFF 564
Query: 442 GLCKEGLFD-----------------------------------EALALLSEMEDKGCIP 466
LC EG + EA L M ++G IP
Sbjct: 565 SLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIP 624
Query: 467 DAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D T+ +I + KAE L +M RG+
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 166/401 (41%), Gaps = 57/401 (14%)
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
+L LRQ++ H V PNV Y T++ L L ++ E++ +
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEER----------- 121
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
GF ++ ++ E +E R + V LV A G EA +VL +
Sbjct: 122 GFTVMDLIEVIGEQAEEKKRSFVLIRVS--GALVKAYVSLGMFDEATDVLFQSKRLDCVV 179
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
D+ N LM+ +I + + + Q G+ N ++Y+I++ LC+ ++EA L
Sbjct: 180 DIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL 239
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHA----WELVD-------------------- 352
E E + Y + I+GLC +G A EL+D
Sbjct: 240 IENESV------FGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGF 293
Query: 353 --------------EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
EM G D + +++D CK+ ++ +A+ KM +G++ +
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
V ++++ CK A E F++ + YN+ + L K G +EA LL E
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
M+D+G +PD I + T+I +G A L+ EM+ G+
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGM 454
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN-----------KMVDEALNLFAEMECIK 323
N A++ L + + GV+PNV++Y+ ++ L +++ F M+ I+
Sbjct: 71 NLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIE 130
Query: 324 IIPDTI-----------TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
+I + +L+ G A +++ + D N L++
Sbjct: 131 VIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNR 190
Query: 373 LCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
+ + + + L K+++ G+ + TY I++ LC++G L+ A + + + +
Sbjct: 191 MTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NES 244
Query: 433 VRTYNIMINGLCKEGLFDEALALLSEMEDK 462
V Y INGLC G ++A+AL+ E+ D+
Sbjct: 245 VFGYKTFINGLCVTGETEKAVALILELIDR 274
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 211/417 (50%), Gaps = 11/417 (2%)
Query: 27 FHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTL 86
F H LS H +S+F R + G + +L + G RPD V
Sbjct: 258 FVEHMLSRGRHLNAAVLSLFIRKYCSD--------GYFDKGWELLMGMKHYGIRPDIVAF 309
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
T I LC G ++ A + G + VS ++I G C++G+ +++L+
Sbjct: 310 TVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR- 368
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
++PN+ +Y++ + ++C + A +F E+ + PD V Y +++ G+C +G+ +
Sbjct: 369 --LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A + + + P + T L+ A + G++ +A++V M +G+K D+ TYN+LM
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
GY +++NK +++ M G++P+V +Y+I+IH + +DEA + +E+ +P
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
T+ ++ +I G K G A+ L M + D T ++LL CK+ ++KAI L
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
K+ D G++PDVV YN L+ G C G ++ A E+ +V +G T++ ++ GL
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 217/451 (48%), Gaps = 38/451 (8%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ A + K+ + G P +L+K + + A +F + +++RG LN
Sbjct: 216 KVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLS 275
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
I+ C G +LL ++ + ++P++V + ID LCK + +A ++ ++ +
Sbjct: 276 LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+S D V+ +S++ GFC VG+ +EA +L+ + P++ +++ + + G++ A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ + + G+ PD Y +++DGYC + +KA ++ + G P++ + +I+I
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
+ + +A ++F M+ + D +TY++L+ G K+ +++ +EL+DEM + G D
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 363 KFTYNSLLDVLCKSHHVDKA----------------IALTK------------------- 387
TYN L+ + ++D+A +A T
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
M D ++PDVVT + L+ G CK R++ A +F L+ G V YN +I+G C G
Sbjct: 573 YMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICAL 478
++A L+ M +G +P+ T ++ L
Sbjct: 633 DIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 181/377 (48%), Gaps = 11/377 (2%)
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
R+ + + LI R + +L+L +V+ + P+ + SL K+ L
Sbjct: 198 RVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPS----RGVCISLLKEILRVHGLE 253
Query: 175 LFSEMVVKKVSP----DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
L E V +S + + + +C G + ELL M I PD++ F +
Sbjct: 254 LAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
D L K G +KEA +VL + G+ D + +S++DG+C V + +AI +++S R
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR--- 370
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
PN+ YS + +C + A +F E+ + ++PD + Y+++IDG C GR A++
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
+ G P T L+ + + A ++ + M+ +G++ DVVTYN LM G K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
+L E+ ++ G V TYNI+I+ + G DEA ++SE+ +G +P +
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 471 FETIICALFEKGDNYKA 487
F +I ++GD +A
Sbjct: 551 FTDVIGGFSKRGDFQEA 567
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 172/367 (46%), Gaps = 9/367 (2%)
Query: 138 LQLLRQVEGHLVKP----NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
L+L R+ H++ N + + I C D + L M + PD+V +
Sbjct: 252 LELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 311
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
+ C G LKEAT +L ++ I D ++ ++++D K G +EA + ++
Sbjct: 312 FIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA---IKLIHSFR 368
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
++P++F Y+S + C ++ +A I + + G+ P+ Y+ +I G C D+A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLC-KSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
F + P ++T S+++ G C + G IS A + M +G D TYN+L+
Sbjct: 429 QYFGAL-LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 373 LCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
K+H ++K L +MR GI PDV TYNIL+ + G + A E+ +L+ +G+ +
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 433 VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLR 492
+ +I G K G F EA L M D PD +T ++ + KA L
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 493 EMMARGL 499
+++ GL
Sbjct: 608 KLLDAGL 614
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 52/335 (15%)
Query: 16 LNNFPVVSKPS-----FHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSV 70
++ F V KP HS L P+I + +S +I G + A ++
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLRPNI------------FVYSSFLSNICSTGDMLRASTI 395
Query: 71 LGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCR 130
+I + G PD V TT+I G C G +A Q+ ++ G + + LI R
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 131 MGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT 190
G + + R ++ +K +VV YN ++ K ++ F L EM +SPDV T
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM- 249
YN L++ + G + EA E++ E+ R+ P + F ++ K G+ +EA + M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 250 ----------------------------------MKQGVKPDLFTYNSLMDGYCLVNEIN 275
+ G+KPD+ YN+L+ GYC V +I
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
KA ++ M QRG+ PN ++ ++ GL + V+
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 159/346 (45%), Gaps = 3/346 (0%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+++ +ID +++ V+ A L ++ + P SLL V L+ A E ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
+ + + + +G + +L M G++PD+ + +D C +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+A ++L + G++ + S S +I G CK +EA+ L + ++ P+ YSS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSF 379
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
+ +C +G + A + E+ G D Y +++D C DKA + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
P + T IL+ + G + +A+ VF+++ +G + V TYN +++G K ++
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
L+ EM G PD T+ +I ++ +G +A +++ E++ RG +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 211/417 (50%), Gaps = 11/417 (2%)
Query: 27 FHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTL 86
F H LS H +S+F R + G + +L + G RPD V
Sbjct: 258 FVEHMLSRGRHLNAAVLSLFIRKYCSD--------GYFDKGWELLMGMKHYGIRPDIVAF 309
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
T I LC G ++ A + G + VS ++I G C++G+ +++L+
Sbjct: 310 TVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR- 368
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
++PN+ +Y++ + ++C + A +F E+ + PD V Y +++ G+C +G+ +
Sbjct: 369 --LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A + + + P + T L+ A + G++ +A++V M +G+K D+ TYN+LM
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
GY +++NK +++ M G++P+V +Y+I+IH + +DEA + +E+ +P
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
T+ ++ +I G K G A+ L M + D T ++LL CK+ ++KAI L
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
K+ D G++PDVV YN L+ G C G ++ A E+ +V +G T++ ++ GL
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 217/451 (48%), Gaps = 38/451 (8%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ A + K+ + G P +L+K + + A +F + +++RG LN
Sbjct: 216 KVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLS 275
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
I+ C G +LL ++ + ++P++V + ID LCK + +A ++ ++ +
Sbjct: 276 LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+S D V+ +S++ GFC VG+ +EA +L+ + P++ +++ + + G++ A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ + + G+ PD Y +++DGYC + +KA ++ + G P++ + +I+I
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
+ + +A ++F M+ + D +TY++L+ G K+ +++ +EL+DEM + G D
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 363 KFTYNSLLDVLCKSHHVDKA----------------IALTK------------------- 387
TYN L+ + ++D+A +A T
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
M D ++PDVVT + L+ G CK R++ A +F L+ G V YN +I+G C G
Sbjct: 573 YMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICAL 478
++A L+ M +G +P+ T ++ L
Sbjct: 633 DIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 181/377 (48%), Gaps = 11/377 (2%)
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
R+ + + LI R + +L+L +V+ + P+ + SL K+ L
Sbjct: 198 RVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPS----RGVCISLLKEILRVHGLE 253
Query: 175 LFSEMVVKKVSP----DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
L E V +S + + + +C G + ELL M I PD++ F +
Sbjct: 254 LAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
D L K G +KEA +VL + G+ D + +S++DG+C V + +AI +++S R
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR--- 370
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
PN+ YS + +C + A +F E+ + ++PD + Y+++IDG C GR A++
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
+ G P T L+ + + A ++ + M+ +G++ DVVTYN LM G K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
+L E+ ++ G V TYNI+I+ + G DEA ++SE+ +G +P +
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 471 FETIICALFEKGDNYKA 487
F +I ++GD +A
Sbjct: 551 FTDVIGGFSKRGDFQEA 567
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 172/367 (46%), Gaps = 9/367 (2%)
Query: 138 LQLLRQVEGHLVKP----NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
L+L R+ H++ N + + I C D + L M + PD+V +
Sbjct: 252 LELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 311
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
+ C G LKEAT +L ++ I D ++ ++++D K G +EA + ++
Sbjct: 312 FIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA---IKLIHSFR 368
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
++P++F Y+S + C ++ +A I + + G+ P+ Y+ +I G C D+A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLC-KSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
F + P ++T S+++ G C + G IS A + M +G D TYN+L+
Sbjct: 429 QYFGAL-LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 373 LCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
K+H ++K L +MR GI PDV TYNIL+ + G + A E+ +L+ +G+ +
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 433 VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLR 492
+ +I G K G F EA L M D PD +T ++ + KA L
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 493 EMMARGL 499
+++ GL
Sbjct: 608 KLLDAGL 614
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 52/335 (15%)
Query: 16 LNNFPVVSKPS-----FHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSV 70
++ F V KP HS L P+I + +S +I G + A ++
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLRPNI------------FVYSSFLSNICSTGDMLRASTI 395
Query: 71 LGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCR 130
+I + G PD V TT+I G C G +A Q+ ++ G + + LI R
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 131 MGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT 190
G + + R ++ +K +VV YN ++ K ++ F L EM +SPDV T
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM- 249
YN L++ + G + EA E++ E+ R+ P + F ++ K G+ +EA + M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 250 ----------------------------------MKQGVKPDLFTYNSLMDGYCLVNEIN 275
+ G+KPD+ YN+L+ GYC V +I
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
KA ++ M QRG+ PN ++ ++ GL + V+
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 159/346 (45%), Gaps = 3/346 (0%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+++ +ID +++ V+ A L ++ + P SLL V L+ A E ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
+ + + + +G + +L M G++PD+ + +D C +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+A ++L + G++ + S S +I G CK +EA+ L + ++ P+ YSS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSF 379
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
+ +C +G + A + E+ G D Y +++D C DKA + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
P + T IL+ + G + +A+ VF+++ +G + V TYN +++G K ++
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
L+ EM G PD T+ +I ++ +G +A +++ E++ RG +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 212/473 (44%), Gaps = 51/473 (10%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+ G++ A + ++ KG PD + TTLI G CL+G+ A ++ G + V
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
Y L GL G + + + L+ +E VKP V +N +I+ L + A + +
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATE------------------------------ 209
K D S++ GFC G L A E
Sbjct: 528 EHKSRENDA----SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISK 583
Query: 210 ---LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
LLD M + + P+ + L+ A + NV++A+ +++ + + PDLFTY +++
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
YC +NE +A A+ M +R V P+V +YS++++ D L++ EME +IP
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIP 696
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
D + Y+ +I+ C + + L +M + D TY LL + + L+
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LS 749
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
++M+ ++PDV Y +L+D CK G L A+ +F ++ G Y +I CK
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G EA + M + G PD + + +I G KA KL++EM+ +G+
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 210/439 (47%), Gaps = 15/439 (3%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+I A SV+ + K G PD + +I+G + +A+ + ++ + R+N V
Sbjct: 306 RIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVS 365
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
++++ C+MG + L ++ + + V YN D+L K V +A LF EM K
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK 425
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
++PDV+ Y +L+ G C+ G+ +A +L+ EM PD++ +N L L G +EA
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
L +M +GVKP T+N +++G E++KA A S+ + + ++ G
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKG 541
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC-KSGRISHAWELVDEMHNKGQPA 361
C +D A F +E +P ++ Y +L LC + IS A +L+D M G
Sbjct: 542 FCAAGCLDHAFERFIRLEF--PLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
+K Y L+ C+ ++V KA + + + I PD+ TY I+++ C+ K A +F
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALF 658
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+D+ + V TY++++N D L + EME IPD + + +I
Sbjct: 659 EDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHL 711
Query: 482 GDNYKAEKLLREMMARGLL 500
D K L ++M R ++
Sbjct: 712 NDLKKVYALFKDMKRREIV 730
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 205/439 (46%), Gaps = 33/439 (7%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ----VSYGTLI 125
+L ++L R V I+GLCL A + +++ ++Y ++
Sbjct: 239 LLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVV 298
Query: 126 KGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
+GLC + + ++ +E H + P+V +Y+ II+ K+ + A ++F++M+ K+
Sbjct: 299 RGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKR 358
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
+ V +S+L +C +G EA +L E NI D + +N DALGK G V+EA +
Sbjct: 359 INCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M +G+ PD+ Y +L+ G CL + + A ++ M G TP++ Y+++ GL
Sbjct: 419 FREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLAT 478
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ------ 359
N + EA ME + P +T++ +I+GL +G + A + + +K +
Sbjct: 479 NGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASM 538
Query: 360 ----------------------PADKFTYNSLLDVLC-KSHHVDKAIALTKKMRDQGIQP 396
P K Y +L LC + ++ KA L +M G++P
Sbjct: 539 VKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
+ Y L+ C+ ++ A+E F+ LV K + TY IMIN C+ +A AL
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALF 658
Query: 457 SEMEDKGCIPDAITFETII 475
+M+ + PD +T+ ++
Sbjct: 659 EDMKRRDVKPDVVTYSVLL 677
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 204/431 (47%), Gaps = 53/431 (12%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
DA + + GT TP I+ + G AF L + +G +P VT +I
Sbjct: 449 DAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVI 508
Query: 91 KGLCLKGEVRRALQFH----------DDVVARGF------------------RLNQVSYG 122
+GL GE+ +A F+ D + +GF L + Y
Sbjct: 509 EGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYF 568
Query: 123 TLIKGLCRMGQTRASLQ-LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
TL LC + Q LL ++ V+P MY +I + C+ V A F +V
Sbjct: 569 TLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVT 628
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
KK+ PD+ TY ++ +C + + K+A L ++M R+++ PDV+T++ L+++ E ++K
Sbjct: 629 KKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKR 687
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
V+ PD+ Y +++ YC +N++ K A+ M +R + P+V +Y++++
Sbjct: 688 EMEAFDVI------PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL- 740
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
KNK NL EM+ + PD Y+ LID CK G + A + D+M G
Sbjct: 741 ---KNK---PERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDP 794
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D Y +L+ CK ++ +A + +M + G++PDVV Y L+ G C+ G + A ++
Sbjct: 795 DAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLV 854
Query: 422 QDLVIKGYHVT 432
++++ KG T
Sbjct: 855 KEMLEKGIKPT 865
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 193/469 (41%), Gaps = 56/469 (11%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A S L +I P T+I+ +C G ++ F ++V RG S L+K
Sbjct: 74 ALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLK 133
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKP--NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV 184
+ G+ SL LL +V LVK N+ M++ ID F
Sbjct: 134 AI---GEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIF------------FRAYYSLGR 178
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKN 244
+PD+ N L+ G+ E+ R + D T+ +V AL + + +E +
Sbjct: 179 APDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEK 238
Query: 245 VLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH----SYSIII 300
+L+ ++ + Y + ++G CL + A +L + + + +Y ++
Sbjct: 239 LLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVV 298
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG----------------------- 337
GLC +++A ++ +ME I PD YS++I+G
Sbjct: 299 RGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKR 358
Query: 338 ------------LCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
C+ G S A++L E D+ YN D L K V++AI L
Sbjct: 359 INCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
++M +GI PDV+ Y L+ G C +G+ +A ++ ++ G + YN++ GL
Sbjct: 419 FREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLAT 478
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
GL EA L ME++G P +T +I L + G+ KAE +
Sbjct: 479 NGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 57/343 (16%)
Query: 9 SMSSFLRLNNFPVVSKPSFHSHSLSPSIHNADDAIS----IFNRL--LGTSPTPSIIEFG 62
+ F+RL FP+ P +L S+ D IS + +R+ LG P S+ +G
Sbjct: 551 AFERFIRLE-FPL---PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSM--YG 604
Query: 63 QIPSAFSVLGKILK----------KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR 112
++ A+ + + K K PD T T +I C E ++A +D+ R
Sbjct: 605 KLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRR 664
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
+ + V+Y L+ + L + R++E V P+VV Y +I+ C +
Sbjct: 665 DVKPDVVTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKV 717
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLY------------GF----------------CIVGQL 204
+ LF +M +++ PDVVTY LL F C +G L
Sbjct: 718 YALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
EA + D+M + PD + L+ K G +KEAK + M++ GVKPD+ Y +L
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNK 307
+ G C + KA+ ++ M ++G+ P S S + + K K
Sbjct: 838 IAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAK 880
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 190/381 (49%), Gaps = 30/381 (7%)
Query: 100 RRALQFHDDVVAR--GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMY- 156
+ AL F D ++R F+ N SY +L+ LC +++ + K ++M
Sbjct: 41 QTALSF-SDWISRIPNFKHNVTSYASLVTLLCS-----------QEIPYEVPKITILMIK 88
Query: 157 --NTIIDSL-----CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
N++ D+L C+ D+F + K++P YN+LL G ++E
Sbjct: 89 SCNSVRDALFVVDFCRTMRKGDSFE-----IKYKLTPKC--YNNLLSSLARFGLVEEMKR 141
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L EM + PD+ TFNTLV+ K G V EAK + +++ G PD FTY S + G+C
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
E++ A + M Q G N SY+ +I+GL + K +DEAL+L +M+ P+
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+ LID LC SG+ S A L +M G D Y L+ C +D+A L + M
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ G+ P+V+TYN L+ G CK+ + A + ++ + + TYN +I G C G
Sbjct: 322 LENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNL 380
Query: 450 DEALALLSEMEDKGCIPDAIT 470
D A LLS ME+ G +P+ T
Sbjct: 381 DSAYRLLSLMEESGLVPNQRT 401
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 179/351 (50%), Gaps = 11/351 (3%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
K NV Y +++ LC ++ + + M+ S + V + FC + ++ E
Sbjct: 57 KHNVTSYASLVTLLCSQEIPYEVPKITILMIK---SCNSVRDALFVVDFCRTMRKGDSFE 113
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
+ ++T K +N L+ +L + G V+E K + M++ V PD++T+N+L++GYC
Sbjct: 114 IKYKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYC 166
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ + +A + + Q G P+ +Y+ I G C+ K VD A +F EM + +
Sbjct: 167 KLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEV 226
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+Y+ LI GL ++ +I A L+ +M + + TY L+D LC S +A+ L K+M
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM 286
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ GI+PD Y +L+ C L A + + ++ G V TYN +I G CK+ +
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV- 345
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+A+ LLS+M ++ +PD IT+ T+I G+ A +LL M GL+
Sbjct: 346 HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 143/285 (50%), Gaps = 6/285 (2%)
Query: 46 FNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF 105
+N LL S+ FG + + ++L+ PD T TL+ G C G V A Q+
Sbjct: 123 YNNLLS-----SLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY 177
Query: 106 HDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK 165
++ G + +Y + I G CR + A+ ++ +++ + N V Y +I L +
Sbjct: 178 VTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFE 237
Query: 166 DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVIT 225
K + +A +L +M P+V TY L+ C GQ EA L +M+ I PD
Sbjct: 238 AKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCM 297
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
+ L+ + + EA +L M++ G+ P++ TYN+L+ G+C N ++KA+ +L+ M
Sbjct: 298 YTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKML 356
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
++ + P++ +Y+ +I G C + +D A L + ME ++P+ T
Sbjct: 357 EQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 17/329 (5%)
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR-KNIGPDVITFNTLVDALG 234
+E + K+S T + + F + + A D ++R N +V ++ +LV L
Sbjct: 12 LAEQSISKISYPFYTPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLC 71
Query: 235 KEGNVKEAKNVLAVMMKQ--GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
+ E + +M+K V+ LF + +C + I + +TP
Sbjct: 72 SQEIPYEVPKITILMIKSCNSVRDALFVVD-----FCRTMRKGDSFEI-----KYKLTPK 121
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
Y+ ++ L + +V+E L+ EM + PD T+++L++G CK G + A + V
Sbjct: 122 C--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVT 179
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
+ G D FTY S + C+ VD A + K+M G + V+Y L+ GL +
Sbjct: 180 WLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAK 239
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
++ A + + VRTY ++I+ LC G EA+ L +M + G PD +
Sbjct: 240 KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY- 298
Query: 473 TIICALFEKGDNY-KAEKLLREMMARGLL 500
T++ F GD +A LL M+ GL+
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLM 327
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 177/335 (52%), Gaps = 4/335 (1%)
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ G ++ +R+ L++P ++ ++ +V A + EM + PD
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPE--LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEY 203
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
+ LL C G +KEA+++ ++M R+ P++ F +L+ +EG + EAK VL M
Sbjct: 204 VFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQM 262
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN-KM 308
+ G++PD+ + +L+ GY ++ A ++N M +RG PNV+ Y+++I LC+ K
Sbjct: 263 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
+DEA+ +F EME D +TY++LI G CK G I + ++D+M KG + TY
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
++ K ++ + L +KM+ +G PD++ YN+++ CK G +K A ++ ++ G
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
V T+ IMING +G EA EM +G
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 163 LCKDKLVSDAFNLFSEMVVKKVSPDVVT---YNSLLYGFCIVGQLKEATELLDEMTRKNI 219
L K + + L EM +K +P+++ + L+ F +K+A E+LDEM + +
Sbjct: 141 LSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
PD F L+DAL K G+VKEA V M ++ P+L + SL+ G+C ++ +A
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+L M + G+ P++ ++ ++ G + +A +L +M P+ Y+ LI LC
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 340 KS-GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
++ R+ A + EM G AD TY +L+ CK +DK ++ MR +G+ P
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
VTY +M K+ + + E+ + + +G H + YN++I CK G EA+ L +E
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
ME G P TF +I +G +A +EM++RG+
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 180/402 (44%), Gaps = 41/402 (10%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ A VL ++ K G PD L+ LC G V+ A + +D+ + F N + +
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTS 241
Query: 124 LIKGLCRMGQTRASLQLLRQVE------------------GHLVK--------------- 150
L+ G CR G+ + ++L Q++ H K
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 151 --PNVVMYNTIIDSLCK-DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
PNV Y +I +LC+ +K + +A +F EM D+VTY +L+ GFC G + +
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+LD+M +K + P +T+ ++ A K+ +E ++ M ++G PDL YN ++
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII-- 325
C + E+ +A+ + N M G++P V ++ I+I+G + EA N F EM I
Sbjct: 422 ACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD--KFTYNSLLDVLCKSHHVDKAI 383
P T SL++ L + ++ A ++ + NK + + + L HV +A
Sbjct: 482 PQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEAC 541
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
+ M + + P TY LM GL K A E+ + +V
Sbjct: 542 SYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVV 583
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 40/319 (12%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ A VL ++ + G PD V T L+ G G++ A +D+ RGF N Y
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCY 309
Query: 122 GTLIKGLCRM-GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
LI+ LCR + ++++ ++E + + ++V Y +I CK ++ +++ +M
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
K V P VTY ++ Q +E EL+++M R+ PD++ +N ++ K G VK
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV--TP------- 291
EA + M G+ P + T+ +++G+ + +A M RG+ P
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 292 ------------------------------NVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
NV +++I IH L V EA + +M
Sbjct: 490 LLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMME 549
Query: 322 IKIIPDTITYSSLIDGLCK 340
+ ++P TY+ L+ GL K
Sbjct: 550 MDLMPQPNTYAKLMKGLNK 568
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 52 TSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA 111
T+ ++G I +SVL + KKG P VT ++ K + L+ + +
Sbjct: 346 TALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR 405
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
RG + + Y +I+ C++G+ + +++L ++E + + P V + +I+ + +
Sbjct: 406 RGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIE 465
Query: 172 AFNLFSEMVVKKV--SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD--VITFN 227
A N F EMV + + +P T SLL +L+ A ++ ++ K + V +
Sbjct: 466 ACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWT 525
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+ AL +G+VKEA + MM+ + P TY LM G
Sbjct: 526 IWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 217/408 (53%), Gaps = 6/408 (1%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
AF V +I + G++ D L+ L + +A Q +D+ R R ++ +Y +I+
Sbjct: 222 AFDVYCEIRRGGHKLDIFAYNMLLDAL---AKDEKACQVFEDMKKRHCRRDEYTYTIMIR 278
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
+ R+G+ ++ L ++ + NVV YNT++ L K K+V A +FS MV P
Sbjct: 279 TMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRP 338
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ TY+ LL GQL ++ E++++ + + ++ LV L K G+V EA +
Sbjct: 339 NEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLF 395
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M VK + +Y S+++ C + +AI +L+ + ++GV + Y+ + L K
Sbjct: 396 CDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKL 455
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
K + +LF +M+ PD TY+ LI + G + A + +E+ D +Y
Sbjct: 456 KQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISY 515
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
NSL++ L K+ VD+A K+M+++G+ PDVVTY+ LM+ K R++ A +F+++++
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV 575
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
KG + TYNI+++ L K G EA+ L S+M+ +G PD+IT+ +
Sbjct: 576 KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 237/494 (47%), Gaps = 25/494 (5%)
Query: 11 SSFLRLNNFPVVSKPSFHSHSLSPSI--HNADDAISIFNRLLGTSPTPSIIEFGQIPSAF 68
S L+ N P+++ F L PS+ ++ +D ++NR++ I+ +P F
Sbjct: 103 SEILKSLNSPLLAVEFF---KLVPSLCPYSQNDPF-LYNRII------LILSRSNLPDRF 152
Query: 69 ----SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTL 124
S+L ++K + T+ LI +++ L+ V ++N +Y L
Sbjct: 153 DRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKCL 209
Query: 125 IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV 184
++ R + + ++ K ++ YN ++D+L KD+ A +F +M +
Sbjct: 210 LQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE---KACQVFEDMKKRHC 266
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKN 244
D TY ++ +G+ EA L +EM + + +V+ +NTL+ L K V +A
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 245 VLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC 304
V + M++ G +P+ +TY+ L++ ++ + ++ +++R +T ++SY ++ L
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY--LVRTLS 383
Query: 305 KNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
K V EA LF +M + + +Y S+++ LC +G+ A E++ ++H KG D
Sbjct: 384 KLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM 443
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
YN++ L K + L +KM+ G PD+ TYNIL+ + G + A +F++L
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDN 484
+ +YN +IN L K G DEA EM++KG PD +T+ T++ +
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 485 YKAEKLLREMMARG 498
A L EM+ +G
Sbjct: 564 EMAYSLFEEMLVKG 577
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 174/353 (49%), Gaps = 15/353 (4%)
Query: 36 IHNADDAISIFNRLLGTSPTPSIIEFGQ----------IPSAFSVLGKILKKGYRPDAVT 85
I D+A+ +FN ++ T +++ + + A V ++++ G RP+ T
Sbjct: 283 IGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYT 342
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFR-LNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
+ L+ L +G++ R D VV R + Q Y L++ L ++G + +L +
Sbjct: 343 YSLLLNLLVAEGQLVRL----DGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDM 398
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
VK Y ++++SLC +A + S++ K V D + YN++ + Q+
Sbjct: 399 WSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQI 458
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+L ++M + PD+ T+N L+ + G+ G V EA N+ + + KPD+ +YNSL
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSL 518
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
++ ++++A M ++G+ P+V +YS ++ K + V+ A +LF EM
Sbjct: 519 INCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGC 578
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
P+ +TY+ L+D L K+GR + A +L +M +G D TY L + SH
Sbjct: 579 QPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSH 631
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 212/456 (46%), Gaps = 7/456 (1%)
Query: 46 FNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA--L 103
+N L+G + IE A +++ K+ + GY+ D V + +I+ L ++ L
Sbjct: 200 YNALIGACARNNDIE-----KALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLL 254
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
+ + ++ L+ +I G + G +LQLL + + +II +L
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
+A LF E+ + P YN+LL G+ G LK+A ++ EM ++ + PD
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
T++ L+DA G + A+ VL M V+P+ F ++ L+ G+ E K +L
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
M GV P+ Y+++I K +D A+ F M I PD +T+++LID CK GR
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
A E+ + M +G TYN +++ D L KM+ QGI P+VVT+
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 554
Query: 404 LMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
L+D K GR +A E +++ G + YN +IN + GL ++A+ M G
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Query: 464 CIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
P + ++I A E + +A +L+ M G+
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 188/406 (46%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G A +LG G TL ++I L G A +++ G + +Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
L+KG + G + + ++ ++E V P+ Y+ +ID+ A + EM
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
V P+ ++ LL GF G+ ++ ++L EM + PD +N ++D GK +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A M+ +G++PD T+N+L+D +C A + +M +RG P +Y+I+I+
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
+ D+ L +M+ I+P+ +T+++L+D KSGR + A E ++EM + G
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
YN+L++ + ++A+ + M G++P ++ N L++ ++ R A V
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 642
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
Q + G V TY ++ L + F + + EM GC PD
Sbjct: 643 QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 192/417 (46%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D + +I G G+ +ALQ A G + ++I L G+T + L
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
++ +KP YN ++ K + DA ++ SEM + VSPD TY+ L+ +
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
G+ + A +L EM ++ P+ F+ L+ G ++ VL M GVKPD Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N ++D + N ++ A+ + M G+ P+ +++ +I CK+ A +F ME
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
+P TY+ +I+ R L+ +M ++G + T+ +L+DV KS +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
AI ++M+ G++P YN L++ + G + A F+ + G ++ N +IN
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
++ EA A+L M++ G PD +T+ T++ AL K + EM+ G
Sbjct: 628 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 167/350 (47%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
++ G + A S++ ++ K+G PD T + LI G A ++ A + N
Sbjct: 350 VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS 409
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ L+ G G+ + + Q+L++++ VKP+ YN +ID+ K + A F
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDR 469
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M+ + + PD VT+N+L+ C G+ A E+ + M R+ P T+N ++++ G +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
+ K +L M QG+ P++ T+ +L+D Y N AI L M G+ P+ Y+
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I+ + + ++A+N F M + P + +SLI+ + R + A+ ++ M G
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
D TY +L+ L + K + ++M G +PD ++L L
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 163/349 (46%), Gaps = 7/349 (2%)
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
++Y+ +I +L + + + +AF ++ +K + +TYN+L+ +++A L+ +
Sbjct: 168 LLYSILIHALGRSEKLYEAF-----LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 222
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAK--NVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
M + D + ++ ++ +L + + + + + ++ D+ N ++ G+
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ +KA+ +L G++ + II L + EA LF E+ I P T Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++L+ G K+G + A +V EM +G D+ TY+ L+D + + A + K+M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+QP+ ++ L+ G G + +V +++ G + YN++I+ K D
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
A+ M +G PD +T+ T+I + G + AE++ M RG L
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 151/242 (62%)
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
+K +VV+ I+D LCKD +A NLF+EM K + P+V+TYN ++ FC G+ +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
+LL M K I PD++TF+ L++A KE V EA+ + M++ + P TYNS++DG+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
C + ++ A +L+SMA +G +P+V ++S +I+G CK K VD + +F EM I+ +T
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
+TY++LI G C+ G + A +L++EM + G D T++ +L LC + KA A+ +
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 389 MR 390
++
Sbjct: 246 LQ 247
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 141/247 (57%)
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
M + +I DV+ +VD L K+GN A+N+ M ++G+ P++ TYN ++D +C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+ A +L M ++ + P++ ++S +I+ K + V EA ++ EM I P TITY+S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
+IDG CK R+ A ++D M +KG D T+++L++ CK+ VD + + +M +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
I + VTY L+ G C+ G L AQ++ +++ G T++ M+ GLC + +A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 454 ALLSEME 460
A+L +++
Sbjct: 241 AILEDLQ 247
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 132/233 (56%)
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
++ LC+ G + L ++ + PNV+ YN +IDS C SDA L M+ K
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+++PD+VT+++L+ F ++ EA E+ EM R +I P IT+N+++D K+ V +A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
K +L M +G PD+ T+++L++GYC ++ + I M +RG+ N +Y+ +IHG
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
C+ +D A +L EM + PD IT+ ++ GLC + A+ +++++
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 131/241 (54%)
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
+ DVV +++ C G A L EM K I P+V+T+N ++D+ G +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+L M+++ + PD+ T+++L++ + ++++A I M + + P +Y+ +I G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
CK VD+A + M PD +T+S+LI+G CK+ R+ + E+ EMH +G A+
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
TY +L+ C+ +D A L +M G+ PD +T++ ++ GLC + L+ A + +D
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 424 L 424
L
Sbjct: 246 L 246
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 129/241 (53%)
Query: 80 RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQ 139
+ D V T ++ LC G A ++ +G N ++Y +I C G+ + Q
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
LLR + + P++V ++ +I++ K++ VS+A ++ EM+ + P +TYNS++ GFC
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
++ +A +LD M K PDV+TF+TL++ K V + M ++G+ +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
TY +L+ G+C V +++ A +LN M GV P+ ++ ++ GLC K + +A + ++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 320 E 320
+
Sbjct: 247 Q 247
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 128/247 (51%), Gaps = 2/247 (0%)
Query: 249 MMKQGVKPDLFTYNSLMDGYCLV-NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNK 307
M + +K D+ +++D C N IN A + M ++G+ PNV +Y+ +I C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHIN-AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSG 59
Query: 308 MVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYN 367
+A L M +I PD +T+S+LI+ K ++S A E+ EM TYN
Sbjct: 60 RWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 368 SLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK 427
S++D CK VD A + M +G PDVVT++ L++G CK R+ N E+F ++ +
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 428 GYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKA 487
G TY +I+G C+ G D A LL+EM G PD ITF ++ L K + KA
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 488 EKLLREM 494
+L ++
Sbjct: 240 FAILEDL 246
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 115/216 (53%)
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
M Q + +V + I+ LCK+ A NLF EM I P+ +TY+ +ID C SGR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
S A +L+ M K D T+++L++ K V +A + K+M I P +TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 404 LMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
++DG CK+ R+ +A+ + + KG V T++ +ING CK D + + EM +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 464 CIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ + +T+ T+I + GD A+ LL EM++ G+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 121/238 (50%)
Query: 49 LLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDD 108
++ T+ + + G +A ++ ++ +KG P+ +T +I C G A Q
Sbjct: 11 VISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRH 70
Query: 109 VVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
++ + + V++ LI + + + ++ +++ + P + YN++ID CK
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
V DA + M K SPDVVT+++L+ G+C ++ E+ EM R+ I + +T+ T
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
L+ + G++ A+++L M+ GV PD T++ ++ G C E+ KA AIL + +
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 225/473 (47%), Gaps = 37/473 (7%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ A + ++ K +PDA T LI G+ R A+ DD++ ++ +Y
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
LI G R +L++ +++ + V P++V +N ++ + + S A + F M K
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEM--TRKNIGPDVITFNTLVDALGKEGNVKE 241
V PD T+N ++Y +GQ +A +L + M R PDV+TF +++ +G ++
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+ V M+ +G+KP++ +YN+LM Y + A+++L + Q G+ P+V SY+ +++
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM------- 354
+++ +A +F M + P+ +TY++LID +G ++ A E+ +M
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 355 ----------------------------HNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
++G + YNS + + ++KAIAL
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+ MR + ++ D VT+ IL+ G C+ + A +++ +T Y+ ++ K+
Sbjct: 519 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 578
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G EA ++ ++M+ GC PD I + +++ A KA +L EM A G+
Sbjct: 579 GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 190/408 (46%), Gaps = 16/408 (3%)
Query: 25 PSFHSHSLSPSIHNA----DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSV 70
P +H++ S + + A+S F + G P F GQ A +
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 71 LGKILKKGY--RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
+ +K RPD VT T+++ +KGE+ + +VA G + N VSY L+
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV 188
G + +L +L ++ + + P+VV Y +++S + + A +F M ++ P+V
Sbjct: 366 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
VTYN+L+ + G L EA E+ +M + I P+V++ TL+ A + VL+
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
+G+ + YNS + Y E+ KAIA+ SM ++ V + +++I+I G C+
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
EA++ EME + I YSS++ K G+++ A + ++M G D Y S
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 605
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
+L S KA L +M GI+PD + + LM K G+ N
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN 653
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 185/392 (47%), Gaps = 11/392 (2%)
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLR--QVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
R + ++ LI+ L R G + + + +++ + N + YN +I + V A
Sbjct: 104 RFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDI-YNMMIRLHARHNWVDQA 162
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
LF EM PD TY++L+ GQ + A L+D+M R I P T+N L++A
Sbjct: 163 RGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINA 222
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
G GN +EA V M GV PDL T+N ++ Y + +KA++ M V P+
Sbjct: 223 CGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPD 282
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEM-----ECIKIIPDTITYSSLIDGLCKSGRISHA 347
+++III+ L K +AL+LF M EC PD +T++S++ G I +
Sbjct: 283 TTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC---RPDVVTFTSIMHLYSVKGEIENC 339
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+ + M +G + +YN+L+ A+++ ++ GI PDVV+Y L++
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 399
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
+ + A+EVF + + V TYN +I+ G EA+ + +ME G P+
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 468 AITFETIICALFEKGDNYKAEKLLREMMARGL 499
++ T++ A + +L +RG+
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 209/478 (43%), Gaps = 14/478 (2%)
Query: 28 HSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKK 77
H +S+ I N ++F ++ P+I+ + G +A SVLG I +
Sbjct: 328 HLYSVKGEIENCR---AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G PD V+ T L+ + +A + + + N V+Y LI G +
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+++ RQ+E +KPNVV T++ + + K + + S + ++ + YNS +
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 504
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
+ +L++A L M +K + D +TF L+ + EA + L M +
Sbjct: 505 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 564
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
Y+S++ Y ++ +A +I N M G P+V +Y+ ++H ++ +A LF
Sbjct: 565 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 624
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
EME I PD+I S+L+ K G+ S+ + L+D M K P + +
Sbjct: 625 EMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQ 684
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
+AI L + M + N ++ K G+++ ++F ++ G + ++TY
Sbjct: 685 EWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYA 744
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
I++ L G + + + +L M G P + II + E+ + E L+R+ +
Sbjct: 745 ILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII-SFGERSAGIEFEPLIRQKL 801
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 225/473 (47%), Gaps = 37/473 (7%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ A + ++ K +PDA T LI G+ R A+ DD++ ++ +Y
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
LI G R +L++ +++ + V P++V +N ++ + + S A + F M K
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEM--TRKNIGPDVITFNTLVDALGKEGNVKE 241
V PD T+N ++Y +GQ +A +L + M R PDV+TF +++ +G ++
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+ V M+ +G+KP++ +YN+LM Y + A+++L + Q G+ P+V SY+ +++
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM------- 354
+++ +A +F M + P+ +TY++LID +G ++ A E+ +M
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 355 ----------------------------HNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
++G + YNS + + ++KAIAL
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 386
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+ MR + ++ D VT+ IL+ G C+ + A +++ +T Y+ ++ K+
Sbjct: 387 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 446
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G EA ++ ++M+ GC PD I + +++ A KA +L EM A G+
Sbjct: 447 GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 190/408 (46%), Gaps = 16/408 (3%)
Query: 25 PSFHSHSLSPSIHNA----DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSV 70
P +H++ S + + A+S F + G P F GQ A +
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 173
Query: 71 LGKILKKGY--RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
+ +K RPD VT T+++ +KGE+ + +VA G + N VSY L+
Sbjct: 174 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 233
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV 188
G + +L +L ++ + + P+VV Y +++S + + A +F M ++ P+V
Sbjct: 234 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 293
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
VTYN+L+ + G L EA E+ +M + I P+V++ TL+ A + VL+
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 353
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
+G+ + YNS + Y E+ KAIA+ SM ++ V + +++I+I G C+
Sbjct: 354 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 413
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
EA++ EME + I YSS++ K G+++ A + ++M G D Y S
Sbjct: 414 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 473
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
+L S KA L +M GI+PD + + LM K G+ N
Sbjct: 474 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN 521
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 167/350 (47%), Gaps = 8/350 (2%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+YN +I + V A LF EM PD TY++L+ GQ + A L+D+M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
R I P T+N L++A G GN +EA V M GV PDL T+N ++ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-----ECIKIIPDTI 329
+KA++ M V P+ +++III+ L K +AL+LF M EC PD +
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC---RPDVV 189
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
T++S++ G I + + + M +G + +YN+L+ A+++ +
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ GI PDVV+Y L++ + + A+EVF + + V TYN +I+ G
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EA+ + +ME G P+ ++ T++ A + +L +RG+
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 208/476 (43%), Gaps = 14/476 (2%)
Query: 28 HSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKK 77
H +S+ I N ++F ++ P+I+ + G +A SVLG I +
Sbjct: 196 HLYSVKGEIENCR---AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G PD V+ T L+ + +A + + + N V+Y LI G +
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+++ RQ+E +KPNVV T++ + + K + + S + ++ + YNS +
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 372
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
+ +L++A L M +K + D +TF L+ + EA + L M +
Sbjct: 373 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 432
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
Y+S++ Y ++ +A +I N M G P+V +Y+ ++H ++ +A LF
Sbjct: 433 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 492
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
EME I PD+I S+L+ K G+ S+ + L+D M K P + +
Sbjct: 493 EMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQ 552
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
+AI L + M + N ++ K G+++ ++F ++ G + ++TY
Sbjct: 553 EWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYA 612
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLRE 493
I++ L G + + + +L M G P + II + E+ + E L+R+
Sbjct: 613 ILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII-SFGERSAGIEFEPLIRQ 667
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 188/377 (49%), Gaps = 1/377 (0%)
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
L+ L + T ++ +++ V N+ +YN ++ + K A L SEM K
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
V PD+ TYN+L+ +C EA + D M R + P+++T+N+ + +EG ++EA
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+ +K V + TY +L+DGYC +N+I++A+ + M RG +P V +Y+ I+ L
Sbjct: 294 RLFR-EIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
C++ + EA L EM KI PD IT ++LI+ CK + A ++ +M G D
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
++Y +L+ CK ++ A M ++G P TY+ L+DG + + ++ ++
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
+G V Y +I +CK D A L ME KG + D++ F T+ A + G
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 484 NYKAEKLLREMMARGLL 500
+A L M R L+
Sbjct: 533 VTEASALFDVMYNRRLM 549
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 195/383 (50%), Gaps = 7/383 (1%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+ L+ + G S+ + Q+ +KP++ +++SL K +L + +F +MV
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
V ++ YN L++ G ++A +LL EM K + PD+ T+NTL+ K+
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
EA +V M + GV P++ TYNS + G+ + +A + + + VT N +Y+ +I
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLI 314
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
G C+ +DEAL L ME P +TY+S++ LC+ GRI A L+ EM K
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
D T N+L++ CK + A+ + KKM + G++ D+ +Y L+ G CK L+NA+E
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI---ICA 477
++ KG+ TY+ +++G + DE LL E E +G D + + IC
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICK 494
Query: 478 LFEKGDNYKAEKLLREMMARGLL 500
L E+ D A+ L M +GL+
Sbjct: 495 L-EQVDY--AKVLFESMEKKGLV 514
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 170/340 (50%), Gaps = 1/340 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G A +L ++ +KG PD T TLI C K AL D + G N V+Y
Sbjct: 217 GDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTY 276
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+ I G R G+ R + +L R+++ V N V Y T+ID C+ + +A L M
Sbjct: 277 NSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMES 335
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ SP VVTYNS+L C G+++EA LL EM+ K I PD IT NTL++A K ++
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A V M++ G+K D+++Y +L+ G+C V E+ A L SM ++G +P +YS ++
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVD 455
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
G DE L E E + D Y LI +CK ++ +A L + M KG
Sbjct: 456 GFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
D + ++ ++ V +A AL M ++ + ++ Y
Sbjct: 516 DSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 193/407 (47%), Gaps = 11/407 (2%)
Query: 40 DDAISIFNRLLGTSPTP----------SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
+D+I +F ++ P S+++ + + + K++K G + L
Sbjct: 150 NDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVL 209
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ G+ +A + ++ +G + +Y TLI C+ +L + ++E V
Sbjct: 210 VHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGV 269
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
PN+V YN+ I ++ + +A LF E + V+ + VTY +L+ G+C + + EA
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALR 328
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L + M + P V+T+N+++ L ++G ++EA +L M + ++PD T N+L++ YC
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ ++ A+ + M + G+ +++SY +IHG CK ++ A M P
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA 448
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TYS L+DG + +L++E +G AD Y L+ +CK VD A L + M
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESM 508
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
+G+ D V + + + G++ A +F + + V ++ Y
Sbjct: 509 EKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 150/299 (50%), Gaps = 22/299 (7%)
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
K A +LLD++ ++ + + +LV G V E ++ ++
Sbjct: 95 HFKTAHQLLDKLAQRELLSSPLVLRSLV------GGVSEDPEDVS-----------HVFS 137
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
LM Y IN +I + + G+ P++ + +++++ L K ++ D +F +M +
Sbjct: 138 WLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKL 197
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
++ + Y+ L+ KSG A +L+ EM KG D FTYN+L+ V CK +A
Sbjct: 198 GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV--IKGYHVTVRTYNIMI 440
+++ +M G+ P++VTYN + G +EGR++ A +F+++ + HV TY +I
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV---TYTTLI 314
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+G C+ DEAL L ME +G P +T+ +I+ L E G +A +LL EM + +
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 175/380 (46%), Gaps = 38/380 (10%)
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT--YNSLLYGFCIVGQLKEATELLDEM 214
+ ++D L + +L+S L S + P+ V+ ++ L+ + G + ++ + +++
Sbjct: 100 HQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQI 159
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
+ P + L+++L K+ + M+K GV ++ YN L+ +
Sbjct: 160 RSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDP 219
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
KA +L+ M ++GV P++ +Y+ +I CK M EAL++ ME + P+ +TY+S
Sbjct: 220 EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSF 279
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I G + GR+ A L E+ + A+ TY +L+D C+ + +D+A+ L + M +G
Sbjct: 280 IHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGF 338
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQD------------------------------- 423
P VVTYN ++ LC++GR++ A + +
Sbjct: 339 SPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK 398
Query: 424 ----LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
++ G + + +Y +I+G CK + A L M +KG P T+ ++ +
Sbjct: 399 VKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFY 458
Query: 480 EKGDNYKAEKLLREMMARGL 499
+ + KLL E RGL
Sbjct: 459 NQNKQDEITKLLEEFEKRGL 478
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 107/223 (47%)
Query: 77 KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRA 136
+G+ P VT ++++ LC G +R A + ++ + + ++ TLI C++ +
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
++++ +++ +K ++ Y +I CK + +A M+ K SP TY+ L+
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVD 455
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
GF + E T+LL+E ++ + DV + L+ + K V AK + M K+G+
Sbjct: 456 GFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
D + ++ Y ++ +A A+ + M R + N+ Y I
Sbjct: 516 DSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 2/216 (0%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
E G+I A +L ++ K PD +T TLI C ++ A++ ++ G +L+
Sbjct: 354 EDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMY 413
Query: 120 SYGTLIKGLCRMGQTR-ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
SY LI G C++ + A +L +E P Y+ ++D + L E
Sbjct: 414 SYKALIHGFCKVLELENAKEELFSMIEKGF-SPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
+ + DV Y L+ C + Q+ A L + M +K + D + F T+ A + G
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
V EA + VM + + +L Y S+ Y N++
Sbjct: 533 VTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDV 568
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 238/511 (46%), Gaps = 56/511 (10%)
Query: 43 ISIFNRLLGTSP--TPSIIEFGQIPSAFSVLGKIL----------KKGYRPDAVTLTTLI 90
+ + +RL+G PS+ + ++ + + +++ +G+ PD VT TTLI
Sbjct: 145 LGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLI 204
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL-- 148
G C E+ A + D++ G R N ++ LI G +M +L++++ ++
Sbjct: 205 GGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKN 264
Query: 149 ---VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV------------------------ 181
+ ++DS+C++ +D F + M +
Sbjct: 265 ETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNH 324
Query: 182 -----------KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
K + P +YN++++G C G A +LL+E + P T+ L+
Sbjct: 325 GAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLM 384
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
++L KE + +A+NVL +M+++ YN + G C+++ + + +L SM Q
Sbjct: 385 ESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII-PDTITYSSLIDGLCKSGRISHAWE 349
P+ ++ + +I+GLCK VD+A+ + +M K PD +T ++++ GL GR A +
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 350 LVDEM--HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+++ + NK +P YN+++ L K H D+A+++ ++ + D TY I++DG
Sbjct: 505 VLNRVMPENKIKPG-VVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
LC ++ A++ + D++ Y + GLC+ G +A L ++ D G IP+
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 468 AITFETIICALFEKGDNYKAEKLLREMMARG 498
+ + T+I G +A ++L EM G
Sbjct: 624 VVCYNTVIAECSRSGLKREAYQILEEMRKNG 654
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 164/331 (49%), Gaps = 2/331 (0%)
Query: 111 ARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVS 170
++G + + SY +I GLC+ G + QLL + P+ Y +++SLCK+
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
A N+ M+ K+ + YN L G C++ E +L M + + PD T NT++
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 231 DALGKEGNVKEAKNVLAVMMK-QGVKPDLFTYNSLMDGYCLVNEINKAIAILNS-MAQRG 288
+ L K G V +A VL MM + PD T N++M G +A+ +LN M +
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+ P V +Y+ +I GL K DEA+++F ++E + D+ TY+ +IDGLC + ++ A
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAK 574
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
+ D++ D F Y + L LC+S ++ A + D G P+VV YN ++
Sbjct: 575 KFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAEC 634
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
+ G + A ++ +++ G T+ I+
Sbjct: 635 SRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 224/509 (44%), Gaps = 62/509 (12%)
Query: 33 SPSIHNADDAI-------SIFNRLLGTSPTPSIIEFGQIP-SAFSVLGKILKKGYRPDAV 84
S + DDAI S+ +R SI + P A +L + +GYRPD++
Sbjct: 32 SDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSL 91
Query: 85 TLTTLIKGLCLKGEV----RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
L+++I LC G RR L F +A GF ++ + +I L ++L +
Sbjct: 92 NLSSVIHSLCDAGRFDEAHRRFLLF----LASGFIPDERTCNVIIARLLYSRSPVSTLGV 147
Query: 141 LRQVEGHLVK--PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+ ++ G + P++ YN +++ LC V DA L +M + PDVVT+ +L+ G+
Sbjct: 148 IHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK--------------- 243
C + +L+ A ++ DEM I P+ +T + L+ K +V+ +
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETD 267
Query: 244 ---------NVLAVMMKQGVKPDL----------------FTYNSLMDGYCLVNEINKAI 278
N++ M ++G D+ F Y ++D C + A
Sbjct: 268 TSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAA 327
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
I+ M +G+ P SY+ IIHGLCK+ A L E + P TY L++ L
Sbjct: 328 RIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESL 387
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
CK A +++ M K YN L LC + + + + M +PD
Sbjct: 388 CKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDE 447
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV-TVRTYNIMINGLCKEGLFDEALALLS 457
T N +++GLCK GR+ +A +V D++ + T N ++ GL +G +EAL +L+
Sbjct: 448 YTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLN 507
Query: 458 E-MEDKGCIPDAITFETIICALFE--KGD 483
M + P + + +I LF+ KGD
Sbjct: 508 RVMPENKIKPGVVAYNAVIRGLFKLHKGD 536
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 39 ADDAISIFNRLLGTSP-TPSIIEFGQI----------PSAFSVLGKILKKGYRPDAVTLT 87
A++A+ + NR++ + P ++ + + A SV G++ K D+ T
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYA 558
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
+I GLC+ +V A +F DDV+ R + Y +KGLC+ G + L +
Sbjct: 559 IIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADS 618
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSL 194
PNVV YNT+I + L +A+ + EM +PD VT+ L
Sbjct: 619 GAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 123/269 (45%), Gaps = 7/269 (2%)
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
N EA +L + +G +PD +S++ C ++A G P+ + +
Sbjct: 70 NPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCN 129
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIK--IIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
+II L ++ L + + K +P Y+ L++ LC R+ A +LV +M
Sbjct: 130 VIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMR 189
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
N+G D T+ +L+ C+ ++ A + +MR GI+P+ +T ++L+ G K ++
Sbjct: 190 NRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVE 249
Query: 416 NAQEVFQDLVIKGYHVT-----VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
+++ ++L + T + +++ +C+EG F++ + M +
Sbjct: 250 TGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA 309
Query: 471 FETIICALFEKGDNYKAEKLLREMMARGL 499
+ +I +L N+ A +++ M ++GL
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGL 338
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 217/467 (46%), Gaps = 51/467 (10%)
Query: 84 VTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQ 143
++ TT+++ L L L+F D V +GF + S+ +++ L R + L
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFS 125
Query: 144 VEGH---LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY---- 196
+E VK +N++I S L ++ LF M +SP V+T+NSLL
Sbjct: 126 IERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 197 --------------------------------GFCIVGQLKEATELLDEMTRKNIGPDVI 224
GFC + EA + +M + PDV+
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQG--VKPDLFTYNSLMDGYCLVNEINKAIAILN 282
T+NT++D L + G VK A NVL+ M+K+ V P++ +Y +L+ GYC+ EI++A+ + +
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF--AEMECIKIIPDTITYSSLIDGLCK 340
M RG+ PN +Y+ +I GL + DE ++ PD T++ LI C
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI------ 394
+G + A ++ EM N D +Y+ L+ LC + D+A L ++ ++ +
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 425
Query: 395 -QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
+P YN + + LC G+ K A++VF+ L+ +G +Y +I G C+EG F A
Sbjct: 426 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAY 484
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
LL M + +PD T+E +I L + G+ A L+ M+ L
Sbjct: 485 ELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL 531
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 212/410 (51%), Gaps = 17/410 (4%)
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL---LR 142
+LI+ G + +++ + G + +++ +L+ L + G+T + L +R
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 143 QVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVG 202
+ G V P+ +NT+I+ CK+ +V +AF +F +M + +PDVVTYN+++ G C G
Sbjct: 201 RTYG--VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 203 QLKEATELLDEMTRK--NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
++K A +L M +K ++ P+V+++ TLV + + EA V M+ +G+KP+ T
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 261 YNSLMDGYCLVNEIN--KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
YN+L+ G + + K I I + A P+ +++I+I C +D A+ +F E
Sbjct: 319 YNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK----GQPADK---FTYNSLLD 371
M +K+ PD+ +YS LI LC A L +E+ K G+ K YN + +
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
LC + +A + +++ +G+Q D +Y L+ G C+EG+ K A E+ ++ + +
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVP 497
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+ TY ++I+GL K G A L M +P A TF +++ L ++
Sbjct: 498 DLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKR 547
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 210/469 (44%), Gaps = 81/469 (17%)
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
+L + +LI+ G + S++L + ++ + P+V+ +N+++ L K A +
Sbjct: 135 KLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHD 194
Query: 175 LFSEMV-VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
LF EM V+PD T+N+L+ GFC + EA + +M + PDV+T+NT++D L
Sbjct: 195 LFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 234 GKEGNVKEAKNVLAVMMKQG--VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ G VK A NVL+ M+K+ V P++ +Y +L+ GYC+ EI++A+ + + M RG+ P
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 292 NVHSYSIIIHGL-------------------------------------CKNKMVDEALN 314
N +Y+ +I GL C +D A+
Sbjct: 315 NAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMK 374
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK----GQPADK---FTYN 367
+F EM +K+ PD+ +YS LI LC A L +E+ K G+ K YN
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYN 434
Query: 368 SLLDVLCKSHHVDKAIALTKKMRDQGIQ-------------------------------- 395
+ + LC + +A + +++ +G+Q
Sbjct: 435 PMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRRE 494
Query: 396 --PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
PD+ TY +L+DGL K G A + Q ++ Y T++ ++ L K +E+
Sbjct: 495 FVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESF 554
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
L++ M +K + ++ LF KA ++R + G L K
Sbjct: 555 CLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVK 603
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 210/450 (46%), Gaps = 35/450 (7%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKG--YRPDAVTLT 87
D+A IF + P ++ + G++ A +VL +LKK P+ V+ T
Sbjct: 226 DEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYT 285
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
TL++G C+K E+ A+ D+++RG + N V+Y TLIKGL + +L + G+
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGN 343
Query: 148 ----LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ 203
P+ +N +I + C + A +F EM+ K+ PD +Y+ L+ C+ +
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 204 LKEATELLDEMTRKNI-------GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
A L +E+ K + P +N + + L G K+A+ V +MK+GV+
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ- 462
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL--- 313
D +Y +L+ G+C + A +L M +R P++ +Y ++I GL K + EAL
Sbjct: 463 DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK---IGEALLAH 519
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
+ M +P T+ S++ L K + ++ LV M K + ++ +L
Sbjct: 520 DTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLL 579
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
S +KA + + + D G +V L+ LC+ +L +A + + K V +
Sbjct: 580 FSSAQKEKAFLIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDI 636
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKG 463
T N +I GLCK EA +L +E+ + G
Sbjct: 637 DTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 191/387 (49%), Gaps = 27/387 (6%)
Query: 27 FHSHSLSP--SIHNADDAISIFNRLLGTSPT--PSIIEF------------GQIPSAFSV 70
FH+ L SI +D + +F +L + P P F I + V
Sbjct: 87 FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRV 146
Query: 71 LGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCR 130
L ++ G PD VT ++ LC G V A ++ + + +Y L+K LC+
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 131 MGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ + ++ VKP++V + +ID++C K + +A L S++ PD
Sbjct: 207 CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
YN+++ GFC + + EA + +M + + PD IT+NTL+ L K G V+EA+ L M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
+ G +PD TY SLM+G C E A+++L M RG PN +Y+ ++HGLCK +++
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
D+ + L+ M+ + ++ Y++L+ L KSG+++ A+E+ D + +D Y++L
Sbjct: 387 DKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQP 396
+ + KK ++QG+ P
Sbjct: 447 ----------ETTLKWLKKAKEQGLVP 463
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 212/446 (47%), Gaps = 38/446 (8%)
Query: 24 KPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDA 83
+PS + SP N DA S+FN + TS P ++F SVL D
Sbjct: 53 EPSLRNPFKSP---NLSDAKSLFNSIAATSRIPLDLKFHN-----SVLQSYGSIAVVNDT 104
Query: 84 VTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS--LQLL 141
V L I LK + FR + ++ L+ CR + S ++L
Sbjct: 105 VKLFQHI----LKSQP-------------NFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+ + ++P+ V + + SLC+ V +A +L E+ K PD TYN LL C
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 202 GQLKEATELLDEMTRK-NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
L E +DEM ++ PD+++F L+D + N++EA +++ + G KPD F
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
YN++M G+C +++ ++A+ + M + GV P+ +Y+ +I GL K V+EA M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
PDT TY+SL++G+C+ G A L++EM +G + TYN+LL LCK+ +D
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
K + L + M+ G++ + Y L+ L K G++ A EVF V Y+ +
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL- 446
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIP 466
+ L L + +++G +P
Sbjct: 447 ---------ETTLKWLKKAKEQGLVP 463
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 168/316 (53%), Gaps = 6/316 (1%)
Query: 169 VSDAFNLFSEMVVKKVSP-DVVTYNSLLYGFCIVGQLKEATELLDEM--TRKNIGPDVIT 225
+SDA +LF+ + P D+ +NS+L + + + + +L + ++ N P T
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 226 FNTLVD--ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
F L+ + ++ VL +M+ G++PD T + + C +++A ++
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGLCKSG 342
+ ++ P+ ++Y+ ++ LCK K + EM + + PD ++++ LID +C S
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
+ A LV ++ N G D F YN+++ C +A+ + KKM+++G++PD +TYN
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
L+ GL K GR++ A+ + +V GY TY ++NG+C++G AL+LL EME +
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR 364
Query: 463 GCIPDAITFETIICAL 478
GC P+ T+ T++ L
Sbjct: 365 GCAPNDCTYNTLLHGL 380
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 187/401 (46%), Gaps = 16/401 (3%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
P+ +L + + L+FH+ V+ SYG++ + T Q
Sbjct: 63 PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQ--------SYGSI----AVVNDTVKLFQH 110
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCK--DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+ + + + +P + ++ C+ D +S+ + + MV + PD VT + +
Sbjct: 111 ILKSQPNF-RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSL 169
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ-GVKPD 257
C G++ EA +L+ E+T K+ PD T+N L+ L K ++ + M VKPD
Sbjct: 170 CETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPD 229
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
L ++ L+D C + +A+ +++ + G P+ Y+ I+ G C EA+ ++
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYK 289
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
+M+ + PD ITY++LI GL K+GR+ A + M + G D TY SL++ +C+
Sbjct: 290 KMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
A++L ++M +G P+ TYN L+ GLCK + E+++ + G + Y
Sbjct: 350 ESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYA 409
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
++ L K G EA + D + DA + T+ L
Sbjct: 410 TLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 170/333 (51%), Gaps = 5/333 (1%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS--PDVVTYNSLLYGFCIV--GQLKEATEL 210
+N+++ S +V+D LF ++ + + P T+ LL C + +
Sbjct: 87 FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRV 146
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
L+ M + PD +T + V +L + G V EAK+++ + ++ PD +TYN L+ C
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 271 VNEINKAIAILNSMAQR-GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+++ ++ M V P++ S++I+I +C +K + EA+ L +++ PD
Sbjct: 207 CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
Y++++ G C + S A + +M +G D+ TYN+L+ L K+ V++A K M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
D G +PD TY LM+G+C++G A + +++ +G TYN +++GLCK L
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKG 482
D+ + L M+ G ++ + T++ +L + G
Sbjct: 387 DKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 212/432 (49%), Gaps = 20/432 (4%)
Query: 84 VTLTTLIKGLCLKGEVRRALQFHDDVVAR---GFRLNQVSYGTLIKGLCRMGQTRASLQL 140
+T + +IK + + +V +++ D A G+ +Q S+G ++ L + +A+ L
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKD----KLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
+ +++ N V+ I+ S+C+ D+ +F +M P Y ++L
Sbjct: 74 IVRMKIE----NCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK-EGNVKEAKNVLAVMMKQGVK 255
QL A + M + P V + N L+ AL + +G V + M K+G
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
PD +TY +L+ G C I++A + M ++ P V +Y+ +I+GLC +K VDEA+
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
EM+ I P+ TYSSL+DGLCK GR A EL + M +G + TY +L+ LCK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG------- 428
+ +A+ L +M QG++PD Y ++ G C + + A ++++ G
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE 488
+++ V+T N ++ GLC A L M +G + T E+++ L +KG+ KA
Sbjct: 370 WNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAV 428
Query: 489 KLLREMMARGLL 500
+L+ E++ G +
Sbjct: 429 QLVDEIVTDGCI 440
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 180/366 (49%), Gaps = 24/366 (6%)
Query: 36 IHNADDAISIFNRLLGTSPTPS----------IIEFGQIPSAFSVLGKILKKGYRPDAVT 85
+H D++ +F+++ PS ++E Q+ AF + + G P +
Sbjct: 99 VHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVAS 158
Query: 86 LTTLIKGLCLK-GEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
L LIK LC G V L+ ++ RG + +YGTLI GLCR G+ + +L ++
Sbjct: 159 LNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
P VV Y ++I+ LC K V +A EM K + P+V TY+SL+ G C G+
Sbjct: 219 VEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+A EL + M + P+++T+ TL+ L KE ++EA +L M QG+KPD Y +
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI-------IIHGLCKNKMVDEALNLFA 317
+ G+C +++ +A L+ M G+TPN +++I ++ GLC N A L+
Sbjct: 339 ISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYL 397
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
M I + T SL+ LCK G A +LVDE+ G K T+ L+ H
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI-----GH 452
Query: 378 HVDKAI 383
+DK I
Sbjct: 453 TLDKTI 458
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 172/344 (50%), Gaps = 9/344 (2%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK-DKLVSDAFNL 175
+Q +Y T++ L Q + + + + + P V N +I +LC+ D V +
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKI 179
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F EM + PD TY +L+ G C G++ EA +L EM K+ P V+T+ +L++ L
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
NV EA L M +G++P++FTY+SLMDG C +A+ + M RG PN+ +
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y+ +I GLCK + + EA+ L M + PD Y +I G C + A +DEM
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 356 NKGQPADKFTYN-------SLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
G ++ T+N ++ LC +++ +A L MR +GI +V T L+ L
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCL 418
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
CK+G + A ++ ++V G + T+ ++I + + EA
Sbjct: 419 CKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 227/447 (50%), Gaps = 9/447 (2%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
++ +I + V ++ GY + T +I C + ++ AL ++ G N
Sbjct: 193 LLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPN 252
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQV---EGHLVKPNVVMYNTIIDSLCKDKLVSDAFN 174
VS+ +I G C+ G R +LQLL ++ G+ V PN V YN++I+ CK + A
Sbjct: 253 VVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAER 312
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
+ +MV V + TY +L+ + G EA L DEMT K + + + +N++V L
Sbjct: 313 IRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLF 372
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
EG+++ A +VL M + ++ D FT ++ G C + +A+ ++++ + ++
Sbjct: 373 MEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIV 432
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
++ ++H ++K + A + M + D I++ +LIDG K G++ A E+ D M
Sbjct: 433 CHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM 492
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+ ++ YNS+++ L K A A+ M + D+VTYN L++ K G +
Sbjct: 493 IKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNV 548
Query: 415 KNAQEVFQDLVIKG--YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
+ A ++ + + V++ T+NIMIN LCK G +++A +L M ++G +PD+IT+
Sbjct: 549 EEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYG 608
Query: 473 TIICALFEKGDNYKAEKLLREMMARGL 499
T+I + + K +L ++ +G+
Sbjct: 609 TLITSFSKHRSQEKVVELHDYLILQGV 635
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 228/462 (49%), Gaps = 21/462 (4%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKK----GYRPDAVTLTTLIKGLCL 95
DDA+SI L+ G+ S VL +++ G PD +L++
Sbjct: 111 DDALSIMANLMSVE--------GEKLSPLHVLSGLIRSYQACGSSPD--VFDSLVRACTQ 160
Query: 96 KGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVM 155
G+ + A + + A GF ++ + + L + + ++ ++++ NV
Sbjct: 161 NGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNT 220
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM- 214
+N +I S CK+ + +A ++F M+ V P+VV++N ++ G C G ++ A +LL +M
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 215 --TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
+ + P+ +T+N++++ K G + A+ + M+K GV + TY +L+D Y
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG 340
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
++A+ + + M +G+ N Y+ I++ L ++ A+++ +M + D T +
Sbjct: 341 SSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA 400
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
++ GLC++G + A E ++ K D +N+L+ + + A + M Q
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
G+ D +++ L+DG KEG+L+ A E++ ++ + YN ++NGL K G+ A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
A+++ ME I D +T+ T++ + G+ +A+ +L +M
Sbjct: 521 EAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 222/444 (50%), Gaps = 9/444 (2%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G A+ V+ + +G+ L + L E+ R + + ++ + G+ N ++
Sbjct: 162 GDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTF 221
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+I C+ + +L + ++ V PNVV +N +ID CK + A L +M +
Sbjct: 222 NLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGM 281
Query: 182 KK---VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
VSP+ VTYNS++ GFC G+L A + +M + + + T+ LVDA G+ G+
Sbjct: 282 MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGS 341
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
EA + M +G+ + YNS++ + +I A+++L M + + + + +I
Sbjct: 342 SDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
++ GLC+N V EA+ ++ K++ D + +++L+ + +++ A +++ M +G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
D ++ +L+D K +++A+ + M ++V YN +++GL K G A+
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME--DKGCIPDAITFETIIC 476
V + IK + TYN ++N K G +EA +LS+M+ D +TF +I
Sbjct: 522 AVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 477 ALFEKGDNYKAEKLLREMMARGLL 500
L + G KA+++L+ M+ RG++
Sbjct: 578 HLCKFGSYEKAKEVLKFMVERGVV 601
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 212/424 (50%), Gaps = 17/424 (4%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDV--VARGF-RLNQVSYGT 123
A SV ++LK G P+ V+ +I G C G++R ALQ + ++ F N V+Y +
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNS 296
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNV----VMYNTIIDSLCKDKLVSDAFNLFSEM 179
+I G C+ G+ L L ++ G +VK V Y ++D+ + +A L EM
Sbjct: 297 VINGFCKAGR----LDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEM 352
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
K + + V YNS++Y + G ++ A +L +M KN+ D T +V L + G V
Sbjct: 353 TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYV 412
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
KEA + ++ + D+ +N+LM + ++ A IL SM +G++ + S+ +
Sbjct: 413 KEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTL 472
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I G K ++ AL ++ M + + + Y+S+++GL K G A +V+ M K
Sbjct: 473 IDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK-- 530
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV--VTYNILMDGLCKEGRLKNA 417
D TYN+LL+ K+ +V++A + KM+ Q + V VT+NI+++ LCK G + A
Sbjct: 531 --DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+EV + +V +G TY +I K ++ + L + +G P + +I+
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRP 648
Query: 478 LFEK 481
L ++
Sbjct: 649 LLDR 652
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 183/406 (45%), Gaps = 54/406 (13%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKI-LKKG--YRPDAVTLT 87
+A+S+F R+L P+++ F G + A +LGK+ + G P+AVT
Sbjct: 236 EALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYN 295
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
++I G C G + A + D+V G N+ +YG L+ R G + +L+L ++
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
+ N V+YN+I+ L + + A ++ +M K + D T ++ G C G +KEA
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
E +++ K + D++ NTL+ ++ + A +L M+ QG+ D ++ +L+DG
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
Y ++ +A+ I + M + T N+ Y+ I++GL K M A + ME I D
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKD 531
Query: 328 TITYSSL-------------------------------------IDGLCKSGRISHAWEL 350
+TY++L I+ LCK G A E+
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
+ M +G D TY +L+ K +K + L + QG+ P
Sbjct: 592 LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 221 PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI 280
PDV F++LV A + G+ + A V+ +G + N+ M VNEI++ +
Sbjct: 148 PDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKV 205
Query: 281 LNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
M G NV++++++I+ CK + EAL++F M + P+ ++++ +IDG CK
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 341 SGRISHAWELVDEMHNKGQPADKF------TYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
+G + A +L+ +M G + F TYNS+++ CK+ +D A + M G+
Sbjct: 266 TGDMRFALQLLGKM---GMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
+ TY L+D + G A + ++ KG V YN ++ L EG + A++
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLE 501
+L +M K D T ++ L G +A + R++ + L+E
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVE 429
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 41/279 (14%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFH---------DDVV-- 110
G I A SVL + K + D T +++GLC G V+ A++F +D+V
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH 434
Query: 111 ------------------------ARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
+G L+ +S+GTLI G + G+ +L++ +
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
N+V+YN+I++ L K + A + + M +K D+VTYN+LL G ++E
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEE 550
Query: 207 ATELLDEMTRKNIGPDV--ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
A ++L +M +++ V +TFN +++ L K G+ ++AK VL M+++GV PD TY +L
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+ + K + + + + +GVTP+ H Y I+ L
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 197/384 (51%), Gaps = 10/384 (2%)
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
L++ G+ +S+++ ++ VK +V NT+++ L +++ F+L M
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ----RFDLVHAMFKNS 181
Query: 184 -----VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
++P++ T N L+ C ++ A ++LDE+ + P+++T+ T++ G+
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGD 241
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
++ AK VL M+ +G PD TY LMDGYC + ++A +++ M + + PN +Y +
Sbjct: 242 MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I LCK K EA N+F EM +PD+ +ID LC+ ++ A L +M
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
D ++L+ LCK V +A L + ++G P ++TYN L+ G+C++G L A
Sbjct: 362 CMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
++ D+ + TYN++I GL K G E + +L EM + GC P+ TF + L
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Query: 479 FEKGDNYKAEKLLREMMARGLLEK 502
+ G A K++ + G ++K
Sbjct: 481 QKLGKEEDAMKIVSMAVMNGKVDK 504
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 191/369 (51%), Gaps = 4/369 (1%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCL--KGEVRRALQFHDDVVARGFRLNQV 119
G+ S+ + +I G + +L TL+ L + ++ A+ F + + G N
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAM-FKNSKESFGITPNIF 192
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+ L+K LC+ ++ ++L ++ + PN+V Y TI+ + A + EM
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ + PD TY L+ G+C +G+ EA ++D+M + I P+ +T+ ++ AL KE
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
EA+N+ M+++ PD ++D C +++++A + M + P+ S +
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
IH LCK V EA LF E E IP +TY++LI G+C+ G ++ A L D+M+ +
Sbjct: 373 IHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
+ FTYN L++ L K+ +V + + + ++M + G P+ T+ IL +GL K G+ ++A +
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMK 491
Query: 420 VFQDLVIKG 428
+ V+ G
Sbjct: 492 IVSMAVMNG 500
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 115/229 (50%), Gaps = 1/229 (0%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+ G+ A +V+ + K P+ VT +I+ LC + + A D+++ R F +
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+I LC + + L R++ + P+ + +T+I LCK+ V++A LF E
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
K P ++TYN+L+ G C G+L EA L D+M + P+ T+N L++ L K GNV
Sbjct: 393 -EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNV 451
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
KE VL M++ G P+ T+ L +G + + A+ I++ G
Sbjct: 452 KEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 39 ADDAISIFNRLLGTSPTP----------SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTT 88
+ +A ++F+ +L S P ++ E ++ A + K+LK PD L+T
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
LI LC +G V A + D+ +G + ++Y TLI G+C G+ + +L +
Sbjct: 372 LIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
KPN YN +I+ L K+ V + + EM+ P+ T+ L G +G+ ++A
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 209 ELL 211
+++
Sbjct: 491 KIV 493
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 212/412 (51%), Gaps = 7/412 (1%)
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ LC + RA D + G + ++Y TLIKG R + + R++ +
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+P+V YN++I K+ +++ LF EM+ +SPD+ +YN+L+ + +G+ EA +
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 210 LLDE-MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
+L E + + P + T+N L+DAL K G+ A + +K VKP+L TYN L++G
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNILINGL 198
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
C + ++ + + G TPN +Y+ ++ K K +++ L LF +M+ D
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKG-QPADKFTYNSLLDVLCKSHHVDKAIALTK 387
+++ L K+GR A+E + E+ G + D +YN+LL++ K ++D L +
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
++ +G++PD T+ I+++GL G A++ + G +V T N +I+GLCK G
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D A+ L + ME + D T+ +++ L + G A KLL +G+
Sbjct: 379 HVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 174/339 (51%), Gaps = 3/339 (0%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+ N ++SLCK + + A L + + V PDV+TYN+L+ G+ + EA + M
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
I PDV T+N+L+ K + + M+ G+ PD+++YN+LM Y +
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 275 NKAIAILNS-MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+A IL+ + G+ P + +Y+I++ LCK+ D A+ LF ++ ++ P+ +TY+
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNI 193
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
LI+GLCKS R+ ++ E+ G + TY ++L + K+ ++K + L KM+ +G
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT-VRTYNIMINGLCKEGLFDEA 452
D ++ L K GR + A E +LV G + +YN ++N K+G D
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAV 313
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
LL E+E KG PD T I+ L G+ AEK L
Sbjct: 314 DDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 152/274 (55%), Gaps = 2/274 (0%)
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
N V++L K N++ A+ +L ++ GV PD+ TYN+L+ GY I++A A+ M
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
+ G+ P+V +Y+ +I G KN M++ L LF EM + PD +Y++L+ K GR
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 346 HAWELVDE-MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
A++++ E +H G TYN LLD LCKS H D AI L K ++ + ++P+++TYNIL
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNIL 194
Query: 405 MDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGC 464
++GLCK R+ + + ++L GY TY M+ K ++ L L +M+ +G
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 465 IPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
D ++ AL + G +A + + E++ G
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 185/387 (47%), Gaps = 9/387 (2%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
F I A++V ++ + G PD T +LI G + R LQ D+++ G +
Sbjct: 60 RFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMW 119
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVK--PNVVMYNTIIDSLCKDKLVSDAFNLFS 177
SY TL+ ++G+ + ++L + + HL P + YN ++D+LCK +A LF
Sbjct: 120 SYNTLMSCYFKLGRHGEAFKILHE-DIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK 178
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
+ +V P+++TYN L+ G C ++ ++ E+ + P+ +T+ T++ K
Sbjct: 179 HLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTK 237
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV-TPNVHSY 296
+++ + M K+G D F +++ +A ++ + + G + ++ SY
Sbjct: 238 RIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSY 297
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+ +++ K+ +D +L E+E + PD T++ +++GL G A + + +
Sbjct: 298 NTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGE 357
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
G T N L+D LCK+ HVD+A+ L M + D TY ++ LCK+GRL
Sbjct: 358 MGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVC 413
Query: 417 AQEVFQDLVIKGYHVTVRTYNIMINGL 443
A ++ KG + +++G+
Sbjct: 414 ASKLLLSCYNKGMKIPSSARRAVLSGI 440
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 169/366 (46%), Gaps = 52/366 (14%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSA----------FSVLGKILKKGYRPDAVTLTTL 89
D+A ++ R+ P + + + S + ++L G PD + TL
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 90 IKGLCLKGEVRRALQ-FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
+ G A + H+D+ G +Y L+ LC+ G T +++L + ++
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR- 183
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL------------- 195
VKP ++ YN +I+ LCK + V + E+ +P+ VTY ++L
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGL 243
Query: 196 ----------YGF-----CIV-------GQLKEATELLDEMTRKNI-GPDVITFNTLVDA 232
Y F C V G+ +EA E + E+ R D++++NTL++
Sbjct: 244 QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNL 303
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
K+GN+ ++L + +G+KPD +T+ +++G + A L + + G+ P+
Sbjct: 304 YFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPS 363
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
V + + +I GLCK VD A+ LFA ME + D TY+S++ LCK GR+ A +L+
Sbjct: 364 VVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLL 419
Query: 353 EMHNKG 358
+NKG
Sbjct: 420 SCYNKG 425
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 232/479 (48%), Gaps = 44/479 (9%)
Query: 61 FGQ---IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD-DVVARGFRL 116
FG+ I SV+ + K G +P +++ L +K ++ A +F ++A G
Sbjct: 122 FGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL-VKEDIDIAREFFTRKMMASGIHG 180
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ +YG L+KGL + +LL+ ++ V PN V+YNT++ +LCK+ V A +L
Sbjct: 181 DVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLM 240
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
SEM P+ VT+N L+ +C +L ++ LL++ PDV+T +++ L E
Sbjct: 241 SEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE 296
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
G V EA VL + +G K D+ N+L+ GYC + ++ A M ++G PNV +Y
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+++I G C M+D AL+ F +M+ I + T+++LI GL GR ++++ M +
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 357 K----GQPADKFT-----------YNSLLDVLCK-----SHHVDKAIALTK--------- 387
G D + + L+ L K VD++ L
Sbjct: 417 SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDD 476
Query: 388 ------KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
+M +G P ++ + L+ + G+++ + E+ D+V +GY T+N +I
Sbjct: 477 LKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVII 536
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
G CK+ + + +M ++GC+PD ++ ++ L KGD KA L M+ + ++
Sbjct: 537 GFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 191/421 (45%), Gaps = 8/421 (1%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
+I F +L + G P+AV TL+ LC G+V RA ++ N V++
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFN 252
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
LI C + S+ LL + P+VV +++ LC + VS+A + + K
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
DVV N+L+ G+C +G+++ A EM RK P+V T+N L+ G + A
Sbjct: 313 GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT--PNVHSYSIII 300
+ M ++ + T+N+L+ G + + + IL M + Y+ +I
Sbjct: 373 LDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVI 432
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
+G K ++AL +ME K+ P + S + LC+ G + D+M +G
Sbjct: 433 YGFYKENRWEDALEFLLKME--KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV 490
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ L+ + +++++ L M +G P T+N ++ G CK+ ++ N +
Sbjct: 491 PSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKF 550
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+D+ +G +YN ++ LC +G +A L S M +K +PD + +++ L +
Sbjct: 551 VEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQ 610
Query: 481 K 481
K
Sbjct: 611 K 611
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 161/343 (46%), Gaps = 43/343 (12%)
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIG--PDVITFNTLVDALGKEGNVKEAKNVLA 247
TY +L + C+ + +LLDEM +IG PD F T++ G+ +K +V+
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMP-DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVD 136
Query: 248 VMMKQGVKP-----------------------------------DLFTYNSLMDGYCLVN 272
++ K G+KP D++TY LM G L N
Sbjct: 137 LVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTN 196
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
I +L M GV PN Y+ ++H LCKN V A +L +EM+ P+ +T++
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFN 252
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
LI C ++ + L+++ + G D T +++VLC V +A+ + +++ +
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
G + DVV N L+ G C G+++ AQ F ++ KGY V TYN++I G C G+ D A
Sbjct: 313 GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
L ++M+ + TF T+I L G K+L EMM
Sbjct: 373 LDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKIL-EMM 414
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 161/357 (45%), Gaps = 39/357 (10%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
+L K G+ PD VT+T +++ LC +G V AL+ + V ++G +++ V+ TL+KG C
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+G+ R + + ++E PNV YN +I C ++ A + F++M + +
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA 389
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNI--GPDVITFNTLVDALGKE----------- 236
T+N+L+ G I G+ + ++L+ M + G + +N ++ KE
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLL 449
Query: 237 ----------------------GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
G + + K M+ +G P + + L+ Y +I
Sbjct: 450 KMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+++ ++N M RG P +++ +I G CK V + +M +PDT +Y+ L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
++ LC G I AW L M K D ++SL+ C S AI + ++D
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQKT--AIHVNSSLQD 622
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 35/309 (11%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ A VL ++ KG + D V TL+KG C G++R A +F ++ +G+ N +Y
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI G C +G ++L ++ ++ N +NT+I L D + M
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 182 KKV--SPDVVTYNSLLYGFCIVGQLKEATELL---------------------------- 211
+ YN ++YGF + ++A E L
Sbjct: 417 SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDD 476
Query: 212 -----DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
D+M + P +I + L+ + G ++E+ ++ M+ +G P T+N+++
Sbjct: 477 LKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVII 536
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G+C +++ I + MA+RG P+ SY+ ++ LC + +A LF+ M I+P
Sbjct: 537 GFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVP 596
Query: 327 DTITYSSLI 335
D +SSL+
Sbjct: 597 DPSMWSSLM 605
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 16/217 (7%)
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGLCKSGRISH 346
G + +Y + H LC + D L EM + I + PD + ++I G ++ I
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA-LTKKMRDQGIQPDVVTYNILM 405
+VD + G +NS+LDVL K +D A T+KM GI DV TY ILM
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILM 189
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
GL R+ + ++ Q + G YN +++ LCK G A +L+SEM++
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE---- 245
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
P+ +TF +I A + +KL++ M+ LLEK
Sbjct: 246 PNDVTFNILISAYCNE------QKLIQSMV---LLEK 273
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
S+ E G + + +++ +G P + LI G++ +L+ +D+V RG+
Sbjct: 467 SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLP 526
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
++ +I G C+ + ++ + + P+ YN +++ LC + A+ LF
Sbjct: 527 RSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLF 586
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCI 200
S MV K + PD ++SL+ FC+
Sbjct: 587 SRMVEKSIVPDPSMWSSLM--FCL 608
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 19 FPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSII----------EFGQIPSAF 68
FP SF SL DD + +++++G PSII + G+I +
Sbjct: 455 FPRAVDRSFKLISLCEK-GGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 69 SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
++ ++ +GY P + T +I G C + +V ++F +D+ RG + SY L++ L
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 129 CRMGQ-TRASLQLLRQVEGHLVKPNVVMYNTII 160
C G +A L R VE +V P+ M+++++
Sbjct: 574 CVKGDIQKAWLLFSRMVEKSIV-PDPSMWSSLM 605
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 208/418 (49%), Gaps = 3/418 (0%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D V L+KG G V + +V+ GF ++ V+ L+ GL ++ Q+
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+ + PN +N + + C D + + +M + PD+VTYN+L+ +C
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
G+LKEA L M R+ + PD++T+ +L+ L K+G V+EA M+ +G+KPD +Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N+L+ YC + ++ +L+ M V P+ + +I+ G + + A+N E+
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 322 IKI-IPDTITYSSLIDGLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLCKSHHV 379
+K+ IP + LI LC+ G+ A L+D + +G A TYN+L++ L + +
Sbjct: 405 LKVDIPFEVC-DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAI 463
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
++A+ L K+++Q D TY L+ LC+ GR + A+ + ++ +
Sbjct: 464 EEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGAL 523
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
+ G CKE FD+A LLS + I D ++ +++ A+ E G YK L+E M R
Sbjct: 524 VYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQR 581
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 201/424 (47%), Gaps = 6/424 (1%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
++ G + F V ++L G+ VT L+ GL + Q + + G N
Sbjct: 177 LKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNT 236
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
++ L C R L ++E +P++V YNT++ S C+ + +AF L+
Sbjct: 237 YTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKI 296
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M ++V PD+VTY SL+ G C G+++EA + M + I PD +++NTL+ A KEG
Sbjct: 297 MYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGM 356
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
++++K +L M+ V PD FT +++G+ + A+ + + + V
Sbjct: 357 MQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDF 416
Query: 299 IIHGLC---KNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
+I LC K L+ E E + P+ TY++LI+ L + I A L ++
Sbjct: 417 LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALVLKGKLK 474
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
N+ Q D TY +L+ LC+ +A +L +M D ++PD L+ G CKE
Sbjct: 475 NQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFD 534
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL-FDEALALLSEMEDKGCIPDAITFETI 474
A+ + ++ +YN ++ +C+ G + +AL L M+ G +P+ +T + +
Sbjct: 535 KAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYL 594
Query: 475 ICAL 478
I L
Sbjct: 595 IQVL 598
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%)
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
+ +++ G K +V+E +F E+ +T + L++GL K + W++ M
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
G + +T+N L +V C + + +KM ++G +PD+VTYN L+ C+ GRLK
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A +++ + + + TY +I GLCK+G EA M D+G PD +++ T+I
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Query: 476 CALFEKGDNYKAEKLLREMMARGLL 500
A ++G +++KLL EM+ ++
Sbjct: 349 YAYCKEGMMQQSKKLLHEMLGNSVV 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 146/302 (48%), Gaps = 6/302 (1%)
Query: 52 TSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA 111
TS + + G++ A +++ +G +PD ++ TLI C +G ++++ + +++
Sbjct: 310 TSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLG 369
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
++ + +++G R G+ +++ + ++ V + + +I SLC++
Sbjct: 370 NSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFA 429
Query: 172 AFNLFSEMVVK---KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
A +L ++ + + P+ TYN+L+ ++EA L ++ +N D T+
Sbjct: 430 AKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRA 487
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
L+ L + G +EA++++A M VKPD F +L+ GYC + +KA +L+ A
Sbjct: 488 LIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEF 547
Query: 289 VTPNVHSYSIIIHGLCKNKM-VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
+ SY+ ++ +C+ +AL L M+ + +P+ +T LI L + +H
Sbjct: 548 RIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVLEQPSLPNHL 607
Query: 348 WE 349
E
Sbjct: 608 PE 609
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 273 EINKAIAILNSMAQRGVT------------PNVHSYSIIIHGLCKNKMVDEALNLFAEM- 319
EI++ + S A R +T PNV +Y +++H L +K A+ E+
Sbjct: 81 EISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELI 140
Query: 320 ---------ECIKII--------PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
+ +++ D + + L+ G K G + + + E+ + G
Sbjct: 141 ELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVS 200
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
T N LL+ L K ++ + M GI P+ T+NIL + C + + + +
Sbjct: 201 VVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLE 260
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
+ +G+ + TYN +++ C+ G EA L M + +PD +T+ ++I L + G
Sbjct: 261 KMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDG 320
Query: 483 DNYKAEKLLREMMARGL 499
+A + M+ RG+
Sbjct: 321 RVREAHQTFHRMVDRGI 337
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 212/418 (50%), Gaps = 6/418 (1%)
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
T L+ L +G A + G R + +SY TL+ + Q + ++ +VE
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
K + + +N +I++ + + DA +M ++P TYN+L+ G+ I G+ +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 207 ATELLDEMTRK---NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
++ELLD M + ++GP++ TFN LV A K+ V+EA V+ M + GV+PD TYN+
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 264 LMDGYCLVNEINKAIA-ILNSMA-QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
+ Y E +A + ++ M + PN + I++ G C+ V + L M+
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
+++ + + ++SLI+G + E++ M AD TY+++++ + +++K
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 348
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
A + K+M G++PD Y+IL G + K A+E+ + L+++ V + +I+
Sbjct: 349 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVIS 407
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G C G D+A+ + ++M G P+ TFET++ E +KAE++L+ M G+
Sbjct: 408 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 465
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 204/427 (47%), Gaps = 16/427 (3%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAF----------SVLGKILKKGYRPDAVTLTTLI 90
+A ++F L T PS+I + + +A S++ ++ + G + D++ +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV--EGHL 148
G + A+Q + G +Y TLIKG G+ S +LL + EG++
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 149 -VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ-LKE 206
V PN+ +N ++ + CK K V +A+ + +M V PD VTYN++ + G+ ++
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 207 ATELLDEMTRKNIG-PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
+E++++M K P+ T +V +EG V++ + M + V+ +L +NSL+
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
+G+ V + + +L M + V +V +YS +++ +++A +F EM +
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
PD YS L G ++ A EL++ + + +P + + +++ C + +D A+ +
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRV 421
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
KM G+ P++ T+ LM G + + A+EV Q + G T+ ++
Sbjct: 422 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRV 481
Query: 446 EGLFDEA 452
GL DE+
Sbjct: 482 AGLTDES 488
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 20/346 (5%)
Query: 38 NADDAISIFNRL--LGTSPTPSIIEFGQIPSAFSVLGK----------ILKKG---YRPD 82
N +DA+ ++ LG +PT S + + + + GK +L++G P+
Sbjct: 130 NMEDAVQALLKMKELGLNPTTST--YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPN 187
Query: 83 AVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQT-RASLQLL 141
T L++ C K +V A + + G R + V+Y T+ + G+T RA +++
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV 247
Query: 142 RQ-VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
+ V KPN ++ C++ V D M +V ++V +NSL+ GF
Sbjct: 248 EKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
V E+L M N+ DVIT++T+++A G +++A V M+K GVKPD
Sbjct: 308 VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
Y+ L GY E KA +L ++ PNV ++ +I G C N +D+A+ +F +M
Sbjct: 368 YSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 426
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
+ P+ T+ +L+ G + + A E++ M G + T+
Sbjct: 427 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ--FHDDVVARGFRLNQVS 120
++ A+ V+ K+ + G RPD VT T+ KGE RA V+ + N +
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 121 YGTLIKGLCRMGQTRASLQLLRQ-----VEGHLV-------------------------- 149
G ++ G CR G+ R L+ +R+ VE +LV
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMK 322
Query: 150 ----KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
K +V+ Y+T++++ + A +F EMV V PD Y+ L G+ + K
Sbjct: 323 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 382
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
+A ELL+ + ++ P+V+ F T++ G++ +A V M K GV P++ T+ +LM
Sbjct: 383 KAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
GY V + KA +L M GV P ++ ++ + DE+ ++C I
Sbjct: 442 WGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDI 500
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
V S + +++ L + EA +F + P I+Y++L+ + + +V
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
E+ G D +N++++ +S +++ A+ KM++ G+ P TYN L+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 413 RLKNAQEVFQDLVIKGYHVTV----RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
+ + + E+ DL+++ +V V RT+N+++ CK+ +EA ++ +ME+ G PD
Sbjct: 165 KPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 469 ITFETIICALFEKGDNYKAEKLLREMM 495
+T+ TI +KG+ +AE + E M
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKM 250
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 175/346 (50%), Gaps = 6/346 (1%)
Query: 121 YGTLIKGLCRMGQTRASLQL---LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
Y +++K L +M Q A L +R+ L++P ++ ++ +V A +
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE--LFVVLVQRFASADMVKKAIEVLD 207
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM PD + LL C G +K+A +L ++M R ++ F +L+ + G
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVG 266
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+ EAK VL M + G +PD+ Y +L+ GY ++ A +L M +RG PN + Y+
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
++I LCK ++EA+ +F EME + D +TY++L+ G CK G+I + ++D+M K
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK 386
Query: 358 GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
G + TY ++ K ++ + L +KMR PD+ YN+++ CK G +K A
Sbjct: 387 GLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
++ ++ G V T+ IMINGL +G EA EM +G
Sbjct: 447 VRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 6/352 (1%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT---YNSLLYGFCIVGQLKEAT 208
++ +Y +++ L K + + L EM +K +P ++ + L+ F +K+A
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAI 203
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
E+LDEM + PD F L+DAL K G+VK+A + M + +L + SL+ G+
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGW 262
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
C V ++ +A +L M + G P++ Y+ ++ G + +A +L +M P+
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
Y+ LI LCK R+ A ++ EM AD TY +L+ CK +DK +
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
M +G+ P +TY +M K+ + E+ + + YH + YN++I CK G
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
EA+ L +EME+ G P TF +I L +G +A +EM+ RGL
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 188/416 (45%), Gaps = 35/416 (8%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ A VL ++ K G+ PD L+ LC G V+ A + +D+ R F +N + +
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTS 257
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
L+ G CR+G+ + +L Q+ +P++V Y ++ ++DA++L +M +
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
P+ Y L+ C V +++EA ++ EM R DV+T+ LV K G + +
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
VL M+K+G+ P TY +M + + + ++ M Q P++ Y+++I
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
CK V EA+ L+ EME + P T+ +I+GL G + A + EM +G
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG----- 492
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
L V T +L++ + K+ +L+ A++V+
Sbjct: 493 -----LFSV-----------------------SQYGTLKLLLNTVLKDKKLEMAKDVWSC 524
Query: 424 LVIKGY-HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
+ KG + V ++ I I+ L +G EA + EM + +P TF ++ L
Sbjct: 525 ITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGL 580
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 20/260 (7%)
Query: 258 LFTYNSLMDGYCLVNEINKA-IAILNSMAQRG----------------VTPNVHSYSIII 300
F + + YC E+ K+ + IL+ M Q G + P + + +++
Sbjct: 133 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLV 190
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
MV +A+ + EM PD + L+D LCK G + A +L ++M + P
Sbjct: 191 QRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF-P 249
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ + SLL C+ + +A + +M + G +PD+V Y L+ G G++ +A ++
Sbjct: 250 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL 309
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+D+ +G+ Y ++I LCK +EA+ + EME C D +T+ ++ +
Sbjct: 310 LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 369
Query: 481 KGDNYKAEKLLREMMARGLL 500
G K +L +M+ +GL+
Sbjct: 370 WGKIDKCYIVLDDMIKKGLM 389
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 147/337 (43%), Gaps = 46/337 (13%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G++ A VL ++ + G+ PD V T L+ G G++ A D+ RGF N Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI+ LC++ + ++++ ++E + + +VV Y ++ CK + + + +M+
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 182 K-----------------------------------KVSPDVVTYNSLLYGFCIVGQLKE 206
K + PD+ YN ++ C +G++KE
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A L +EM + P V TF +++ L +G + EA + M+ +G LF+ +
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG----LFSVSQYGT 501
Query: 267 GYCLVNEINK------AIAILNSMAQRGVTP-NVHSYSIIIHGLCKNKMVDEALNLFAEM 319
L+N + K A + + + +G NV S++I IH L EA + EM
Sbjct: 502 LKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEM 561
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+ +P T++ L+ GL K A E+ +++ N
Sbjct: 562 IEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRN 598
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 221/491 (45%), Gaps = 61/491 (12%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV 99
+ AI +F R+ P+P+++ + I F +G+
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR------------------------SW 262
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI 159
R+ L D++ ++G + ++ + T++ R G R + + +++ +P V YN +
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
+ K + ++A ++ EM D VTYN L+ + G KEA +++ MT+K +
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
P+ IT+ T++DA GK G EA + M + G P+ TYN+++ + N+ I
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN-LFAEMECIKIIPDTITYSSLIDGL 338
+L M G +PN +++ ++ LC NK +D+ +N +F EM+ PD T+++LI
Sbjct: 443 MLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
+ G A ++ EM G A TYN+LL+ L + + M+ +G +P
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE 561
Query: 399 VTYNILMDGLCK----------EGRLKNAQ-------------------------EVFQD 423
+Y++++ K E R+K Q F
Sbjct: 562 TSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTL 621
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
GY + +N M++ + ++D+A +L + + G PD +T+ +++ +G+
Sbjct: 622 FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE 681
Query: 484 NYKAEKLLREM 494
+KAE++L+ +
Sbjct: 682 CWKAEEILKTL 692
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 207/439 (47%), Gaps = 9/439 (2%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA 102
I IF R+LG S+ A +L KI + Y D TT++ G+ +A
Sbjct: 178 IEIFVRILGRESQYSV--------AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKA 229
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQT-RASLQLLRQVEGHLVKPNVVMYNTIID 161
+ + + G V+Y ++ +MG++ R L +L ++ +K + +T++
Sbjct: 230 IDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS 289
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
+ ++ L+ +A F+E+ P VTYN+LL F G EA +L EM +
Sbjct: 290 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 349
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D +T+N LV A + G KEA V+ +M K+GV P+ TY +++D Y + ++A+ +
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
SM + G PN +Y+ ++ L K +E + + +M+ P+ T+++++
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G + EM + G D+ T+N+L+ + A + +M G V TY
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
N L++ L ++G ++ + V D+ KG+ T +Y++M+ K G + + + +++
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Query: 462 KGCIPDAITFETIICALFE 480
P + T++ A F+
Sbjct: 590 GQIFPSWMLLRTLLLANFK 608
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 201/420 (47%), Gaps = 2/420 (0%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
+ + G A V+ + KKG P+A+T TT+I G+ AL+ + G
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFN-L 175
N +Y ++ L + ++ +++L ++ + PN +NT++ +LC +K + N +
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRV 478
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F EM PD T+N+L+ + G +A+++ EMTR V T+N L++AL +
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
+G+ + +NV++ M +G KP +Y+ ++ Y I N + + + P+
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
++ K + + + F + PD + ++S++ ++ A +++ +
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
G D TYNSL+D+ + KA + K + ++PD+V+YN ++ G C+ G ++
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A + ++ +G + TYN ++G G+F E ++ M C P+ +TF+ ++
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 196/419 (46%), Gaps = 5/419 (1%)
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVV----ARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
L +L+KGL G RA+ + +V + +L+ ++ L R Q + +LL
Sbjct: 139 LVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLL 198
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
++ +V Y TI+ + + A +LF M SP +VTYN +L F +
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 202 GQ-LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
G+ ++ +LDEM K + D T +T++ A +EG ++EAK A + G +P T
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
YN+L+ + +A+++L M + + +Y+ ++ + EA + M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
++P+ ITY+++ID K+G+ A +L M G + TYN++L +L K +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
+ I + M+ G P+ T+N ++ +G K VF+++ G+ T+N +I
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ + G +A + EM G T+ ++ AL KGD E ++ +M ++G
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 155/298 (52%), Gaps = 20/298 (6%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A + G++ + G+ T L+ L KG+ R D+ ++GF+ + SY +++
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD---AFNLFSEMVVKK 183
+ G ++ +++ + P+ ++ T++ + K + ++ AF LF + K
Sbjct: 570 CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYK- 628
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
PD+V +NS+L F +A +L+ + + PD++T+N+L+D + G +A+
Sbjct: 629 --PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+L + K +KPDL +YN+++ G+C + +A+ +L+ M +RG+ P + +Y+ + G
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 304 CKNKMVDEALNLFAE----MECIK---IIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
A+ +FAE +EC+ P+ +T+ ++DG C++G+ S A + V ++
Sbjct: 747 T-------AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 143/325 (44%), Gaps = 7/325 (2%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G+ PD T TLI G A + + ++ GF +Y L+ L R G R+
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
++ ++ KP Y+ ++ K + + + ++ P + +LL
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
L + + PD++ FN+++ + +A+ +L + + G+ PD
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
L TYNSLMD Y E KA IL ++ + + P++ SY+ +I G C+ ++ EA+ + +
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
EM I P TY++ + G G + ++++ M ++ T+ ++D C++
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 378 HVDKAIALTKKMR-------DQGIQ 395
+A+ K++ DQ IQ
Sbjct: 786 KYSEAMDFVSKIKTFDPCFDDQSIQ 810
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
I + L + A L ++ + + D Y++++ ++G+ A +L + M
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 358 GQPADKFTYNSLLDVLCK-SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
G TYN +LDV K K + + +MR +G++ D T + ++ +EG L+
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 417 AQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIIC 476
A+E F +L GY TYN ++ K G++ EAL++L EME+ C D++T+ ++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 477 ALFEKGDNYKAEKLLREMMARGLL 500
A G + +A ++ M +G++
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVM 383
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 187/347 (53%), Gaps = 5/347 (1%)
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFN 174
LN +S T + L G+ S +LL + +L ++PN ++N ++ CK+ ++ AF
Sbjct: 160 LNAIS--TCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFL 217
Query: 175 LFSEMVVKKVS-PDVVTYNSLLYGFCIVGQLKEATELLDEM-TRKNIGPDVITFNTLVDA 232
+ EM +S P+ +TY++L+ + KEA EL ++M +++ I PD +TFN +++
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
+ G V+ AK +L M K G P+++ Y++LM+G+C V +I +A + + + G+ +
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLD 337
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
Y+ +++ C+N DEA+ L EM+ + DT+TY+ ++ GL GR A +++D
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
+ ++G +K +Y +L+ LC + ++KA+ M ++GI P T+N L+ LC+ G
Sbjct: 398 QWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESG 457
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
+ V + G +++ ++ +CKE LL +
Sbjct: 458 YTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 192/385 (49%), Gaps = 10/385 (2%)
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
F+ +GF N +Y L+ L R + A +L Q++ + ++ ++
Sbjct: 76 FNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFS 135
Query: 165 KDKL---VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG- 220
+ L V + FNL V+ +V P + ++ L G++ + +LL + N+G
Sbjct: 136 RSDLHDKVMEMFNLIQ--VIARVKPSLNAISTCLNLLIDSGEVNLSRKLL-LYAKHNLGL 192
Query: 221 -PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK-PDLFTYNSLMDGYCLVNEINKAI 278
P+ FN LV K G++ A V+ M + G+ P+ TY++LMD + +A+
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 279 AILNSM-AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG 337
+ M ++ G++P+ +++++I+G C+ V+ A + M+ P+ YS+L++G
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 338 LCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPD 397
CK G+I A + DE+ G D Y +L++ C++ D+A+ L +M+ + D
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 398 VVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLS 457
+TYN+++ GL EGR + A ++ +G H+ +Y I++N LC G ++A+ LS
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 458 EMEDKGCIPDAITFETIICALFEKG 482
M ++G P T+ ++ L E G
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESG 457
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 154/294 (52%), Gaps = 2/294 (0%)
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG-PDVITFNTLVDALGKEGNVKEA 242
+ P+ +N L+ C G + A +++EM R I P+ IT++TL+D L KEA
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 243 KNVLAVMM-KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+ M+ K+G+ PD T+N +++G+C E+ +A IL+ M + G PNV++YS +++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
G CK + EA F E++ + DT+ Y++L++ C++G A +L+ EM A
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D TYN +L L ++A+ + + +G+ + +Y I+++ LC G L+ A +
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ +G T+N ++ LC+ G + + +L G IP ++ ++
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 161/315 (51%), Gaps = 10/315 (3%)
Query: 50 LGTSPTPSIIEF--------GQIPSAFSVLGKILKKGYR-PDAVTLTTLIKGLCLKGEVR 100
LG P I G I AF V+ ++ + G P+++T +TL+ L +
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 101 RALQFHDDVVAR-GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI 159
A++ +D++++ G + V++ +I G CR G+ + ++L ++ + PNV Y+ +
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
++ CK + +A F E+ + D V Y +L+ FC G+ EA +LL EM
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
D +T+N ++ L EG +EA +L +GV + +Y +++ C E+ KA+
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
L+ M++RG+ P+ +++ ++ LC++ + + + I +IP ++ ++++ +C
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Query: 340 KSGRISHAWELVDEM 354
K ++ H +EL+D +
Sbjct: 490 KERKLVHVFELLDSL 504
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 200/433 (46%), Gaps = 38/433 (8%)
Query: 80 RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQ 139
+P+ T +I L +G + + L+ D++ ++G + SY LI R G+ SL+
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF-NLFSEMVVKKVSPDVVTYNSLLYGF 198
LL +++ + P+++ YNT+I++ + L + LF+EM + + PD+VTYN+LL
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
I G EA + M I PD+ T++ LV+ GK +++ ++L M G PD+
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
+YN L++ Y I +A+ + + M G TPN ++YS++++ ++ D+ LF E
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM------------------------ 354
M+ PD TY+ LI+ + G L +M
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 355 HNKGQ------------PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
H + P+ K Y +++ ++ ++A+ M + G P + T++
Sbjct: 438 HEDARKILQYMTANDIVPSSK-AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
L+ + G +K ++ + LV G T+N I + G F+EA+ +ME
Sbjct: 497 SLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556
Query: 463 GCIPDAITFETII 475
C PD T E ++
Sbjct: 557 RCDPDERTLEAVL 569
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 233/527 (44%), Gaps = 61/527 (11%)
Query: 25 PSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFG-QIPSAFS----------VLG- 72
P+ +SH LS I N+ I NR + G + P +FS VLG
Sbjct: 6 PNPNSHHLSFLIQNSS---FIGNRRFADGNRLRFLSGGNRKPCSFSGKIKAKTKDLVLGN 62
Query: 73 ---KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
+ K Y D +L + L +G + R L D+ LN + + K
Sbjct: 63 PSVSVEKGKYSYDVESLINKLSSLPPRGSIARCL----DIFKNKLSLND--FALVFKEFA 116
Query: 130 RMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV 188
G + SL+L + ++ + KPN +Y +I L ++ L+ +F EM + VS V
Sbjct: 117 GRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSV 176
Query: 189 VTYNSLLYGFCIVGQLKEATELLD------------------------------------ 212
+Y +L+ + G+ + + ELLD
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
EM + I PD++T+NTL+ A G EA+ V M G+ PDL TY+ L++ + +
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
+ K +L MA G P++ SY++++ K+ + EA+ +F +M+ P+ TYS
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
L++ +SGR +L EM + D TYN L++V + + + + L M ++
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
I+PD+ TY ++ K G ++A+++ Q + + + Y +I + L++EA
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
L + M + G P TF +++ + G ++E +L ++ G+
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/493 (19%), Positives = 213/493 (43%), Gaps = 19/493 (3%)
Query: 21 VVSKPSFHSHSLSPSIHNA----DDAISIFNRLLGTSPTPSIIEF----------GQIPS 66
+ KP+ H +++ S+ D + +F+ + + S+ + G+ +
Sbjct: 135 IWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYET 194
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKG--EVRRALQFHDDVVARGFRLNQVSYGTL 124
+ +L ++ + P +T T+I C +G + L ++ G + + V+Y TL
Sbjct: 195 SLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 253
Query: 125 IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV 184
+ G + + R + + P++ Y+ ++++ K + + +L EM
Sbjct: 254 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKN 244
PD+ +YN LL + G +KEA + +M P+ T++ L++ G+ G + +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 245 VLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC 304
+ M PD TYN L++ + + + + + M + + P++ +Y II
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Query: 305 KNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
K + ++A + M I+P + Y+ +I+ ++ A + MH G
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE 493
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
T++SLL + V ++ A+ ++ D GI + T+N ++ + G+ + A + + D+
Sbjct: 494 TFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM 553
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDN 484
RT +++ L DE EM+ +P + + ++ A++ K +
Sbjct: 554 EKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCY-CMMLAVYGKTER 612
Query: 485 Y-KAEKLLREMMA 496
+ +LL EM++
Sbjct: 613 WDDVNELLEEMLS 625
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 209/478 (43%), Gaps = 29/478 (6%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLG----------KILKKGYRPDAVTLTTLIKG 92
+ +F + P I+ + + SA ++ G + G PD T + L++
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 93 LCLKGEVRRALQFHD---DVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
G++RR + D ++ + G + SY L++ + G + ++ + Q++
Sbjct: 292 F---GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
PN Y+ +++ + D LF EM PD TYN L+ F G KE
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L +M +NI PD+ T+ ++ A GK G ++A+ +L M + P Y +++ +
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+A+ N+M + G P++ ++ +++ + +V E+ + + + I +
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRD 528
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
T+++ I+ + G+ A + +M D+ T ++L V + VD+ ++M
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM 588
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI-MINGLCKEGL 448
+ I P ++ Y +++ K R + E+ ++++ + R NI + G +G
Sbjct: 589 KASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML------SNRVSNIHQVIGQMIKGD 642
Query: 449 FDE------ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+D+ +L ++ +GC + ++ AL+ G +A ++L E RGL
Sbjct: 643 YDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLF 700
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/480 (19%), Positives = 185/480 (38%), Gaps = 91/480 (18%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEFGQIPSAFS----------VLGKILKKGYRPDAVTLTT 88
D+A +F + P + + + F +LG++ G PD +
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
L++ G ++ A+ + A G N +Y L+ + G+ QL +++
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE-A 207
P+ YN +I+ + + LF +MV + + PD+ TY +++ C G L E A
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CGKGGLHEDA 441
Query: 208 TELLDEMTRKNI-----------------------------------GPDVITFNTLVDA 232
++L MT +I P + TF++L+ +
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
+ G VKE++ +L+ ++ G+ + T+N+ ++ Y + +A+ M + P+
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ ++ ++VDE F EM+ I+P + Y ++ K+ R EL++
Sbjct: 562 ERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLE 621
Query: 353 EM--------HN------KGQPADKFT----------------------YNSLLDVLCKS 376
EM H KG D YN+LLD L
Sbjct: 622 EMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWL 681
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGL----CKEGRLKNAQEVF----QDLVIKG 428
++A + + +G+ P++ N L+ + EG + A V+ D+++KG
Sbjct: 682 GQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKG 741
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 164/309 (53%), Gaps = 8/309 (2%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++ + + G+ +++L + H ++ +NTI+D LCK K V A+ LF +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ S D VTYN +L G+C++ + +A E+L EM + I P++ T+NT++ + G +
Sbjct: 188 R-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+ A M K+ + D+ TY +++ G+ + EI +A + + M + GV P+V +Y+ +
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I LCK V+ A+ +F EM P+ TY+ LI GL +G S EL+ M N+G
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
+ TYN ++ + V+KA+ L +KM P++ TYNIL+ G+ R
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRS----- 421
Query: 420 VFQDLVIKG 428
+D+V+ G
Sbjct: 422 --EDMVVAG 428
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 165/324 (50%), Gaps = 1/324 (0%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
++ ID + L ++L M ++ P T+ + + G+ +A +L M
Sbjct: 94 FDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMH 153
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
D+ +FNT++D L K V++A + + + D TYN +++G+CL+
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTP 212
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
KA+ +L M +RG+ PN+ +Y+ ++ G + + A F EM+ D +TY++++
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
G +G I A + DEM +G TYN+++ VLCK +V+ A+ + ++M +G +
Sbjct: 273 HGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE 332
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
P+V TYN+L+ GL G +E+ Q + +G +TYN+MI + ++AL L
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 456 LSEMEDKGCIPDAITFETIICALF 479
+M C+P+ T+ +I +F
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGMF 416
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 160/317 (50%), Gaps = 11/317 (3%)
Query: 32 LSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGK----------ILKKGYRP 81
++ +H S+ +R+ PS F + ++ GK + + G
Sbjct: 100 IAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQ 159
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D + T++ LC V +A + + R F ++ V+Y ++ G C + +T +L++L
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVL 218
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+++ + PN+ YNT++ + + A+ F EM + DVVTY ++++GF +
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
G++K A + DEM R+ + P V T+N ++ L K+ NV+ A + M+++G +P++ TY
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N L+ G E ++ ++ M G PN +Y+++I + V++AL LF +M
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 322 IKIIPDTITYSSLIDGL 338
+P+ TY+ LI G+
Sbjct: 399 GDCLPNLDTYNILISGM 415
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 145/285 (50%), Gaps = 1/285 (0%)
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L+ M IGP TF + + G +A + M + G DL ++N+++D C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ KA + ++ R V +Y++I++G C K +AL + EM I P+
Sbjct: 173 KSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY++++ G ++G+I HAWE EM + D TY +++ + + +A + +M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+G+ P V TYN ++ LCK+ ++NA +F+++V +GY V TYN++I GL G F
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
L+ ME++GC P+ T+ +I E + KA L +M
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%)
Query: 71 LGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCR 130
L + L+ + D VT ++ G CL +AL+ ++V RG N +Y T++KG R
Sbjct: 183 LFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 131 MGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT 190
GQ R + + +++ + +VV Y T++ + A N+F EM+ + V P V T
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
YN+++ C ++ A + +EM R+ P+V T+N L+ L G + ++ M
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRME 362
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+G +P+ TYN ++ Y +E+ KA+ + M PN+ +Y+I+I G+ K +
Sbjct: 363 NEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSE 422
Query: 311 E 311
+
Sbjct: 423 D 423
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
LD R+ + D +F+ +D + +++ M + P T+ + + Y
Sbjct: 79 FLDNHHREYVH-DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYA 137
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ +KA+ + +M + G ++ S++ I+ LCK+K V++A LF + + DT+
Sbjct: 138 SAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG-RFSVDTV 196
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+ +++G C R A E++ EM +G + TYN++L ++ + A +M
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ + + DVVTY ++ G G +K A+ VF +++ +G +V TYN MI LCK+
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
+ A+ + EM +G P+ T+ +I LF G+ + E+L++ M G
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
R + S+ + I + + +L M ++I P T++ + + +G+
Sbjct: 84 HREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPD 143
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
A +L MH G D ++N++LDVLCKS V+KA L + +R + D VTYN+++
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVIL 202
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
+G C R A EV +++V +G + + TYN M+ G + G A EM+ + C
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
D +T+ T++ G+ +A + EM+ G+L
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+I A +V +++++G P T +I+ LC K V A+ +++V RG+ N +Y
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI+GL G+ +L++++E +PN YN +I + V A LF +M
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 182 KKVSPDVVTYNSLLYGFCI 200
P++ TYN L+ G +
Sbjct: 399 GDCLPNLDTYNILISGMFV 417
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 197/449 (43%), Gaps = 35/449 (7%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
++++ + A+ ++ G +PD T LI G+C KG V A++ + G R
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
N +Y LI G G+ +L+ L + + PN T + + + AF +
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVL 308
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
+ K + V Y+++LY KE + L ++ + PD TFN + L K
Sbjct: 309 VGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKG 368
Query: 237 GNVKEAKNVLAVMMKQGVKP-----------------------------------DLFTY 261
++ E + + +GVKP +++Y
Sbjct: 369 HDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSY 428
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N+++D C I A L M RG++PN+ +++ + G V + + ++
Sbjct: 429 NAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLV 488
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
PD IT+S +I+ LC++ I A++ EM G ++ TYN L+ C + D+
Sbjct: 489 HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDR 548
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
++ L KM++ G+ PD+ YN + CK ++K A+E+ + ++ G TY+ +I
Sbjct: 549 SVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK 608
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAIT 470
L + G EA + S +E GC+PD+ T
Sbjct: 609 ALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 201/456 (44%), Gaps = 35/456 (7%)
Query: 79 YRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASL 138
Y D + L L KG + +++ ++ G+R++ LI R+G +
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCN 165
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+ Q+ +KP+ +YN +ID+L K + A+ F +M PD TYN L++G
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
C G + EA L+ +M ++ P+V T+ L+D G V EA L +M + + P+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 259 FTYNSLMDG---------------------------------YCLVNE--INKAIAILNS 283
T + + G YCL N + L
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
+ +RG P+ +++ + L K + E +F + P Y L+ L + R
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR 405
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
S + +M G + ++YN+++D LCK+ ++ A +M+D+GI P++VT+N
Sbjct: 406 FSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNT 465
Query: 404 LMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
+ G G +K V + L++ G+ V T++++IN LC+ +A EM + G
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 464 CIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
P+ IT+ +I + GD ++ KL +M GL
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 203/430 (47%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
V +I G +P +I L + A + + G + ++ +Y LI G+C
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ G +++L++Q+E +PNV Y +ID V +A M V+K++P+
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
T + ++G +A E+L K+ + ++ ++ L KE L +
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI 346
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
++G PD T+N+ M +++ + I + RGV P + Y +++ L +
Sbjct: 347 GERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRF 406
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
E +M ++ +Y+++ID LCK+ RI +A + EM ++G + T+N+
Sbjct: 407 SEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTF 466
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
L V K + +K+ G +PDV+T++++++ LC+ +K+A + F++++ G
Sbjct: 467 LSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEK 489
TYNI+I C G D ++ L ++M++ G PD + I + + KAE+
Sbjct: 527 EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEE 586
Query: 490 LLREMMARGL 499
LL+ M+ GL
Sbjct: 587 LLKTMLRIGL 596
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 53/273 (19%)
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
YC N++ I+ L G+ P+ Y+ +I L K+ +D A F +M PD
Sbjct: 163 YC--NDVFAQISFL------GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPD 214
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
TY+ LI G+CK G + A LV +M +G + FTY L+D + VD+A+ +
Sbjct: 215 RFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
MR + + P+ T + G+ + A EV + K ++ Y+ ++ L
Sbjct: 275 MMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNS 334
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICAL----------------------------- 478
+ E L ++ ++G IPD+ TF + L
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394
Query: 479 -----------FEKGDNYKAEKLLREMMARGLL 500
F +GD Y L++M GLL
Sbjct: 395 VLVQALLNAQRFSEGDRY-----LKQMGVDGLL 422
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 215/443 (48%), Gaps = 31/443 (6%)
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
T L+ L +G A + G R + +SY TL+ + Q + ++ +VE
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
K + + +N +I++ + + DA +M ++P TYN+L+ G+ I G+ +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 207 ATELLDEMTRK---NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
++ELLD M + ++GP++ TFN LV A K+ V+EA V+ M + GV+PD TYN+
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 264 LMDGYCLVNEINKAIA-ILNSMAQR-GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
+ Y E +A + ++ M + PN + I++ G C+ V + L M+
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 322 IKIIPDTITYSSLIDGLC----KSG-----------RISHAWELVDEMHNKGQ------- 359
+++ + + ++SLI+G + G + ELV K Q
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKE 348
Query: 360 ---PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
AD TY+++++ + +++KA + K+M G++PD Y+IL G + K
Sbjct: 349 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 408
Query: 417 AQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIIC 476
A+E+ + L+++ V + +I+G C G D+A+ + ++M G P+ TFET++
Sbjct: 409 AEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMW 467
Query: 477 ALFEKGDNYKAEKLLREMMARGL 499
E +KAE++L+ M G+
Sbjct: 468 GYLEVKQPWKAEEVLQMMRGCGV 490
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 204/452 (45%), Gaps = 41/452 (9%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAF----------SVLGKILKKGYRPDAVTLTTLI 90
+A ++F L T PS+I + + +A S++ ++ + G + D++ +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV--EGHL 148
G + A+Q + G +Y TLIKG G+ S +LL + EG++
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 149 -VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ-LKE 206
V PN+ +N ++ + CK K V +A+ + +M V PD VTYN++ + G+ ++
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 207 ATELLDEMTRKNIG-PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
+E++++M K P+ T +V +EG V++ + M + V+ +L +NSL+
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 266 DGYC-------------------------LVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
+G+ LV + +L M + V +V +YS ++
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
+ +++A +F EM + PD YS L G ++ A EL++ + + +P
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP 422
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ + +++ C + +D A+ + KM G+ P++ T+ LM G + + A+EV
Sbjct: 423 -NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
Q + G T+ ++ GL DE+
Sbjct: 482 LQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 513
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 124/276 (44%), Gaps = 26/276 (9%)
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM-- 131
++K+ +P+ T ++ G C +G VR L+F + N V + +LI G +
Sbjct: 251 VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Query: 132 -----------------------GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
G + +Q+L ++ VK +V+ Y+T++++
Sbjct: 311 RDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGY 370
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
+ A +F EMV V PD Y+ L G+ + K+A ELL+ + ++ P+V+ F T
Sbjct: 371 MEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTT 429
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
++ G++ +A V M K GV P++ T+ +LM GY V + KA +L M G
Sbjct: 430 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 489
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
V P ++ ++ + DE+ ++C I
Sbjct: 490 VKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDI 525
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
V S + +++ L + EA +F + P I+Y++L+ + + +V
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
E+ G D +N++++ +S +++ A+ KM++ G+ P TYN L+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 413 RLKNAQEVFQDLVIKGYHVTV----RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
+ + + E+ DL+++ +V V RT+N+++ CK+ +EA ++ +ME+ G PD
Sbjct: 165 KPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 469 ITFETIICALFEKGDNYKAEKLLREMM 495
+T+ TI +KG+ +AE + E M
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKM 250
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 215/467 (46%), Gaps = 15/467 (3%)
Query: 34 PSIH-NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKG-YRPDAVTLTTLIK 91
PS H + DD I++ +L SII V IL+K ++PD + LI
Sbjct: 135 PSTHASWDDLINVSVQLRLNKKWDSII---------LVCEWILRKSSFQPDVICFNLLID 185
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
K + + A + ++ + + +Y LIK C G + +L +++ H V P
Sbjct: 186 AYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSP 245
Query: 152 N---VVMYNTIIDSLCKDKL-VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
V +YN I+ L K K +A ++F M + P TYN ++ + + +
Sbjct: 246 KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMS 305
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+L EM P++ T+ LV+A +EG ++A+ + + + G++PD++ YN+LM+
Sbjct: 306 WKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 365
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
Y A I + M G P+ SY+I++ + + +A +F EM+ + I P
Sbjct: 366 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
++ L+ K+ ++ +V EM G D F NS+L++ + K +
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 485
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
+M + D+ TYNIL++ K G L+ +E+F +L K + V T+ I ++
Sbjct: 486 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 545
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
L+ + L + EM D GC PD T + ++ A + + +LR M
Sbjct: 546 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 148/290 (51%), Gaps = 4/290 (1%)
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
+ + + PDVI FN L+DA G++ KEA+++ +++ P TY L+ YC+
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 274 INKAIAILNSMAQRGVTPN---VHSYSIIIHGLCKNK-MVDEALNLFAEMECIKIIPDTI 329
I +A +L M V+P V Y+ I GL K K +EA+++F M+ + P T
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+ +I+ K+ + +W+L EM + + TY +L++ + +KA + +++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
++ G++PDV YN LM+ + G A E+F + G +YNIM++ + GL
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+A A+ EM+ G P + ++ A + D K E +++EM G+
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 140/328 (42%), Gaps = 10/328 (3%)
Query: 38 NADDAISIFNRLLGTSPTPS-------IIEFGQIPSAF---SVLGKILKKGYRPDAVTLT 87
N ++AI +F R+ P+ I +G+ ++ + ++ +P+ T T
Sbjct: 266 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 325
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
L+ +G +A + + + G + Y L++ R G + ++ ++
Sbjct: 326 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 385
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
+P+ YN ++D+ + L SDA +F EM ++P + ++ LL + + +
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
++ EM+ + PD N++++ G+ G + + +LA M D+ TYN L++
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
Y + + + + ++ P+V +++ I + K+ + L +F EM PD
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 565
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMH 355
T L+ ++ ++ MH
Sbjct: 566 GGTAKVLLSACSSEEQVEQVTSVLRTMH 593
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
R+GQ ++L ++E ++ YN +I+ K + LF E+ K PDVV
Sbjct: 473 RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 532
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
T+ S + + + E+ +EM PD T L+ A E V++ +VL M
Sbjct: 533 TWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Query: 250 MK 251
K
Sbjct: 593 HK 594
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 207/440 (47%), Gaps = 21/440 (4%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G+ D TLT +++ C G+ RAL +++++RG+ +S L+ C+ GQ +
Sbjct: 209 GFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKA 267
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+L+ +E ++ N Y +I K+ + AF LF +M ++ D+ Y+ L+ G
Sbjct: 268 FELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGG 327
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
C L+ A L E+ R I PD L+ + +E + V+ + + K
Sbjct: 328 LCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDK--KSV 385
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMA------------------QRGVTPNVHSYSII 299
+ Y SL +G+ + +++A + + ++ + + P+ S SI+
Sbjct: 386 MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIV 445
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I+ L K VD A+ L ++ +IP + Y+++I+G+CK GR + +L+ EM + G
Sbjct: 446 INCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGV 505
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
+FT N + L + A+ L KKMR G +P + L+ LC+ GR +A +
Sbjct: 506 EPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACK 565
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
D+ +G+ + I+GL K D L L ++ G PD I + +I AL
Sbjct: 566 YLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALC 625
Query: 480 EKGDNYKAEKLLREMMARGL 499
+ +A+ L EM+++GL
Sbjct: 626 KACRTMEADILFNEMVSKGL 645
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 207/487 (42%), Gaps = 51/487 (10%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF-------- 114
+I AF + K+ + G D LI GLC ++ AL + ++ G
Sbjct: 298 RIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILG 357
Query: 115 -------------RLNQVS------------YGTLIKGLCRMGQTRASLQLLRQVEGH-- 147
R+ +V Y +L +G R + ++ + G+
Sbjct: 358 KLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYE 417
Query: 148 ------LVK----------PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
+VK P+ + +I+ L K V A L ++V + P + Y
Sbjct: 418 SDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMY 477
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
N+++ G C G+ +E+ +LL EM + P T N + L + + A ++L M
Sbjct: 478 NNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF 537
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
G +P + L+ C A L+ +A G ++ + + I GL KN+ VD
Sbjct: 538 YGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDR 597
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
L LF ++ PD I Y LI LCK+ R A L +EM +KG TYNS++D
Sbjct: 598 GLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMID 657
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
CK +D+ ++ +M + PDV+TY L+ GLC GR A + ++ K +
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
T+ +I GLCK G EAL EME+K PD+ + +++ + + +
Sbjct: 718 NRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIF 777
Query: 492 REMMARG 498
REM+ +G
Sbjct: 778 REMVHKG 784
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 180/403 (44%), Gaps = 48/403 (11%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILK---KGYRPDAVTLTTLIKGLCLKG 97
+A S L+G + + E + K+LK K PD+ +L+ +I L
Sbjct: 404 EAYSFIQNLMGNYESDGVSE----------IVKLLKDHNKAILPDSDSLSIVINCLVKAN 453
Query: 98 EVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYN 157
+V A+ D+V G + Y +I+G+C+ G++ SL+LL +++ V+P+ N
Sbjct: 454 KVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN 513
Query: 158 TIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR- 216
I L + A +L +M P + L+ C G+ +A + LD++
Sbjct: 514 CIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGE 573
Query: 217 -----------------KNIG-----------------PDVITFNTLVDALGKEGNVKEA 242
KN G PDVI ++ L+ AL K EA
Sbjct: 574 GFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEA 633
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ M+ +G+KP + TYNS++DG+C EI++ ++ + M + P+V +Y+ +IHG
Sbjct: 634 DILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHG 693
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
LC + EA+ + EM+ P+ IT+ +LI GLCK G A EM K D
Sbjct: 694 LCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPD 753
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
Y SL+ S +++ + ++M +G P V N ++
Sbjct: 754 SAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 143/319 (44%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+ + +LG++ G P TL + L + + AL + GF
Sbjct: 488 GRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT 547
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
L+K LC G+ + + L V G ++V ID L K++ V LF ++
Sbjct: 548 TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICA 607
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
PDV+ Y+ L+ C + EA L +EM K + P V T+N+++D KEG +
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+ + M + PD+ TY SL+ G C ++AI N M + PN ++ +I
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
GLCK EAL F EME ++ PD+ Y SL+ S I+ + + EM +KG+
Sbjct: 728 GLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Query: 362 DKFTYNSLLDVLCKSHHVD 380
N +L V S V+
Sbjct: 788 VSVDRNYMLAVNVTSKFVE 806
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 152/356 (42%), Gaps = 12/356 (3%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
S +I L + + ++ LL + + + P +MYN II+ +CK+ ++ L EM
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKE------ATELLDEMTRKNIGPDVITFNTLVDAL 233
V P T N CI G L E A +LL +M P + LV L
Sbjct: 501 KDAGVEPSQFTLN------CIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKL 554
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
+ G +A L + +G + + +DG +++ + + + G P+V
Sbjct: 555 CENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDV 614
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+Y ++I LCK EA LF EM + P TY+S+IDG CK G I +
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M+ + D TY SL+ LC S +AI +M+ + P+ +T+ L+ GLCK G
Sbjct: 675 MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
A F+++ K Y +++ + + EM KG P ++
Sbjct: 735 SGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 199/481 (41%), Gaps = 59/481 (12%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQT- 134
++GYR D + L + DV+ ++ ++G I+ L G
Sbjct: 99 QEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVD 158
Query: 135 RASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL----FSEMVVKKVSPDVVT 190
AS R E L PN YN +++++ K S + L EM D T
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSN--SSSVELVEARLKEMRDCGFHFDKFT 216
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
+L +C G+ + A + +E+ + + I+ LV + K G V +A ++ ++
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLE 275
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
++ ++ + TY L+ G+ + I+KA + M + G+ ++ Y ++I GLCK+K ++
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLE 335
Query: 311 EALNLFAEMECIKIIPD---------------------------------TITYSSLIDG 337
AL+L+ E++ I PD + Y SL +G
Sbjct: 336 MALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEG 395
Query: 338 LCKSGRISHAWELVDEM------------------HNKGQPADKFTYNSLLDVLCKSHHV 379
++ + A+ + + HNK D + + +++ L K++ V
Sbjct: 396 FIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKV 455
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
D A+ L + G+ P + YN +++G+CKEGR + + ++ ++ G + T N +
Sbjct: 456 DMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
L + F AL LL +M G P ++ L E G A K L ++ G
Sbjct: 516 YGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF 575
Query: 500 L 500
L
Sbjct: 576 L 576
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 215/467 (46%), Gaps = 15/467 (3%)
Query: 34 PSIHNA-DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKG-YRPDAVTLTTLIK 91
PS H + DD I++ +L SII V IL+K ++PD + LI
Sbjct: 113 PSTHASWDDLINVSVQLRLNKKWDSII---------LVCEWILRKSSFQPDVICFNLLID 163
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
K + + A + ++ + + +Y LIK C G + +L +++ H V P
Sbjct: 164 AYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSP 223
Query: 152 ---NVVMYNTIIDSLCKDKL-VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
V +YN I+ L K K +A ++F M + P TYN ++ + + +
Sbjct: 224 KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMS 283
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+L EM P++ T+ LV+A +EG ++A+ + + + G++PD++ YN+LM+
Sbjct: 284 WKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 343
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
Y A I + M G P+ SY+I++ + + +A +F EM+ + I P
Sbjct: 344 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
++ L+ K+ ++ +V EM G D F NS+L++ + K +
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 463
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
+M + D+ TYNIL++ K G L+ +E+F +L K + V T+ I ++
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 523
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
L+ + L + EM D GC PD T + ++ A + + +LR M
Sbjct: 524 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 148/290 (51%), Gaps = 4/290 (1%)
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
+ + + PDVI FN L+DA G++ KEA+++ +++ P TY L+ YC+
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 274 INKAIAILNSMAQRGVTP---NVHSYSIIIHGLCKNK-MVDEALNLFAEMECIKIIPDTI 329
I +A +L M V+P V Y+ I GL K K +EA+++F M+ + P T
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+ +I+ K+ + +W+L EM + + TY +L++ + +KA + +++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
++ G++PDV YN LM+ + G A E+F + G +YNIM++ + GL
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+A A+ EM+ G P + ++ A + D K E +++EM G+
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 140/328 (42%), Gaps = 10/328 (3%)
Query: 38 NADDAISIFNRLLGTSPTPS-------IIEFGQIPSAF---SVLGKILKKGYRPDAVTLT 87
N ++AI +F R+ P+ I +G+ ++ + ++ +P+ T T
Sbjct: 244 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 303
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
L+ +G +A + + + G + Y L++ R G + ++ ++
Sbjct: 304 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
+P+ YN ++D+ + L SDA +F EM ++P + ++ LL + + +
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
++ EM+ + PD N++++ G+ G + + +LA M D+ TYN L++
Sbjct: 424 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
Y + + + + ++ P+V +++ I + K+ + L +F EM PD
Sbjct: 484 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 543
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMH 355
T L+ ++ ++ MH
Sbjct: 544 GGTAKVLLSACSSEEQVEQVTSVLRTMH 571
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
R+GQ ++L ++E ++ YN +I+ K + LF E+ K PDVV
Sbjct: 451 RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 510
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
T+ S + + + E+ +EM PD T L+ A E V++ +VL M
Sbjct: 511 TWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Query: 250 MK 251
K
Sbjct: 571 HK 572
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 184/352 (52%), Gaps = 3/352 (0%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y +I+ ++ Q + L+ + + NV + ++ + + V +A F+ M
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVM 194
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ P++V +N LL C +++A E+ + M R PD T++ L++ GKE N+
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNL 253
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+A+ V M+ G PD+ TY+ ++D C +++A+ I+ SM P YS++
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
+H ++EA++ F EME + D ++SLI CK+ R+ + + ++ EM +KG
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
+ + N +L L + D+A + +KM + +PD TY +++ C++ ++ A +
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADK 432
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
V++ + KG ++ T++++INGLC+E +A LL EM + G P +TF
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 172/348 (49%), Gaps = 3/348 (0%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+V Y+ +I+S K + ++L + M KK+ +V T+ ++ + ++ EA
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+ M + ++ P+++ FN L+ AL K NV++A+ V M+ PD TY+ L++G+
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFE-NMRDRFTPDSKTYSILLEGWGKE 250
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ KA + M G P++ +YSI++ LCK VDEAL + M+ P T Y
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
S L+ R+ A + EM G AD +NSL+ CK++ + + K+M+
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+G+ P+ + NI++ L + G A +VF+ + IK TY ++I C++ +
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMET 429
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
A + M KG P TF +I L E+ KA LL EM+ G+
Sbjct: 430 ADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 39/334 (11%)
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
LN ++ +++ R + ++ +E + + PN+V +N ++ +LCK K V A +
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 225
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F M + +PD TY+ LL G+ L +A E+ EM PD++T++ +VD L K
Sbjct: 226 FENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 236 EGNVKEAKNVL------------------------------AV-----MMKQGVKPDLFT 260
G V EA ++ AV M + G+K D+
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
+NSL+ +C N + +L M +GVTPN S +II+ L + DEA ++F +M
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM- 403
Query: 321 CIKII-PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
IK+ PD TY+ +I C+ + A ++ M KG T++ L++ LC+
Sbjct: 404 -IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 462
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
KA L ++M + GI+P VT+ L L KE R
Sbjct: 463 QKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 156/316 (49%), Gaps = 10/316 (3%)
Query: 37 HNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI---------LKKGYRPDAVTLT 87
D+AI FN + P+++ F + SA + ++ + PD+ T +
Sbjct: 182 QKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYS 241
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
L++G + + +A + +++ G + V+Y ++ LC+ G+ +L ++R ++
Sbjct: 242 ILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPS 301
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
+ KP +Y+ ++ + + + +A + F EM + DV +NSL+ FC ++K
Sbjct: 302 ICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNV 361
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+L EM K + P+ + N ++ L + G EA +V M+K +PD TY ++
Sbjct: 362 YRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKM 420
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
+C E+ A + M ++GV P++H++S++I+GLC+ + +A L EM + I P
Sbjct: 421 FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPS 480
Query: 328 TITYSSLIDGLCKSGR 343
+T+ L L K R
Sbjct: 481 GVTFGRLRQLLIKEER 496
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 194/400 (48%), Gaps = 7/400 (1%)
Query: 104 QFHDDVV-ARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE-GHLVKPNVVMYNTIID 161
QF D++ AR ++ Y ++K + + RA L++ + H PN M I+
Sbjct: 141 QFVADILDARLVQMTPTDYCFVVKSVGQESWQRA-LEVFEWLNLRHWHSPNARMVAAILG 199
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
L + S A +F+ V V YN+++ + G+ +A EL+D M ++ P
Sbjct: 200 VLGRWNQESLAVEIFTR-AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVP 258
Query: 222 DVITFNTLVDALGKEGNVKE--AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
D+I+FNTL++A K G + A +L ++ G++PD TYN+L+ + ++ A+
Sbjct: 259 DLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVK 318
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+ M P++ +Y+ +I + + EA LF E+E PD +TY+SL+
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFA 378
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD-QGIQPDV 398
+ E+ +M G D+ TYN+++ + K +D A+ L K M+ G PD
Sbjct: 379 RERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDA 438
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
+TY +L+D L K R A + +++ G T++TY+ +I G K G +EA S
Sbjct: 439 ITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSC 498
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
M G PD + + ++ L + KA L R+M++ G
Sbjct: 499 MLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 165/333 (49%), Gaps = 7/333 (2%)
Query: 97 GEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASL--QLLRQVEGHLVKPNVV 154
G+ +A + D + RG + +S+ TLI + G +L +LL V ++P+ +
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL--YGFCIVGQLKEATELLD 212
YNT++ + +D + A +F +M + PD+ TYN+++ YG C G EA L
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC--GLAAEAERLFM 356
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
E+ K PD +T+N+L+ A +E N ++ K V M K G D TYN+++ Y
Sbjct: 357 ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG 416
Query: 273 EINKAIAILNSM-AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+++ A+ + M G P+ +Y+++I L K EA L +EM + I P TY
Sbjct: 417 QLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
S+LI G K+G+ A + M G D Y+ +LDVL + + KA L + M
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
G P Y +++ GL KE R + Q+ +D+
Sbjct: 537 DGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 192/399 (48%), Gaps = 5/399 (1%)
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKG-LCRMGQTRASLQLLRQVEGHLVKPNVVMYNT 158
+RAL+ + + R + I G L R Q ++++ + E V V +YN
Sbjct: 172 QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAE-PTVGDRVQVYNA 230
Query: 159 IIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE--ATELLDEMTR 216
++ + S A L M + PD++++N+L+ G L A ELLD +
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
+ PD IT+NTL+ A ++ N+ A V M +PDL+TYN+++ Y +
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAE 350
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
A + + +G P+ +Y+ +++ + + ++ ++ +M+ + D +TY+++I
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 337 GLCKSGRISHAWELVDEMHN-KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
K G++ A +L +M G+ D TY L+D L K++ +A AL +M D GI+
Sbjct: 411 MYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIK 470
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
P + TY+ L+ G K G+ + A++ F ++ G Y++M++ L + +A L
Sbjct: 471 PTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGL 530
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+M G P +E +I L ++ + +K +R+M
Sbjct: 531 YRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 172/414 (41%), Gaps = 48/414 (11%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A +L + G RPDA+T Y TL+
Sbjct: 281 AVELLDMVRNSGLRPDAIT-----------------------------------YNTLLS 305
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
R ++++ +E H +P++ YN +I + L ++A LF E+ +K P
Sbjct: 306 ACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP 365
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D VTYNSLLY F ++ E+ +M + G D +T+NT++ GK+G + A +
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 247 AVMMK-QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M G PD TY L+D N +A A+++ M G+ P + +YS +I G K
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+EA + F+ M PD + YS ++D L + AW L +M + G
Sbjct: 486 AGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTL 545
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQ----GIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
Y ++ L K + D + K +RD G+ P ++ ++L+ G C A
Sbjct: 546 YELMILGLMKENRSDD---IQKTIRDMEELCGMNPLEIS-SVLVKGEC----FDLAARQL 597
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ + GY + T ++ G EA LL +++ + E +I
Sbjct: 598 KVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALI 651
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 180/394 (45%), Gaps = 7/394 (1%)
Query: 102 ALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG---HLV-KPNVVMYN 157
A Q D+ G ++ +++ C++G + Q++ Q E H P MY
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYT 756
Query: 158 TIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK 217
II++ K KL A ++ + +PD+ T+NSL+ + G + A + + M R
Sbjct: 757 DIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD 816
Query: 218 NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKA 277
P V + N L+ AL +G ++E V+ + G K + ++D + I +
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEV 876
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG 337
I +SM G P + Y ++I LCK K V +A + +EME + ++S++
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM 936
Query: 338 LCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPD 397
++ + G D+ TYN+L+ + C+ ++ L ++MR+ G+ P
Sbjct: 937 YTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPK 996
Query: 398 VVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLS 457
+ TY L+ K+ L+ A+++F++L+ KG + Y+ M+ G +A LL
Sbjct: 997 LDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Query: 458 EMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
M++ G P T ++ + G+ +AEK+L
Sbjct: 1057 MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVL 1090
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 175/385 (45%), Gaps = 42/385 (10%)
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
MY T++ ++ ++A +FS++ + S++ +C +G + A +++++
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQ 741
Query: 214 MTRKNI----GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
K P + +++A GK+ ++A++V+ + + G PDL T+NSLM Y
Sbjct: 742 AETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYA 798
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE------------------ 311
+A AI N+M + G +P V S +I++H LC + ++E
Sbjct: 799 QCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKS 858
Query: 312 -----------ALNLF------AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
A N+F + M+ +P Y +I+ LCK R+ A +V EM
Sbjct: 859 SILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM 918
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+ +NS+L + K + + +++++ G++PD TYN L+ C++ R
Sbjct: 919 EEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRP 978
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ + Q + G + TY +I+ K+ ++A L E+ KG D + T+
Sbjct: 979 EEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTM 1038
Query: 475 ICALFEKGDNYKAEKLLREMMARGL 499
+ + G + KAEKLL+ M G+
Sbjct: 1039 MKISRDSGSDSKAEKLLQMMKNAGI 1063
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 165/375 (44%), Gaps = 40/375 (10%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P++ +N+++ + + A +F+ M+ SP V + N LL+ C+ G+L+E +
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP-------------- 256
++E+ + ++DA + GN+ E K + + M G P
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 257 ---------------------DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
+L +NS++ Y + + K + + + + G+ P+ +
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y+ +I C+++ +E L +M + + P TY SLI K + A +L +E+
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
+KG D+ Y++++ + S KA L + M++ GI+P + T ++LM G +
Sbjct: 1025 SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A++V +L +T Y+ +I+ + ++ + L EM+ +G PD I
Sbjct: 1085 EAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD-----HRI 1139
Query: 476 CALFEKGDNYKAEKL 490
F + ++ EK+
Sbjct: 1140 WTCFVRAASFSKEKI 1154
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 130/243 (53%), Gaps = 5/243 (2%)
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV--DEALNLFAE 318
YN++M Y + +KA ++++M QRG P++ S++ +I+ K+ + + A+ L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH-NKGQPADKFTYNSLLDVLCKSH 377
+ + PD ITY++L+ + + A ++ ++M ++ QP D +TYN+++ V +
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQP-DLWTYNAMISVYGRCG 346
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
+A L ++ +G PD VTYN L+ +E + +EV+Q + G+ TYN
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 438 IMINGLCKEGLFDEALALLSEMED-KGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
+I+ K+G D AL L +M+ G PDAIT+ +I +L + +A L+ EM+
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 497 RGL 499
G+
Sbjct: 467 VGI 469
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 186/463 (40%), Gaps = 46/463 (9%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G PDA+T T LI L A +++ G + +Y LI G + G+ +
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+ KP+ + Y+ ++D L + A+ L+ +M+ +P Y ++ G
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILG 552
Query: 198 F-------------------CIVGQLKEATELLD----EMTRKNIGPDV-----ITFNTL 229
C + L+ ++ L+ ++ + + + + +TL
Sbjct: 553 LMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTL 612
Query: 230 VDALGK---EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
+ LG G EA +L + + +L+ +C VN ++ A + +
Sbjct: 613 LSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAA------LDE 666
Query: 287 RGVTPNVHS--------YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
P VH Y ++H N+ EA +F+++ S++
Sbjct: 667 YFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVY 726
Query: 339 CKSGRISHAWELVDEMHNKG-QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPD 397
CK G A ++V++ KG A Y +++ K KA ++ +R G PD
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 398 VVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLS 457
+ T+N LM + G + A+ +F ++ G TV + NI+++ LC +G +E ++
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 458 EMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
E++D G + ++ A G+ ++ +K+ M A G L
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL 889
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 124/274 (45%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G I + + GY P +I+ LC VR A ++ F++ +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+++K + + ++Q+ ++++ ++P+ YNT+I C+D+ + + L +M
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ P + TY SL+ F L++A +L +E+ K + D ++T++ G+ +
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSK 1050
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A+ +L +M G++P L T + LM Y +A +L+++ V YS +I
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVID 1110
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
++K + + EM+ + PD ++ +
Sbjct: 1111 AYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 175/348 (50%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+++++ + K +A + F +M P V + N+ + G++ A EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
R I P+ T N ++ + G + + +L M + G + +YN+L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+ A+ + N M + G+ PNV +++ +IHG C+ + EA +F EM+ + + P+T+TY++L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I+G + G A+ ++M G D TYN+L+ LCK KA K++ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
P+ T++ L+ G C E+++ ++ G H +T+N++++ C+ FD A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
+L EM + D+ T + L +G + +KLL+EM + L++
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 171/349 (48%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+ +L K + + R + Q++ + P V N + SL V A + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
K+SP+ T N ++ G+C G+L + ELL +M R +++NTL+ ++G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
A + +M K G++P++ T+N+L+ G+C ++ +A + M V PN +Y+ +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
+G + + A + +M C I D +TY++LI GLCK + A + V E+ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ T+++L+ C + D+ L K M G P+ T+N+L+ C+ A +V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
+++V + + RT + + NGL +G LL EME K + ++
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 154/301 (51%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
S++ G++ A ++ + P+ TL ++ G C G++ + ++ D+ GFR
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
VSY TLI G C G ++L+L + ++PNVV +NT+I C+ + +A +F
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
EM V+P+ VTYN+L+ G+ G + A ++M I D++T+N L+ L K+
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQ 391
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
++A + + K+ + P+ T+++L+ G C+ ++ + SM + G PN ++
Sbjct: 392 AKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
++++ C+N+ D A + EM I D+ T + +GL G+ +L+ EM
Sbjct: 452 NMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEG 511
Query: 357 K 357
K
Sbjct: 512 K 512
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 163/339 (48%), Gaps = 5/339 (1%)
Query: 35 SIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLC 94
S D +F+ L T + +A ++ G+ P + + L
Sbjct: 160 SYRECDSTPRVFDSLFKT-----FAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLL 214
Query: 95 LKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV 154
+G V AL+F+ ++ N + ++ G CR G+ ++LL+ +E + V
Sbjct: 215 GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
YNT+I C+ L+S A L + M + P+VVT+N+L++GFC +L+EA+++ EM
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
N+ P+ +T+NTL++ ++G+ + A M+ G++ D+ TYN+L+ G C +
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
KA + + + + PN ++S +I G C K D L+ M P+ T++ L
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
+ C++ A +++ EM + P D T + + + L
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 142/286 (49%), Gaps = 10/286 (3%)
Query: 53 SPTPSIIEF--------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ 104
SP P + G++ +L + + G+R V+ TLI G C KG + AL+
Sbjct: 235 SPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK 294
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
+ + G + N V++ TLI G CR + + + ++ +++ V PN V YNT+I+
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
+ AF + +MV + D++TYN+L++G C + ++A + + E+ ++N+ P+
Sbjct: 355 QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
TF+ L+ N + M++ G P+ T+N L+ +C + + A +L M
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEAL-NLFAEMECIKIIPDTI 329
+R + + + + +GL K++ D+ + L EME K + ++
Sbjct: 475 VRRSIPLDSRTVHQVCNGL-KHQGKDQLVKKLLQEMEGKKFLQESF 519
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 175/348 (50%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+++++ + K +A + F +M P V + N+ + G++ A EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
R I P+ T N ++ + G + + +L M + G + +YN+L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+ A+ + N M + G+ PNV +++ +IHG C+ + EA +F EM+ + + P+T+TY++L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I+G + G A+ ++M G D TYN+L+ LCK KA K++ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
P+ T++ L+ G C E+++ ++ G H +T+N++++ C+ FD A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
+L EM + D+ T + L +G + +KLL+EM + L++
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 171/349 (48%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+ +L K + + R + Q++ + P V N + SL V A + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
K+SP+ T N ++ G+C G+L + ELL +M R +++NTL+ ++G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
A + +M K G++P++ T+N+L+ G+C ++ +A + M V PN +Y+ +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
+G + + A + +M C I D +TY++LI GLCK + A + V E+ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ T+++L+ C + D+ L K M G P+ T+N+L+ C+ A +V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
+++V + + RT + + NGL +G LL EME K + ++
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 154/301 (51%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
S++ G++ A ++ + P+ TL ++ G C G++ + ++ D+ GFR
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
VSY TLI G C G ++L+L + ++PNVV +NT+I C+ + +A +F
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
EM V+P+ VTYN+L+ G+ G + A ++M I D++T+N L+ L K+
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQ 391
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
++A + + K+ + P+ T+++L+ G C+ ++ + SM + G PN ++
Sbjct: 392 AKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
++++ C+N+ D A + EM I D+ T + +GL G+ +L+ EM
Sbjct: 452 NMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEG 511
Query: 357 K 357
K
Sbjct: 512 K 512
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 163/339 (48%), Gaps = 5/339 (1%)
Query: 35 SIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLC 94
S D +F+ L T + +A ++ G+ P + + L
Sbjct: 160 SYRECDSTPRVFDSLFKT-----FAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLL 214
Query: 95 LKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV 154
+G V AL+F+ ++ N + ++ G CR G+ ++LL+ +E + V
Sbjct: 215 GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
YNT+I C+ L+S A L + M + P+VVT+N+L++GFC +L+EA+++ EM
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
N+ P+ +T+NTL++ ++G+ + A M+ G++ D+ TYN+L+ G C +
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
KA + + + + PN ++S +I G C K D L+ M P+ T++ L
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
+ C++ A +++ EM + P D T + + + L
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 142/286 (49%), Gaps = 10/286 (3%)
Query: 53 SPTPSIIEF--------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ 104
SP P + G++ +L + + G+R V+ TLI G C KG + AL+
Sbjct: 235 SPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK 294
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
+ + G + N V++ TLI G CR + + + ++ +++ V PN V YNT+I+
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
+ AF + +MV + D++TYN+L++G C + ++A + + E+ ++N+ P+
Sbjct: 355 QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
TF+ L+ N + M++ G P+ T+N L+ +C + + A +L M
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEAL-NLFAEMECIKIIPDTI 329
+R + + + + +GL K++ D+ + L EME K + ++
Sbjct: 475 VRRSIPLDSRTVHQVCNGL-KHQGKDQLVKKLLQEMEGKKFLQESF 519
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 156/313 (49%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G + A V KI +L TLI L GE+ +A F D R N VS+
Sbjct: 130 GSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSF 189
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LIKG A+ ++ ++ V+P+VV YN++I LC++ + A +L +M+
Sbjct: 190 NILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 249
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
K++ P+ VT+ L+ G C G+ EA +L+ +M + P ++ + L+ LGK G + E
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
AK +L M K+ +KPD+ YN L++ C + +A +L M +G PN +Y ++I
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
G C+ + D LN+ M + P T+ ++ GL K G + HA +++ M K
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSF 429
Query: 362 DKFTYNSLLDVLC 374
+ +LL LC
Sbjct: 430 GSGAWQNLLSDLC 442
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 209/455 (45%), Gaps = 9/455 (1%)
Query: 7 RVSMSSFLRLNNFPVVSKPSFHSHSLSPSIHNAD--DAISIFNRLLGTSPTPSIIEFGQI 64
R +SS L +NN + S+ +H+ A + F R P + + +I
Sbjct: 2 RRRLSSVL-INNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRK-PWEEVPFLTDLKEI 59
Query: 65 P---SAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
A S+ + + G+R D + ++LI L Q V R R + +
Sbjct: 60 EDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 119
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
LI+ + G ++ + ++ + NT+I+ L + + A + F
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
++ P+ V++N L+ GF + A ++ DEM + P V+T+N+L+ L + ++ +
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
AK++L M+K+ ++P+ T+ LM G C E N+A ++ M RG P + +Y I++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
L K +DEA L EM+ +I PD + Y+ L++ LC R+ A+ ++ EM KG
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
+ TY ++D C+ D + + M P T+ ++ GL K G L +A V
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKE--GLFDEALA 454
+ + K + +++ LC + G++ EAL+
Sbjct: 420 EVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALS 454
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 168/361 (46%)
Query: 102 ALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIID 161
AL GFR + SY +LI L + A Q+LR V V+ ++ +I
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
K V A ++F ++ + + N+L+ G+L++A D + P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
+ ++FN L+ + + + A V M++ V+P + TYNSL+ C +++ KA ++L
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
M ++ + PN ++ +++ GLC +EA L +ME P + Y L+ L K
Sbjct: 245 EDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
GRI A L+ EM + D YN L++ LC V +A + +M+ +G +P+ TY
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY 364
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
+++DG C+ + V ++ + T T+ M+ GL K G D A +L M
Sbjct: 365 RMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGK 424
Query: 462 K 462
K
Sbjct: 425 K 425
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 175/361 (48%), Gaps = 1/361 (0%)
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
+L L Q + + + Y+++I L K + + + + V + L+
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
+ G + +A ++ ++T + + + NTL++ L G +++AK+ ++P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
+ ++N L+ G+ + A + + M + V P+V +Y+ +I LC+N + +A +L
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
+M +I P+ +T+ L+ GLC G + A +L+ +M +G Y L+ L K
Sbjct: 245 EDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
+D+A L +M+ + I+PDVV YNIL++ LC E R+ A V ++ +KG TY
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY 364
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
+MI+G C+ FD L +L+ M P TF ++ L KG N + E+M
Sbjct: 365 RMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI-KGGNLDHACFVLEVMG 423
Query: 497 R 497
+
Sbjct: 424 K 424
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 147/305 (48%)
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLV 230
+A +LF + D +Y+SL+Y ++L + +N+ F L+
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
GK G+V +A +V + + + N+L++ E+ KA + + +
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
PN S++I+I G + A +F EM +++ P +TY+SLI LC++ + A L
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
+++M K + T+ L+ LC ++A L M +G +P +V Y ILM L K
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
GR+ A+ + ++ + V YNI++N LC E EA +L+EM+ KGC P+A T
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT 363
Query: 471 FETII 475
+ +I
Sbjct: 364 YRMMI 368
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 144/294 (48%)
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+EA L + D ++++L+ L K N +L ++ + V+ + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+ Y ++KAI + + + + S + +I+ L N +++A + F + +++
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
P++++++ LI G A ++ DEM TYNSL+ LC++ + KA +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
L + M + I+P+ VT+ +LM GLC +G A+++ D+ +G + Y I+++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 445 KEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
K G DEA LL EM+ + PD + + ++ L + +A ++L EM +G
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 204/436 (46%), Gaps = 21/436 (4%)
Query: 65 PSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTL 124
P A SVL +L + D + L L+ L K E R DV RL Y
Sbjct: 238 PRACSVLFTLLGRERMADYILL--LLSNLPDKEEFR-------DV-----RL----YNAA 279
Query: 125 IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK-DKLVSDAFNLFSEMVVKK 183
I GL + + ++ ++ V P+ V +I +L K + + + +F +M K
Sbjct: 280 ISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKG 339
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
V + L+ FC G +EA + EM +K I + I +NTL+DA K +++E +
Sbjct: 340 VKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVE 399
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+ M +G+KP TYN LMD Y + + +L M G+ PNV SY+ +I
Sbjct: 400 GLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY 459
Query: 304 CKNK-MVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
+ K M D A + F M+ + + P + +Y++LI SG A+ +EM +G
Sbjct: 460 GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPS 519
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
TY S+LD +S K + + K M + I+ +TYN L+DG K+G A++V
Sbjct: 520 VETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVS 579
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
+ G +V TYN+++N + G + LL EM PD+IT+ T+I A F +
Sbjct: 580 EFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYA-FVRV 638
Query: 483 DNYKAEKLLREMMARG 498
++K +MM +
Sbjct: 639 RDFKRAFFYHKMMVKS 654
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 168/350 (48%), Gaps = 2/350 (0%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ-LKEATEL 210
+V +YN I L + DA+ ++ M V PD VT L+ G+ KE E+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
++M+ K + F LV + EG +EA + M K+G++ + YN+LMD Y
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
N I + + M +G+ P+ +Y+I++ + D L EME + + P+ +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 331 YSSLIDGLCKSGRISH-AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
Y+ LI ++ ++S A + M G +Y +L+ S +KA A ++M
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+GI+P V TY ++D + G E+++ ++ + T TYN +++G K+GL+
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EA ++SE G P +T+ ++ A G + K +LL+EM A L
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 151/318 (47%), Gaps = 1/318 (0%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
S + G A + ++ KKG R + + TL+ + ++ +G +
Sbjct: 353 SFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKP 412
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD-AFNL 175
+ +Y L+ R Q LLR++E ++PNV Y +I + + K +SD A +
Sbjct: 413 SAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADA 472
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F M + P +Y +L++ + + G ++A +EM ++ I P V T+ +++DA +
Sbjct: 473 FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRR 532
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G+ + + +M+++ +K TYN+L+DG+ +A +++ ++ G+ P+V +
Sbjct: 533 SGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMT 592
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y+++++ + + L EM + + PD+ITYS++I + A+ M
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMV 652
Query: 356 NKGQPADKFTYNSLLDVL 373
GQ D +Y L +L
Sbjct: 653 KSGQVPDPRSYEKLRAIL 670
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 164/390 (42%), Gaps = 37/390 (9%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGE-VRRALQFHDDVVARGFRLNQVSYGTLI 125
A+ V + K PD VT LI L G + + + + +G + +Q +G L+
Sbjct: 292 AWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLV 351
Query: 126 KGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
K C G +L + ++E ++ N ++YNT++D+ K + + LF+EM K +
Sbjct: 352 KSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLK 411
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK---------- 235
P TYN L+ + Q LL EM + P+V ++ L+ A G+
Sbjct: 412 PSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAAD 471
Query: 236 --------------------------EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
G ++A M K+G+KP + TY S++D +
Sbjct: 472 AFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFR 531
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ K + I M + + +Y+ ++ G K + EA ++ +E + + P +
Sbjct: 532 RSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVM 591
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+ L++ + G+ + +L+ EM D TY++++ + +A K M
Sbjct: 592 TYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMM 651
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
G PD +Y L L + + KN ++
Sbjct: 652 VKSGQVPDPRSYEKLRAILEDKAKTKNRKD 681
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 8/222 (3%)
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+L+++ + +V Y+ I GL ++ D+A ++ M+ I + PD +T + LI L
Sbjct: 260 LLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLR 319
Query: 340 KSGRIS-HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
K+GR + WE+ ++M KG + + L+ C ++A+ + +M +GI+ +
Sbjct: 320 KAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNT 379
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
+ YN LMD K ++ + +F ++ KG + TYNI+++ + D LL E
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
MED G P+ ++ +I A Y K + +M A L
Sbjct: 440 MEDLGLEPNVKSYTCLISA-------YGRTKKMSDMAADAFL 474
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
S++ L + +M D L L + + + D Y++ I GL S R AWE+ + M
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAI-ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
D T L+ L K+ K + + +KM ++G++ + L+ C EG +
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
A + ++ KG YN +++ K +E L +EM DKG P A T+ ++
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 476 CALFEKGDNYKAEKLLREMMARGL 499
A + E LLREM GL
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGL 445
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLG----------KILKKGYRPDAVTLTT 88
+D A F R+ PS + + A+SV G ++ K+G +P T T+
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
++ G+ + ++ ++ + +++Y TL+ G + G + ++ +
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMG 585
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
++P+V+ YN ++++ + + L EM + PD +TY++++Y F V K A
Sbjct: 586 LQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
M + PD ++ L L + K K+ A++
Sbjct: 646 FYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAIL 686
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 158/321 (49%), Gaps = 1/321 (0%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
++ + + + L S+A F+ MV + P V + LL+ C + A E +
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
I P T++ LV + + A+ V M+++ DL YN+L+D C ++
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+ + M G+ P+ +S++I IH C V A + M+ ++P+ T++ +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I LCK+ ++ A+ L+DEM KG D +TYNS++ C V++A L +M
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC-KEGLFDEAL 453
PD TYN+++ L + GR A E+++ + + ++ TV TY +MI+GL K+G +EA
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 454 ALLSEMEDKGCIPDAITFETI 474
M D+G P + T E +
Sbjct: 440 RYFEMMIDEGIPPYSTTVEML 460
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 171/348 (49%), Gaps = 1/348 (0%)
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
F ++ + + + R + + ++ +KP V + ++ SLC K V+ A
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
F + + P TY+ L+ G+ + A ++ DEM +N D++ +N L+DAL
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
K G+V + M G+KPD +++ + YC +++ A +L+ M + + PNV
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
++++ II LCKN+ VD+A L EM PDT TY+S++ C ++ A +L+
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC-KEG 412
M D+ TYN +L +L + D+A + + M ++ P V TY +++ GL K+G
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME 460
+L+ A F+ ++ +G T ++ N L G D L +ME
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%), Gaps = 2/330 (0%)
Query: 62 GQIPS-AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS 120
+PS A ++++ G +P L L+ LC K V A +F G + +
Sbjct: 151 ANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKT 210
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
Y L++G R+ + ++ ++ +++ YN ++D+LCK V + +F EM
Sbjct: 211 YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMG 270
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
+ PD ++ ++ +C G + A ++LD M R ++ P+V TFN ++ L K V
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVD 330
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
+A +L M+++G PD +TYNS+M +C E+N+A +L+ M + P+ H+Y++++
Sbjct: 331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC-KSGRISHAWELVDEMHNKGQ 359
L + D A ++ M K P TY+ +I GL K G++ A + M ++G
Sbjct: 391 KLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
P T L + L +D L KM
Sbjct: 451 PPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%)
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
Y N ++A N M + G+ P V ++H LC K V+ A F + + I+P
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
TYS L+ G + S A ++ DEM + D YN+LLD LCKS VD +
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
++M + G++PD ++ I + C G + +A +V + V T+N +I LCK
Sbjct: 267 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 326
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
D+A LL EM KG PD T+ +I+ + + +A KLL M
Sbjct: 327 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%)
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
EA + M I P V + L+ +L + +V A+ G+ P TY+ L+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
G+ + + + A + + M +R ++ +Y+ ++ LCK+ VD +F EM + +
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
PD +++ I C +G + A++++D M + +T+N ++ LCK+ VD A L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
+M +G PD TYN +M C + A ++ + TYN+++ L +
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
G FD A + M ++ P T+ +I L K + EMM
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%)
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
F + A + EA M++ G+KP + + L+ C +N A
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
G+ P+ +YSI++ G + + A +F EM + D + Y++L+D LCKSG +
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
+++ EM N G D +++ + C + V A + +M+ + P+V T+N ++
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
LCK ++ +A + +++ KG + TYN ++ C + A LLS M+ C+
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMAR 497
PD T+ ++ L G +A ++ M R
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSER 412
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 7/181 (3%)
Query: 325 IPDTI----TYSSLIDGLCKSGRISHAWELVDEM--HNKGQPADKFTYNSLLDVLCKSHH 378
IPD +Y L++ L S + + W+ + E +N + + K + + +++
Sbjct: 95 IPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSK-VFWIVFRAYSRANL 153
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
+A +M + GI+P V + L+ LC + + +AQE F G + +TY+I
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 213
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
++ G + A + EM ++ C+ D + + ++ AL + GD K+ +EM G
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 499 L 499
L
Sbjct: 274 L 274
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 168/327 (51%), Gaps = 5/327 (1%)
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKV---SPDVVTYNSLLYGFCIVGQLKEATELL 211
++ + ID+ C+ + + A F M K++ P+V YN+++ G+ G + +A
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
M ++ PDV TFN L++ + A ++ M ++G +P++ ++N+L+ G+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+I + + + M + G + + I++ GLC+ VD+A L ++ +++P Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
SL++ LC + A E+++E+ KGQ +L++ L KS +KA +KM +
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
GI PD VT+N+L+ LC +A + KGY TY+++++G KEG E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 452 ALALLSEMEDKGCIPDAITFETIICAL 478
L++EM DK +PD T+ ++ L
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 161/333 (48%), Gaps = 7/333 (2%)
Query: 121 YGTLIKGLCRMGQTRASL----QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ + I CR + +L + R ++G KPNV +YNT+++ K + A +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG---KPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
M ++ PDV T+N L+ G+C + A +L EM K P+V++FNTL+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
G ++E + M++ G + T L+DG C ++ A ++ + + V P+ Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
++ LC A+ + E+ P I ++L++GL KSGR A +++M N
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
G D T+N LL LC S H A L +G +PD TY++L+ G KEGR K
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 417 AQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ + +++ K + TYN +++GL G F
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 152/298 (51%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
Y T++ G + G +L+ +++ KP+V +N +I+ C+ A +LF EM
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
K P+VV++N+L+ GF G+++E ++ EM T LVD L +EG V
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
+A ++ ++ + V P F Y SL++ C N+ +A+ ++ + ++G TP + + ++
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
GL K+ ++A +M I+PD++T++ L+ LC S + A L +KG
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
D+ TY+ L+ K + L +M D+ + PD+ TYN LMDGL G+ Q
Sbjct: 436 PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 135/288 (46%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
++ G + A ++ K+ +PD T LI G C + AL ++ +G N
Sbjct: 204 VKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNV 263
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
VS+ TLI+G G+ +++ ++ + + ++D LC++ V DA L +
Sbjct: 264 VSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLD 323
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
++ K+V P Y SL+ C + A E+++E+ +K P I TLV+ L K G
Sbjct: 324 LLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
++A + MM G+ PD T+N L+ C + A + + +G P+ +Y +
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
++ G K E L EM ++PD TY+ L+DGL +G+ S
Sbjct: 444 LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 123/236 (52%)
Query: 255 KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN 314
KP++ YN++++GY +++KA+ M + P+V +++I+I+G C++ D AL+
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC 374
LF EM+ P+ +++++LI G SG+I ++ EM G + T L+D LC
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ VD A L + ++ + P Y L++ LC E + A E+ ++L KG
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
++ GL K G ++A + +M + G +PD++TF ++ L + A +L
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQR-GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
+ S +D YC +++ A+ ++M + PNV Y+ +++G K+ +D+AL + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
+ PD T++ LI+G C+S + A +L EM KG + ++N+L+ S +
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
++ + + +M + G + T IL+DGLC+EGR+ +A + DL+ K + Y +
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ LC E A+ ++ E+ KG P I T++ L + G KA + +MM G+
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 500 L 500
L
Sbjct: 400 L 400
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 131/282 (46%), Gaps = 11/282 (3%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLT 87
+ D A+ + R+ P + F + A + ++ +KG P+ V+
Sbjct: 208 DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
TLI+G G++ ++ +++ G R ++ + L+ GLCR G+ + L+ +
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
V P+ Y ++++ LC + A + E+ K +P + +L+ G G+ ++A
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+ +++M I PD +TFN L+ L + +A + + +G +PD TY+ L+ G
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSG 447
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL-CKNKM 308
+ + ++N M + + P++ +Y+ ++ GL C K
Sbjct: 448 FTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 10/247 (4%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI----------LKKGYRPDAVTLTTL 89
D A+ +F + P+++ F + F GKI ++ G R T L
Sbjct: 245 DLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEIL 304
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
+ GLC +G V A D++ + ++ YG+L++ LC + +++++ ++
Sbjct: 305 VDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQ 364
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
P + T+++ L K A +M+ + PD VT+N LL C +A
Sbjct: 365 TPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANR 424
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L + K PD T++ LV KEG KE + ++ M+ + + PD+FTYN LMDG
Sbjct: 425 LRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLS 484
Query: 270 LVNEINK 276
+ ++
Sbjct: 485 CTGKFSR 491
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 173/350 (49%), Gaps = 16/350 (4%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
YN +I+SL K K ++L +M KK+ T+ + + ++KEA +M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY------C 269
+ FN ++D L K NV +A+ V M K+ +PD+ +Y L++G+
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
V+E+N+ M G P+V +Y III+ CK K +EA+ F EME P
Sbjct: 250 RVDEVNR------EMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPH 303
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+ SLI+GL +++ A E + + G P + TYN+L+ C S ++ A +M
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM 363
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
R +G+ P+ TY+I++ L + R K A EV+Q + + TV TY IM+ C +
Sbjct: 364 RLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEP---TVSTYEIMVRMFCNKERL 420
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D A+ + EM+ KG +P F ++I AL + +A + EM+ G+
Sbjct: 421 DMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 8/385 (2%)
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH--LVKPNVVMYNTIIDSLCKDKLV 169
+GF+ +Y LI+ L ++ Q + L+ ++ L K + + K K
Sbjct: 122 KGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEA 181
Query: 170 SDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTL 229
AF+ E K S D +N +L + +A ++ D+M +K PD+ ++ L
Sbjct: 182 IGAFHKMEEFGFKMESSD---FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
++ G+E N+ V M +G +PD+ Y +++ +C + +AI N M QR
Sbjct: 239 LEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 298
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
P+ H + +I+GL K +++AL F + + TY++L+ C S R+ A++
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 350 LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
VDEM KG + TY+ +L L + +A + + M +P V TY I++ C
Sbjct: 359 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC 415
Query: 410 KEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
+ RL A +++ ++ KG + ++ +I LC E DEA +EM D G P
Sbjct: 416 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGH 475
Query: 470 TFETIICALFEKGDNYKAEKLLREM 494
F + L ++G K L+ +M
Sbjct: 476 MFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 141/312 (45%), Gaps = 37/312 (11%)
Query: 44 SIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRAL 103
S FNR+L T + + + A V K+ KK + PD + T L++G + + R
Sbjct: 198 SDFNRMLDT-----LSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVD 252
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
+ + ++ GF + V+YG +I C+ + +++ ++E KP+ ++ ++I+ L
Sbjct: 253 EVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
+K ++DA F + TYN+L+ +C ++++A + +DEM K +GP+
Sbjct: 313 GSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNA 372
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVM-------------------------------MK- 251
T++ ++ L + KEA V M MK
Sbjct: 373 RTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKG 432
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
+GV P + ++SL+ C N++++A N M G+ P H +S + L D+
Sbjct: 433 KGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDK 492
Query: 312 ALNLFAEMECIK 323
+L +M+ ++
Sbjct: 493 VTDLVVKMDRLR 504
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 193/405 (47%), Gaps = 17/405 (4%)
Query: 37 HNADDAISIFNRL--LGTSPTPSII--------EFGQIPSAFSVLGKILKKGYRPDAVTL 86
++ D A +I + + LG PT +I + G++ A K+L+ G +PD +
Sbjct: 561 NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAY 620
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
+I G + A + ++VV R + +Y LI G +MG Q L ++
Sbjct: 621 MIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 680
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
+ PNVV+Y +I K +F LF M + D + Y +LL G K+
Sbjct: 681 DGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKK 740
Query: 207 ATELLDEMTRKNIGPDVITFNTLV---DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+++ E ++ + +I LV +LG G+ A V+ +K+ + P+L+ +N+
Sbjct: 741 KRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIG-KVKKSIIPNLYLHNT 799
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
++ GYC +++A L SM + G+ PN+ +Y+I++ + ++ A++LF C
Sbjct: 800 IITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNC-- 857
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
PD + YS+L+ GLC R A L+ EM G +K +Y LL LC S +A+
Sbjct: 858 -EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAV 916
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
+ K M I P + + L+ LC+E +L+ A+ +F +V G
Sbjct: 917 KVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 212/473 (44%), Gaps = 31/473 (6%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+++ + A + L +I+ GY P + + ++ LC + A + V RG L
Sbjct: 141 LVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLW 200
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP-NVVMYNTIIDSLCKDKLVSDAFNLF 176
L KGLC G ++ +L + G P V +Y ++ CK ++A LF
Sbjct: 201 LWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALF 260
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
M V D V Y L+ +C + A L M ++ D FNTL+ K
Sbjct: 261 DHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKL 320
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI-LNSMAQRGVTPNVHS 295
G + + + + + M+K+GV+ ++FTY+ ++ YC ++ A+ + +N+ ++ NVH
Sbjct: 321 GMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHC 380
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y+ +I G K +D+A++L M I+PD ITY L+ L K + +A ++ +
Sbjct: 381 YTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSIL 440
Query: 356 NKGQPADKFTYNSLLDV-----------------------------LCKSHHVDKAIALT 386
+ G + + L ++ LC + A++
Sbjct: 441 DNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRI 500
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+KM + G P +YN ++ L +E +++ + + + V TY I++N LCK+
Sbjct: 501 EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKK 560
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D A A++ ME+ G P + +II +L ++G +AE+ +M+ G+
Sbjct: 561 NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGI 613
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/541 (23%), Positives = 216/541 (39%), Gaps = 80/541 (14%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF-----------GQIPSAFSVLGKILKKGYRPDAVTLTT 88
++AI + + L G + P + G A ++ + GY D V T
Sbjct: 218 NEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTC 277
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
L+K C + A++ + +V R F L+ + TLI G ++G + Q+
Sbjct: 278 LMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKG 337
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLF-----SEMVVKKVS------------------ 185
V+ NV Y+ +I S CK+ V A LF SE + + V
Sbjct: 338 VQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKA 397
Query: 186 -------------PDVVTYNSLL----------YGFCIV------------------GQL 204
PD +TY LL Y I+ G +
Sbjct: 398 VDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNI 457
Query: 205 KEATE-LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+ E LL E+ RK+ + + AL + N A + + M+ G P F+YNS
Sbjct: 458 EVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNS 517
Query: 264 LMDGYCLVNE--INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
++ CL E I +++N + + P+V +Y I+++ LCK D A + ME
Sbjct: 518 VIK--CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEE 575
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
+ + P YSS+I L K GR+ A E +M G D+ Y +++ ++ +D+
Sbjct: 576 LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDE 635
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
A L +++ ++P TY +L+ G K G ++ + ++ G V Y +I
Sbjct: 636 ANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIG 695
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLE 501
K+G F + L M + D I + T++ L+ K +++ E LL+
Sbjct: 696 HFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQ 755
Query: 502 K 502
+
Sbjct: 756 R 756
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/542 (21%), Positives = 219/542 (40%), Gaps = 81/542 (14%)
Query: 34 PSIHNADDAISIFNRLL----GTSPTPSIIEFGQIPSAF-SVLGKILKKGYRPDAVTLTT 88
P H A+ I +L G +P P I + G I S+LG+I +K AV L
Sbjct: 424 PKCHELKYAMVILQSILDNGCGINP-PVIDDLGNIEVKVESLLGEIARKDANLAAVGLAV 482
Query: 89 LIKGLCLKGEVRRALQFHDDVVARG-----FRLNQV------------------------ 119
+ LC + AL + +V G F N V
Sbjct: 483 VTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELD 542
Query: 120 ------SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
+Y ++ LC+ A+ ++ +E ++P V +Y++II SL K V +A
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
F++M+ + PD + Y ++ + G++ EA EL++E+ + + P T+ L+
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
K G +++ L M++ G+ P++ Y +L+ + + + + M + + +
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAE--------------------------------MEC 321
+Y ++ GL + + + E ME
Sbjct: 723 IAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEV 782
Query: 322 I-----KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
I IIP+ ++++I G C +GR+ A+ ++ M +G + TY L+ ++
Sbjct: 783 IGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEA 842
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
++ AI L +PD V Y+ L+ GLC R +A + ++ G + +Y
Sbjct: 843 GDIESAIDL---FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSY 899
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
++ LC L EA+ ++ +M P +I +I L E+ +A L M+
Sbjct: 900 EKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQ 959
Query: 497 RG 498
G
Sbjct: 960 SG 961
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 193/454 (42%), Gaps = 33/454 (7%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN---- 117
G + A +L ++L G PD +T L+K L E++ A+ ++ G +N
Sbjct: 392 GGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVI 451
Query: 118 -------------------------QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN 152
V + LC A+L + ++ P
Sbjct: 452 DDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPL 511
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
YN++I L ++ ++ D +L + + PDV TY ++ C A ++D
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
M + P V +++++ +LGK+G V EA+ A M++ G++PD Y +++ Y
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
I++A ++ + + + P+ +Y+++I G K M+++ +M + P+ + Y+
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS-HHVDKAIALTKKMRD 391
+LI K G ++ L M D Y +LL L ++ K + + ++
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 392 QGIQPDVVTYNILM--DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ +Q + T ++ L G A EV V K + +N +I G C G
Sbjct: 752 KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIITGYCAAGRL 810
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
DEA L M+ +G +P+ +T+ ++ + E GD
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGD 844
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 171/386 (44%), Gaps = 50/386 (12%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+A F ++L + P I + G+I A ++ +++K RP + T T LI
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
G G + + Q+ D ++ G N V Y LI + G + S L + + +K
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 151 PNVVMYNTIIDSLC----------------KDKLVSDAFNL-----------------FS 177
+ + Y T++ L K+KL+ F+
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFA 779
Query: 178 EMVVKKVS----PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
V+ KV P++ +N+++ G+C G+L EA L+ M ++ I P+++T+ L+ +
Sbjct: 780 MEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSH 839
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
+ G+++ A ++ +PD Y++L+ G C A+A++ M + G+ PN
Sbjct: 840 IEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNK 896
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
SY ++ LC +++ EA+ + +M + I P +I ++ LI LC+ ++ A L
Sbjct: 897 DSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAI 956
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHV 379
M G+ T LL +L ++ +
Sbjct: 957 MVQSGRSLLNCTKPGLLKMLNQNQQL 982
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 153/368 (41%), Gaps = 38/368 (10%)
Query: 107 DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKD 166
D V G L+ YG LI+ L MGQ P V
Sbjct: 84 DFAVDNGIELDSSCYGALIRKLTEMGQ-----------------PGV------------- 113
Query: 167 KLVSDAFNLFSEMVV-KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVIT 225
A +++ V+ + PD +S+++ + + EA LD + P +
Sbjct: 114 -----AETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNS 168
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
+ +VD L + EA + + ++G L+ L G C +N+AI +L+++
Sbjct: 169 SSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLC 228
Query: 286 QRGVTP-NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
P V+ Y + + CK EA LF ME D + Y+ L+ CK +
Sbjct: 229 GMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNM 288
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
+ A L M + D +N+L+ K +DK + +M +G+Q +V TY+I+
Sbjct: 289 TMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIM 348
Query: 405 MDGLCKEGRLKNAQEVF-QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
+ CKEG + A +F + + V Y +I G K+G D+A+ LL M D G
Sbjct: 349 IGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNG 408
Query: 464 CIPDAITF 471
+PD IT+
Sbjct: 409 IVPDHITY 416
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 3/317 (0%)
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKN-IGPDVITFNTLVDALGKEGNVKEAKNV 245
D Y +L+ +GQ A ++ N I PD +++V L K EA+
Sbjct: 94 DSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAH 153
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
L ++ G P + + ++D C + +A + +RG + + GLC
Sbjct: 154 LDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCG 213
Query: 306 NKMVDEALNLFAEMECIKIIPDTIT-YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
+ ++EA+ + + + +P + Y SL CK G + A L D M G DK
Sbjct: 214 HGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKV 273
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
Y L+ CK +++ A+ L +M ++ + D +N L+ G K G L + +F +
Sbjct: 274 MYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQM 333
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI-TFETIICALFEKGD 483
+ KG V TY+IMI CKEG D AL L I + + +I ++KG
Sbjct: 334 IKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGG 393
Query: 484 NYKAEKLLREMMARGLL 500
KA LL M+ G++
Sbjct: 394 MDKAVDLLMRMLDNGIV 410
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 157/318 (49%), Gaps = 5/318 (1%)
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
K P++ +N LL C G +KE LL M R + PD TFN L + + K+A
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKA 287
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT---PNVHSYSII 299
+L M++ G KP+ FTY + +D +C +++A + + M +G P +++++
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I L KN +E L M +PD TY +I+G+C + ++ A++ +DEM NKG
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
P D TYN L VLC++ D+A+ L +M + P V TYN+L+ + A
Sbjct: 408 PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
+ ++ + V TY MINGL EA LL E+ +KG F++ + L
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLS 527
Query: 480 EKGDNYKAEKLLREMMAR 497
E G N KA + E M +
Sbjct: 528 EVG-NLKAIHKVSEHMKK 544
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 178/358 (49%), Gaps = 17/358 (4%)
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMV--VKKVSPDVVTYNSLL---YGFCIVGQLKEAT 208
+ YN +ID L K + F + +M+ +K+ + VV + LL +C + T
Sbjct: 160 IAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYC----ERYLT 215
Query: 209 ELLDEMTRKNI----GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+ RK I P++ FN L+DAL K G VKE + +L M+ VKPD T+N L
Sbjct: 216 HVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLR-RMRHRVKPDANTFNVL 274
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM---EC 321
G+C V + KA+ +L M + G P +Y I C+ MVDEA +LF M
Sbjct: 275 FFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGS 334
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
P T++ +I L K+ + +EL+ M + G D TY +++ +C + VD+
Sbjct: 335 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDE 394
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
A +M ++G PD+VTYN + LC+ + A +++ +V +V+TYN++I+
Sbjct: 395 AYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ D A +EM+ + C+ D T+ +I LF+ +A LL E++ +GL
Sbjct: 455 MFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++ L+ LC+ G + LLR++ H VKP+ +N + C+ + A L EM
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG---PDVITFNTLVDALGKE 236
+ P+ TY + + FC G + EA +L D M K P TF ++ AL K
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
+E ++ M+ G PD+ TY +++G C+ ++++A L+ M+ +G P++ +Y
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+ + LC+N+ DEAL L+ M + P TY+ LI + A+ EM
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 474
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
+ D TY ++++ L H +A L +++ ++G++ ++ + L + G LK
Sbjct: 475 RDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKA 534
Query: 417 AQEVFQDLVIKGYHVTVRTYNI 438
+V + + H R + +
Sbjct: 535 IHKVSEHMKKFYNHSMARRFAL 556
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 6/303 (1%)
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
+P + +N ++D+LCK LV + L M +V PD T+N L +G+C V K+A
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK---PDLFTYNSLM 265
+LL+EM P+ T+ +D + G V EA ++ M+ +G P T+ ++
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
++ + ++ M G P+V +Y +I G+C + VDEA EM
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
PD +TY+ + LC++ + A +L M ++ P+ + TYN L+ + + D A
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQ-TYNMLISMFFEMDDPDGAFN 467
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
+M + DV TY +++GL R K A + +++V KG + R ++ + L
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLS 527
Query: 445 KEG 447
+ G
Sbjct: 528 EVG 530
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKE-----GNVKEAKNVLAVMMKQGVKPD 257
Q + ++LD M R N V+ + L++ L K +V++ + +K +P+
Sbjct: 178 QFRIVIDMLDYMKRNN--KTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVK--TQPE 233
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
+ +N L+D C + + A+L M R V P+ ++++++ G C+ + +A+ L
Sbjct: 234 INAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLE 292
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ----PADKFTYNSLLDVL 373
EM P+ TY + ID C++G + A +L D M KG P K T+ ++ L
Sbjct: 293 EMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK-TFALMIVAL 351
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
K+ ++ L +M G PDV TY +++G+C ++ A + ++ KGY +
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLRE 493
TYN + LC+ DEAL L M + C P T+ +I FE D A E
Sbjct: 412 VTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE 471
Query: 494 MMARGLLE 501
M R ++
Sbjct: 472 MDKRDCVQ 479
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 9/280 (3%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA 102
I+ FN LL +++ G+ L + ++ +PDA T L G C + ++A
Sbjct: 234 INAFNMLLDALCKCGLVKEGE------ALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKA 287
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV--EGHLVK-PNVVMYNTI 159
++ ++++ G + +Y I C+ G + L + +G V P + +
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
I +L K+ + F L M+ PDV TY ++ G C+ ++ EA + LDEM+ K
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
PD++T+N + L + EA + M++ P + TYN L+ + +++ + A
Sbjct: 408 PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
M +R +V +Y +I+GL EA L E+
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEV 507
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%)
Query: 68 FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKG 127
F ++G+++ G PD T +I+G+C+ +V A +F D++ +G+ + V+Y ++
Sbjct: 361 FELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRV 420
Query: 128 LCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
LC +T +L+L ++ P+V YN +I + AFN ++EM + D
Sbjct: 421 LCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQD 480
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
V TY +++ G + KEA LL+E+ K + F++ + L + GN+K V
Sbjct: 481 VETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSE 540
Query: 248 VMMK 251
M K
Sbjct: 541 HMKK 544
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 3/212 (1%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYR---PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARG 113
+ + G + A + ++ KG P A T +I L + + +++ G
Sbjct: 312 TFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG 371
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
+ +Y +I+G+C + + + L ++ P++V YN + LC+++ +A
Sbjct: 372 CLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEAL 431
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
L+ MV + +P V TYN L+ F + A EM +++ DV T+ +++ L
Sbjct: 432 KLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 491
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
KEA +L ++ +G+K ++S +
Sbjct: 492 FDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD--QGIQPDVVTYNILMDGLCK-- 410
H + + YN ++D+L + + +K + M D + VV ++L++ L K
Sbjct: 151 HQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYC 210
Query: 411 EGRLKNAQEVFQDLVIK-GYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
E L + Q+ + I+ + +N++++ LCK GL E ALL M + PDA
Sbjct: 211 ERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDAN 269
Query: 470 TFETIICALFEKGDNYKAEKLLREMMARG 498
TF + D KA KLL EM+ G
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAG 298
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 155/296 (52%), Gaps = 2/296 (0%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ +Y LI G + G +L+L ++ VKP V + T+I LCKD V +A +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 177 SEMV-VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
+M+ V V P V Y SL+ C +G+L A +L DE I D ++TL+ +L K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G E +L M ++G KPD TYN L++G+C+ N+ A +L+ M ++G+ P+V S
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y++I+ + K +EA LF +M PDT++Y + DGLC+ + A ++DEM
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
KG + L LC+S ++ + + +GI D +++++ +CKE
Sbjct: 391 FKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKE 445
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 190/380 (50%), Gaps = 17/380 (4%)
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL-----VKPNVVMYNTIIDSLCKD 166
R FR + + Y +I ++G ++ L QV HL + P +++ +I+ +
Sbjct: 41 RPFRYSLLCYDIIIT---KLGGSKM-FDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRG 96
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL---DEMTRKNIGPDV 223
KL S A ++F EM + V + NSLL G+L++ E L DE + PD
Sbjct: 97 KLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGK----PDA 152
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
T+N L+ + G +A + M+K+ VKP T+ +L+ G C + + +A+ + +
Sbjct: 153 CTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHD 212
Query: 284 MAQ-RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
M + GV P VH Y+ +I LC+ + A L E KI D YS+LI L K+G
Sbjct: 213 MLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAG 272
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
R + +++EM KG D TYN L++ C + + A + +M ++G++PDV++YN
Sbjct: 273 RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYN 332
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
+++ + + + A +F+D+ +G +Y I+ +GLC+ F+EA +L EM K
Sbjct: 333 MILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFK 392
Query: 463 GCIPDAITFETIICALFEKG 482
G P E + L E G
Sbjct: 393 GYKPRRDRLEGFLQKLCESG 412
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 194/391 (49%), Gaps = 9/391 (2%)
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP------NVVMYNTIIDSLCKDKLV 169
+ VS L L R A+++L R + P +++ Y+ II L K+
Sbjct: 4 VKSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMF 63
Query: 170 SDAFNLFSEMVVK-KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
+ + + ++ P + + +++ F A + DEM + V + N+
Sbjct: 64 DELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNS 123
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
L+ AL K G +++ K L+ + + G KPD TYN L+ G + A+ + + M ++
Sbjct: 124 LLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKK 182
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGLCKSGRISHA 347
V P ++ +IHGLCK+ V EAL + +M + + P Y+SLI LC+ G +S A
Sbjct: 183 VKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFA 242
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
++L DE + D Y++L+ L K+ ++ + ++M ++G +PD VTYN+L++G
Sbjct: 243 FKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING 302
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
C E ++A V ++V KG V +YN+++ + ++EA L +M +GC PD
Sbjct: 303 FCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPD 362
Query: 468 AITFETIICALFEKGDNYKAEKLLREMMARG 498
+++ + L E +A +L EM+ +G
Sbjct: 363 TLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 27/313 (8%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV 99
DDA+ +F+ + +KK +P VT TLI GLC V
Sbjct: 169 DDALKLFDEM-------------------------VKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 100 RRALQF-HDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNT 158
+ AL+ HD + G R Y +LIK LC++G+ + +L + +K + +Y+T
Sbjct: 204 KEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYST 263
Query: 159 IIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKN 218
+I SL K ++ + EM K PD VTYN L+ GFC+ + A +LDEM K
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 219 IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAI 278
+ PDVI++N ++ + +EA + M ++G PD +Y + DG C + +A
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAA 383
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
IL+ M +G P + LC++ ++ + + + I D +S +I +
Sbjct: 384 VILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTM 442
Query: 339 CKSGRISHAWELV 351
CK IS + +L+
Sbjct: 443 CKEPVISDSIDLL 455
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
PD TY+ LI G +SG A +L DEM K T+ +L+ LCK V +A+ +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 386 TKKM-RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
M + G++P V Y L+ LC+ G L A ++ + V Y+ +I+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 445 KEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
K G +E +L EM +KGC PD +T+ +I + D+ A ++L EM+ +GL
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
++ + G++ AF + + + + DA +TLI L G +++ +G +
Sbjct: 232 ALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKP 291
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ V+Y LI G C + ++ ++L ++ +KP+V+ YN I+ + K +A LF
Sbjct: 292 DTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLF 351
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
+M + SPD ++Y + G C Q +EA +LDEM K P + L +
Sbjct: 352 EDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCES 411
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAI-AILNSMAQRG 288
G ++ V++ + + G+ D ++ ++ C I+ +I +LN++ + G
Sbjct: 412 GKLEILSKVISSLHR-GIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVKEDG 463
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 1/303 (0%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
GF+ + +Y T++ L R Q A +LL ++ +PN V YN +I S + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
N+F++M PD VTY +L+ G L A ++ M + PD T++ +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
LGK G++ A + M+ QG P+L TYN +MD + A+ + M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+YSI++ L ++EA +F EM+ IPD Y L+D K+G + AW+
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M + G + T NSLL + + + +A L + M G++P + TY +L+ C +G
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Query: 413 RLK 415
R K
Sbjct: 658 RSK 660
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 18/395 (4%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV-----------RRALQFHDDVVAR 112
+PS FS + KG P LT+ + C G + R + +
Sbjct: 270 VPSGFSNSSVEMMKG--PSGTALTS--RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNL 325
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G R++ ++K + G L++ G K + Y T++ +L + K
Sbjct: 326 GLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPG--FKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
L EMV P+ VTYN L++ + L EA + ++M PD +T+ TL+D
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
K G + A ++ M G+ PD FTY+ +++ + A + M +G TPN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ +Y+I++ K + AL L+ +M+ PD +TYS +++ L G + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
EM K D+ Y L+D+ K+ +V+KA + M G++P+V T N L+ +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
++ A E+ Q+++ G +++TY ++++ C +G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D T+ T+V LG+ +L M++ G +P+ TYN L+ Y N +N+A+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
N M + G P+ +Y +I K +D A++++ M+ + PDT TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G + A +L EM ++G + TYN ++D+ K+ + A+ L + M++ G +PD VTY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
+I+M+ L G L+ A+ VF ++ K + Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G P+ T +++ +A +LL+ M+A GL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%)
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D TY +++ Q +LLDEM R P+ +T+N L+ + G+ + EA NV
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M + G KPD TY +L+D + ++ A+ + M G++P+ +YS+II+ L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
+ A LF EM P+ +TY+ ++D K+ +A +L +M N G DK TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
+ +++VL ++++A A+ +M+ + PD Y +L+D K G ++ A + +Q ++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
G V T N +++ + EA LL M G P T+ ++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 132/249 (53%)
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+ G K D TY +++ + +L+ M + G PN +Y+ +IH + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
EA+N+F +M+ PD +TY +LID K+G + A ++ M G D FTY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
+ L K+ H+ A L +M DQG P++VTYNI+MD K +NA ++++D+ G+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
TY+I++ L G +EA A+ +EM+ K IPD + ++ + G+ KA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 491 LREMMARGL 499
+ M+ GL
Sbjct: 597 YQAMLHAGL 605
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 175/388 (45%), Gaps = 64/388 (16%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+FG I +L ++++ G +P+ VT LI + A+ + + G + ++V
Sbjct: 379 QFGAINK---LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y TLI + G ++ + ++++ + P+ Y+ II+ L K + A LF EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 180 VVKKVSPDVVTYNSLL-------------------------------------YGFCIVG 202
V + +P++VTYN ++ G C G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--G 553
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
L+EA + EM +KN PD + LVD GK GNV++A M+ G++P++ T N
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH-----------GLCKNKMVDE 311
SL+ + VN+I +A +L +M G+ P++ +Y++++ G C M
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMAST 673
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
A M +K+ ++ DG +HA +D MH++ + + + ++++D
Sbjct: 674 GHP--AHMFLLKMP------AAGPDG---ENVRNHANNFLDLMHSEDRESKRGLVDAVVD 722
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVV 399
L KS ++A ++ + + + PD +
Sbjct: 723 FLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 127/249 (51%), Gaps = 4/249 (1%)
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPNVHSYSIIIHGLCKNKMVDE 311
G++ D + N ++ +N+ A+ + Q G + H+Y+ ++ L + K
Sbjct: 326 GLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGA 382
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
L EM P+T+TY+ LI ++ ++ A + ++M G D+ TY +L+D
Sbjct: 383 INKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
+ K+ +D A+ + ++M+ G+ PD TY+++++ L K G L A ++F ++V +G
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
+ TYNIM++ K + AL L +M++ G PD +T+ ++ L G +AE +
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 492 REMMARGLL 500
EM + +
Sbjct: 563 TEMQQKNWI 571
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 1/303 (0%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
GF+ + +Y T++ L R Q A +LL ++ +PN V YN +I S + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
N+F++M PD VTY +L+ G L A ++ M + PD T++ +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
LGK G++ A + M+ QG P+L TYN +MD + A+ + M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+YSI++ L ++EA +F EM+ IPD Y L+D K+G + AW+
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M + G + T NSLL + + + +A L + M G++P + TY +L+ C +G
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Query: 413 RLK 415
R K
Sbjct: 658 RSK 660
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 18/395 (4%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV-----------RRALQFHDDVVAR 112
+PS FS + KG P LT+ + C G + R + +
Sbjct: 270 VPSGFSNSSVEMMKG--PSGTALTS--RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNL 325
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G R++ ++K + G L++ G K + Y T++ +L + K
Sbjct: 326 GLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPG--FKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
L EMV P+ VTYN L++ + L EA + ++M PD +T+ TL+D
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
K G + A ++ M G+ PD FTY+ +++ + A + M +G TPN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ +Y+I++ K + AL L+ +M+ PD +TYS +++ L G + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
EM K D+ Y L+D+ K+ +V+KA + M G++P+V T N L+ +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
++ A E+ Q+++ G +++TY ++++ C +G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D T+ T+V LG+ +L M++ G +P+ TYN L+ Y N +N+A+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
N M + G P+ +Y +I K +D A++++ M+ + PDT TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G + A +L EM ++G + TYN ++D+ K+ + A+ L + M++ G +PD VTY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
+I+M+ L G L+ A+ VF ++ K + Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G P+ T +++ +A +LL+ M+A GL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%)
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D TY +++ Q +LLDEM R P+ +T+N L+ + G+ + EA NV
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M + G KPD TY +L+D + ++ A+ + M G++P+ +YS+II+ L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
+ A LF EM P+ +TY+ ++D K+ +A +L +M N G DK TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
+ +++VL ++++A A+ +M+ + PD Y +L+D K G ++ A + +Q ++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
G V T N +++ + EA LL M G P T+ ++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 132/249 (53%)
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+ G K D TY +++ + +L+ M + G PN +Y+ +IH + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
EA+N+F +M+ PD +TY +LID K+G + A ++ M G D FTY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
+ L K+ H+ A L +M DQG P++VTYNI+MD K +NA ++++D+ G+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
TY+I++ L G +EA A+ +EM+ K IPD + ++ + G+ KA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 491 LREMMARGL 499
+ M+ GL
Sbjct: 597 YQAMLHAGL 605
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 175/388 (45%), Gaps = 64/388 (16%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+FG I +L ++++ G +P+ VT LI + A+ + + G + ++V
Sbjct: 379 QFGAINK---LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y TLI + G ++ + ++++ + P+ Y+ II+ L K + A LF EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 180 VVKKVSPDVVTYNSLL-------------------------------------YGFCIVG 202
V + +P++VTYN ++ G C G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--G 553
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
L+EA + EM +KN PD + LVD GK GNV++A M+ G++P++ T N
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH-----------GLCKNKMVDE 311
SL+ + VN+I +A +L +M G+ P++ +Y++++ G C M
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMAST 673
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
A M +K+ ++ DG +HA +D MH++ + + + ++++D
Sbjct: 674 GHP--AHMFLLKMP------AAGPDG---ENVRNHANNFLDLMHSEDRESKRGLVDAVVD 722
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVV 399
L KS ++A ++ + + + PD +
Sbjct: 723 FLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 127/249 (51%), Gaps = 4/249 (1%)
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPNVHSYSIIIHGLCKNKMVDE 311
G++ D + N ++ +N+ A+ + Q G + H+Y+ ++ L + K
Sbjct: 326 GLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGA 382
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
L EM P+T+TY+ LI ++ ++ A + ++M G D+ TY +L+D
Sbjct: 383 INKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
+ K+ +D A+ + ++M+ G+ PD TY+++++ L K G L A ++F ++V +G
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
+ TYNIM++ K + AL L +M++ G PD +T+ ++ L G +AE +
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 492 REMMARGLL 500
EM + +
Sbjct: 563 TEMQQKNWI 571
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 1/303 (0%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
GF+ + +Y T++ L R Q A +LL ++ +PN V YN +I S + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
N+F++M PD VTY +L+ G L A ++ M + PD T++ +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
LGK G++ A + M+ QG P+L TYN +MD + A+ + M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+YSI++ L ++EA +F EM+ IPD Y L+D K+G + AW+
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M + G + T NSLL + + + +A L + M G++P + TY +L+ C +G
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Query: 413 RLK 415
R K
Sbjct: 658 RSK 660
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 18/395 (4%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV-----------RRALQFHDDVVAR 112
+PS FS + KG P LT+ + C G + R + +
Sbjct: 270 VPSGFSNSSVEMMKG--PSGTALTS--RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNL 325
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G R++ ++K + G L++ G K + Y T++ +L + K
Sbjct: 326 GLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPG--FKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
L EMV P+ VTYN L++ + L EA + ++M PD +T+ TL+D
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
K G + A ++ M G+ PD FTY+ +++ + A + M +G TPN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ +Y+I++ K + AL L+ +M+ PD +TYS +++ L G + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
EM K D+ Y L+D+ K+ +V+KA + M G++P+V T N L+ +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
++ A E+ Q+++ G +++TY ++++ C +G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D T+ T+V LG+ +L M++ G +P+ TYN L+ Y N +N+A+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
N M + G P+ +Y +I K +D A++++ M+ + PDT TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G + A +L EM ++G + TYN ++D+ K+ + A+ L + M++ G +PD VTY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
+I+M+ L G L+ A+ VF ++ K + Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G P+ T +++ +A +LL+ M+A GL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%)
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D TY +++ Q +LLDEM R P+ +T+N L+ + G+ + EA NV
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M + G KPD TY +L+D + ++ A+ + M G++P+ +YS+II+ L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
+ A LF EM P+ +TY+ ++D K+ +A +L +M N G DK TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
+ +++VL ++++A A+ +M+ + PD Y +L+D K G ++ A + +Q ++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
G V T N +++ + EA LL M G P T+ ++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 132/249 (53%)
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+ G K D TY +++ + +L+ M + G PN +Y+ +IH + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
EA+N+F +M+ PD +TY +LID K+G + A ++ M G D FTY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
+ L K+ H+ A L +M DQG P++VTYNI+MD K +NA ++++D+ G+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
TY+I++ L G +EA A+ +EM+ K IPD + ++ + G+ KA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 491 LREMMARGL 499
+ M+ GL
Sbjct: 597 YQAMLHAGL 605
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 175/388 (45%), Gaps = 64/388 (16%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+FG I +L ++++ G +P+ VT LI + A+ + + G + ++V
Sbjct: 379 QFGAINK---LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y TLI + G ++ + ++++ + P+ Y+ II+ L K + A LF EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 180 VVKKVSPDVVTYNSLL-------------------------------------YGFCIVG 202
V + +P++VTYN ++ G C G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--G 553
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
L+EA + EM +KN PD + LVD GK GNV++A M+ G++P++ T N
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH-----------GLCKNKMVDE 311
SL+ + VN+I +A +L +M G+ P++ +Y++++ G C M
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMAST 673
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
A M +K+ ++ DG +HA +D MH++ + + + ++++D
Sbjct: 674 GHP--AHMFLLKMP------AAGPDG---ENVRNHANNFLDLMHSEDRESKRGLVDAVVD 722
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVV 399
L KS ++A ++ + + + PD +
Sbjct: 723 FLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 127/249 (51%), Gaps = 4/249 (1%)
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA-QRGVTPNVHSYSIIIHGLCKNKMVDE 311
G++ D + N ++ +N+ A+ + Q G + H+Y+ ++ L + K
Sbjct: 326 GLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGA 382
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
L EM P+T+TY+ LI ++ ++ A + ++M G D+ TY +L+D
Sbjct: 383 INKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
+ K+ +D A+ + ++M+ G+ PD TY+++++ L K G L A ++F ++V +G
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
+ TYNIM++ K + AL L +M++ G PD +T+ ++ L G +AE +
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 492 REMMARGLL 500
EM + +
Sbjct: 563 TEMQQKNWI 571
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 194/411 (47%), Gaps = 38/411 (9%)
Query: 95 LKGEVRR---ALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP 151
L G+VR+ A D + +R ++ ++ LI+ R G ++ ++E + P
Sbjct: 160 LSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVP 219
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+ + ++ +I +L + + S+A + F + + PDV+ Y +L+ G+C G++ EA ++
Sbjct: 220 DKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVF 278
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
EM I P+V T++ ++DAL + G + A +V A M+ G P+ T+N+LM +
Sbjct: 279 KEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKA 338
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
K + + N M + G P+ +Y+ +I C+++ ++ A+ + M K + T+
Sbjct: 339 GRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTF 398
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+++ + K ++ A + +M + TYN L+ + S D + + K+M D
Sbjct: 399 NTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDD 458
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+ ++P+V TY +L+ C G NA ++F+++V
Sbjct: 459 KEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV-------------------------- 492
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
E+K P +E ++ L G K E+L+ +M+ +GL+ +
Sbjct: 493 --------EEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVAR 535
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 148/330 (44%), Gaps = 10/330 (3%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI---------LKKGYRPDAVTLTTL 89
A +A+ FNR+ P I F + S S + LK + PD + T L
Sbjct: 202 ASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNL 261
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
++G C GE+ A + ++ G N +Y +I LCR GQ + + +
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
PN + +N ++ K ++++M PD +TYN L+ C L+ A +
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVK 381
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
+L+ M +K + TFNT+ + K+ +V A + + MM+ +P+ TYN LM +
Sbjct: 382 VLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFV 441
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDT 328
+ + + M + V PNV++Y +++ C + A LF EM E + P
Sbjct: 442 GSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSL 501
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
Y ++ L ++G++ ELV++M KG
Sbjct: 502 SLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 127/237 (53%), Gaps = 1/237 (0%)
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
YN ++D V + + A +++ M R V ++ +++I+I + + EA++ F ME
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
+PD I +S +I L + R S A D + ++ +P D Y +L+ C++ +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEP-DVIVYTNLVRGWCRAGEIS 272
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
+A + K+M+ GI+P+V TY+I++D LC+ G++ A +VF D++ G T+N ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
K G ++ L + ++M+ GC PD IT+ +I A + A K+L M+ +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 208/433 (48%), Gaps = 30/433 (6%)
Query: 75 LKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQT 134
L+ GY+ A + + + +C G + + G L+Q L+ L R G+
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143
Query: 135 RASLQLLRQVE--GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF---------------S 177
++L +L +E G + P+V Y++++ +L K + A ++
Sbjct: 144 ESALGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 178 EMVVKKVSPDVVTYNSLLYGFC---IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
+++ P V N LL G + + K E L M R D ++N + G
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKF--DTWSYNICIHGFG 259
Query: 235 KEGNVKEAKNVLAVMMKQG------VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
G++ A ++ M ++ PD+ TYNSL+ CL + A+ + + + G
Sbjct: 260 CWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSG 319
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
P+ +Y I+I G CK+ +D+A+ ++ EM+ +PDTI Y+ L+DG K+ +++ A
Sbjct: 320 HEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC 379
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
+L ++M +G A +TYN L+D L ++ + L ++ +G D +T++I+ L
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
C+EG+L+ A ++ +++ +G+ V + T + ++ G K+G +D L+ + + +P+
Sbjct: 440 CREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNV 499
Query: 469 ITFETIICALFEK 481
+ + + A ++
Sbjct: 500 LRWNAGVEASLKR 512
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 28/407 (6%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G++ + +Y + + +CR G LL ++ V + M ++DSL + A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 173 FNL--FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL-------DEMTRKNIG--- 220
+ + E + ++P V Y+S+L +L+ A +L D + + G
Sbjct: 147 LGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVI 204
Query: 221 -----PDVITFNTLVDALGKEGNVKEAKNVLAVM--MKQGVKPDLFTYNSLMDGYCLVNE 273
P + N L+ L + E K V + MK+ K D ++YN + G+ +
Sbjct: 205 IVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR-FKFDTWSYNICIHGFGCWGD 263
Query: 274 INKAIAILNSMAQRGVT------PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
++ A+++ M +R P++ +Y+ +IH LC +AL ++ E++ PD
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
TY LI G CKS R+ A + EM G D YN LLD K+ V +A L +
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
KM +G++ TYNIL+DGL + GR + +F DL KG V T++I+ LC+EG
Sbjct: 384 KMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+ A+ L+ EME +G D +T +++ ++G EKL++ +
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI 490
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 224/522 (42%), Gaps = 48/522 (9%)
Query: 27 FHSHSLSPSIH------NADDAISIFNRL------LGTSPTPSIIE----------FGQI 64
F + S + IH + D A+S+F + G+S P I FG+
Sbjct: 246 FDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKA 305
Query: 65 PSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTL 124
A V ++ G+ PD T LI+G C + A++ + ++ GF + + Y L
Sbjct: 306 KDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Query: 125 IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV 184
+ G + + + QL ++ V+ + YN +ID L ++ F LF ++ K
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKN 244
D +T++ + C G+L+ A +L++EM + D++T ++L+ K+G +
Sbjct: 426 FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEK 485
Query: 245 VLAVMMKQGVKPDLFTYNSLMDG-----------YCLVNEINKAIAILNSM--------A 285
++ + + + P++ +N+ ++ Y + + + SM +
Sbjct: 486 LMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGAS 545
Query: 286 QRGVTP---NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT---YSSLIDGLC 339
V+P + S S + L + + L A + ++ PD+ ++ +
Sbjct: 546 AEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYL 605
Query: 340 KSGRISHAWELVDEMHNKG-QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
G +S A +L + + G +TYNS++ K + A + +M + D+
Sbjct: 606 SKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADI 665
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
TYN+++ GL K GR A V L +G ++ + YN +IN L K DEA L
Sbjct: 666 ATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDH 725
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
M+ G PD +++ T+I + G +A K L+ M+ G L
Sbjct: 726 MKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCL 767
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 169/382 (44%), Gaps = 22/382 (5%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF----------H 106
S+I G+ SA VL + + G + +++ L K E+R AL H
Sbjct: 136 SLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNH 195
Query: 107 DD-----VVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG-HLVKPNVVMYNTII 160
D V+ + V+ L+ GL R ++ +++G K + YN I
Sbjct: 196 SDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICI 255
Query: 161 DSLCKDKLVSDAFNLFSEMVVKK------VSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
+ A +LF EM + PD+ TYNSL++ C+ G+ K+A + DE+
Sbjct: 256 HGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDEL 315
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEI 274
PD T+ L+ K + +A + M G PD YN L+DG ++
Sbjct: 316 KVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKV 375
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+A + M Q GV + +Y+I+I GL +N + LF +++ D IT+S +
Sbjct: 376 TEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIV 435
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
LC+ G++ A +LV+EM +G D T +SLL K D L K +R+ +
Sbjct: 436 GLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNL 495
Query: 395 QPDVVTYNILMDGLCKEGRLKN 416
P+V+ +N ++ K + K+
Sbjct: 496 VPNVLRWNAGVEASLKRPQSKD 517
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 190/446 (42%), Gaps = 41/446 (9%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ A + G++ G+ PD + L+ G +V A Q + +V G R + +Y
Sbjct: 339 RMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYN 398
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
LI GL R G+ A L ++ + + ++ + LC++ + A L EM +
Sbjct: 399 ILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR 458
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
S D+VT +SLL GF G+ +L+ + N+ P+V+ +N V+A K K+
Sbjct: 459 GFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD- 517
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN-------KAIAILNSMAQRGVTPNVHS 295
K+ + +G D+ + D E++ + ++ +A + P
Sbjct: 518 KDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKP-- 575
Query: 296 YSIIIHGLCKNKMVDE-------------------------ALNLFAEMECIKIIPDT-I 329
+ GL + + V+ A LF + + T
Sbjct: 576 ----LFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSY 631
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+S++ K G A ++D+M AD TYN ++ L K D A A+ ++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
QG D+V YN L++ L K RL A ++F + G + V +YN MI K G
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 450 DEALALLSEMEDKGCIPDAITFETII 475
EA L M D GC+P+ +T +TI+
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT-DTIL 776
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 181/390 (46%), Gaps = 34/390 (8%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+ + F++ + KKG DA+T + + LC +G++ A++ +++ RGF ++ V+
Sbjct: 408 GRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTI 467
Query: 122 GTLIKGLCRMGQTRASLQLLRQV-EGHLVKPNVVMYNTIIDSLCKDKLVSD--------- 171
+L+ G + G+ +L++ + EG+LV PNV+ +N +++ K D
Sbjct: 468 SSLLIGFHKQGRWDWKEKLMKHIREGNLV-PNVLRWNAGVEASLKRPQSKDKDYTPMFPS 526
Query: 172 --AFNLFSEMV--------VKKVSP-DVVTYNSLLYGFCIVGQLKEATEL--LDEMTRKN 218
+F MV ++VSP + ++S Y + Q + L L R
Sbjct: 527 KGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVE 586
Query: 219 IGPD---VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL--FTYNSLMDGYCLVNE 273
PD V NT + +G++ A + + GV DL +TYNS+M +
Sbjct: 587 AKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVT-DLTSYTYNSMMSSFVKKGY 645
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
A +L+ M + ++ +Y++II GL K D A + + D + Y++
Sbjct: 646 FQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNT 705
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
LI+ L K+ R+ A +L D M + G D +YN++++V K+ + +A K M D G
Sbjct: 706 LINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Query: 394 IQPDVVTYNILMDGLCKE---GRLKNAQEV 420
P+ VT IL D L KE R K A V
Sbjct: 766 CLPNHVTDTIL-DYLGKEMEKARFKKASFV 794
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
S ++ G +A VL ++ + D T +I+GL G A D + +G L
Sbjct: 639 SFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYL 698
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ V Y TLI L + + + QL ++ + + P+VV YNT+I+ K + +A+
Sbjct: 699 DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758
Query: 177 SEMVVKKVSPDVVTYNSLLY 196
M+ P+ VT L Y
Sbjct: 759 KAMLDAGCLPNHVTDTILDY 778
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 207/454 (45%), Gaps = 17/454 (3%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
I+ G+ A K++ +G P T ++ G L + AL+F +D+ RG +
Sbjct: 230 ILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPD 289
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
++ T+I G CR + + +L +++G+ + P+VV Y T+I V D +F
Sbjct: 290 DATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFE 349
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP-DVITFNTLVDALGKE 236
EM + P+ TY++LL G C G++ EA +L M K+I P D F L+ + K
Sbjct: 350 EMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKA 409
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV------- 289
G++ A VL M V + Y L++ C + N+AI +L+++ ++ +
Sbjct: 410 GDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDT 469
Query: 290 -TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
+Y+ II LC N +A LF ++ + + D ++LI G K G ++
Sbjct: 470 LEMEPSAYNPIIEYLCNNGQTAKAEVLFRQL-MKRGVQDQDALNNLIRGHAKEGNPDSSY 528
Query: 349 ELVDEMHNKGQPADKFTYNSLL-DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
E++ M +G P + Y L+ + K D AL + D G PD + +++
Sbjct: 529 EILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVED-GHVPDSSLFRSVIES 587
Query: 408 LCKEGRLKNAQEVFQDLVIK--GYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
L ++GR++ A V ++ K G + ++ L G +EAL + + G
Sbjct: 588 LFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHT 647
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
D ++++ L EKG A KLL + R L
Sbjct: 648 AD---LDSLLSVLSEKGKTIAALKLLDFGLERDL 678
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 193/400 (48%), Gaps = 10/400 (2%)
Query: 108 DVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDK 167
D+ +G ++ + LI+ + G + S+++ ++++ V+ + YN++ + +
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFN 227
A F++MV + V P TYN +L+GF + +L+ A ++M + I PD TFN
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
T+++ + + EA+ + M + P + +Y +++ GY V+ ++ + I M
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP-DTITYSSLIDGLCKSGRISH 346
G+ PN +YS ++ GLC + EA N+ M I P D + L+ K+G ++
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA 414
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI--------QPDV 398
A E++ M PA+ Y L++ CK+ ++AI L + ++ I + +
Sbjct: 415 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 474
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
YN +++ LC G+ A+ +F+ L+ +G N +I G KEG D + +L
Sbjct: 475 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKI 533
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
M +G ++ +E +I + KG+ A+ L M+ G
Sbjct: 534 MSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDG 573
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 199/441 (45%), Gaps = 10/441 (2%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
E ++ A +L + +KG D LI+ G V+ +++ + G
Sbjct: 162 EVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIK 221
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
SY +L K + R G+ + + ++ V+P YN ++ + A F +M
Sbjct: 222 SYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM 281
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ +SPD T+N+++ GFC ++ EA +L EM IGP V+++ T++ V
Sbjct: 282 KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS-YSI 298
+ + M G++P+ TY++L+ G C ++ +A IL +M + + P +S +
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLK 401
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM---- 354
++ K + A + M + + + Y LI+ CK+ + A +L+D +
Sbjct: 402 LLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKE 461
Query: 355 ----HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
H + YN +++ LC + KA L +++ +G+Q D N L+ G K
Sbjct: 462 IILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAK 520
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
EG ++ E+ + + +G Y ++I +G +A L M + G +PD+
Sbjct: 521 EGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSL 580
Query: 471 FETIICALFEKGDNYKAEKLL 491
F ++I +LFE G A +++
Sbjct: 581 FRSVIESLFEDGRVQTASRVM 601
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 178/378 (47%), Gaps = 14/378 (3%)
Query: 137 SLQLLRQVE-GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+LQ R E L++ + + +I L + ++ A + +M K V D + L+
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
+ G ++E+ ++ +M + + ++N+L + + G AK M+ +GV+
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVE 252
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P TYN ++ G+ L + A+ M RG++P+ +++ +I+G C+ K +DEA L
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
F EM+ KI P ++Y+++I G R+ + +EM + G + TY++LL LC
Sbjct: 313 FVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD 372
Query: 376 SHHVDKAIALTKKMRDQGIQP-DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ + +A + K M + I P D + L+ K G + A EV + +
Sbjct: 373 AGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAG 432
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCI----------PDAITFETIICALFEKGDN 484
Y ++I CK ++ A+ LL + +K I P A + II L G
Sbjct: 433 HYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQT 490
Query: 485 YKAEKLLREMMARGLLEK 502
KAE L R++M RG+ ++
Sbjct: 491 AKAEVLFRQLMKRGVQDQ 508
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 179/442 (40%), Gaps = 55/442 (12%)
Query: 40 DDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTL 89
D+A +F + G PS++ + ++ + ++ G P+A T +TL
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVS-YGTLIKGLCRMGQTRASLQLLRQVEGHL 148
+ GLC G++ A +++A+ S + L+ + G A+ ++L+ +
Sbjct: 367 LPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLN 426
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV--------SPDVVTYNSLLYGFCI 200
V Y +I++ CK + A L ++ K++ + YN ++ C
Sbjct: 427 VPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCN 486
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
GQ +A L ++ ++ + D N L+ KEGN + +L +M ++GV +
Sbjct: 487 NGQTAKAEVLFRQLMKRGV-QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNA 545
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM- 319
Y L+ Y E A L+SM + G P+ + +I L ++ V A + M
Sbjct: 546 YELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMI 605
Query: 320 -ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD---------------- 362
+ + I + + +++ L G + A +D ++ G AD
Sbjct: 606 DKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIA 665
Query: 363 ---------------KFT-YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
+F+ Y+ +LD L + A ++ K+ ++G D + + L+
Sbjct: 666 ALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIK 725
Query: 407 GLCKEGRLKNAQEVFQDLVIKG 428
L +EG K A +V ++ KG
Sbjct: 726 SLNQEGNTKQA-DVLSRMIKKG 746
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 184/394 (46%), Gaps = 29/394 (7%)
Query: 2 MLSSPRVSMSSFLRLNNF------PVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPT 55
++S+P+ + S R+ P+++K F S P+ ++ + I LG
Sbjct: 40 IVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRY 99
Query: 56 PSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFR 115
++I+ VL K GY T LIK V + + V++ ++
Sbjct: 100 FNLID--------DVLAKHRSSGYPLTGEIFTYLIK-------VYAEAKLPEKVLSTFYK 144
Query: 116 LNQVSYGTLIKGLCRM--------GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDK 167
+ + ++ K L R+ G + + +L + H V PN YN ++ + C +
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFN 227
+S A+ LF +M+ + V PDV +Y L+ GFC GQ+ A ELLD+M K PD +++
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYT 264
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
TL+++L ++ ++EA +L M +G PDL YN+++ G+C + A +L+ M
Sbjct: 265 TLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN 324
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
G +PN SY +I GLC M DE EM P + L+ G C G++ A
Sbjct: 325 GCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
++V+ + G+ T+ ++ ++C +K
Sbjct: 385 CDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 109/193 (56%)
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+ KA + S GV PN SY++++ C N + A LF +M ++PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
LI G C+ G+++ A EL+D+M NKG D+ +Y +LL+ LC+ + +A L +M+ +G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
PD+V YN ++ G C+E R +A++V D++ G +Y +I GLC +G+FDE
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 454 ALLSEMEDKGCIP 466
L EM KG P
Sbjct: 351 KYLEEMISKGFSP 363
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 5/308 (1%)
Query: 173 FNLFSEMVVKKVSPDV-VTYNSLLYGFCIVGQLKEATELLD---EMTRKNIGPDVITFNT 228
FNL +++ K S +T Y + + K ++L +M N P N
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 229 LVDAL-GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
++D L G +++A + GV P+ +YN LM +CL ++++ A + M +R
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
V P+V SY I+I G C+ V+ A+ L +M +PD ++Y++L++ LC+ ++ A
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
++L+ M KG D YN+++ C+ A + M G P+ V+Y L+ G
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
LC +G ++ ++++ KG+ N ++ G C G +EA ++ + G
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 468 AITFETII 475
+ T+E +I
Sbjct: 400 SDTWEMVI 407
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 117/224 (52%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A+ + GK+L++ PD + LI+G C KG+V A++ DD++ +GF +++SY TL+
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
LCR Q R + +LL +++ P++V YNT+I C++ DA + +M+ SP
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ V+Y +L+ G C G E + L+EM K P N LV G V+EA +V+
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 388
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
V+MK G T+ ++ C +E K L + +T
Sbjct: 389 EVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEIT 432
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 147/330 (44%), Gaps = 5/330 (1%)
Query: 101 RALQFHDDVVAR----GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMY 156
R DDV+A+ G+ L + LIK L ++ P
Sbjct: 98 RYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157
Query: 157 NTIIDSLCKDK-LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
N I+D L + + AF LF + V P+ +YN L+ FC+ L A +L +M
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
+++ PDV ++ L+ ++G V A +L M+ +G PD +Y +L++ C ++
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
+A +L M +G P++ Y+ +I G C+ +A + +M P++++Y +LI
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
GLC G + ++EM +KG N L+ C V++A + + + G
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
T+ +++ +C E + + +D V
Sbjct: 398 LHSDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 137/274 (50%), Gaps = 5/274 (1%)
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQG--VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
L+ LG+ +VLA G + ++FTY L+ Y K ++ M +
Sbjct: 90 LILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLE 147
Query: 287 RGVTPNVHSYSIIIHGLCKNK-MVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
TP + I+ L ++ + +A LF ++P+T +Y+ L+ C + +S
Sbjct: 148 FNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLS 207
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
A++L +M + D +Y L+ C+ V+ A+ L M ++G PD ++Y L+
Sbjct: 208 IAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLL 267
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
+ LC++ +L+ A ++ + +KG + + YN MI G C+E +A +L +M GC
Sbjct: 268 NSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCS 327
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
P+++++ T+I L ++G + +K L EM+++G
Sbjct: 328 PNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y +LID + R S + L E+ FTY L+ V ++ +K ++ KM
Sbjct: 99 YFNLIDDVLAKHR-SSGYPLTGEI---------FTY--LIKVYAEAKLPEKVLSTFYKML 146
Query: 391 DQGIQPDVVTYNILMDGLCK-EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ P N ++D L G L+ A E+F+ + G R+YN+++ C
Sbjct: 147 EFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL 206
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
A L +M ++ +PD +++ +I KG A +LL +M+ +G +
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV 257
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 161/306 (52%), Gaps = 7/306 (2%)
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK---EGNVKEAKNVLAVMMKQGVKP 256
I+G+ K+ + + E + G ++T NT+ + + G +EA + + + G++
Sbjct: 130 ILGKAKKW-DRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEK 188
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
+ + N L+D C + +A +L + + +TPN H+++I IHG CK V+EAL
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
EM+ P I+Y+++I C+ +E++ EM G P + TY +++ L
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ-DLVIKGYHVTVRT 435
++A+ + +M+ G +PD + YN L+ L + GRL+ A+ VF+ ++ G + T
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKG-CIPDAITFETIICALFEKGDNYKAEKLLREM 494
YN MI C D+A+ LL EME C PD T++ ++ + F++GD + KLL+EM
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Query: 495 MARGLL 500
+ + L
Sbjct: 428 VTKHHL 433
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 157/339 (46%), Gaps = 4/339 (1%)
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T+ +++ GE A+ D + G N S L+ LC+ + + +L Q+
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
+ H+ PN +N I CK V +A EM P V++Y +++ +C +
Sbjct: 217 KSHIT-PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+ E+L EM P+ IT+ T++ +L + +EA V M + G KPD YN L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 265 MDGYCLVNEINKAIAILN-SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
+ + +A + M + GV+ N +Y+ +I C + D+A+ L EME
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 324 II-PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA-DKFTYNSLLDVLCKSHHVDK 381
+ PD TY L+ K G + +L+ EM K + D+ TY L+ LC+++ +
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEW 455
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
A L ++M Q I P T +L++ + K+ ++A+ +
Sbjct: 456 AYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 12/300 (4%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA----LQFHDDVVARGFRLN 117
G+ A + ++ + G + ++ L+ LC + V +A LQ + N
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP-----N 223
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
++ I G C+ + +L +++++GH +P V+ Y TII C+ + + S
Sbjct: 224 AHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLS 283
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM P+ +TY +++ + +EA + M R PD + +N L+ L + G
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 238 NVKEAKNVLAVMMKQ-GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV-TPNVHS 295
++EA+ V V M + GV + TYNS++ YC +E +KAI +L M + P+VH+
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIP-DTITYSSLIDGLCKSGRISHAWELVDEM 354
Y ++ K V E L EM + D TY+ LI LC++ A+ L +EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 180/401 (44%), Gaps = 53/401 (13%)
Query: 135 RASLQLLRQVE---GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
R++L +L+ E GH K + Y+ +D L K K ++ E V + +VT
Sbjct: 102 RSALGILKWAESCKGH--KHSSDAYDMAVDILGKAK----KWDRMKEFVERMRGDKLVTL 155
Query: 192 NS---LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
N+ ++ F G+ +EA + D + + + + N L+D L KE V++A+ VL +
Sbjct: 156 NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-L 214
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN-- 306
+K + P+ T+N + G+C N + +A+ + M G P V SY+ II C+
Sbjct: 215 QLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 307 ---------------------------------KMVDEALNLFAEMECIKIIPDTITYSS 333
K +EAL + M+ PD++ Y+
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 334 LIDGLCKSGRISHAWELVD-EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
LI L ++GR+ A + EM G + TYNS++ + C DKAI L K+M
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 393 GI-QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV--RTYNIMINGLCKEGLF 449
+ PDV TY L+ K G + ++ +++V K +H+++ TY +I LC+ +
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK-HHLSLDESTYTFLIQRLCRANMC 453
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+ A L EM + P T ++ + +K + AE++
Sbjct: 454 EWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 3/228 (1%)
Query: 272 NEINKAIAILN-SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
++ A+ IL + + +G + +Y + + L K K D M K++ T
Sbjct: 99 DDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLN-T 157
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
+ ++ +G A + D + G + + N LLD LCK V++A + +++
Sbjct: 158 VAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK 217
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
I P+ T+NI + G CK R++ A Q++ G+ V +Y +I C++ F
Sbjct: 218 SH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
+ +LSEME G P++IT+ TI+ +L + + +A ++ M G
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 161/306 (52%), Gaps = 7/306 (2%)
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK---EGNVKEAKNVLAVMMKQGVKP 256
I+G+ K+ + + E + G ++T NT+ + + G +EA + + + G++
Sbjct: 130 ILGKAKKW-DRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEK 188
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
+ + N L+D C + +A +L + + +TPN H+++I IHG CK V+EAL
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
EM+ P I+Y+++I C+ +E++ EM G P + TY +++ L
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ-DLVIKGYHVTVRT 435
++A+ + +M+ G +PD + YN L+ L + GRL+ A+ VF+ ++ G + T
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKG-CIPDAITFETIICALFEKGDNYKAEKLLREM 494
YN MI C D+A+ LL EME C PD T++ ++ + F++GD + KLL+EM
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Query: 495 MARGLL 500
+ + L
Sbjct: 428 VTKHHL 433
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 157/339 (46%), Gaps = 4/339 (1%)
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T+ +++ GE A+ D + G N S L+ LC+ + + +L Q+
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
+ H+ PN +N I CK V +A EM P V++Y +++ +C +
Sbjct: 217 KSHIT-PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+ E+L EM P+ IT+ T++ +L + +EA V M + G KPD YN L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 265 MDGYCLVNEINKAIAILN-SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
+ + +A + M + GV+ N +Y+ +I C + D+A+ L EME
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 324 II-PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA-DKFTYNSLLDVLCKSHHVDK 381
+ PD TY L+ K G + +L+ EM K + D+ TY L+ LC+++ +
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEW 455
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
A L ++M Q I P T +L++ + K+ ++A+ +
Sbjct: 456 AYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 12/300 (4%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA----LQFHDDVVARGFRLN 117
G+ A + ++ + G + ++ L+ LC + V +A LQ + N
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP-----N 223
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
++ I G C+ + +L +++++GH +P V+ Y TII C+ + + S
Sbjct: 224 AHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLS 283
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM P+ +TY +++ + +EA + M R PD + +N L+ L + G
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 238 NVKEAKNVLAVMMKQ-GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV-TPNVHS 295
++EA+ V V M + GV + TYNS++ YC +E +KAI +L M + P+VH+
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIP-DTITYSSLIDGLCKSGRISHAWELVDEM 354
Y ++ K V E L EM + D TY+ LI LC++ A+ L +EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 180/401 (44%), Gaps = 53/401 (13%)
Query: 135 RASLQLLRQVE---GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
R++L +L+ E GH K + Y+ +D L K K ++ E V + +VT
Sbjct: 102 RSALGILKWAESCKGH--KHSSDAYDMAVDILGKAK----KWDRMKEFVERMRGDKLVTL 155
Query: 192 NS---LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
N+ ++ F G+ +EA + D + + + + N L+D L KE V++A+ VL +
Sbjct: 156 NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-L 214
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN-- 306
+K + P+ T+N + G+C N + +A+ + M G P V SY+ II C+
Sbjct: 215 QLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 307 ---------------------------------KMVDEALNLFAEMECIKIIPDTITYSS 333
K +EAL + M+ PD++ Y+
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 334 LIDGLCKSGRISHAWELVD-EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
LI L ++GR+ A + EM G + TYNS++ + C DKAI L K+M
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 393 GI-QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV--RTYNIMINGLCKEGLF 449
+ PDV TY L+ K G + ++ +++V K +H+++ TY +I LC+ +
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK-HHLSLDESTYTFLIQRLCRANMC 453
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+ A L EM + P T ++ + +K + AE++
Sbjct: 454 EWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 3/228 (1%)
Query: 272 NEINKAIAILN-SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
++ A+ IL + + +G + +Y + + L K K D M K++ T
Sbjct: 99 DDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLN-T 157
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
+ ++ +G A + D + G + + N LLD LCK V++A + +++
Sbjct: 158 VAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK 217
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
I P+ T+NI + G CK R++ A Q++ G+ V +Y +I C++ F
Sbjct: 218 SH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
+ +LSEME G P++IT+ TI+ +L + + +A ++ M G
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 193/421 (45%), Gaps = 40/421 (9%)
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQV-EGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
++ Q+S ++ L R + SL LL V E P+V YN ++ ++ + K A
Sbjct: 115 YKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIA 174
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
LF EM + ++PD TY++L+ F G A L +M + + D++ ++ L++
Sbjct: 175 HGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL 234
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
+ + +A ++ + + + G+ PDL YNS+++ Y +A ++ M + GV PN
Sbjct: 235 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIK----------------------------- 323
SYS ++ +N EAL++FAEM+ +
Sbjct: 295 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 354
Query: 324 ------IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
I P+ ++Y++++ ++ A L M K + TYN+++ + K+
Sbjct: 355 SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
+KA L ++M+ +GI+P+ +TY+ ++ K G+L A +FQ L G + Y
Sbjct: 415 EHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQ 474
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
MI + GL A LL E++ +PD I ET I L + G +A + R+
Sbjct: 475 TMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFES 530
Query: 498 G 498
G
Sbjct: 531 G 531
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 235/538 (43%), Gaps = 51/538 (9%)
Query: 9 SMSSFLRLNNFPVVSKPSFHSHS-----LSPSIHNADDAISIFNRLLGTSPTPSIIEF-- 61
+ SSF L + +F H+ L SIH + +F+ L I F
Sbjct: 67 TTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMV 126
Query: 62 ------GQIPSAFSVLGKILKKG-YRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF 114
+ ++L + ++ Y P +++ + + A D++ R
Sbjct: 127 SLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRAL 186
Query: 115 RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIID---SLCKDKLVSD 171
++ +Y TLI + G ++L L+++E V ++V+Y+ +I+ LC S
Sbjct: 187 APDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD---YSK 243
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A ++FS + ++PD+V YNS++ + +EA L+ EM + P+ ++++TL+
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ EA +V A M + DL T N ++D Y ++ + +A + S+ + + P
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
NV SY+ I+ + ++ EA++LF M+ I + +TY+++I K+ A LV
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG---- 407
EM ++G + TY++++ + K+ +D+A L +K+R G++ D V Y ++
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Query: 408 ---------------------------LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
L K GR + A VF+ G + + MI
Sbjct: 484 GLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMI 543
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
N + + + + +M G PD+ ++ A ++ + KA+ + REM G
Sbjct: 544 NLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 225/523 (43%), Gaps = 76/523 (14%)
Query: 55 TPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ 104
TPS+ + Q A + ++ ++ PD T +TLI +G AL
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
+ + + V Y LI+ R+ ++ + +++ + P++V YN++I+
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
K KL +A L EM V P+ V+Y++LL + + EA + EM N D+
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
T N ++D G+ VKEA + + K ++P++ +YN+++ Y +AI + M
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
++ + NV +Y+ +I K ++A NL EM+ I P+ ITYS++I K+G++
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLL-------------------------------DVL 373
A L ++ + G D+ Y +++ +L
Sbjct: 452 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITIL 511
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
K+ ++A + ++ + G D+ + +++ + R N EVF+ + GY
Sbjct: 512 AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS 571
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCI-PDAITFET------------------- 473
+++N K+ F++A + EM+++GC+ PD + F+
Sbjct: 572 NVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQR 631
Query: 474 --------------IICALFEKGDNYK-AEKLLREMMARGLLE 501
++ AL+E+ D A +++ M RG+L+
Sbjct: 632 LESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILK 674
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 163/317 (51%)
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
K +P V YN +L Q A L DEM ++ + PD T++TL+ + GKEG A
Sbjct: 150 KYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSA 209
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ L M + V DL Y++L++ + + +KAI+I + + + G+TP++ +Y+ +I+
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
K K+ EA L EM ++P+T++YS+L+ ++ + A + EM D
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
T N ++DV + V +A L +R I+P+VV+YN ++ + A +F+
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
+ K V TYN MI K ++A L+ EM+ +G P+AIT+ TII + G
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 483 DNYKAEKLLREMMARGL 499
+A L +++ + G+
Sbjct: 450 KLDRAATLFQKLRSSGV 466
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 169/352 (48%), Gaps = 2/352 (0%)
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
+GF + +Y +++ L + Q + +L ++ G + + + + K
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A +F M K V T N LL KEA L D++ ++ P+++T+ L++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLN 306
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ N+ EA + M+ QG+KPD+ +N +++G + + AI + + M +G P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
NV SY+I+I CK ++ A+ F +M + PD Y+ LI G ++ +EL+
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
EM KG P D TYN+L+ ++ + A + KM I+P + T+N++M
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
+ + V+++++ KG +Y ++I GL EG EA L EM DKG
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 171/344 (49%), Gaps = 2/344 (0%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
YN+++ L K + ++ EM K + + T+ + F + K+A + + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
+ V T N L+D+LG+ KEA+ VL +K+ P++ TY L++G+C V +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
+A I N M +G+ P++ ++++++ GL +++ +A+ LF M+ P+ +Y+ +I
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
CK + A E D+M + G D Y L+ +D L K+M+++G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
PD TYN L+ + + ++A ++ ++ ++ T+N+++ ++ A+
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV 495
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EM KG PD ++ +I L +G + +A + L EM+ +G+
Sbjct: 496 WEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 179/363 (49%), Gaps = 4/363 (1%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
++G+ D+ T +++ L + + +++ +G L ++ +K + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 246
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
++ + ++ + K V N ++DSL + KL +A LF ++ ++ +P+++TY LL
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLL 305
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
G+C V L EA + ++M + + PD++ N +++ L + +A + VM +G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P++ +Y ++ +C + + AI + M G+ P+ Y+ +I G K +D L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLC 374
EM+ PD TY++LI + HA + ++M N+ +P+ T+N ++
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH-TFNMIMKSYF 484
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ + + A+ ++M +GI PD +Y +L+ GL EG+ + A ++++ KG +
Sbjct: 485 MARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLI 544
Query: 435 TYN 437
YN
Sbjct: 545 DYN 547
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 4/296 (1%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
VL LK+ + P+ +T T L+ G C + A + +D++ +G + + V++ +++GL
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLL 344
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
R + +++L ++ PNV Y +I CK + A F +MV + PD
Sbjct: 345 RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
Y L+ GF +L ELL EM K PD T+N L+ + + + A + M
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM 464
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
++ ++P + T+N +M Y + A+ M ++G+ P+ +SY+++I GL
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
EA EM + I Y+ + G+ E+ +E+ + + + KF
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSGKFA 576
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 180/413 (43%), Gaps = 11/413 (2%)
Query: 16 LNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKIL 75
L F KP+F + +N ++ + + Q + SVL ++
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSI-----LAKTRQFETMVSVLEEMG 222
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
KG T T +K E ++A+ + + F++ + L+ L R +
Sbjct: 223 TKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGK 281
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+ L +++ PN++ Y +++ C+ + + +A ++++M+ + + PD+V +N +L
Sbjct: 282 EAQVLFDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
G + +A +L M K P+V ++ ++ K+ +++ A M+ G++
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
PD Y L+ G+ +++ +L M ++G P+ +Y+ +I + KM + A +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
+ +M +I P T++ ++ + + +EM KG D +Y L+ L
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
+A ++M D+G++ ++ YN + G+ E+F++L +
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFEELAQRA 569
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 159/313 (50%), Gaps = 4/313 (1%)
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
V +Y+ L+ F G+ K L+DEM + TFN L+ + G+ G K+A V+
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQA--VVQ 206
Query: 248 VMMKQ--GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M + +P +YN++++ V + + M + G +P+V +Y+I++ +
Sbjct: 207 FMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYR 266
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+D LF EM PD+ TY+ L+ L K + A ++ M G
Sbjct: 267 LGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLH 326
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
Y +L+D L ++ +++ +M G +PDVV Y +++ G G L A+E+F+++
Sbjct: 327 YTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT 386
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY 485
+KG V TYN MI GLC G F EA LL EME +GC P+ + + T++ L + G
Sbjct: 387 VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLS 446
Query: 486 KAEKLLREMMARG 498
+A K++REM+ +G
Sbjct: 447 EARKVIREMVKKG 459
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 150/318 (47%)
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
FR SY L+K G+ +A +L+ ++ +N +I S + L A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
F + P +YN++L V Q K + +M PDV+T+N L+
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
+ G + + M + G PD +TYN L+ N+ A+ LN M + G+ P+V
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
Y+ +I GL + ++ EM PD + Y+ +I G SG + A E+ E
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M KGQ + FTYNS++ LC + +A L K+M +G P+ V Y+ L+ L K G+
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 444
Query: 414 LKNAQEVFQDLVIKGYHV 431
L A++V +++V KG++V
Sbjct: 445 LSEARKVIREMVKKGHYV 462
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 121/245 (49%), Gaps = 9/245 (3%)
Query: 44 SIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRAL 103
+I N LLG +IE+ V ++L+ G+ PD +T L+ G++ R
Sbjct: 224 AILNSLLGVKQY-KLIEW--------VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
+ D++ GF + +Y L+ L + + A+L L ++ + P+V+ Y T+ID L
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
+ + EMV PDVV Y ++ G+ + G+L +A E+ EMT K P+V
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
T+N+++ L G +EA +L M +G P+ Y++L+ ++++A ++
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 284 MAQRG 288
M ++G
Sbjct: 455 MVKKG 459
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 4/257 (1%)
Query: 79 YRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASL 138
YRP + ++ L + + + ++ GF + ++Y L+ R+G+
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+L ++ P+ YN ++ L K A + M + P V+ Y +L+ G
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
G L+ LDEM + PDV+ + ++ G + +AK + M +G P++
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
FTYNS++ G C+ E +A +L M RG PN YS ++ L K + EA + E
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 319 M----ECIKIIPDTITY 331
M + ++P + Y
Sbjct: 455 MVKKGHYVHLVPKMMKY 471
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 204/459 (44%), Gaps = 22/459 (4%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFH--------------- 106
G + A + + ++ + PD VT+ T+++ GE RA +F
Sbjct: 194 GLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSI 253
Query: 107 DDVVARGFRLNQVSYGTLIK-GLCRMGQT---RASLQLLRQVEGHLVKPNVV-MYNTIID 161
DD G + V+ + L ++G SL + KP + +NT+ID
Sbjct: 254 DDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLID 313
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
K ++DA NLFSEM+ V D VT+N++++ G L EA LL +M K I P
Sbjct: 314 LYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISP 373
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D T+N L+ G+++ A + K G+ PD T+ +++ C + + A++
Sbjct: 374 DTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVI 433
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
M + + + HS +I+ +V +A LF + ++ T T +++ID +
Sbjct: 434 AEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLAAVIDVYAEK 492
Query: 342 GRISHAWELVDEMHN-KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVT 400
G A + N GQ D YN ++ K+ +KA++L K M++QG PD T
Sbjct: 493 GLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECT 552
Query: 401 YNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME 460
YN L L + AQ + +++ G +TY MI + GL +A+ L ME
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 461 DKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G P+ + + ++I E G +A + R M G+
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/532 (23%), Positives = 225/532 (42%), Gaps = 50/532 (9%)
Query: 5 SPRVSMSSFLRLNNFPVVSK----PSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIE 60
SP V++ FL + F V ++ S H S S S S FN L+
Sbjct: 264 SP-VNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKA---- 318
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS 120
G++ A ++ ++LK G D VT T+I G + A + +G + +
Sbjct: 319 -GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKT 377
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
Y L+ G A+L+ R++ + P+ V + ++ LC+ K+V++ + +EM
Sbjct: 378 YNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD 437
Query: 181 VKKVSPD----------------VVTYNSLLYGF---CIVGQLKEATELLDEMTRKNIG- 220
+ D VV +L F C++ A ++D K +
Sbjct: 438 RNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA-VIDVYAEKGLWV 496
Query: 221 ----------------PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
DV+ +N ++ A GK ++A ++ M QG PD TYNSL
Sbjct: 497 EAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSL 556
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
V+ +++A IL M G P +Y+ +I + ++ +A++L+ ME +
Sbjct: 557 FQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGV 616
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
P+ + Y SLI+G +SG + A + M G ++ SL+ K +++A
Sbjct: 617 KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARR 676
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKE-GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
+ KM+D PDV N ++ LC + G + A+ +F L KG V ++ M+
Sbjct: 677 VYDKMKDSEGGPDVAASNSMLS-LCADLGIVSEAESIFNALREKG-TCDVISFATMMYLY 734
Query: 444 CKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
G+ DEA+ + EM + G + D +F ++ G + +L EM+
Sbjct: 735 KGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 172/394 (43%), Gaps = 35/394 (8%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A S+ + +G PD T +L + L V A + +++ G + +Y +I
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
R+G ++ L +E VKPN V+Y ++I+ + +V +A F M V
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ + SL+ + VG L+EA + D+M GPDV N+++ G V EA+++
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
+ ++G D+ ++ ++M Y + +++AI + M + G+ + S++ ++ +
Sbjct: 714 NALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAAD 772
Query: 307 KMVDEALNLFAEMEC-IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP----- 360
+ E LF EM K++ D T+ +L L K G S A + +N+ +P
Sbjct: 773 GQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPA 832
Query: 361 ----------------------------ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
+ F YN+++ S +D A+ +M+++
Sbjct: 833 ITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEK 892
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
G++PD+VT L+ K G ++ + V L
Sbjct: 893 GLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTF 926
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 186/431 (43%), Gaps = 37/431 (8%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G I +A KI K G PD VT ++ LC + V ++ R+++ S
Sbjct: 389 GDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSV 448
Query: 122 GTLIKGLCRMG---QTRASLQLLR----------------------QVEGHLV------- 149
+++ G Q +A + + VE V
Sbjct: 449 PVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNM 508
Query: 150 ---KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
+ +V+ YN +I + K KL A +LF M + PD TYNSL V + E
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A +L EM P T+ ++ + + G + +A ++ M K GVKP+ Y SL++
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G+ + +AI M + GV N + +I K ++EA ++ +M+ + P
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
D +S++ G +S A + + + KG D ++ +++ + +D+AI +
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI-KGYHVTVRTYNIMINGLCK 445
++MR+ G+ D ++N +M +G+L E+F ++++ + + T+ + L K
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKK 807
Query: 446 EGLFDEALALL 456
G+ EA++ L
Sbjct: 808 GGVPSEAVSQL 818
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 189/431 (43%), Gaps = 5/431 (1%)
Query: 72 GKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM 131
GK G R D + +IK +AL + +G ++ +Y +L + L +
Sbjct: 504 GKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGV 563
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
+ ++L ++ KP Y +I S + L+SDA +L+ M V P+ V Y
Sbjct: 564 DLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVY 623
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
SL+ GF G ++EA + M + + I +L+ A K G ++EA+ V M
Sbjct: 624 GSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
PD+ NS++ + +++A +I N++ ++G T +V S++ +++ M+DE
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDE 742
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH-NKGQPADKFTYNSLL 370
A+ + EM ++ D +++ ++ G++S EL EM + D T+ +L
Sbjct: 743 AIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLF 802
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
+L K +A++ + ++ +P + T I G A E Q+L
Sbjct: 803 TLLKKGGVPSEAVSQLQTAYNEA-KP-LATPAITATLFSAMGLYAYALESCQELTSGEIP 860
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
YN +I G D AL M++KG PD +T + + ++ K + K
Sbjct: 861 REHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT-QAYLVGIYGKAGMVEGVKR 919
Query: 491 LREMMARGLLE 501
+ + G LE
Sbjct: 920 VHSRLTFGELE 930
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 30/300 (10%)
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
P+V+ YN +L G+ E EM + P T+ LVD GK G VKEA
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
+ M ++ PD T +++ + E ++A V ++ S I K
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS----IDDFPK 258
Query: 306 NKMVDEALNL--FAEMECIKIIPD----------------------TITYSSLIDGLCKS 341
N +NL F ME K+ T T+++LID K+
Sbjct: 259 NGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKA 318
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH-HVDKAIALTKKMRDQGIQPDVVT 400
GR++ A L EM G P D T+N+++ C +H H+ +A +L KKM ++GI PD T
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHT-CGTHGHLSEAESLLKKMEEKGISPDTKT 377
Query: 401 YNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME 460
YNIL+ G ++ A E ++ + G T+ +++ LC+ + E A+++EM+
Sbjct: 378 YNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD 437
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 183/459 (39%), Gaps = 93/459 (20%)
Query: 133 QTRAS--LQLLRQVEGHLVK-PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
QTR L++ R + H PNV+ YN ++ +L + + + EM V P
Sbjct: 122 QTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNN 181
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA------- 242
TY L+ + G +KEA + M ++ PD +T T+V G A
Sbjct: 182 TYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGW 241
Query: 243 ----------------KNVLA---VMMKQGVKPDLF------------------------ 259
KN A V +KQ + +LF
Sbjct: 242 CAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRK 301
Query: 260 -----TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALN 314
T+N+L+D Y +N A + + M + GV + +++ +IH + + EA +
Sbjct: 302 PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAES 361
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC 374
L +ME I PDT TY+ L+ +G I A E ++ G D T+ ++L +LC
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ----DLVI---- 426
+ V + A+ +M I+ D + ++M EG + A+ +F+ D V+
Sbjct: 422 QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT 481
Query: 427 ----------KGYHVTVRT-----------------YNIMINGLCKEGLFDEALALLSEM 459
KG V T YN+MI K L ++AL+L M
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
+++G PD T+ ++ L +A+++L EM+ G
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG 580
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 166/397 (41%), Gaps = 35/397 (8%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ A +L ++L G +P T +I G + A+ ++ + G + N+V YG+
Sbjct: 566 VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
LI G G ++Q R +E H V+ N ++ ++I + K + +A ++ +M +
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
PDV NS+L +G + EA + + + K DVI+F T++ G + EA
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAI 744
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM-AQRGVTPNVHSYSIIIHG 302
V M + G+ D ++N +M Y ++++ + + M +R + + ++ +
Sbjct: 745 EVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTL 804
Query: 303 LCKNKMVDEALN--------------------LFAEM--------ECIKI----IP-DTI 329
L K + EA++ LF+ M C ++ IP +
Sbjct: 805 LKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHF 864
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
Y+++I SG I A + M KG D T L+ + K+ V+ + ++
Sbjct: 865 AYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
++P + + D R A V +++ I
Sbjct: 925 TFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEMSI 961
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 31 SLSPSIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYR 80
SL + +A SIFN L T +I F G + A V ++ + G
Sbjct: 698 SLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL 756
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQ-FHDDVVARGFRLNQVSYGTLIKGLCRMG---QTRA 136
D + ++ G++ + FH+ +V R L+ ++ TL L + G + +
Sbjct: 757 SDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
LQ L P + T+ ++ L + A E+ ++ + YN+++Y
Sbjct: 817 QLQTAYNEAKPLATPAITA--TLFSAM---GLYAYALESCQELTSGEIPREHFAYNAVIY 871
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
+ G + A + M K + PD++T LV GK G V+ K V + + ++P
Sbjct: 872 TYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEP 931
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMA 285
+ ++ D Y N + A + M+
Sbjct: 932 SQSLFKAVRDAYVSANRQDLADVVKKEMS 960
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 171/341 (50%), Gaps = 15/341 (4%)
Query: 83 AVTLTTLIKGLCLKGEVR---RALQF---HDDVV--ARGFRLNQVSYGTLIKGLCRMGQT 134
A T LI+ G V+ RA +F ++ V A RL +V L+ LC+ G
Sbjct: 173 ADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEV----LLDALCKEGHV 228
Query: 135 RASLQLLRQVEGHLVK---PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
R + L ++ G + P+V ++N +++ + + + A L+ EM V P VVTY
Sbjct: 229 REASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTY 288
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
+L+ G+C + +++ A E+L+EM + + + FN ++D LG+ G + EA ++
Sbjct: 289 GTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFV 348
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
P + TYNSL+ +C ++ A IL M RGV P +Y+ K+ +E
Sbjct: 349 CESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEE 408
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
+NL+ ++ PD +TY ++ LC+ G++S A ++ EM N+G D T L+
Sbjct: 409 GMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIH 468
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
+LC+ +++A +GI P +T+ ++ +GL +G
Sbjct: 469 LLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 186/392 (47%), Gaps = 18/392 (4%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLL----RQVEGHLVKPNVVMYNT---IIDSLCK 165
GF L+ + +++ LC+ + + L+ R EG N+V +T +I +
Sbjct: 130 GFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGS----NLVSADTFIVLIRRYAR 185
Query: 166 DKLVSDAFNLF----SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM---TRKN 218
+V A F S V K + ++ LL C G ++EA+ L+ + N
Sbjct: 186 AGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSN 245
Query: 219 IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAI 278
P V FN L++ + +K+A+ + M VKP + TY +L++GYC + + A+
Sbjct: 246 WVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAM 305
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
+L M + N ++ II GL + + EAL + + P +TY+SL+
Sbjct: 306 EVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
CK+G + A +++ M +G TYN K + ++ + L K+ + G PD
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
+TY++++ LC++G+L A +V +++ +G + T ++I+ LC+ + +EA
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+G IP ITF+ I L KG + A++L
Sbjct: 486 AVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 153/306 (50%), Gaps = 7/306 (2%)
Query: 71 LGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCR 130
+G + + P L+ G ++++A + +++ A + V+YGTLI+G CR
Sbjct: 238 IGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCR 297
Query: 131 MGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVT 190
M + + ++++L +++ ++ N +++N IID L + +S+A + V + P +VT
Sbjct: 298 MRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVT 357
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
YNSL+ FC G L A+++L M + + P T+N K +E N+ ++
Sbjct: 358 YNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI 417
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+ G PD TY+ ++ C +++ A+ + M RG+ P++ + +++IH LC+ +M++
Sbjct: 418 EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLE 477
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM----HNKGQPADKFTY 366
EA F IIP IT+ + +GL G A L M H+K P TY
Sbjct: 478 EAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPN---TY 534
Query: 367 NSLLDV 372
+D
Sbjct: 535 REAVDA 540
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 176/364 (48%), Gaps = 17/364 (4%)
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK-KVSPDVVTYNSLLYGFCIVGQLKEA 207
++P+V + + + D L ++ + ++EM +SP + ++S++ C + + A
Sbjct: 97 IEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSL--FDSVVNSLCKAREFEIA 154
Query: 208 TELLDEMTRKNIGPDVI---TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP------DL 258
L+ + R + G +++ TF L+ + G V++A + A + +P +L
Sbjct: 155 WSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQA--IRAFEFARSYEPVCKSATEL 212
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMA---QRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
L+D C + +A L + P+V ++I+++G +++ + +A L
Sbjct: 213 RLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKL 272
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
+ EM+ + + P +TY +LI+G C+ R+ A E+++EM + +N ++D L +
Sbjct: 273 WEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGE 332
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
+ + +A+ + ++ P +VTYN L+ CK G L A ++ + ++ +G T T
Sbjct: 333 AGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTT 392
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
YN K +E + L ++ + G PD +T+ I+ L E G A ++ +EM
Sbjct: 393 YNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMK 452
Query: 496 ARGL 499
RG+
Sbjct: 453 NRGI 456
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 4/192 (2%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
E G++ A ++ + P VT +L+K C G++ A + ++ RG
Sbjct: 332 EAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTT 391
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQV--EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
+Y K + +T + L ++ GH P+ + Y+ I+ LC+D +S A +
Sbjct: 392 TYNHFFKYFSKHNKTEEGMNLYFKLIEAGH--SPDRLTYHLILKMLCEDGKLSLAMQVNK 449
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
EM + + PD++T L++ C + L+EA E D R+ I P ITF + + L +G
Sbjct: 450 EMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Query: 238 NVKEAKNVLAVM 249
AK + ++M
Sbjct: 510 MSDMAKRLSSLM 521
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+A+ + R P+I+ + G +P A +L ++ +G P T
Sbjct: 338 EALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFF 397
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
K + + + ++ G ++++Y ++K LC G+ ++Q+ ++++ +
Sbjct: 398 KYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGID 457
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVG---QLKEA 207
P+++ +I LC+ +++ +AF F V + + P +T+ + G G K
Sbjct: 458 PDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Query: 208 TELLDEMTRKNIGPDVITFNTLVDA 232
+ L+ + P+ T+ VDA
Sbjct: 518 SSLMSSLPHSKKLPN--TYREAVDA 540
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 214/484 (44%), Gaps = 34/484 (7%)
Query: 18 NFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKK 77
+P V PS S L N A+ +F P+ +G S ++ + IL K
Sbjct: 5 RWPRVLTPSLLSQILKKQ-KNPVTALKLFEEAKERFPS-----YGHNGSVYATMIDILGK 58
Query: 78 GYR------------------PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
R D+V ++I+ G + A+ + +
Sbjct: 59 SNRVLEMKYVIERMKEDSCECKDSV-FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSL 117
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQ-VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
S+ TL++ + + + A+ + R+ G V + N ++ LC+ A +F E
Sbjct: 118 SFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQE 177
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM----TRKNIGPDVITFNTLVDALG 234
M + PD +Y L+ GFC+ G+L+EAT LL M ++K G D++ + L+DAL
Sbjct: 178 MNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALC 237
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE--INKAIAILNSMAQRGVTPN 292
G V +A +L ++++G+K Y+ + G+ + I + +L RG P
Sbjct: 238 DAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPC 297
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ SYS + L + + E + M P Y + + LC++G++ A +++
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVIN 357
Query: 353 EMHNKGQPADKF-TYNSLLDVLCKSHHVDKAIALTKKMRDQ-GIQPDVVTYNILMDGLCK 410
+ +G YN L+ LC +A+ KKM Q + TY L+DGLC+
Sbjct: 358 KEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
+G+ A +V ++++IK + V TY++MI GLC EA+ L EM + +P++
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSV 477
Query: 471 FETI 474
++ +
Sbjct: 478 WKAL 481
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 183/389 (47%), Gaps = 9/389 (2%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+ ++I+ R G+ ++ L + + + ++T++ + K+ + A ++F +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 181 V-KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+V+ + N L+ C V + A+++ EM + PD ++ L+ EG +
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 240 KEAKNVLAVMM----KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
+EA ++L M ++G D+ Y L+D C E++ AI IL + ++G+
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 296 YSIII--HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
Y I H ++ ++ L E IP +YS++ L + G++ E++
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG-IQPDVVTYNILMDGLCKEG 412
M +KG F Y + + LC++ + +A+++ K QG P V YN+L+ GLC +G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 413 RLKNAQEVFQDLVIKGYHVT-VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
+ A + + + V TY +++GLC++G F EA ++ EM K P T+
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 472 ETIICALFEKGDNYKAEKLLREMMARGLL 500
+I L + Y+A L EM+++ ++
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 177/389 (45%), Gaps = 19/389 (4%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQI------PSAFSVLGKILKK---GYRPDA--VTLTT 88
+DAIS+F L + + F + S I +K G+ ++ L
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
L+K LC A Q ++ +G ++ SY L+KG C G+ + LL + +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 149 VK----PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ- 203
+ ++V+Y ++D+LC V DA + +++ K + Y+ + G
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE 277
Query: 204 -LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
++ LL E + P + +++ + L +EG + E + VL M +G +P F Y
Sbjct: 278 GIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYG 337
Query: 263 SLMDGYCLVNEINKAIAILN-SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-E 320
+ + C ++ +A++++N M Q P V Y+++I GLC + EA+ +M +
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
+ + + TY +L+DGLC+ G+ A ++++EM K TY+ ++ LC
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRY 457
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLC 409
+A+ ++M Q + P+ + L + +C
Sbjct: 458 EAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 167/390 (42%), Gaps = 44/390 (11%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
N +Y T+ID L K V + + M + S++ F G+L++A L
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL-AVMMKQGVKPDLFTYNSLMDGYCL 270
+ N ++F+TL+ + KE ++ A ++ V + N LM C
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL----FAEMECIKIIP 326
VN + A + M +G P+ SY I++ G C ++EA +L F +
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS------------------ 368
D + Y L+D LC +G + A E++ ++ KG A K Y+
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 369 -LLDVL------CKSHHVDKAIALTKK------------MRDQGIQPDVVTYNILMDGLC 409
L + L C + A L ++ MR +G +P Y + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 410 KEGRLKNAQEVFQDLVIKGYHV-TVRTYNIMINGLCKEGLFDEALALLSEMEDK-GCIPD 467
+ G+LK A V +++G+ + TV YN++I GLC +G EA+ L +M + C+ +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 468 AITFETIICALFEKGDNYKAEKLLREMMAR 497
T++T++ L G +A +++ EM+ +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIK 434
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 139/303 (45%), Gaps = 11/303 (3%)
Query: 207 ATELLDEMTRK--NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
A +L +E + + G + + T++D LGK V E K V+ M + + + S+
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+ + + AI++ S+ + S+ ++ + K ++ A ++F +
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 325 IPDTITYSSLI-DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
+ IT +L+ LC+ R A ++ EM+ +G D+ +Y L+ C +++A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 384 ALTKKM----RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
L M +G D+V Y IL+D LC G + +A E+ ++ KG R Y+ +
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 440 INGLCK---EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
G + EG+ + LL+E +G IP ++ + LFE+G + E++L M +
Sbjct: 268 EAGHWESSSEGI-ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRS 326
Query: 497 RGL 499
+G
Sbjct: 327 KGF 329
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 214/484 (44%), Gaps = 34/484 (7%)
Query: 18 NFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKK 77
+P V PS S L N A+ +F P+ +G S ++ + IL K
Sbjct: 5 RWPRVLTPSLLSQILKKQ-KNPVTALKLFEEAKERFPS-----YGHNGSVYATMIDILGK 58
Query: 78 GYR------------------PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
R D+V ++I+ G + A+ + +
Sbjct: 59 SNRVLEMKYVIERMKEDSCECKDSV-FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSL 117
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQ-VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
S+ TL++ + + + A+ + R+ G V + N ++ LC+ A +F E
Sbjct: 118 SFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQE 177
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM----TRKNIGPDVITFNTLVDALG 234
M + PD +Y L+ GFC+ G+L+EAT LL M ++K G D++ + L+DAL
Sbjct: 178 MNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALC 237
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE--INKAIAILNSMAQRGVTPN 292
G V +A +L ++++G+K Y+ + G+ + I + +L RG P
Sbjct: 238 DAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPC 297
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ SYS + L + + E + M P Y + + LC++G++ A +++
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVIN 357
Query: 353 EMHNKGQPADKF-TYNSLLDVLCKSHHVDKAIALTKKMRDQ-GIQPDVVTYNILMDGLCK 410
+ +G YN L+ LC +A+ KKM Q + TY L+DGLC+
Sbjct: 358 KEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
+G+ A +V ++++IK + V TY++MI GLC EA+ L EM + +P++
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSV 477
Query: 471 FETI 474
++ +
Sbjct: 478 WKAL 481
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 183/389 (47%), Gaps = 9/389 (2%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
+ ++I+ R G+ ++ L + + + ++T++ + K+ + A ++F +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 181 V-KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+V+ + N L+ C V + A+++ EM + PD ++ L+ EG +
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 240 KEAKNVLAVMM----KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
+EA ++L M ++G D+ Y L+D C E++ AI IL + ++G+
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 296 YSIII--HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
Y I H ++ ++ L E IP +YS++ L + G++ E++
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG-IQPDVVTYNILMDGLCKEG 412
M +KG F Y + + LC++ + +A+++ K QG P V YN+L+ GLC +G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 413 RLKNAQEVFQDLVIKGYHVT-VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
+ A + + + V TY +++GLC++G F EA ++ EM K P T+
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 472 ETIICALFEKGDNYKAEKLLREMMARGLL 500
+I L + Y+A L EM+++ ++
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 177/389 (45%), Gaps = 19/389 (4%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQI------PSAFSVLGKILKK---GYRPDA--VTLTT 88
+DAIS+F L + + F + S I +K G+ ++ L
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
L+K LC A Q ++ +G ++ SY L+KG C G+ + LL + +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 149 VK----PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ- 203
+ ++V+Y ++D+LC V DA + +++ K + Y+ + G
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE 277
Query: 204 -LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
++ LL E + P + +++ + L +EG + E + VL M +G +P F Y
Sbjct: 278 GIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYG 337
Query: 263 SLMDGYCLVNEINKAIAILN-SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-E 320
+ + C ++ +A++++N M Q P V Y+++I GLC + EA+ +M +
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
+ + + TY +L+DGLC+ G+ A ++++EM K TY+ ++ LC
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRY 457
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLC 409
+A+ ++M Q + P+ + L + +C
Sbjct: 458 EAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 167/390 (42%), Gaps = 44/390 (11%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
N +Y T+ID L K V + + M + S++ F G+L++A L
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL-AVMMKQGVKPDLFTYNSLMDGYCL 270
+ N ++F+TL+ + KE ++ A ++ V + N LM C
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL----FAEMECIKIIP 326
VN + A + M +G P+ SY I++ G C ++EA +L F +
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS------------------ 368
D + Y L+D LC +G + A E++ ++ KG A K Y+
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 369 -LLDVL------CKSHHVDKAIALTKK------------MRDQGIQPDVVTYNILMDGLC 409
L + L C + A L ++ MR +G +P Y + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 410 KEGRLKNAQEVFQDLVIKGYHV-TVRTYNIMINGLCKEGLFDEALALLSEMEDK-GCIPD 467
+ G+LK A V +++G+ + TV YN++I GLC +G EA+ L +M + C+ +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 468 AITFETIICALFEKGDNYKAEKLLREMMAR 497
T++T++ L G +A +++ EM+ +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIK 434
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 139/303 (45%), Gaps = 11/303 (3%)
Query: 207 ATELLDEMTRK--NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
A +L +E + + G + + T++D LGK V E K V+ M + + + S+
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
+ + + AI++ S+ + S+ ++ + K ++ A ++F +
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 325 IPDTITYSSLI-DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
+ IT +L+ LC+ R A ++ EM+ +G D+ +Y L+ C +++A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 384 ALTKKM----RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
L M +G D+V Y IL+D LC G + +A E+ ++ KG R Y+ +
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 440 INGLCK---EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
G + EG+ + LL+E +G IP ++ + LFE+G + E++L M +
Sbjct: 268 EAGHWESSSEGI-ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRS 326
Query: 497 RGL 499
+G
Sbjct: 327 KGF 329
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 1/301 (0%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
GF+ + +Y T++ L R Q +LL ++ KPN V YN +I S + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
N+F++M PD VTY +L+ G L A ++ M + PD T++ +++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
LGK G++ A + M+ QG P+L T+N ++ + A+ + M G P+
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+YSI++ L ++EA +FAEM+ +PD Y L+D K+G + AW+
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M G + T NSLL + H + +A L + M G+ P + TY +L+ C +
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCTDA 652
Query: 413 R 413
R
Sbjct: 653 R 653
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 162/329 (49%), Gaps = 2/329 (0%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
GFR++ ++K + L++ G K + Y T++ +L + K +
Sbjct: 321 GFRMDAYQANQVLKQMDNYANALGFFYWLKRQPG--FKHDGHTYTTMVGNLGRAKQFGEI 378
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
L EMV P+ VTYN L++ + LKEA + ++M PD +T+ TL+D
Sbjct: 379 NKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDI 438
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
K G + A ++ M + G+ PD FTY+ +++ + A + M +G TPN
Sbjct: 439 HAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ +++I+I K + + AL L+ +M+ PD +TYS +++ L G + A +
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
EM K D+ Y L+D+ K+ +VDKA + M G++P+V T N L+ +
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
R+ A + Q ++ G H +++TY ++++
Sbjct: 619 RMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 142/278 (51%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D T+ T+V LG+ E +L M++ G KP+ TYN L+ Y N + +A+ +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
N M + G P+ +Y +I K +D A++++ M+ + PDT TYS +I+ L K+
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G + A L EM +G + T+N ++ + K+ + + A+ L + M++ G QPD VTY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
+I+M+ L G L+ A+ VF ++ K + Y ++++ K G D+A M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G P+ T +++ +A LL+ M+A GL
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%)
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D TY +++ Q E +LLDEM R P+ +T+N L+ + G+ +KEA NV
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M + G +PD TY +L+D + ++ A+ + M + G++P+ +YS+II+ L K
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
+ A LF EM P+ +T++ +I K+ A +L +M N G DK TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
+ +++VL +++A + +M+ + PD Y +L+D K G + A + +Q ++
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY 485
G V T N +++ + EA LL M G P T+ ++ + N+
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNF 656
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 128/249 (51%)
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+ G K D TY +++ + + +L+ M + G PN +Y+ +IH + +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
EA+N+F +M+ PD +TY +LID K+G + A ++ M G D FTY+ ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
+ L K+ H+ A L +M QG P++VT+NI++ K + A ++++D+ G+
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
TY+I++ L G +EA + +EM+ K +PD + ++ + G+ KA +
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 491 LREMMARGL 499
+ M+ GL
Sbjct: 592 YQAMLQAGL 600
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 160/334 (47%), Gaps = 2/334 (0%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A +V ++ + G PD VT TLI G + A+ + + G + +Y +I
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
L + G A+ +L ++ G PN+V +N +I K + A L+ +M P
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D VTY+ ++ G L+EA + EM RKN PD + LVD GK GNV +A
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M++ G++P++ T NSL+ + V+ +++A +L SM G+ P++ +Y++++ C +
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL-SCCTD 651
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI-SHAWELVDEMHNKGQPADKFT 365
+ + ++ + P + + ++ H +D MH++ + + +
Sbjct: 652 ARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGL 711
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
++++D L KS ++A ++ + + + PD +
Sbjct: 712 MDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDAL 745
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 2/326 (0%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
KP + + L ++ LV +A +++ + +S VVT NS+L G +L E
Sbjct: 142 KPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWE 201
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L EM + I L+ AL G+V E +L +KQG+ P + Y L+ G+C
Sbjct: 202 LHKEMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC 259
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ +L++M P+++ Y II GLC NK EA +F ++ PD +
Sbjct: 260 EIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRV 319
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
Y+++I G C+ G + A +L EM KG ++F YN ++ K + A +M
Sbjct: 320 VYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEM 379
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
G +++ N ++ G C G+ A E+F+++ G TYN +I G CKE
Sbjct: 380 LRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKV 439
Query: 450 DEALALLSEMEDKGCIPDAITFETII 475
++ L L E++ G P + + ++
Sbjct: 440 EKGLKLYKELKALGLKPSGMAYAALV 465
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 130/257 (50%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D+ + LI+ LC G+V + + +G Q Y LI G C +G ++L
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVL 271
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+ P++ +Y II LC +K +A+ +F + K +PD V Y +++ GFC
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEK 331
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
G L A +L EM +K + P+ +N ++ K G + + M++ G + +
Sbjct: 332 GWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSC 391
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N+++ G+C + ++A I +M++ GVTPN +Y+ +I G CK V++ L L+ E++
Sbjct: 392 NTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKA 451
Query: 322 IKIIPDTITYSSLIDGL 338
+ + P + Y++L+ L
Sbjct: 452 LGLKPSGMAYAALVRNL 468
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 152/344 (44%), Gaps = 12/344 (3%)
Query: 51 GTSPTPSIIEF--------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKG-EVRR 101
G P P+++E G + A V + G VT +++ G CLK ++ R
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLG-CLKARKLDR 198
Query: 102 ALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIID 161
+ H ++V F ++ LI+ LC G +LL+Q + P +Y +I
Sbjct: 199 FWELHKEMVESEFDSERIR--CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLIS 256
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
C+ + + M+ P + Y ++ G C+ + EA + + K P
Sbjct: 257 GFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP 316
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D + + T++ ++G + A+ + M+K+G++P+ F YN ++ G+ EI+ A
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
N M + G + S + +I G C + DEA +F M + P+ ITY++LI G CK
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE 436
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
++ +L E+ G Y +L+ L S V ++ L
Sbjct: 437 NKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%)
Query: 47 NRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFH 106
+R++ T+ E G + SA + +++KKG RP+ +I G +GE+ F+
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 107 DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKD 166
++++ G+ +S T+IKG C G++ + ++ + + V PN + YN +I CK+
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE 436
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
V L+ E+ + P + Y +L+
Sbjct: 437 NKVEKGLKLYKELKALGLKPSGMAYAALV 465
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 152/318 (47%)
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
FR Y L+K G+ +A +L+ ++ +N +I + + L D
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVV 207
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
F + P +YN++L+ V Q K + ++M PDV+T+N ++ A
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
+ G +L M+K G PDL+TYN L+ N+ A+ +LN M + GV P V
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
++ +I GL + ++ E + PD + Y+ +I G G + A E+ E
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKE 387
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M KGQ + FTYNS++ C + +A AL K+M +G P+ V Y+ L++ L G+
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 447
Query: 414 LKNAQEVFQDLVIKGYHV 431
+ A EV +D+V KG++V
Sbjct: 448 VLEAHEVVKDMVEKGHYV 465
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 143/308 (46%)
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
Y+ L+ F G+ K L+DEM + TFN L+ G+ G ++
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 251 KQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVD 310
+P +YN+++ V + + M + G TP+V +Y+I++ + D
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
L EM PD TY+ L+ L + A L++ M G + +L+
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
D L ++ ++ + G PDVV Y +++ G G L+ A+E+F+++ KG
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
V TYN MI G C G F EA ALL EME +GC P+ + + T++ L G +A ++
Sbjct: 395 PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
Query: 491 LREMMARG 498
+++M+ +G
Sbjct: 455 VKDMVEKG 462
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 143/292 (48%), Gaps = 6/292 (2%)
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK---NIGPDVITFNTLVD 231
L EM+ T+N L+ C G+ A +++++ + N P ++N ++
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+L K V M++ G PD+ TYN +M + + ++ +L+ M + G +P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
++++Y+I++H L ALNL M + + P I +++LIDGL ++G++ +
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
DE G D Y ++ ++KA + K+M ++G P+V TYN ++ G C
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
G+ K A + +++ +G + Y+ ++N L G EA ++ +M +KG
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 10/219 (4%)
Query: 45 IFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLC 94
++ ++L TP ++ + G+ + +L +++K G+ PD T L+ L
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 95 LKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV 154
+ AL + + G + + TLI GL R G+ A + + P+VV
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
Y +I + A +F EM K P+V TYNS++ GFC+ G+ KEA LL EM
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 215 TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
+ P+ + ++TLV+ L G V EA V+ M+++G
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 116/241 (48%)
Query: 79 YRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASL 138
YRP + ++ L + + ++ ++ GF + ++Y ++ R+G+T
Sbjct: 218 YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLY 277
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+LL ++ P++ YN ++ L A NL + M V P V+ + +L+ G
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
G+L+ +DE + PDV+ + ++ G +++A+ + M ++G P++
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
FTYNS++ G+C+ + +A A+L M RG PN YS +++ L V EA + +
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Query: 319 M 319
M
Sbjct: 458 M 458
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
V ++L+ G+ PD +T ++ G+ R + D++V GF + +Y L+ L
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ A+L LL + V+P V+ + T+ID L + + E V +PDVV
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
Y ++ G+ G+L++A E+ EMT K P+V T+N+++ G KEA +L M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
+G P+ Y++L++ ++ +A ++ M ++G
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 166/352 (47%), Gaps = 2/352 (0%)
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
+GF + +Y +++ L + Q + +L ++ G + + + + K
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKK 246
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A +F M K V T N LL KEA L D++ ++ P+++T+ L++
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLN 305
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ N+ EA + M+ G+KPD+ +N +++G + + AI + + M +G P
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
NV SY+I+I CK ++ A+ F +M + PD Y+ LI G ++ +EL+
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
EM KG P D TYN+L+ ++ + + KM I+P + T+N++M
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
+ + V+ +++ KG +Y ++I GL EG EA L EM DKG
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 537
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 168/344 (48%), Gaps = 2/344 (0%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
YN+++ L K + ++ EM K + + T+ + F + K+A + + M
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
+ V T N L+D+LG+ KEA+ VL +K+ P++ TY L++G+C V +
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
+A I N M G+ P++ ++++++ GL ++ +A+ LF M+ P+ +Y+ +I
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 374
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
CK + A E D+M + G D Y L+ +D L K+M+++G
Sbjct: 375 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 434
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
PD TYN L+ + + ++ ++ ++ ++ T+N+++ ++ A+
Sbjct: 435 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 494
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EM KG PD ++ +I L +G + +A + L EM+ +G+
Sbjct: 495 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 176/363 (48%), Gaps = 4/363 (1%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
++G+ D+ T +++ L + + +++ +G L ++ +K + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 245
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
++ + ++ + K V N ++DSL + KL +A LF ++ ++ +P+++TY LL
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLL 304
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
G+C V L EA + ++M + PD++ N +++ L + +A + VM +G
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P++ +Y ++ +C + + AI + M G+ P+ Y+ +I G K +D L
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLC 374
EM+ PD TY++LI + H + ++M N+ +P+ T+N ++
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH-TFNMIMKSYF 483
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ + + A+ +M +GI PD +Y +L+ GL EG+ + A ++++ KG +
Sbjct: 484 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 543
Query: 435 TYN 437
YN
Sbjct: 544 DYN 546
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
VL LK+ + P+ +T T L+ G C + A + +D++ G + + V++ +++GL
Sbjct: 284 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 343
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
R + +++L ++ PNV Y +I CK + A F +MV + PD
Sbjct: 344 RSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 403
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
Y L+ GF +L ELL EM K PD T+N L+ + + + + M
Sbjct: 404 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 463
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
++ ++P + T+N +M Y + A+ + M ++G+ P+ +SY+++I GL
Sbjct: 464 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
EA EM + I Y+ + G+ E+ +E+ + + + KF
Sbjct: 524 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSGKFA 575
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A + ++ G +PD V +++GL + A++ + ++G N SY +I+
Sbjct: 316 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 375
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
C+ +++ + ++P+ +Y +I K + + L EM K P
Sbjct: 376 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 435
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D TYN+L+ + T + ++M + I P + TFN ++ + N + + V
Sbjct: 436 DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 495
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV-TP 291
M+K+G+ PD +Y L+ G + +A L M +G+ TP
Sbjct: 496 DEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 58/258 (22%)
Query: 30 HSLSPSI--HNA-----------DDAISIFNRLLGTSPTPSIIEF----------GQIPS 66
H L P I HN DAI +F+ + P P++ + + +
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A ++ G +PDA T LI G + ++ D V
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL--------DTV---------------- 421
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
+LL++++ P+ YN +I + K+ ++++M+ ++ P
Sbjct: 422 -----------YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ T+N ++ + + + + DEM +K I PD ++ L+ L EG +EA L
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 247 AVMMKQGVKPDLFTYNSL 264
M+ +G+K L YN
Sbjct: 531 EEMLDKGMKTPLIDYNKF 548
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 185/431 (42%), Gaps = 36/431 (8%)
Query: 66 SAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLI 125
SAF VL + G L+ GL G A + + +G LN + +G I
Sbjct: 135 SAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYI 194
Query: 126 KGLCRMGQTRASLQLLRQVEGHLVKPN-VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV 184
CR +T L+L+ +V+ + N ++ I+ SLCK DAF + E+
Sbjct: 195 GWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDC 254
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKN 244
PD + Y + F + G L E +L + + + P + + L + EAK
Sbjct: 255 KPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKE 314
Query: 245 V----------------------------------LAVMMKQGVKPDLFTYNSLMDGYCL 270
V L M+ G P + T + L C
Sbjct: 315 VAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCR 374
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
++ + I ++ +G + SYS++I LCK V E+ EM+ + PD
Sbjct: 375 HDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSL 434
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y++LI+ CK+ I A +L DEM +G + TYN L+ L + ++++ L KM
Sbjct: 435 YNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKML 494
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH-VTVRTYNIMINGLCKEGLF 449
++GI+PD Y L++GLCKE +++ A EVF+ + + + VT R + + LC G
Sbjct: 495 ERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHS 554
Query: 450 DEALALLSEME 460
EA LL E E
Sbjct: 555 GEASQLLRERE 565
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 182/428 (42%), Gaps = 8/428 (1%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
+ GY D+++ ++ K L L + V + L+ Y +LI L + +
Sbjct: 75 QPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQ 134
Query: 136 ASLQLLRQV--EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
++ +L + G + P+V N ++ L D A LF +M K VS + + +
Sbjct: 135 SAFWVLEEAFSTGQEIHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGV 192
Query: 194 LLYGFCIVGQLKEATELLDEMTRKN--IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
+ FC + + L+DE+ + N I +I ++ +L K +A +L +
Sbjct: 193 YIGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL-LILHSLCKCSREMDAFYILEELRN 251
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
KPD Y + + + + + + +L + GV P Y I L K + E
Sbjct: 252 IDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTE 311
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
A + + K D +LI G + A E + M + G+ T + L
Sbjct: 312 AKEVAEVIVSGKFPMDNDILDALI-GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSK 370
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
LC+ D I + + +G ++ +Y++++ LCK GR++ + Q++ +G
Sbjct: 371 NLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAP 430
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLL 491
V YN +I CK + A L EM +GC + T+ +I L E+G+ ++ +L
Sbjct: 431 DVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLF 490
Query: 492 REMMARGL 499
+M+ RG+
Sbjct: 491 DKMLERGI 498
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 13/256 (5%)
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR-GVTPNVHSYSIIIHGLCKNKM 308
+ + P L ++D + L+N + A+ N AQ+ G + + SY I L ++
Sbjct: 41 FRHSISPSLVA--RVIDPF-LLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQ 97
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
LF +++ KI+ D+ Y SLID L + A+ +++E + GQ N
Sbjct: 98 FSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNR 157
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR----LKNAQEVFQ-D 423
LL L D A L KMR +G+ + + + + + C+ L+ EV + +
Sbjct: 158 LLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKAN 217
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
L I G + + ++++ LCK +A +L E+ + C PD + + I A G+
Sbjct: 218 LNINGSIIAL----LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGN 273
Query: 484 NYKAEKLLREMMARGL 499
Y+ + +L++ G+
Sbjct: 274 LYERQVVLKKKRKLGV 289
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 198/455 (43%), Gaps = 44/455 (9%)
Query: 65 PSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF-HDDVVARGFRLNQVSYGT 123
PS S L K+ + VT + + + L L + A +F H +G++ + +Y
Sbjct: 111 PSVVSELNKLRR-------VTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNA 163
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
L R G RA+ QL ++ P+ + +I ++ + ++ +M
Sbjct: 164 FAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFG 223
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
P V YN ++ G A + ++ + + TF LV L K G ++E
Sbjct: 224 FKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEML 283
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+L M + KPD+F Y +++ ++ ++ + + M + + P+V +Y ++ GL
Sbjct: 284 EILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGL 343
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
CK+ V+ LF EM+ +I+ D Y LI+G G++ A L +++ + G AD
Sbjct: 344 CKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADI 403
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL--------- 414
YN+++ LC + VDKA L + ++ ++PD T + +M RL
Sbjct: 404 GIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLER 463
Query: 415 ------------------------KNAQ--EVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
KNA +VF L KG H +V YNI++ L K G
Sbjct: 464 IGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGD 522
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
++L+L EM G PD+ ++ IC EKGD
Sbjct: 523 IQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 183/398 (45%), Gaps = 35/398 (8%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+I +L ++ + +PD T +IK L +G + +L+ D++ + + ++Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
GTL+ GLC+ G+ +L +++G + + +Y +I+ D V A NL+ ++V
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVIT---------------- 225
D+ YN+++ G C V Q+ +A +L + + PD T
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSD 456
Query: 226 FNTLVDALGKEGN--------------VKEAKNVLAV----MMKQGVKPDLFTYNSLMDG 267
F+ +++ +G+ G E KN +A+ ++K + YN LM+
Sbjct: 457 FSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEA 516
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
+ +I K++++ M + G P+ SYSI I + V A + ++ + +P
Sbjct: 517 LYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPS 576
Query: 328 TITYSSLIDGLCKSGRISHAWELVDE-MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
Y SL GLC+ G I LV E + N +F Y + +CK + +K + +
Sbjct: 577 IAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVV 636
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
+M +G+ + V Y ++ G+ K G +K A+EVF +L
Sbjct: 637 DEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 16/299 (5%)
Query: 215 TRKNIGPDVIT-FNTL----------VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
R + GP V++ N L V LG + V AK ++G K D YN+
Sbjct: 105 NRNHWGPSVVSELNKLRRVTPSIVAEVLKLGNDAAVA-AKFFHWAGKQKGYKHDFAAYNA 163
Query: 264 LMDGYCLVN--EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
YCL A + M +G P+ + I+I N+ ++ +M+
Sbjct: 164 F--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKK 221
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
P Y+ ++D L K+G A + ++ G + T+ L+ LCK+ +++
Sbjct: 222 FGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEE 281
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
+ + ++MR+ +PDV Y ++ L EG L + V+ ++ V Y ++
Sbjct: 282 MLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVV 341
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
GLCK+G + L EM+ K + D + +I G A L +++ G +
Sbjct: 342 GLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYI 400
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 2/352 (0%)
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
+GF +Y +++ L + Q + +L ++ G + + + + K
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A +F M K V T N LL KEA L D++ ++ P+++T+ L++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLN 306
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ N+ EA + M+ G+KPD+ +N +++G + + AI + + M +G P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 366
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
NV SY+I+I CK ++ A+ F +M + PD Y+ LI G ++ +EL+
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
EM KG P D TYN+L+ ++ + + KM I+P + T+N++M
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 486
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
+ + V+ +++ KG +Y ++I GL EG EA L EM DKG
Sbjct: 487 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 168/344 (48%), Gaps = 2/344 (0%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
YN+++ L K + ++ EM K + + T+ + F + K+A + + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
+ V T N L+D+LG+ KEA+ VL +K+ P++ TY L++G+C V +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
+A I N M G+ P++ ++++++ GL ++ +A+ LF M+ P+ +Y+ +I
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
CK + A E D+M + G D Y L+ +D L K+M+++G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
PD TYN L+ + + ++ ++ ++ ++ T+N+++ ++ A+
Sbjct: 436 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 495
Query: 456 LSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
EM KG PD ++ +I L +G + +A + L EM+ +G+
Sbjct: 496 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 175/363 (48%), Gaps = 4/363 (1%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
++G+ + T +++ L + + +++ +G L ++ +K + +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 246
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
++ + ++ + K V N ++DSL + KL +A LF ++ ++ +P+++TY LL
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLL 305
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
G+C V L EA + ++M + PD++ N +++ L + +A + VM +G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P++ +Y ++ +C + + AI + M G+ P+ Y+ +I G K +D L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLC 374
EM+ PD TY++LI + H + ++M N+ +P+ T+N ++
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH-TFNMIMKSYF 484
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ + + A+ +M +GI PD +Y +L+ GL EG+ + A ++++ KG +
Sbjct: 485 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 544
Query: 435 TYN 437
YN
Sbjct: 545 DYN 547
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
VL LK+ + P+ +T T L+ G C + A + +D++ G + + V++ +++GL
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 344
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
R + +++L ++ PNV Y +I CK + A F +MV + PD
Sbjct: 345 RSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
Y L+ GF +L ELL EM K PD T+N L+ + + + + M
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 464
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
++ ++P + T+N +M Y + A+ + M ++G+ P+ +SY+++I GL
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
EA EM + I Y+ + G+ E+ +E+ + + + KF
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSGKFA 576
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/413 (19%), Positives = 179/413 (43%), Gaps = 11/413 (2%)
Query: 16 LNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKIL 75
L F KP+F + A +N ++ + + Q + SVL ++
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSI-----LAKTRQFETMVSVLEEMG 222
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
KG T T +K E ++A+ + + F++ + L+ L R +
Sbjct: 223 TKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGK 281
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+ L +++ PN++ Y +++ C+ + + +A ++++M+ + PD+V +N +L
Sbjct: 282 EAQVLFDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
G + +A +L M K P+V ++ ++ K+ +++ A M+ G++
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
PD Y L+ G+ +++ +L M ++G P+ +Y+ +I + KM + +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
+ +M +I P T++ ++ + + DEM KG D +Y L+ L
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
+A ++M D+G++ ++ YN + G+ E+F++L +
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFEELAQRA 569
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 145/293 (49%), Gaps = 9/293 (3%)
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTL---VDALGKEGNVKEAKNVL 246
TYN+++ EL++EM KN ++T +T+ + L K G +A +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMN-KNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF 226
Query: 247 AVMMKQ-GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M K GVK D NSLMD N I A + + + P+ +++I+IHG CK
Sbjct: 227 LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCK 285
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+ D+A + M+ + PD +TY+S ++ CK G E+++EM G + T
Sbjct: 286 ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVT 345
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
Y ++ L KS V +A+ + +KM++ G PD Y+ L+ L K GR K+A E+F+D+
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMT 405
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED---KGCIPDAITFETII 475
+G V YN MI+ + AL LL MED + C P+ T+ ++
Sbjct: 406 NQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 5/328 (1%)
Query: 159 IIDSLCKDKLVSDAFNLFSEMVVKK-VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK 217
++ L K + A + F EM V D + NSL+ ++ A E+ ++
Sbjct: 209 VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-D 267
Query: 218 NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKA 277
I PD TFN L+ K +A+ ++ +M PD+ TY S ++ YC + +
Sbjct: 268 TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG 337
+L M + G PNV +Y+I++H L K+K V EAL ++ +M+ +PD YSSLI
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 338 LCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ---GI 394
L K+GR A E+ ++M N+G D YN+++ + A+ L K+M D+
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESC 447
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
P+V TY L+ C + ++K + +V + V TY ++I GLC G +EA
Sbjct: 448 SPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACL 507
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKG 482
E KG +P T + ++ L +K
Sbjct: 508 FFEEAVRKGMVPRDSTCKMLVDELEKKN 535
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 28/255 (10%)
Query: 260 TYNSLMD--GYC--------LVNEINK----AIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
TYN+++D G C LVNE+NK + L++M++ ++ L K
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSK------------VMRRLAK 215
Query: 306 NKMVDEALNLFAEME-CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
+ ++A++ F EME + DTI +SL+D L K I HA E+ ++ + +P D
Sbjct: 216 SGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKP-DAR 274
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
T+N L+ CK+ D A A+ M+ PDVVTY ++ CKEG + E+ +++
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDN 484
G + V TY I+++ L K EAL + +M++ GC+PDA + ++I L + G
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 485 YKAEKLLREMMARGL 499
A ++ +M +G+
Sbjct: 395 KDAAEIFEDMTNQGV 409
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 4/287 (1%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
++++ I A V K+ +PDA T LI G C + A D + F
Sbjct: 248 ALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTP 306
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ V+Y + ++ C+ G R ++L ++ + PNVV Y ++ SL K K V++A ++
Sbjct: 307 DVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVY 366
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
+M PD Y+SL++ G+ K+A E+ ++MT + + DV+ +NT++ A
Sbjct: 367 EKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHH 426
Query: 237 GNVKEAKNVLAVMMK---QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
+ A +L M + P++ TY L+ C ++ +L+ M + V+ +V
Sbjct: 427 SRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDV 486
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
+Y ++I GLC + V+EA F E ++P T L+D L K
Sbjct: 487 STYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 166/385 (43%), Gaps = 40/385 (10%)
Query: 85 TLTTLIKGLCLKGEVRRALQ-FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQ 143
T++ +++ L G+ +A+ F + + G + + ++ +L+ L + + ++ +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 144 VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ 203
+ +KP+ +N +I CK + DA + M V + +PDVVTY S + +C G
Sbjct: 265 L-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+ E+L+EM P+V+T+ ++ +LGK V EA V M + G PD Y+S
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
L+ A I M +GV +V Y+ +I + + AL L ME +
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 324 ---IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
P+ TY+ L+ + LL +L HH
Sbjct: 444 GESCSPNVETYAPLL-----------------------KMCCHKKKMKLLGILL--HH-- 476
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
M + DV TY +L+ GLC G+++ A F++ V KG T +++
Sbjct: 477 --------MVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Query: 441 NGLCKEGLFDEALALLSEMEDKGCI 465
+ L K+ + + L + S ++ K I
Sbjct: 529 DELEKKNMAEAKLKIQSLVQSKTMI 553
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 6/274 (2%)
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP--DLFTYNSLMDGYCLVNEINKAI-AIL 281
T+N +VD LGK N ++ M K L T + +M + NKA+ A L
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGLCK 340
GV + + + ++ L K ++ A +F ++ + IK PD T++ LI G CK
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK--PDARTFNILIHGFCK 285
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVT 400
+ + A ++D M D TY S ++ CK + + ++MR+ G P+VVT
Sbjct: 286 ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVT 345
Query: 401 YNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME 460
Y I+M L K ++ A V++ + G + Y+ +I+ L K G F +A + +M
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMT 405
Query: 461 DKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
++G D + + T+I A + A +LL+ M
Sbjct: 406 NQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 195/423 (46%), Gaps = 24/423 (5%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYR--PDAVTLTTLIKGLCLK-----GEVRRALQFHDDVV 110
++E SA VL + G + P + L TL++ LK E+ L++ +
Sbjct: 77 MLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQN--- 133
Query: 111 ARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVS 170
+ +++ + LI ++G + ++L + PNV+ Y +++S + +
Sbjct: 134 --WWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCN 191
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE----LLDEMTRKNIGPDVITF 226
+A +F M P +TY +L F + KEA E LLDE + + PD +
Sbjct: 192 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDE-KKSPLKPDQKMY 250
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
+ ++ K GN ++A+ V + M+ +GV TYNSLM E++K I + M +
Sbjct: 251 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQR 307
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
+ P+V SY+++I + + +EAL++F EM + P Y+ L+D SG +
Sbjct: 308 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A + M D ++Y ++L + ++ A K+++ G +P++VTY L+
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHV--TVRTYNIMINGLCKEGLFDEALALLSEMEDKGC 464
G K ++ EV++ + + G T+ T + +G CK F AL EME G
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGV 485
Query: 465 IPD 467
PD
Sbjct: 486 PPD 488
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 168/364 (46%), Gaps = 6/364 (1%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+ G A VL + K G P+ ++ T L++ G+ A + + G + +
Sbjct: 151 KLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAI 210
Query: 120 SYGTLIKGLC---RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+Y ++K + + + L + +KP+ MY+ +I K A +F
Sbjct: 211 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
S MV K V VTYNSL+ KE +++ D+M R +I PDV+++ L+ A G+
Sbjct: 271 SSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRA 327
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
+EA +V M+ GV+P YN L+D + + + +A + SM + + P++ SY
Sbjct: 328 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 387
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+ ++ ++ A F ++ P+ +TY +LI G K+ + E+ ++M
Sbjct: 388 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 447
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
G A++ +++D + + A+ K+M G+ PD N+L+ + L+
Sbjct: 448 SGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEE 507
Query: 417 AQEV 420
A+E+
Sbjct: 508 AKEL 511
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 6/279 (2%)
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
I F L+ A GK GN A+ VL+V+ K G P++ +Y +LM+ Y + N A AI
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK---IIPDTITYSSLIDGLCK 340
M G P+ +Y II+ + EA +F + K + PD Y +I K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVT 400
+G A ++ M KG P TYNSL+ V K + +M+ IQPDVV+
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVS 316
Query: 401 YNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME 460
Y +L+ + R + A VF++++ G T + YNI+++ G+ ++A + M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 461 DKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
PD ++ T++ A D AEK + + G
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 175/393 (44%), Gaps = 27/393 (6%)
Query: 13 FLRLNNFPVVSKPSF----HSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF------- 61
+LR N+ S+ F ++ + + A+ +S+ +++ TP++I +
Sbjct: 128 WLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKM---GSTPNVISYTALMESY 184
Query: 62 ---GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD---DVVARGFR 115
G+ +A ++ ++ G P A+T ++K + + A + + D +
Sbjct: 185 GRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLK 244
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
+Q Y +I + G + ++ + G V + V YN+++ K VS +
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KI 301
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
+ +M + PDVV+Y L+ + + +EA + +EM + P +N L+DA
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G V++AK V M + + PDL++Y +++ Y +++ A + G PN+ +
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID--GLCKSGRISHAWELVDE 353
Y +I G K V++ + ++ +M I + ++++D G CK+ + W E
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW--YKE 479
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
M + G P D+ N LL + +++A LT
Sbjct: 480 MESCGVPPDQKAKNVLLSLASTQDELEEAKELT 512
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 195/423 (46%), Gaps = 24/423 (5%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYR--PDAVTLTTLIKGLCLK-----GEVRRALQFHDDVV 110
++E SA VL + G + P + L TL++ LK E+ L++ +
Sbjct: 84 MLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQN--- 140
Query: 111 ARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVS 170
+ +++ + LI ++G + ++L + PNV+ Y +++S + +
Sbjct: 141 --WWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCN 198
Query: 171 DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE----LLDEMTRKNIGPDVITF 226
+A +F M P +TY +L F + KEA E LLDE + + PD +
Sbjct: 199 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDE-KKSPLKPDQKMY 257
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
+ ++ K GN ++A+ V + M+ +GV TYNSLM E++K I + M +
Sbjct: 258 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQR 314
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
+ P+V SY+++I + + +EAL++F EM + P Y+ L+D SG +
Sbjct: 315 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 374
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A + M D ++Y ++L + ++ A K+++ G +P++VTY L+
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHV--TVRTYNIMINGLCKEGLFDEALALLSEMEDKGC 464
G K ++ EV++ + + G T+ T + +G CK F AL EME G
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGV 492
Query: 465 IPD 467
PD
Sbjct: 493 PPD 495
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 168/364 (46%), Gaps = 6/364 (1%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+ G A VL + K G P+ ++ T L++ G+ A + + G + +
Sbjct: 158 KLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAI 217
Query: 120 SYGTLIKGLC---RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+Y ++K + + + L + +KP+ MY+ +I K A +F
Sbjct: 218 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
S MV K V VTYNSL+ KE +++ D+M R +I PDV+++ L+ A G+
Sbjct: 278 SSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRA 334
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
+EA +V M+ GV+P YN L+D + + + +A + SM + + P++ SY
Sbjct: 335 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 394
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+ ++ ++ A F ++ P+ +TY +LI G K+ + E+ ++M
Sbjct: 395 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 454
Query: 357 KGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
G A++ +++D + + A+ K+M G+ PD N+L+ + L+
Sbjct: 455 SGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEE 514
Query: 417 AQEV 420
A+E+
Sbjct: 515 AKEL 518
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 10/304 (3%)
Query: 203 QLKE---ATELLDEMTRKNIGP-DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
QLK+ +E+L+ + +N I F L+ A GK GN A+ VL+V+ K G P++
Sbjct: 122 QLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNV 181
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
+Y +LM+ Y + N A AI M G P+ +Y II+ + EA +F
Sbjct: 182 ISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFET 241
Query: 319 MECIK---IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
+ K + PD Y +I K+G A ++ M KG P TYNSL+
Sbjct: 242 LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS 301
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
V K + +M+ IQPDVV+Y +L+ + R + A VF++++ G T +
Sbjct: 302 YKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 358
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
YNI+++ G+ ++A + M PD ++ T++ A D AEK + +
Sbjct: 359 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 418
Query: 496 ARGL 499
G
Sbjct: 419 VDGF 422
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 175/393 (44%), Gaps = 27/393 (6%)
Query: 13 FLRLNNFPVVSKPSF----HSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF------- 61
+LR N+ S+ F ++ + + A+ +S+ +++ TP++I +
Sbjct: 135 WLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKM---GSTPNVISYTALMESY 191
Query: 62 ---GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD---DVVARGFR 115
G+ +A ++ ++ G P A+T ++K + + A + + D +
Sbjct: 192 GRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLK 251
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
+Q Y +I + G + ++ + G V + V YN+++ K VS +
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KI 308
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
+ +M + PDVV+Y L+ + + +EA + +EM + P +N L+DA
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G V++AK V M + + PDL++Y +++ Y +++ A + G PN+ +
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID--GLCKSGRISHAWELVDE 353
Y +I G K V++ + ++ +M I + ++++D G CK+ + W E
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW--YKE 486
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
M + G P D+ N LL + +++A LT
Sbjct: 487 MESCGVPPDQKAKNVLLSLASTQDELEEAKELT 519
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 178/360 (49%), Gaps = 3/360 (0%)
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
+L+++ G PN + I+ C+ VS+AF + M+ +S V ++ L+ GF
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
G+ ++A +L ++M + P+++T+ +L+ G V EA VL+ + +G+ PD+
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
N ++ Y + +A + S+ +R + P+ ++++ I+ LC + D +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI---T 375
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
I D +T + L + K G S+A +++ M K D +TY L LC+
Sbjct: 376 HGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
AI + K + + D ++ ++D L + G+ A +F+ +++ Y + V +Y +
Sbjct: 436 RAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVA 495
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
I GL + +EA +L +M++ G P+ T+ TII L ++ + K K+LRE + G+
Sbjct: 496 IKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 177/359 (49%), Gaps = 3/359 (0%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
VL +++ +G+ P+ +++ C G V A Q ++ G ++ + L+ G
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
R G+ + ++ L ++ PN+V Y ++I +V +AF + S++ + ++PD+V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
N +++ + +G+ +EA ++ + ++ + PD TF +++ +L G + +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
G DL T N L + + + + A+ +L+ M+ + + ++Y++ + LC+
Sbjct: 379 ---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
A+ ++ + K D +S++ID L + G+ + A L + P D +Y
Sbjct: 436 RAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVA 495
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
+ L ++ +++A +L M++ GI P+ TY ++ GLCKE + +++ ++ + +G
Sbjct: 496 IKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEG 554
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 174/355 (49%), Gaps = 3/355 (0%)
Query: 109 VVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKL 168
++ GF N+ +G +++ CR G + Q++ + + +V +++ ++ +
Sbjct: 203 MIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGE 262
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
A +LF++M+ SP++VTY SL+ GF +G + EA +L ++ + + PD++ N
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNL 322
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
++ + G +EA+ V + K+ + PD +T+ S++ CL + + I + + G
Sbjct: 323 MIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---G 379
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
++ + +++ + K AL + + M D TY+ + LC+ G A
Sbjct: 380 TDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAI 439
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
++ + + + D +++++D L + + A+ L K+ + DVV+Y + + GL
Sbjct: 440 KMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGL 499
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
+ R++ A + D+ G + RTY +I+GLCKE ++ +L E +G
Sbjct: 500 VRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEG 554
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 162/371 (43%), Gaps = 45/371 (12%)
Query: 45 IFNRLLGTSPTPSIIEFGQI----------PSAFSVLGKILKKGYRPDAVTLTTLIKGLC 94
+ R++G P+ FGQI AF V+G ++ G + L+ G
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 95 LKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV 154
GE ++A+ + ++ G N V+Y +LIKG +G + +L +V+ + P++V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 155 MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL---------- 204
+ N +I + + +A +F+ + +K+ PD T+ S+L C+ G+
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Query: 205 ----------------------KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
A ++L M+ K+ D T+ + AL + G + A
Sbjct: 379 GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 243 KNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG 302
+ +++K+ D +++++D + + N A+ + +V SY++ I G
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG---Q 359
L + K ++EA +L +M+ I P+ TY ++I GLCK +++ E +G
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Query: 360 PADKFTYNSLL 370
P KF SLL
Sbjct: 559 PNTKFQVYSLL 569
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 36/259 (13%)
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
+KP +F L++ + + +KAI + M+ G PN + ++++ K +V+ AL
Sbjct: 106 IKPRVFLL--LLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGAL 163
Query: 314 NLF------------------------AEMECIKII----------PDTITYSSLIDGLC 339
+F ++ +KI+ P+ + ++ C
Sbjct: 164 EIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCC 223
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
++G +S A+++V M G ++ L+ +S KA+ L KM G P++V
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
TY L+ G G + A V + +G + N+MI+ + G F+EA + + +
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 460 EDKGCIPDAITFETIICAL 478
E + +PD TF +I+ +L
Sbjct: 344 EKRKLVPDQYTFASILSSL 362
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 183/380 (48%), Gaps = 5/380 (1%)
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
L +++ + G + +Q + + G +++ +Y + IK + ++A L++ + +
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVGAKNVSKA-LEIYQSIP 158
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ-- 203
K NV + N+I+ L K+ + LF +M + PDVVTYN+LL G CI +
Sbjct: 159 DESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAG-CIKVKNG 217
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+A EL+ E+ I D + + T++ G +EA+N + M +G P+++ Y+S
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
L++ Y + KA ++ M G+ PN + ++ K + D + L +E+E
Sbjct: 278 LLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG 337
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
+ + Y L+DGL K+G++ A + D+M KG +D + + ++ LC+S +A
Sbjct: 338 YAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAK 397
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
L++ + D+V N ++ C+ G +++ + + + + T++I+I
Sbjct: 398 ELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF 457
Query: 444 CKEGLFDEALALLSEMEDKG 463
KE L A +M KG
Sbjct: 458 IKEKLHLLAYQTTLDMHSKG 477
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 188/404 (46%), Gaps = 5/404 (1%)
Query: 97 GEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMY 156
EV+R+ F + L +++ G+ + +QL ++ H K +V Y
Sbjct: 77 SEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQH-GKISVSTY 135
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
++ I K VS A ++ + + +V NS+L G+L +L D+M R
Sbjct: 136 SSCI-KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKR 194
Query: 217 KNIGPDVITFNTLVDALGKEGN-VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN-EI 274
+ PDV+T+NTL+ K N +A ++ + G++ D Y +++ C N
Sbjct: 195 DGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVL-AICASNGRS 253
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL 334
+A + M G +PN++ YS +++ +A L EM+ I ++P+ + ++L
Sbjct: 254 EEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTL 313
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
+ K G + EL+ E+ + G ++ Y L+D L K+ +++A ++ M+ +G+
Sbjct: 314 LKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
+ D +I++ LC+ R K A+E+ +D + N M+ C+ G + +
Sbjct: 374 RSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMR 433
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
++ +M+++ PD TF +I ++ + A + +M ++G
Sbjct: 434 MMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 193/437 (44%), Gaps = 38/437 (8%)
Query: 40 DDAISIFNRL-----LGTSPTPSIIEF---GQIPSAFSVLGKILKKGYRPDAVTLTTLIK 91
D I +F + + S S I+F + A + I + + + +++
Sbjct: 115 QDLIQLFEWMQQHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILS 174
Query: 92 GLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM--GQTRASLQLLRQVEGHLV 149
L G++ ++ D + G + + V+Y TL+ G ++ G +A ++L+ ++ + +
Sbjct: 175 CLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKA-IELIGELPHNGI 233
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+ + VMY T++ + +A N +M V+ SP++ Y+SLL + G K+A E
Sbjct: 234 QMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L+ EM + P+ + TL+ K G ++ +L+ + G + Y LMDG
Sbjct: 294 LMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLS 353
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
++ +A +I + M +GV + ++ SI+I LC++K EA L + E D +
Sbjct: 354 KAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLV 413
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT-----------------YNSLLDV 372
++++ C++G + ++ +M + D T Y + LD+
Sbjct: 414 MLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDM 473
Query: 373 LCKSHHVDKAIALT-----KKMRDQGIQPDVVTYNILM---DGLCKEGRLKNAQEVFQDL 424
K H +++ + + K+R Q V YN+L +CKE K + Q
Sbjct: 474 HSKGHRLEEELCSSLIYHLGKIRAQAEAFSV--YNMLRYSKRTICKELHEKILHILIQGN 531
Query: 425 VIKGYHVTVRTYNIMIN 441
++K ++ V+ MI+
Sbjct: 532 LLKDAYIVVKDNAKMIS 548
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 142/309 (45%), Gaps = 3/309 (0%)
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
NS L + +++ +++ L + R V N ++ G G ++ + M +
Sbjct: 67 NSYLARKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQ 126
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
G K + TY+S + + ++KA+ I S+ NV+ + I+ L KN +D
Sbjct: 127 HG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDS 184
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCK-SGRISHAWELVDEMHNKGQPADKFTYNSLL 370
+ LF +M+ + PD +TY++L+ G K A EL+ E+ + G D Y ++L
Sbjct: 185 CIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVL 244
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
+ + ++A ++M+ +G P++ Y+ L++ +G K A E+ ++ G
Sbjct: 245 AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLV 304
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
++ K GLFD + LLSE+E G + + + ++ L + G +A +
Sbjct: 305 PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
Query: 491 LREMMARGL 499
+M +G+
Sbjct: 365 FDDMKGKGV 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 15/247 (6%)
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N ++ + + I + M Q G +V +YS I K V A N+ +E
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHGKI-SVSTYSSCI------KFVG-AKNVSKALEI 153
Query: 322 IKIIPDTITY------SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
+ IPD T +S++ L K+G++ +L D+M G D TYN+LL K
Sbjct: 154 YQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIK 213
Query: 376 -SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ KAI L ++ GIQ D V Y ++ GR + A+ Q + ++G+ +
Sbjct: 214 VKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIY 273
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
Y+ ++N +G + +A L++EM+ G +P+ + T++ + G ++ +LL E+
Sbjct: 274 HYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL 333
Query: 495 MARGLLE 501
+ G E
Sbjct: 334 ESAGYAE 340
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/409 (19%), Positives = 175/409 (42%), Gaps = 24/409 (5%)
Query: 39 ADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKK----------GYRPDAVTLTT 88
+++A + ++ +P+I + + +++S G K G P+ V +TT
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT 312
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
L+K G R+ + ++ + G+ N++ Y L+ GL + G+ + + ++G
Sbjct: 313 LLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
V+ + + +I +LC+ K +A L + D+V N++L +C G+++
Sbjct: 373 VRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVM 432
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
++ +M + + PD TF+ L+ KE A M +G + + +SL+
Sbjct: 433 RMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHL 492
Query: 269 CLVNEINKAIAILNSM--AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
+ +A ++ N + ++R + +H I+H L + ++ +A + + + P
Sbjct: 493 GKIRAQAEAFSVYNMLRYSKRTICKELHEK--ILHILIQGNLLKDAYIVVKDNAKMISQP 550
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYN-SLLDVLCKSHHVDKAIAL 385
T SG I+ +++ +H G D+ + ++ + + + + L
Sbjct: 551 ---TLKKFGRAFMISGNINLVNDVLKVLHGSGHKIDQVQFEIAISRYISQPDKKELLLQL 607
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ M QG D T N+++ GRL A+ ++ +HV R
Sbjct: 608 LQWMPGQGYVVDSSTRNLILKNSHMFGRLLIAE------ILSKHHVASR 650
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 160/309 (51%), Gaps = 9/309 (2%)
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
DV+ +NS+L +C G+ +EA EL+ EM ++ I P ++T+N L+ + G A +++
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M G+ D+FT+ +++ G +A+ + M GV PN + +
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
K++++ + + + I D + +SL+D K G++ A ++ D + NK D +T+
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTW 421
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
NS++ C++ + KA L +M+D ++P+++T+N ++ G K G A ++FQ +
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 427 KG-YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY 485
G T+N++I G + G DEAL L +M+ +P+++T I +L N
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT----ILSLLPACANL 537
Query: 486 KAEKLLREM 494
K++RE+
Sbjct: 538 LGAKMVREI 546
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 187/406 (46%), Gaps = 9/406 (2%)
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
K ++ D + +++ C G+ A++ ++ G V++ LI G ++G
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+ A++ L++++E + +V + +I L + + A ++F +M + V P+ VT
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
S + + + + +E+ + DV+ N+LVD K G +++A+ V + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
D++T+NS++ GYC KA + M + PN+ +++ +I G KN EA
Sbjct: 417 ----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 313 LNLFAEMECI-KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
++LF ME K+ +T T++ +I G ++G+ A EL +M + T SLL
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
+ + + + N L D K G ++ ++ +F + K
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK---- 588
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+ T+N +I G G + ALAL ++M+ +G P+ T +II A
Sbjct: 589 DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 201/445 (45%), Gaps = 48/445 (10%)
Query: 93 LCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN 152
LC G + A + D + +G ++ + +Y L++ G ++L G +P+
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLG-RILHARFGLFTEPD 114
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
V + ++ K ++DA +F M + ++ T+++++ + + +E +L
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
M + + PD F ++ G+V+ K + +V++K G+ L NS++ Y
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
E++ A M +R +V +++ ++ C+N +EA+ L EME I P +T++
Sbjct: 231 ELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
LI G + G+ A +L+ +M G AD FT+ +++ L + +A+ + +KM
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 393 GIQPDVVTY-----------------------------------NILMDGLCKEGRLKNA 417
G+ P+ VT N L+D K G+L++A
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
++VF + K V T+N MI G C+ G +A L + M+D P+ IT+ T+I
Sbjct: 407 RKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 478 LFEKGDNYKAEKLLREMMARGLLEK 502
+ GD +A L + M G +++
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQR 487
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 196/452 (43%), Gaps = 51/452 (11%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+ A ++ ++ K+G P VT LI G G+ A+ + G + ++
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+I GL G +L + R++ V PN V + + + K+++ + S V
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
DV+ NSL+ + G+L++A ++ D + K DV T+N+++ + G +
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGK 436
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG-VTPNVHSYSIII 300
A + M ++P++ T+N+++ GY + +A+ + M + G V N ++++II
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI------------------------- 335
G +N DEAL LF +M+ + +P+++T SL+
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLD 556
Query: 336 ----------DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
D KSG I ++ + M K D T+NSL+ A+AL
Sbjct: 557 AIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALAL 612
Query: 386 TKKMRDQGIQPDVVTYN--ILMDGLCKEGRLKNAQEVFQDLVIKGYHV--TVRTYNIMIN 441
+M+ QGI P+ T + IL GL G + ++VF + YH+ + + M+
Sbjct: 613 FNQMKTQGITPNRGTLSSIILAHGLM--GNVDEGKKVFYS-IANDYHIIPALEHCSAMVY 669
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
+ +EAL + EM + P +F T
Sbjct: 670 LYGRANRLEEALQFIQEMNIQSETPIWESFLT 701
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 143/320 (44%), Gaps = 10/320 (3%)
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
KK P+++ Y C G L EA + LD + ++ T+ L+++ G++
Sbjct: 40 TKKKEPNIIPDEQFDY-LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIH 98
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
+ +L +PD+F L+ Y I A + +SM +R N+ ++S +I
Sbjct: 99 LGR-ILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMI 153
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
+ E LF M ++PD + ++ G G + + + G
Sbjct: 154 GAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMS 213
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ NS+L V K +D A ++MR++ DV+ +N ++ C+ G+ + A E+
Sbjct: 214 SCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVEL 269
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+++ +G + T+NI+I G + G D A+ L+ +ME G D T+ +I L
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 481 KGDNYKAEKLLREMMARGLL 500
G Y+A + R+M G++
Sbjct: 330 NGMRYQALDMFRKMFLAGVV 349
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 154/374 (41%), Gaps = 76/374 (20%)
Query: 52 TSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGL-CLK-----GEVRR---A 102
T+ +I G A + K+ G P+AVT+ + + CLK EV
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 103 LQFHDDVVARGFRLNQVS----------------------YGTLIKGLCRMGQTRASLQL 140
+ F DDV+ ++ S + ++I G C+ G + +L
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK-KVSPDVVTYNSLLYGFC 199
+++ ++PN++ +NT+I K+ +A +LF M KV + T+N ++ G+
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITF--------------------------------- 226
G+ EA EL +M P+ +T
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHA 560
Query: 227 --NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
N L D K G+++ ++ + M + D+ T+NSL+ GY L A+A+ N M
Sbjct: 561 VKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQM 616
Query: 285 AQRGVTPNVHSYSIII--HGLCKNKMVDEALNLFAEMEC-IKIIPDTITYSSLIDGLCKS 341
+G+TPN + S II HGL N VDE +F + IIP S+++ ++
Sbjct: 617 KTQGITPNRGTLSSIILAHGLMGN--VDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRA 674
Query: 342 GRISHAWELVDEMH 355
R+ A + + EM+
Sbjct: 675 NRLEEALQFIQEMN 688
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 121/295 (41%), Gaps = 44/295 (14%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARG-FRLNQVS 120
G A+ + ++ RP+ +T T+I G G+ A+ + G + N +
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVV-------------------------- 154
+ +I G + G+ +L+L R+++ PN V
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 155 ---------MYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
+ N + D+ K + + +F M K D++T+NSL+ G+ + G
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYG 607
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL-AVMMKQGVKPDLFTYNSL 264
A L ++M + I P+ T ++++ A G GNV E K V ++ + P L +++
Sbjct: 608 PALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAM 667
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSY--SIIIHGLCKNKMVDEALNLFA 317
+ Y N + +A+ + M + TP S+ IHG + + A NLF+
Sbjct: 668 VYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDI-DMAIHAAENLFS 721
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 213/468 (45%), Gaps = 25/468 (5%)
Query: 40 DDAISIF------NRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGL 93
DDA +F N + + ++ G+ A + + K+G P VT++T +
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 94 CLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNV 153
G V Q H + G L+ + +L+ C++G ++ V + + +V
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL----IEYAEMVFDRMFEKDV 340
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
V +N II + LV DA + M ++K+ D VT +L+ LK E+
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY 400
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
R + D++ +T++D K G++ +AK V V+ DL +N+L+ Y
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF----DSTVEKDLILWNTLLAAYAESGL 456
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+A+ + M GV PNV ++++II L +N VDEA ++F +M+ IIP+ I++++
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC--KSHHVDKAI--ALTKKM 389
+++G+ ++G A + +M G + F+ L S H+ + I + + +
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ + V L+D K G + A++VF + ++ N MI+ G
Sbjct: 577 QHSSL---VSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGNL 629
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
EA+AL +E G PD IT ++ A GD +A ++ +++++
Sbjct: 630 KEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 216/484 (44%), Gaps = 61/484 (12%)
Query: 42 AISIFN-----RLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLK 96
AI+I N +LGTS + G I A V ++ +K D VT +I G +
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQ 353
Query: 97 GEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE----GHLVKPN 152
G V A+ + + + V+ TL+ R +L+L ++V+ H + +
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAART----ENLKLGKEVQCYCIRHSFESD 409
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
+V+ +T++D K + DA +F V K D++ +N+LL + G EA L
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFY 465
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
M + + P+VIT+N ++ +L + G V EAK++ M G+ P+L ++ ++M+G
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY- 331
+AI L M + G+ PN S ++ AL+ A + + I Y
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITV-------------ALSACAHLASLHIGRTIHGYI 572
Query: 332 -------------SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHH 378
+SL+D K G I+ A ++ P N+++ +
Sbjct: 573 IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGN 628
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK-GYHVTVRTYN 437
+ +AIAL + + G++PD +T ++ G + A E+F D+V K + Y
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYG 688
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
+M++ L G ++AL L+ EM K PDA ++++ + N + + L + ++R
Sbjct: 689 LMVDLLASAGETEKALRLIEEMPFK---PDARMIQSLVASC-----NKQRKTELVDYLSR 740
Query: 498 GLLE 501
LLE
Sbjct: 741 KLLE 744
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/547 (21%), Positives = 216/547 (39%), Gaps = 118/547 (21%)
Query: 61 FGQIPS--AFSVLGKILKK-----GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARG 113
F IP+ FSV K K + P + + + LC GE++ AL ++ R
Sbjct: 6 FNTIPNKVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRN 65
Query: 114 FRLNQVSYGTLIKG------LCRMGQTRA---------------------------SLQL 140
R+ YG +++G L Q A +L++
Sbjct: 66 LRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEI 125
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD------------- 187
+ L NV + II C+ L A F EM+ ++ PD
Sbjct: 126 AEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGA 185
Query: 188 ----------------------VVTYNSL--LYGFCIVGQLKEATELLDE---------- 213
V +SL +YG C G L +A+++ DE
Sbjct: 186 LKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC--GVLDDASKVFDEIPDRNAVAWN 243
Query: 214 ---------------------MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
M ++ + P +T +T + A G V+E K A+ +
Sbjct: 244 ALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
G++ D SL++ YC V I A + + M ++ V ++++II G + +V++A
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV----TWNLIISGYVQQGLVEDA 359
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
+ + M K+ D +T ++L+ ++ + E+ +D ++++D+
Sbjct: 360 IYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDM 419
Query: 373 LCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
K + A KK+ D ++ D++ +N L+ + G A +F + ++G
Sbjct: 420 YAKCGSIVDA----KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPN 475
Query: 433 VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLR 492
V T+N++I L + G DEA + +M+ G IP+ I++ T++ + + G + +A LR
Sbjct: 476 VITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLR 535
Query: 493 EMMARGL 499
+M GL
Sbjct: 536 KMQESGL 542
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 5/295 (1%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC----KDKLVSDAFNLF 176
Y LI + + GQTR ++ L +++ +P+ +YN +I + K K +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 177 SEMV-VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
+M +++ P+VVTYN LL F G++ + L ++ + PDV TFN ++DA GK
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G +KE + VL M KPD+ T+N L+D Y E K S+ + P + +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
++ +I K +M+D+A +F +M + IP ITY +I G +S A E+ +E+
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
+ T N++L+V C++ +A L + PD TY L K
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 150/332 (45%), Gaps = 15/332 (4%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
++ Y PD + LI + KG+ R A+ ++ G R + Y LI TR
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL---HTR 182
Query: 136 ASLQLLRQVEGHLVK--------PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
+ L +V G+L K PNVV YN ++ + + V LF ++ + VSPD
Sbjct: 183 DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPD 242
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
V T+N ++ + G +KE +L M PD+ITFN L+D+ GK+ ++ +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 248 VMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS--IIIHGLCK 305
+M+ KP L T+NS++ Y I+KA + M P+ +Y I+++G C
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+ V A +F E+ + T +++++ C++G A +L D T
Sbjct: 363 S--VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAST 420
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPD 397
Y L K+ ++ L KKM GI P+
Sbjct: 421 YKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 146/322 (45%), Gaps = 9/322 (2%)
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA-LGKEGNVKEAKN 244
PD Y+ L+ GQ + A L EM PD +N L+ A L K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 245 VLAVMMK-QGV---KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
V + K +G+ +P++ TYN L+ + ++++ A+ + V+P+V++++ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
KN M+ E + M + PD IT++ LID K + + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN--ILMDGLCKEGRLKNAQ 418
T+NS++ K+ +DKA + KKM D P +TY I+M G C G + A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
E+F+++ + T N M+ C+ GL+ EA L PDA T++ + A
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 479 FEKGDNYKAEKLLREMMARGLL 500
+ + + L+++M G++
Sbjct: 429 TKADMKEQVQILMKKMEKDGIV 450
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 6/272 (2%)
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVK-PDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
L + LGK + V M KQ PD Y+ L+ + A+ + + M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 288 GVTPNVHSYSIII----HGLCKNKMVDEALNLFAEMECI-KIIPDTITYSSLIDGLCKSG 342
G P+ Y+ +I H K K +++ +M+ I + P+ +TY+ L+ +SG
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
++ L ++ D +T+N ++D K+ + + A+ +MR +PD++T+N
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
+L+D K+ + ++ F+ L+ T+ T+N MI K + D+A + +M D
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 463 GCIPDAITFETIICALFEKGDNYKAEKLLREM 494
IP IT+E +I G +A ++ E+
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 140/326 (42%), Gaps = 5/326 (1%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE- 209
P+ +Y+ +I + K A LFSEM PD YN+L+ +A E
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 210 ---LLDEMTR-KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
LD+M + P+V+T+N L+ A + G V + + + V PD++T+N +M
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
D Y I + A+L M P++ +++++I K + ++ F + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
P T++S+I K+ I A + +M++ TY ++ + V +A +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
+++ + T N +++ C+ G A ++F + H TY + K
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 446 EGLFDEALALLSEMEDKGCIPDAITF 471
+ ++ L+ +ME G +P+ F
Sbjct: 431 ADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 134/324 (41%), Gaps = 19/324 (5%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF------- 114
GQ A + ++ G RPDA LI + +AL+ RG+
Sbjct: 147 GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE-----KVRGYLDKMKGI 201
Query: 115 ---RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
+ N V+Y L++ + G+ L + ++ V P+V +N ++D+ K+ ++ +
Sbjct: 202 ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
+ + M + PD++T+N L+ + + ++ + + R P + TFN+++
Sbjct: 262 MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS--LMDGYCLVNEINKAIAILNSMAQRGV 289
GK + +A+ V M P TY +M GYC +++A I + +
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDR 379
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
+ + ++ C+N + EA LF ++ PD TY L K+
Sbjct: 380 VLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQI 439
Query: 350 LVDEMHNKGQPADKFTYNSLLDVL 373
L+ +M G +K + L+V
Sbjct: 440 LMKKMEKDGIVPNKRFFLEALEVF 463
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 150/289 (51%), Gaps = 6/289 (2%)
Query: 165 KDKLVSDAFNLFSEMVVKKVSP-DVVTYNSLLYGFCIVGQLKEATELLDEM--TRKNIGP 221
K +SDA +LF+ + P D+ +NS+L + + + + +L + ++ N P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 222 DVITFNTLVD--ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
TF L+ + ++ VL +M+ G++PD T + + C +++A
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGL 338
++ + ++ P+ ++Y+ ++ LCK K + EM + + PD ++++ LID +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
C S + A LV ++ N G D F YN+++ C +A+ + KKM+++G++PD
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
+TYN L+ GL K GR++ A+ + +V GY TY ++NG+C++G
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 27 FHSHSLSP--SIHNADDAISIFNRLLGTSPT--PSIIEF------------GQIPSAFSV 70
FH+ L SI +D + +F +L + P P F I + V
Sbjct: 87 FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRV 146
Query: 71 LGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCR 130
L ++ G PD VT ++ LC G V A ++ + + +Y L+K LC+
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 131 MGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ + ++ VKP++V + +ID++C K + +A L S++ PD
Sbjct: 207 CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
YN+++ GFC + + EA + +M + + PD IT+NTL+ L K G V+EA+ L M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 250 MKQGVKPDLFTYNSLMDGYC 269
+ G +PD TY SLM+G C
Sbjct: 327 VDAGYEPDTATYTSLMNGMC 346
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 12/273 (4%)
Query: 235 KEGNVKEAKNVLAVMMKQGVKP-DLFTYNSLMDGYCLVNEINKAIAILNSM--AQRGVTP 291
K N+ +AK++ + P DL +NS++ Y + +N + + + +Q P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 292 NVHSYSIIIHGLCKN-----KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
++ I++ C+ V LNL M + PD +T + LC++GR+
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ-GIQPDVVTYNILM 405
A +L+ E+ K P D +TYN LL LCK + +MRD ++PD+V++ IL+
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
D +C L+ A + L G+ YN ++ G C EA+ + +M+++G
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREMMARG 498
PD IT+ T+I L + G +A L+ M+ G
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 1/182 (0%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR-GFR 115
S+ E G++ A ++ ++ +K PD T L+K LC ++ +F D++ +
Sbjct: 168 SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 227
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
+ VS+ LI +C R ++ L+ ++ KP+ +YNTI+ C S+A +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
+ +M + V PD +TYN+L++G G+++EA L M PD T+ +L++ + +
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 236 EG 237
+G
Sbjct: 348 KG 349
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 5/295 (1%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC----KDKLVSDAFNLF 176
Y LI + + GQTR ++ L +++ +P+ +YN +I + K K +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 177 SEMV-VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
+M +++ P+VVTYN LL F G++ + L ++ + PDV TFN ++DA GK
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
G +KE + VL M KPD+ T+N L+D Y E K S+ + P + +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
++ +I K +M+D+A +F +M + IP ITY +I G +S A E+ +E+
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
+ T N++L+V C++ +A L + PD TY L K
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 150/332 (45%), Gaps = 15/332 (4%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
++ Y PD + LI + KG+ R A+ ++ G R + Y LI TR
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL---HTR 182
Query: 136 ASLQLLRQVEGHLVK--------PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
+ L +V G+L K PNVV YN ++ + + V LF ++ + VSPD
Sbjct: 183 DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPD 242
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
V T+N ++ + G +KE +L M PD+ITFN L+D+ GK+ ++ +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 248 VMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS--IIIHGLCK 305
+M+ KP L T+NS++ Y I+KA + M P+ +Y I+++G C
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+ V A +F E+ + T +++++ C++G A +L D T
Sbjct: 363 S--VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAST 420
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPD 397
Y L K+ ++ L KKM GI P+
Sbjct: 421 YKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 146/322 (45%), Gaps = 9/322 (2%)
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA-LGKEGNVKEAKN 244
PD Y+ L+ GQ + A L EM PD +N L+ A L K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 245 VLAVMMK-QGV---KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
V + K +G+ +P++ TYN L+ + ++++ A+ + V+P+V++++ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
KN M+ E + M + PD IT++ LID K + + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN--ILMDGLCKEGRLKNAQ 418
T+NS++ K+ +DKA + KKM D P +TY I+M G C G + A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
E+F+++ + T N M+ C+ GL+ EA L PDA T++ + A
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 479 FEKGDNYKAEKLLREMMARGLL 500
+ + + L+++M G++
Sbjct: 429 TKADMKEQVQILMKKMEKDGIV 450
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 6/272 (2%)
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVK-PDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
L + LGK + V M KQ PD Y+ L+ + A+ + + M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 288 GVTPNVHSYSIII----HGLCKNKMVDEALNLFAEMECI-KIIPDTITYSSLIDGLCKSG 342
G P+ Y+ +I H K K +++ +M+ I + P+ +TY+ L+ +SG
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
++ L ++ D +T+N ++D K+ + + A+ +MR +PD++T+N
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
+L+D K+ + ++ F+ L+ T+ T+N MI K + D+A + +M D
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 463 GCIPDAITFETIICALFEKGDNYKAEKLLREM 494
IP IT+E +I G +A ++ E+
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 140/326 (42%), Gaps = 5/326 (1%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE- 209
P+ +Y+ +I + K A LFSEM PD YN+L+ +A E
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 210 ---LLDEMTR-KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
LD+M + P+V+T+N L+ A + G V + + + V PD++T+N +M
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKII 325
D Y I + A+L M P++ +++++I K + ++ F + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
P T++S+I K+ I A + +M++ TY ++ + V +A +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 386 TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
+++ + T N +++ C+ G A ++F + H TY + K
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 446 EGLFDEALALLSEMEDKGCIPDAITF 471
+ ++ L+ +ME G +P+ F
Sbjct: 431 ADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 134/324 (41%), Gaps = 19/324 (5%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF------- 114
GQ A + ++ G RPDA LI + +AL+ RG+
Sbjct: 147 GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE-----KVRGYLDKMKGI 201
Query: 115 ---RLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
+ N V+Y L++ + G+ L + ++ V P+V +N ++D+ K+ ++ +
Sbjct: 202 ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
+ + M + PD++T+N L+ + + ++ + + R P + TFN+++
Sbjct: 262 MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS--LMDGYCLVNEINKAIAILNSMAQRGV 289
GK + +A+ V M P TY +M GYC +++A I + +
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDR 379
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
+ + ++ C+N + EA LF ++ PD TY L K+
Sbjct: 380 VLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQI 439
Query: 350 LVDEMHNKGQPADKFTYNSLLDVL 373
L+ +M G +K + L+V
Sbjct: 440 LMKKMEKDGIVPNKRFFLEALEVF 463
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 208/469 (44%), Gaps = 50/469 (10%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G A + ++ G + T+ L++ K Q H V+ G N
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+LI R G+ L+L R+V + N+ +N+I+ S K V DA L EM +
Sbjct: 128 NSLIVMYSRNGK----LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ PD+VT+NSLL G+ G K+A +L M + P + ++L+ A+ + G++K
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
K + +++ + D++ +L+D Y + A + + M + N+ +++ ++
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVS 299
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
GL ++ +A L ME I PD IT++SL G G+ A +++ +M KG
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD--------------- 406
+ ++ ++ K+ + A+ + KM+++G+ P+ T + L+
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 407 GLC--------------------KEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
G C K G L++A E+F + K ++ ++N M+ G
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SLASWNCMLMGYAMF 475
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKG---DNYKAEKLLR 492
G +E +A S M + G PDAITF +++ G + +K L+R
Sbjct: 476 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMR 524
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 197/474 (41%), Gaps = 80/474 (16%)
Query: 72 GKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM 131
G +L+ G + +LI G++ + + + + R N S+ +++ ++
Sbjct: 113 GYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKL 168
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
G ++ LL ++E +KP++V +N+++ L DA + M + + P +
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG---------NVKEA 242
+SLL G LK + + R + DV TL+D K G ++ +A
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 243 KNVLAV----------------------MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI 280
KN++A M K+G+KPD T+NSL GY + + KA+ +
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 281 LNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL------ 334
+ M ++GV PNV S++ I G KN AL +F +M+ + P+ T S+L
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 408
Query: 335 ---------IDGLC--------------------KSGRISHAWELVDEMHNKGQPADKFT 365
+ G C KSG + A E+ + NK +
Sbjct: 409 LSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----S 464
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
+N +L ++ IA M + G++PD +T+ ++ +CK L + DL+
Sbjct: 465 WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS-VCKNSGLVQEGWKYFDLM 523
Query: 426 IKGYHV--TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
Y + T+ + M++ L + G DEA + M K PDA + + +
Sbjct: 524 RSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK---PDATIWGAFLSS 574
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 179/421 (42%), Gaps = 64/421 (15%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ A +++ ++ K+G +PDA+T +L G G+ +AL + +G N VS+
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL-CKDKLVSDAFNLFSEMVVK 182
+ G + G R +L++ +++ V PN +T++ L C L S K
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG----------K 416
Query: 183 KVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+V +GFC+ RKN+ D LVD GK G+++ A
Sbjct: 417 EV-----------HGFCL---------------RKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 243 KNVLAVMMKQGVK-PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
+ G+K L ++N ++ GY + + IA + M + G+ P+ +++ ++
Sbjct: 451 IEIF-----WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL- 504
Query: 302 GLCKNK-MVDEALNLFAEMEC-IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
+CKN +V E F M IIP S ++D L +SG + AW+ + M K
Sbjct: 505 SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK-- 562
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP-DVVTYNILMDGLCKEGRLKNAQ 418
D + + L CK H D +A R Q ++P + Y ++++ R ++ +
Sbjct: 563 -PDATIWGAFLSS-CKIHR-DLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVE 619
Query: 419 EV----------FQDLVIK-GYHVTVRTYNIMINGLCKEG-LFDEALALLSEMEDKGCIP 466
+ QDL TV + EG ++ E L+SEM+ G +P
Sbjct: 620 RIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVP 679
Query: 467 D 467
D
Sbjct: 680 D 680
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 39/359 (10%)
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A LF EM + D + +N ++ G ++A EL EM T L+
Sbjct: 42 ANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ E + + +++ G++ ++ NSL+ Y ++ + + NSM R
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR---- 153
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
N+ S++ I+ K VD+A+ L EME + PD +T++SL+ G G A ++
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK-MRDQ------------------ 392
M G + +SLL + + H+ A+ +R+Q
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 393 GIQP------------DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
G P ++V +N L+ GL LK+A+ + + +G T+N +
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+G G ++AL ++ +M++KG P+ +++ I + G+ A K+ +M G+
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 184/385 (47%), Gaps = 15/385 (3%)
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI---IDSLCKDKL 168
+G+ + Y ++I L +M + + L+ ++ P++V T+ I C
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHD 212
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP-DVITFN 227
V A N F K+ + + SLL C + +A L+ K+ P D +FN
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 270
Query: 228 TLVDALGKE-GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
+++ G+ +EA+ V M GVK D+ +Y+S++ Y +NK + + + M +
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK-IIPDTITYSSLIDGLCKSGRIS 345
+ P+ Y+ ++H L K V EA NL ME K I P+ +TY+SLI LCK+ +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
A ++ DEM KG TY++ + +L V + +A KMR G +P V TY +L+
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLA---KMRKMGCEPTVETYIMLI 447
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
LC+ N ++ ++ K + +Y +MI+GL G +EA EM+DKG
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
Query: 466 PDAITFETIICALFEKGDNYKAEKL 490
P+ E +I + F G Y +++
Sbjct: 508 PNE-NVEDMIQSWFS-GKQYAEQRI 530
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL---YGFCIVGQLKEAT 208
+V Y+++I L K + A+ L EM +K SP +V +LL +C V + +A
Sbjct: 160 SVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAI 217
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
R + + F +L+ AL + NV +A + L K D ++N +++G+
Sbjct: 218 NTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGH-LIFCNKDKYPFDAKSFNIVLNGW 276
Query: 269 C-LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM--ECIKII 325
C ++ +A + M GV +V SYS +I K +++ L LF M ECI+
Sbjct: 277 CNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIE-- 334
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMHN-KGQPADKFTYNSLLDVLCKSHHVDKAIA 384
PD Y++++ L K+ +S A L+ M KG + TYNSL+ LCK+ ++A
Sbjct: 335 PDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK----GYHVTVRTYNIMI 440
+ +M ++G+ P + TY+ M L + +EVF+ L+ K G TV TY ++I
Sbjct: 395 VFDEMLEKGLFPTIRTYHAFMRIL------RTGEEVFE-LLAKMRKMGCEPTVETYIMLI 447
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
LC+ FD L L EM++K PD ++ +I LF G +A +EM +G+
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
+KG P+ VT +LIK LC + A Q D+++ +G +Y ++ L R G+
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE-- 422
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+LL ++ +P V Y +I LC+ + + L+ EM K V PD+ +Y ++
Sbjct: 423 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPD 222
+G + G+++EA EM K + P+
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDKGMRPN 509
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 206/436 (47%), Gaps = 30/436 (6%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A V +++ G + TL++ +K GEVR FH V+ GF N TL
Sbjct: 147 ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM-VVKKVS 185
G R + R+V + +P+V+ + ++ + K+ L +A LF M K +
Sbjct: 207 ---LYGVNREPVDA-RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLV 262
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
PD T+ ++L + +LK+ E+ ++ IG +V+ ++L+D GK G+V+EA+ V
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH---G 302
M K+ + ++++L+ GYC E KAI I M ++ +++ + ++ G
Sbjct: 323 FNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAG 374
Query: 303 LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPAD 362
L ++ E + C + I S+LID KSG I A +++K +
Sbjct: 375 LAAVRLGKEIHGQYVRRGC---FGNVIVESALIDLYGKSGCIDSA----SRVYSKMSIRN 427
Query: 363 KFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
T+N++L L ++ ++A++ M +GI+PD +++ ++ G + + F
Sbjct: 428 MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFV 487
Query: 423 DLVIKGYHVTVRT--YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
L+ K Y + T Y+ MI+ L + GLF+EA LL E C DA + ++
Sbjct: 488 -LMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAE---CRNDASLWGVLLGPCAA 543
Query: 481 KGDNYK-AEKLLREMM 495
D + AE++ + MM
Sbjct: 544 NADASRVAERIAKRMM 559
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 21/210 (10%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G + A V + KK ++V+ + L+ G C GE +A++ ++ + + +
Sbjct: 314 GSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCF 365
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVK----PNVVMYNTIIDSLCKDKLVSDAFNLFS 177
GT++K + A+++L +++ G V+ NV++ + +ID K + A ++S
Sbjct: 366 GTVLKACAGL----AAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYS 421
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
+M ++ +++T+N++L G+ +EA ++M +K I PD I+F ++ A G G
Sbjct: 422 KMSIR----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 238 NVKEAKNVLAVMMKQ-GVKPDLFTYNSLMD 266
V E +N +M K G+KP Y+ ++D
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMID 507
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/434 (19%), Positives = 177/434 (40%), Gaps = 72/434 (16%)
Query: 128 LCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL-FSEMVVK---- 182
LC++GQ ++++L + +Y +++ + +K+ S + F VVK
Sbjct: 36 LCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTC--NKVFSFIHGIQFHAHVVKSGLE 93
Query: 183 --------------KVSP---------------DVVTYNSLLYGFCIVGQLKEATELLDE 213
K+ P D +++ S++ G+ + +A E+ E
Sbjct: 94 TDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVE 153
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
M + + T ++ V A + G V+ + V++ G + + F ++L Y + E
Sbjct: 154 MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNRE 213
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK-IIPDTITYS 332
A + + M + P+V ++ ++ KN + +EAL LF M K ++PD T+
Sbjct: 214 PVDARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFG 269
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
+++ R+ E+ ++ G ++ +SLLD+ K V +A + M
Sbjct: 270 TVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-- 327
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH------------VTVRTYNIMI 440
+ + V+++ L+ G C+ G + A E+F+++ K + VR +
Sbjct: 328 --KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIH 385
Query: 441 NGLCKEGLFDEAL---ALLSEMEDKGCIPDA------------ITFETIICALFEKGDNY 485
+ G F + AL+ GCI A IT+ ++ AL + G
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGE 445
Query: 486 KAEKLLREMMARGL 499
+A +M+ +G+
Sbjct: 446 EAVSFFNDMVKKGI 459
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 163/332 (49%), Gaps = 2/332 (0%)
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
+LR V+ + + +Y T+I S K V F +F +M V ++ T+ +L+ G
Sbjct: 489 VLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCA 548
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG--VKPD 257
GQ+ +A + KN+ PD + FN L+ A G+ G V A +VLA M + + PD
Sbjct: 549 RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPD 608
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
+ +LM C ++ +A + + + G+ Y+I ++ K+ D A +++
Sbjct: 609 HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYK 668
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
+M+ + PD + +S+LID + + A+ ++ + ++G +Y+SL+ C +
Sbjct: 669 DMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAK 728
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
KA+ L +K++ ++P + T N L+ LC+ +L A E ++ G TY+
Sbjct: 729 DWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYS 788
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
+++ ++ F+ + LLS+ + G P+ I
Sbjct: 789 MLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 167/370 (45%), Gaps = 8/370 (2%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA 102
+S FN L+ + IE A VL + + G D TTLI G+V
Sbjct: 467 MSTFNMLMSVCASSQDIE-----GARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAM 521
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDS 162
+ + G N ++G LI G R GQ + + VKP+ V++N +I +
Sbjct: 522 FEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 163 LCKDKLVSDAFNLFSEMVVKK--VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG 220
+ V AF++ +EM + + PD ++ +L+ C GQ++ A E+ + + I
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 221 PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI 280
+ V++ K G+ A ++ M ++ V PD +++L+D +++A I
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 281 LNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
L +G+ SYS ++ C K +AL L+ +++ IK+ P T ++LI LC+
Sbjct: 702 LQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCE 761
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVT 400
++ A E +DE+ G + TY+ L+ + + + L + + G+ P+++
Sbjct: 762 GNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIM 821
Query: 401 YNILMDGLCK 410
+ LCK
Sbjct: 822 CRCIT-SLCK 830
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 183/411 (44%), Gaps = 44/411 (10%)
Query: 128 LCRMGQTRASLQLLRQVEGH-LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
L R G+ + + LL ++ L+ + + + + + K + V +AF F+++++ +P
Sbjct: 410 LLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFR-FTKLIL---NP 465
Query: 187 DVVTYNSLLYGFCIVGQ-LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
+ T+N +L C Q ++ A +L + + D + TL+ + K G V V
Sbjct: 466 TMSTFN-MLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M GV+ +L T+ +L+DG ++ KA + + V P+ ++ +I +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 306 NKMVDEALNLFAEM--ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN---KGQP 360
+ VD A ++ AEM E I PD I+ +L+ C +G++ A E+ +H +G P
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 361 --------------------------------ADKFTYNSLLDVLCKSHHVDKAIALTKK 388
D+ +++L+DV + +D+A + +
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
+ QGI+ ++Y+ LM C K A E+++ + T+ T N +I LC+
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+A+ L E++ G P+ IT+ ++ A K D + KLL + G+
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGV 815
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 62 GQIPSAFSVLGKILKKGY--RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
G + AF VL ++ + + PD +++ L+K C G+V RA + + + G R
Sbjct: 586 GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
Y + + G + + + ++ V P+ V ++ +ID K++ +AF + +
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ + ++Y+SL+ C K+A EL +++ + P + T N L+ AL + +
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+A L + G+KP+ TY+ LM ++ + +L+ GV+PN+ I
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCI 825
Query: 300 IHGLCKNKM 308
LCK +
Sbjct: 826 T-SLCKRRF 833
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 165/372 (44%), Gaps = 1/372 (0%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
SY +++ L R + +L+ + V P++ +DS + V A LF E
Sbjct: 153 SYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEES 212
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
V ++N+LL C + A + + + NI D ++N ++ K G V
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+E + VL M++ G PD +Y+ L++G IN ++ I +++ +G P+ + Y+ +
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I + DE++ + M + P+ TYS L+ GL K ++S A E+ +EM ++G
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
S L LC A+ + +K R G + Y +L+ L + G+
Sbjct: 392 LPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLN 451
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
V+ ++ GY V Y +++GLC G + A+ ++ E KG P+ + + L
Sbjct: 452 VWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLM 511
Query: 480 EKGDNYKAEKLL 491
A KL
Sbjct: 512 ASNKTELAYKLF 523
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 158/352 (44%), Gaps = 3/352 (0%)
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
V +V Y+ I+ +L + KL S ++ MV + V+PD+ + F V ++ A
Sbjct: 147 VTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAI 206
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP-DLFTYNSLMDG 267
EL +E + +FN L+ L + +V AK+V K+G P D +YN ++ G
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISG 264
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
+ + E+ + +L M + G P+ SYS +I GL + +++++ +F ++ +PD
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPD 324
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
Y+++I + + M ++ + TY+ L+ L K V A+ + +
Sbjct: 325 ANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE 384
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
+M +G+ P + LC G A ++Q G ++ Y +++ L + G
Sbjct: 385 EMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
L + EM++ G D +E I+ L G A ++ E M +G
Sbjct: 445 KCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 136/290 (46%), Gaps = 20/290 (6%)
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
D + R N+ + + T D +E V + +V+++ + LF++ +MD
Sbjct: 122 DVLNRGNLSGEAMV--TFFDWAVREPGVTKDVGSYSVILRALGRRKLFSF--MMD----- 172
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+L M GV P++ +I + + V A+ LF E E + T ++
Sbjct: 173 --------VLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESF 224
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQ-PADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
++L+ LC+ +S A + + KG P D +YN ++ K V++ + K+M
Sbjct: 225 NALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+ G PD ++Y+ L++GL + GR+ ++ E+F ++ KG YN MI FD
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
E++ M D+ C P+ T+ ++ L + A ++ EM++RG+L
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVL 392
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 150/362 (41%), Gaps = 40/362 (11%)
Query: 68 FSVLGKILK----KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
FS + +LK +G PD LT + VRRA++ ++ + G + + S+
Sbjct: 167 FSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNA 226
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
L++ LC A+ + +G+ + + YN +I K V + + EMV
Sbjct: 227 LLRCLCERSHVSAAKSVFNAKKGN-IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESG 285
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
PD ++Y+ L+ G G++ ++ E+ D + K PD +N ++ + E+
Sbjct: 286 FGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESM 345
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV---------- 293
M+ + +P+L TY+ L+ G +++ A+ I M RGV P
Sbjct: 346 RYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPL 405
Query: 294 -------------------------HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
+Y +++ L + LN++ EM+ D
Sbjct: 406 CSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDV 465
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
Y ++DGLC G + +A +++E KG ++F Y+ L L S+ + A L K
Sbjct: 466 EVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLK 525
Query: 389 MR 390
++
Sbjct: 526 IK 527
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 9/284 (3%)
Query: 42 AISIFNRLLGTSPTPS---------IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKG 92
A S+FN G P S + G++ VL ++++ G+ PD ++ + LI+G
Sbjct: 240 AKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEG 299
Query: 93 LCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN 152
L G + +++ D++ +G + Y +I S++ R++ +PN
Sbjct: 300 LGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPN 359
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
+ Y+ ++ L K + VSDA +F EM+ + V P S L C G A +
Sbjct: 360 LETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQ 419
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
+ + + L+ L + G NV M + G D+ Y ++DG C++
Sbjct: 420 KSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIG 479
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
+ A+ ++ ++G PN YS + L + + A LF
Sbjct: 480 HLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 149/335 (44%), Gaps = 3/335 (0%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
K N YN I K +LF EM + T+ ++ + G A
Sbjct: 675 KHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIR 734
Query: 210 LLDEMTRKNIGPDVITFNTLVDAL--GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
EM + P TF L+ L K NV+EA M++ G PD +
Sbjct: 735 TFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGC 794
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
C V A + L+S+ + G P +YSI I LC+ ++EAL+ A E + + D
Sbjct: 795 LCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLD 853
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
TY S++ GL + G + A + V+ M G Y SL+ K ++K + +
Sbjct: 854 QYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQ 913
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
KM + +P VVTY ++ G G+++ A F+++ +G +TY+ IN LC+
Sbjct: 914 KMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQAC 973
Query: 448 LFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
++AL LLSEM DKG P I F T+ L +G
Sbjct: 974 KSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREG 1008
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 171/362 (47%), Gaps = 8/362 (2%)
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
+L+ ++E + ++ + +I K K + +F +M D YN ++
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK--QGVKP 256
CI G+ A E EM K I + T+ L+D + K V +++ M++ + +
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEH 329
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK-NKMVDEALNL 315
D F Y L+ +C+ +I +A+ ++ + + + + + I++ GLC+ N+MVD AL +
Sbjct: 330 DAFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD-ALEI 386
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
M+ K+ D+ Y +I G + +S A E + + G+P TY ++ L K
Sbjct: 387 VDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
+K L +M + GI+PD V ++ G + R+ A +VF + KG T ++
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
Y+I + LC+ +DE + + ++M + F +I ++ + G+ K L++E+
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIH-LIKEIQ 564
Query: 496 AR 497
R
Sbjct: 565 KR 566
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 161/336 (47%), Gaps = 3/336 (0%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
++ ++ K G D T T LI ++ + L + + GF L+ +Y +I+ LC
Sbjct: 211 LVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLC 270
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
G+ +L+ +++ + + Y ++D + K + V ++ +MV +
Sbjct: 271 IAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHD 330
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
+ LL FC+ G++KEA EL+ E+ K + D F LV L + + +A ++ +M
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
++ + D Y ++ GY N+++KA+ + + G P V +Y+ I+ L K K
Sbjct: 391 KRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
++ NLF EM I PD++ ++++ G R++ AW++ M KG +Y+
Sbjct: 450 EKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIF 509
Query: 370 LDVLCKSHHVDKAIALTKKMRDQG--IQPDVVTYNI 403
+ LC+S D+ I + +M I+ D+ ++ I
Sbjct: 510 VKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVI 545
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 146/318 (45%), Gaps = 7/318 (2%)
Query: 185 SPDVVTYNSLLYGFCIVGQLKE---ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
S V YN++L I G+ + EL+ EM + D+ T+ L+ GK + +
Sbjct: 186 SHRVGIYNTML---SIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGK 242
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
V M K G + D YN ++ C+ + A+ M ++G+T + +Y +++
Sbjct: 243 GLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 302
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
+ K++ VD ++ +M I I + + L+ C SG+I A EL+ E+ NK
Sbjct: 303 CIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
D + L+ LC+++ + A+ + M+ + + D Y I++ G ++ + A E F
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQF 421
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+ + G V TY ++ L K F++ L +EM + G PD++ ++ +
Sbjct: 422 EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQ 481
Query: 482 GDNYKAEKLLREMMARGL 499
+A K+ M +G+
Sbjct: 482 NRVAEAWKVFSSMEEKGI 499
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 193/464 (41%), Gaps = 49/464 (10%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+I A ++ ++ K DA L+KGLC + AL+ D + R + V Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-Y 401
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
G +I G R +L+ ++ P V Y I+ L K K NLF+EM+
Sbjct: 402 GIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIE 461
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ PD V +++ G ++ EA ++ M K I P +++ V L + E
Sbjct: 462 NGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521
Query: 242 AKNVLAVM--MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH----- 294
+ M K ++ D+F++ +++SM + G +H
Sbjct: 522 IIKIFNQMHASKIVIRDDIFSW------------------VISSMEKNGEKEKIHLIKEI 563
Query: 295 -----SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL-------IDGLCKSG 342
SY ++G K + E L + C +++ + +L + +C+
Sbjct: 564 QKRSNSYCDELNGSGKAEFSQEE-ELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVL 622
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA--LTKKMRDQGIQPDVVT 400
S WE E K +FT +++VL + A+ + + G + +
Sbjct: 623 SSSRDWERTQEALEKSTV--QFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEA 680
Query: 401 YN--ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
YN I + G K+ K + +F ++ +G +T T+ IMI + GL + A+ E
Sbjct: 681 YNMSIKVAGCGKD--FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKE 738
Query: 459 MEDKGCIPDAITFETIICALFE-KGDNY-KAEKLLREMMARGLL 500
M+D G IP + TF+ +I L E KG N +A + REM+ G +
Sbjct: 739 MKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFV 782
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 78 GYRPDAVTLTTLIKGLCLKG--EVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
G P + T LI LC K V A + +++ GF ++ + LC +G T+
Sbjct: 743 GLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTK 802
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+ L + G + P V Y+ I +LC+ + +A + + ++ D TY S++
Sbjct: 803 DAKSCLDSL-GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIV 861
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
+G G L++A + ++ M P V + +L+ KE +++ M + +
Sbjct: 862 HGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCE 921
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P + TY +++ GY + ++ +A +M +RG +P+ +YS I+ LC+ ++AL L
Sbjct: 922 PSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKL 981
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGR 343
+EM I P TI + ++ GL + G+
Sbjct: 982 LSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 143/358 (39%), Gaps = 48/358 (13%)
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
E+VV+ + + N++L F VG+ R + +N + G
Sbjct: 645 ELVVEVLRHAKIQGNAVLRFFSWVGK------------RNGYKHNSEAYNMSIKVAGCGK 692
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+ K+ +++ M +QG T+ ++ Y N AI M G+ P+ ++
Sbjct: 693 DFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFK 752
Query: 298 IIIHGLC--KNKMVDEALNLFAEMECIKIIPD---------------------------- 327
+I LC K + V+EA F EM +PD
Sbjct: 753 CLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLG 812
Query: 328 ------TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
T+ YS I LC+ G++ A + + D++TY S++ L + + K
Sbjct: 813 KIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQK 872
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
A+ M++ G +P V Y L+ KE +L+ E Q + + +V TY MI
Sbjct: 873 ALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMIC 932
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G G +EA ME++G PD T+ I L + + A KLL EM+ +G+
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 1/240 (0%)
Query: 248 VMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNK 307
V K G + YN+++ ++ +++ M + G ++ +++I+I K K
Sbjct: 179 VKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAK 238
Query: 308 MVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYN 367
+ + L +F +M D Y+ +I LC +GR A E EM KG TY
Sbjct: 239 KIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYK 298
Query: 368 SLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK 427
LLD + KS VD ++ M + + L+ C G++K A E+ ++L K
Sbjct: 299 MLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNK 358
Query: 428 GYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKA 487
+ + + I++ GLC+ +AL ++ M+ + + D+ + II + D KA
Sbjct: 359 EMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK-LDDSNVYGIIISGYLRQNDVSKA 417
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 96/246 (39%), Gaps = 46/246 (18%)
Query: 37 HNADDAISIFNRLLGTSPTPS----------IIEFGQIPSAFSVLGKILKKGYRPDAVTL 86
N ++A F ++ + P + E G A S L + K G+ P V
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAY 822
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG-------------- 132
+ I+ LC G++ AL L+Q +YG+++ GL + G
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKE 882
Query: 133 ---------------------QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSD 171
Q L+ +++EG +P+VV Y +I V +
Sbjct: 883 IGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEE 942
Query: 172 AFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
A+N F M + SPD TY+ + C + ++A +LL EM K I P I F T+
Sbjct: 943 AWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFY 1002
Query: 232 ALGKEG 237
L +EG
Sbjct: 1003 GLNREG 1008
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 209/472 (44%), Gaps = 90/472 (19%)
Query: 24 KPSFHSHSLSPSIHNADDAISIFN---RLLGTSPTPSIIEFGQIPSAFSVLGKILKKGY- 79
+ + S+ PS N D ++ +FN + +S P + + + +GKI +
Sbjct: 10 RSYYKRSSVFPSSDN-DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKL 68
Query: 80 -----RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQT 134
D VT T +I G G++R A + D V +R N V++ ++ G R Q
Sbjct: 69 FDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQL 125
Query: 135 RASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSL 194
+ L ++ + + NVV +NT+ID + + A LF EM + ++V++NS+
Sbjct: 126 SIAEMLFQE----MPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSM 177
Query: 195 LYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV 254
+ G++ EA L + M R+ DV+++ +VD L K G V EA+ + M ++ +
Sbjct: 178 VKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
Query: 255 ---------------------------KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
+ D ++N+++ G+ E+NKA + + M ++
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK 293
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLID------GLCK 340
NV S++ +I G +NK +EALN+F++M + P+ TY S++ GL +
Sbjct: 294 ----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 341 SGRI-----------------------SHAWELV--DEMHNKGQ--PADKFTYNSLLDVL 373
+I S + EL+ +M + G D ++NS++ V
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVY 409
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
H +AI + +MR G +P VTY L+ G ++ E F+DLV
Sbjct: 410 AHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 215/457 (47%), Gaps = 76/457 (16%)
Query: 68 FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKG 127
F+++ I RP LI LC G++ A + D + R + V++ +I G
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITG 86
Query: 128 LCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
++G R + +L +V+ + NVV + ++ + K +S A LF EM + +
Sbjct: 87 YIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----N 139
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
VV++N+++ G+ G++ +A EL DEM +NI +++N++V AL + G + EA N+
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFE 195
Query: 248 VMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNK 307
M ++ D+ ++ +++DG ++++A + + M +R N+ S++ +I G +N
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNN 247
Query: 308 MVDEALNLFAEMECIKIIP--DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+DEA LF +++P D +++++I G ++ ++ A L D M K + +
Sbjct: 248 RIDEADQLF------QVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK----NVIS 297
Query: 366 YNSLLDVLCKSHHVDKAIALTKKM-RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
+ +++ ++ ++A+ + KM RD ++P+V TY ++ L Q++ Q L
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ-L 356
Query: 425 VIKGYH--------------------VTVR--------------TYNIMINGLCKEGLFD 450
+ K H + R ++N MI G
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 451 EALALLSEMEDKGCIPDAITFETIICA-----LFEKG 482
EA+ + ++M G P A+T+ ++ A L EKG
Sbjct: 417 EAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 19/221 (8%)
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
++ S+ P V +I LCK + EA LF + D +T++ +I G
Sbjct: 33 LVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLP----ERDVVTWTHVITGYI 88
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
K G + A EL D + ++ + T+ +++ +S + A L ++M ++ +VV
Sbjct: 89 KLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVV 141
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
++N ++DG + GR+ A E+F ++ + + ++N M+ L + G DEA+ L M
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+ D +++ ++ L + G +A +L M R ++
Sbjct: 198 PRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/427 (19%), Positives = 163/427 (38%), Gaps = 82/427 (19%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI------LKKGYRPDAVTLTTLIKGL 93
D A+ +F+ + P +I+ + + A G+I ++ R D V+ T ++ GL
Sbjct: 157 DKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGL 212
Query: 94 CLKGEVRRALQFHDDVVAR----------GFRLNQ-----------------VSYGTLIK 126
G+V A + D + R G+ N S+ T+I
Sbjct: 213 AKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMIT 272
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK-KVS 185
G R + + L + + NV+ + T+I ++K +A N+FS+M+ V
Sbjct: 273 GFIRNREMNKACGLF----DRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTR----KN----------------------- 218
P+V TY S+L + L E ++ +++ KN
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Query: 219 ------IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
D+I++N+++ G+ KEA + M K G KP TY +L+
Sbjct: 389 FDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAG 448
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLC-KNKMVDEALNLFAEMECIKIIPDTITY 331
+ K + + + P + + LC + + + N + C Y
Sbjct: 449 LVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNF---INCDDARLSRSFY 505
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+++ +S A E+V ++ G D TY + ++ + ++A + KM++
Sbjct: 506 GAILSACNVHNEVSIAKEVVKKVLETGSD-DAGTYVLMSNIYAANGKREEAAEMRMKMKE 564
Query: 392 QGI--QP 396
+G+ QP
Sbjct: 565 KGLKKQP 571
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 30/330 (9%)
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR---KNIGPDVITFNTLVDALGK 235
++ K +PD Y +L+ G+ G++ + +L+ M R +N PD +T+ T+V A
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ-RGVTPNVH 294
G + A+ VLA M + GV + TYN L+ GYC +I++A +L M + G+ P+V
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 295 SYSIIIHGLCKNKMVDE---ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
SY+III G ++D+ AL F EM I P I+Y++L+ SG+ A +
Sbjct: 525 SYNIIIDGCI---LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVF 581
Query: 352 DEMHNKGQ-PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
DEM N + D +N L++ C+ ++ A + +M++ G P+V TY L +G+ +
Sbjct: 582 DEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Query: 411 EGRLKNA----QEVFQDLVIKGYHVTVRTYNIMINGLCK--EGLFD-------------E 451
+ +A +E+ + +K + + + K EGL D +
Sbjct: 642 ARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKK 701
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEK 481
AL +++ ME+ G P+ ++ I + +
Sbjct: 702 ALEIIACMEENGIPPNKTKYKKIYVEMHSR 731
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 155/356 (43%), Gaps = 46/356 (12%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI---LKKGY-------------------- 79
+ +F +LL S PS E +P F+ +I L KGY
Sbjct: 386 VDVFKKLLPNSVDPSG-EPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQD 444
Query: 80 ----RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
PD VT TT++ G + RA Q ++ G N+++Y L+KG C+ Q
Sbjct: 445 DRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQID 504
Query: 136 ASLQLLRQV-EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSL 194
+ LLR++ E ++P+VV YN IID + A F+EM + ++P ++Y +L
Sbjct: 505 RAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTL 564
Query: 195 LYGFCIVGQLKEATELLDEMTR-KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
+ F + GQ K A + DEM + D+I +N LV+ + G +++A+ V++ M + G
Sbjct: 565 MKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 624
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
P++ TY SL +G + A+ + + +R C K +
Sbjct: 625 FYPNVATYGSLANGVSQARKPGDALLLWKEIKER----------------CAVKKKEAPS 668
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
+ ++ + PD +L D ++ A E++ M G P +K Y +
Sbjct: 669 DSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 196/465 (42%), Gaps = 53/465 (11%)
Query: 65 PSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTL 124
P+ S L L +P+++T + + +R Q H RL+ S G L
Sbjct: 113 PTCLSRLVSQLSYQSKPESLT-----RAQSILTRLRNERQLH--------RLDANSLGLL 159
Query: 125 IKGLCRMGQTRASLQLLRQV--EGHLVKPNVVMYNTIIDSLCK--DKLVSDAFNLF---- 176
+ GQT ++ +++ + G+L P+V + + SL D ++ LF
Sbjct: 160 AMAAAKSGQTLYAVSVIKSMIRSGYL--PHVKAWTAAVASLSASGDDGPEESIKLFIAIT 217
Query: 177 -------SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTL 229
+ +V + PD +N++L +G + +L +EM+ + PDV+T+N +
Sbjct: 218 RRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVM 277
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+ + G + VL ++ +G+K + T +SL+ Y ++ A I+ +M ++
Sbjct: 278 IKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREK-- 335
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
+ C + + E AE + D + S D + + G + +
Sbjct: 336 ----RRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKK 391
Query: 350 LV-DEMHNKGQP--------ADKFTYNSLLDVLCKSHHVDKAIALTKKMR---DQGIQPD 397
L+ + + G+P D Y +L+ K+ V + + MR D+ PD
Sbjct: 392 LLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPD 451
Query: 398 VVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLS 457
VTY ++ G + A++V ++ G TYN+++ G CK+ D A LL
Sbjct: 452 EVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLR 511
Query: 458 EM-EDKGCIPDAITFETII--CALFEKGDNYKAEKLLREMMARGL 499
EM ED G PD +++ II C L + D+ A EM RG+
Sbjct: 512 EMTEDAGIEPDVVSYNIIIDGCILID--DSAGALAFFNEMRTRGI 554
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 326 PDTITYSSLIDGLCKSGRISHAWELVDEMH---NKGQPADKFTYNSLLDVLCKSHHVDKA 382
PD+ Y++L+ G K+GR++ +++ M ++ D+ TY +++ + +D+A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI-KGYHVTVRTYNIMIN 441
+ +M G+ + +TYN+L+ G CK+ ++ A+++ +++ G V +YNI+I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 442 GLCKEGLFDE---ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
G L D+ ALA +EM +G P I++ T++ A G A ++ EMM
Sbjct: 532 GCI---LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 135/270 (50%), Gaps = 20/270 (7%)
Query: 204 LKEATELLDEMTRKNIGPDVIT---FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
K + L +++R+ G +V+T L+ LG+EG VKEA M + KPD++
Sbjct: 143 FKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYA 202
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVT--PNVHSYSIIIHGLCKNKM---------- 308
YN++++ C V KA +L+ M G P+ ++Y+I+I C+ M
Sbjct: 203 YNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRR 262
Query: 309 -VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYN 367
+ EA +F EM +PD +TY+ LIDG CK+ RI A EL ++M KG ++ TYN
Sbjct: 263 RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Query: 368 SLLDVLCKSHHVDKAIALTKKMRDQGIQ-PDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
S + ++ ++ AI + + M+ G P TY L+ L + R A+++ ++V
Sbjct: 323 SFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVE 382
Query: 427 KGYHVTVRTYNIMINGLCKEGL---FDEAL 453
G TY ++ + L EGL DE L
Sbjct: 383 AGLVPREYTYKLVCDALSSEGLASTLDEEL 412
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK- 182
L+K L G + +L +++ + KP+V YNTII++LC+ A L +M +
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 183 -KVSPDVVTYNSLLYGFCIVG-----------QLKEATELLDEMTRKNIGPDVITFNTLV 230
+ PD TY L+ +C G ++ EA + EM + PDV+T+N L+
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV- 289
D K + A + M +G P+ TYNS + Y + NEI AI ++ +M + G
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
P +Y+ +IH L + + EA +L EM ++P TY + D L G S
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAS---T 407
Query: 350 LVDEMHNKGQPADKFTYNSLLDV 372
L +E+H + + + Y+ ++ +
Sbjct: 408 LDEELHKRMREGIQQRYSRVMKI 430
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 22/266 (8%)
Query: 259 FTYNSLM--DGYCLV---NEINKAIAILNSMAQRGVTPNV---HSYSIIIHGLCKNKMVD 310
F +N + D CL+ N+ L +++R NV S + ++ L + V
Sbjct: 123 FDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVK 182
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG--QPADKFTYNS 368
EAL F M+ PD Y+++I+ LC+ G A L+D+M G P D +TY
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTI 242
Query: 369 LLDVLCK-----------SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
L+ C+ + +A + ++M +G PDVVTYN L+DG CK R+ A
Sbjct: 243 LISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA 302
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG-CIPDAITFETIIC 476
E+F+D+ KG TYN I + A+ ++ M+ G +P + T+ +I
Sbjct: 303 LELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIH 362
Query: 477 ALFEKGDNYKAEKLLREMMARGLLEK 502
AL E +A L+ EM+ GL+ +
Sbjct: 363 ALVETRRAAEARDLVVEMVEAGLVPR 388
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 14/222 (6%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL--N 117
E G + A + ++ + +PD T+I LC G ++A D + GFR +
Sbjct: 177 EEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPD 236
Query: 118 QVSYGTLIKGLCRMG-QT--RASL--------QLLRQVEGHLVKPNVVMYNTIIDSLCKD 166
+Y LI CR G QT R ++ ++ R++ P+VV YN +ID CK
Sbjct: 237 TYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKT 296
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG-PDVIT 225
+ A LF +M K P+ VTYNS + + + +++ A E++ M + G P T
Sbjct: 297 NRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSST 356
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+ L+ AL + EA++++ M++ G+ P +TY + D
Sbjct: 357 YTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 146/307 (47%), Gaps = 14/307 (4%)
Query: 35 SIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI---------LKKGYRPDAVT 85
+ H D+A+ +F R ++ F + + ++ + D
Sbjct: 190 AAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKA 249
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
+ ++ G C+ G V A +F D++A R + VSYGT+I L + G+ +++L R +
Sbjct: 250 MNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMW 309
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
P+V + N +ID+LC K + +A +F E+ K P+VVTYNSLL C + + +
Sbjct: 310 DTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE 369
Query: 206 EATELLDEMTRK--NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+ EL++EM K + P+ +TF+ L L K+ VL M K + YN
Sbjct: 370 KVWELVEEMELKGGSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
+ Y ++ K I + M + G+ P+ +Y+I IHGL + EAL+ F EM
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 324 IIPDTIT 330
++P+ T
Sbjct: 487 MVPEPRT 493
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 8/322 (2%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
N Y +++ V +A +F + D+V ++ LL C + E E L
Sbjct: 177 NEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHV-EFAETL 235
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
R+ G D+ N +++ GNV EAK ++ +PD+ +Y ++++
Sbjct: 236 FCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKK 295
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
++ KA+ + +M P+V + +I LC K + EAL +F E+ P+ +TY
Sbjct: 296 GKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTY 355
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKG---QPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
+SL+ LCK R WELV+EM KG P D T++ LL +S VD + ++
Sbjct: 356 NSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND-VTFSYLLKYSQRSKDVD---IVLER 411
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
M + YN++ + + + +E++ ++ G RTY I I+GL +G
Sbjct: 412 MAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGK 471
Query: 449 FDEALALLSEMEDKGCIPDAIT 470
EAL+ EM KG +P+ T
Sbjct: 472 IGEALSYFQEMMSKGMVPEPRT 493
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 164/349 (46%), Gaps = 6/349 (1%)
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
++YN I+D L K + + +F EM + + TY LL + ++ EA + +
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER 203
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
I D++ F+ L+ L + +V+ A+ + ++ D+ N +++G+C++
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE-FGCDIKAMNMILNGWCVLGN 262
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+++A + P+V SY +I+ L K + +A+ L+ M + PD ++
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
+ID LC RI A E+ E+ KG + TYNSLL LCK +K L ++M +G
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 394 --IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
P+ VT++ L L R K+ V + + +T YN+M + ++
Sbjct: 383 GSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
+ SEME G PD T+ I L KG +A +EMM++G++
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 178/416 (42%), Gaps = 67/416 (16%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
P T L+KGL + +A++ +D+ +GF ++ V Y L+ G + L+L
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
++++ L +D D V Y L+ G+ +
Sbjct: 259 YQELKEKL--------GGFVD-------------------------DGVVYGQLMKGYFM 285
Query: 201 VGQLKEATELLDEMTRKN--IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
KEA E +E +N + + +N +++AL + G EA + + K+ P
Sbjct: 286 KEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPP-- 343
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
R + N+ +++++++G C +EA+ +F +
Sbjct: 344 ----------------------------RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHH 378
M K PDT+++++L++ LC + ++ A +L EM K D++TY L+D K
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK 435
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
+D+ A K M + ++P++ YN L D L K G+L +A+ F D+++ + Y
Sbjct: 436 IDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKF 494
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY-KAEKLLRE 493
++ L + G DE L ++ EM D + + + + KG EKL+ E
Sbjct: 495 IMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLMEE 550
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 12/302 (3%)
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
L+EA N P + T NT++ A ++ + + + G+ P++ TYN
Sbjct: 111 LEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNL 170
Query: 264 LMDGYCLVNEINKAIAILNSMAQRG-VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
+ Y V + A+ + P++ ++ I++ GL N +++A+ + +M
Sbjct: 171 IFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVK 230
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK--GQPADKFTYNSLLDVLCKSHHVD 380
+ D + YS L+ G K+ +L E+ K G D Y L+
Sbjct: 231 GFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEK 290
Query: 381 KAIALTKKM--RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH------VT 432
+A+ ++ + ++ + YN +++ L + G+ A ++F D V K ++ V
Sbjct: 291 EAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF-DAVKKEHNPPRHLAVN 349
Query: 433 VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLR 492
+ T+N+M+NG C G F+EA+ + +M D C PD ++F ++ L + +AEKL
Sbjct: 350 LGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYG 409
Query: 493 EM 494
EM
Sbjct: 410 EM 411
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 151/346 (43%), Gaps = 16/346 (4%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+P + NT++ + + L + ++P+++TYN + + V + + A E
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALE 186
Query: 210 ----LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
+D + P + TF LV L N+++A + M +G D Y+ LM
Sbjct: 187 HYKLFIDNAP---LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLM 243
Query: 266 DGYCLVNEINKAIAILNSMAQR--GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM--EC 321
G ++ + + + + ++ G + Y ++ G +M EA+ + E E
Sbjct: 244 MGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF-----TYNSLLDVLCKS 376
K+ + Y+ +++ L ++G+ A +L D + + P T+N +++ C
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG 363
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
++A+ + ++M D PD +++N LM+ LC L A++++ ++ K TY
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
++++ KEG DE A M + P+ + + L + G
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+ A V ++ PD ++ L+ LC + A + + ++ + + ++ +Y
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
G L+ + G+ + + ++PN+ +YN + D L K + DA + F +M+V
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMV 482
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM 214
K+ D Y ++ G+L E +++DEM
Sbjct: 483 SKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/537 (22%), Positives = 215/537 (40%), Gaps = 77/537 (14%)
Query: 35 SIHNADDAISIF-NRLLGTSPTPSIIEFGQIPSAFSVLGKILKKG-YRPDAVTLTTLIKG 92
SI + +DA+S + RL T + E A + KG Y + + +++
Sbjct: 137 SIEDVEDALSPWAERLSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRI 196
Query: 93 LCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN 152
L + R D+++ +G + +YGTLI + G +L L ++ ++P+
Sbjct: 197 LGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPD 256
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV------VTYNSLLYGFCIVGQLKE 206
V ++ K + A F + + D TYN+++ + GQ+KE
Sbjct: 257 EVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKE 316
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A+E M + I P +TFNT++ G G + E +++ MK PD TYN L+
Sbjct: 317 ASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT-MKLHCAPDTRTYNILIS 375
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
+ N+I +A A M G+ P+ SY +++ MV+EA L AEM+ +
Sbjct: 376 LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEI 435
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKG---------------------------- 358
D T S+L ++ + +W H G
Sbjct: 436 DEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFI 495
Query: 359 --QPADKFT---YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD------- 406
Q +K T YN ++ S +KA L + M G+ PD TYN L+
Sbjct: 496 CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADM 555
Query: 407 ---GLC-------------------------KEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
G C K G+L A+EV++++V V Y +
Sbjct: 556 PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGV 615
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
+IN G +A++ + M++ G +++ + ++I + G +AE + R+++
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 209/476 (43%), Gaps = 25/476 (5%)
Query: 41 DAISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+A F R+L P+ + F GQ+ S++ K +K PD T LI
Sbjct: 316 EASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM-KTMKLHCAPDTRTYNILI 374
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
++ RA + ++ G + + VSY TL+ + L+ +++ V+
Sbjct: 375 SLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVE 434
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEM-VVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
+ + + + +++ +++ F V +S + + N YG G L EA
Sbjct: 435 IDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYG--ERGYLSEAER 492
Query: 210 LL---DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
+ E+ ++ VI +N ++ A G + ++A + MM GV PD TYN+L+
Sbjct: 493 VFICCQEVNKRT----VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQ 548
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
+ +K L M + G + Y +I K ++ A ++ EM I P
Sbjct: 549 ILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEP 608
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
D + Y LI+ +G + A V+ M G P + YNSL+ + K ++D+A A+
Sbjct: 609 DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 387 KKMR---DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
+K+ ++ PDV T N +++ + ++ A+ +F + +G T+ +M+
Sbjct: 669 RKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMY 727
Query: 444 CKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
K G F+EA + +M + + D +++ +++ G +A + +EM++ G+
Sbjct: 728 KKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI 783
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 158/318 (49%), Gaps = 10/318 (3%)
Query: 84 VTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG---QTRASLQL 140
+ +IK + +A + + +++ G ++ +Y TL++ L + R L+
Sbjct: 506 IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
+R+ G++ + + Y +I S K ++ A ++ EMV + PDVV Y L+ F
Sbjct: 566 MRET-GYV--SDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK---PD 257
G +++A ++ M I + + +N+L+ K G + EA+ + +++ K PD
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
++T N +++ Y + + KA AI +SM QRG N ++++++ KN +EA +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
+M +KI+ D ++Y+S++ GR A E EM + G D T+ SL +L K
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 378 HVDKAIALTKKMRDQGIQ 395
KA+ +++R + I+
Sbjct: 802 MSKKAVRKIEEIRKKEIK 819
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 150/344 (43%), Gaps = 33/344 (9%)
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ Y +IK + +L + + V P+ YNT++ L + +
Sbjct: 506 IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M D + Y +++ F +GQL A E+ EM NI PDV+ + L++A GN
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
V++A + + M + G+ + YNSL+ Y V +++A AI + Q + N Y
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ---SCNKTQY-- 680
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
PD T + +I+ + + A + D M +G
Sbjct: 681 ---------------------------PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG 713
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+ A++FT+ +L + K+ ++A + K+MR+ I D ++YN ++ +GR K A
Sbjct: 714 E-ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAV 772
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
E F+++V G T+ + L K G+ +A+ + E+ K
Sbjct: 773 ETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKK 816
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL 116
S ++ GQ+ A V ++++ PD V LI G V++A+ + + + G
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG 643
Query: 117 NQVSYGTLIKGLCRMG---QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
N V Y +LIK ++G + A + L Q P+V N +I+ + +V A
Sbjct: 644 NSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAE 703
Query: 174 NLFSEMVVK----------------------------------KVSPDVVTYNSLLYGFC 199
+F M + K+ D ++YNS+L F
Sbjct: 704 AIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFA 763
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
+ G+ KEA E EM I PD TF +L L K G K+A + + K+ +K L
Sbjct: 764 LDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGL 822
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 172/367 (46%), Gaps = 16/367 (4%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRL--------NQ 118
F V ++ G+ +TL TLI K ++ DD+V R + N+
Sbjct: 183 GFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKI-------DDLVWRIYECAIDKRIYPNE 234
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
++ +I+ LC+ G+ + + LL ++ G P+V++ +++ + ++ + ++ +L
Sbjct: 235 ITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKR 294
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
+++K + D + Y+ ++Y G L A ++ DEM ++ + + V ++G+
Sbjct: 295 LLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGD 354
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
VKEA+ +L+ M + GV P T+N L+ G+ K + M RG+ P+ +++
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
++ + K + V+ A + + +PD TYS LI G + I A +L EM +
Sbjct: 415 MVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRK 474
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+ SL+ LC V+ K M+ + I+P+ Y+ L+ K G NA
Sbjct: 475 MSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNAD 534
Query: 419 EVFQDLV 425
V+ +++
Sbjct: 535 RVYNEMI 541
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 164/345 (47%)
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+V+ NT+I K K+ + ++ + K++ P+ +T ++ C G+LKE +LL
Sbjct: 198 SVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLL 257
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
D + K P VI +LV + +E ++E+ ++L ++ + + D Y+ ++
Sbjct: 258 DRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKE 317
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
++ A + + M QRG + N Y++ + C+ V EA L +EME + P T+
Sbjct: 318 GDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETF 377
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+ LI G + G E + M +G +N ++ + K +V++A + K D
Sbjct: 378 NCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSID 437
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+G PD TY+ L+ G + + A ++F ++ + + +I GLC G +
Sbjct: 438 KGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEA 497
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
L M+ + P+A ++ +I A + GD A+++ EM++
Sbjct: 498 GEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 167/363 (46%), Gaps = 4/363 (1%)
Query: 101 RALQFHDDVVAR----GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMY 156
R L+ DV R GF L+ ++ TLI + ++ + PN +
Sbjct: 178 RYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITI 237
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
+I LCK+ + + +L + K+ P V+ SL++ +++E+ LL +
Sbjct: 238 RIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLM 297
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
KN+ D I ++ +V A KEG++ A+ V M+++G + F Y + C ++ +
Sbjct: 298 KNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKE 357
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID 336
A +L+ M + GV+P +++ +I G + ++ L M ++P ++ ++
Sbjct: 358 AERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVK 417
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
+ K ++ A E++ + +KG D+ TY+ L+ + + +D+A+ L +M + + P
Sbjct: 418 SVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSP 477
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
+ L+ GLC G+++ ++ + + + Y+ +I K G A +
Sbjct: 478 GFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVY 537
Query: 457 SEM 459
+EM
Sbjct: 538 NEM 540
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 135/324 (41%), Gaps = 45/324 (13%)
Query: 41 DAISIFNRLLGTSPTPSII----------EFGQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+ + + +R+ G PS+I E +I + S+L ++L K D + + ++
Sbjct: 252 EVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVV 311
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
+G++ A + D+++ RGF N Y ++ C G
Sbjct: 312 YAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGD----------------- 354
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
V +A L SEM VSP T+N L+ GF G ++ E
Sbjct: 355 ------------------VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEY 396
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+ M + + P FN +V ++ K NV A +L + +G PD TY+ L+ G+
Sbjct: 397 CEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIE 456
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
N+I++A+ + M R ++P + +I GLC V+ M+ I P+
Sbjct: 457 GNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADI 516
Query: 331 YSSLIDGLCKSGRISHAWELVDEM 354
Y +LI K G ++A + +EM
Sbjct: 517 YDALIKAFQKIGDKTNADRVYNEM 540
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 154/346 (44%), Gaps = 4/346 (1%)
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
++++ ++ K + + F++F + + V+T N+L++ + ++ + + E
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLVWRIYE 223
Query: 214 MT-RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
K I P+ IT ++ L KEG +KE ++L + + P + SL+
Sbjct: 224 CAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
I +++++L + + + + YSI+++ K + A +F EM ++ Y+
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKG-QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+ C+ G + A L+ EM G P D+ T+N L+ + +K + + M
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDE-TFNCLIGGFARFGWEEKGLEYCEVMVT 402
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
+G+ P +N ++ + K + A E+ + KG+ TY+ +I G + D+
Sbjct: 403 RGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQ 462
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
AL L EME + P F ++I L G EK L+ M R
Sbjct: 463 ALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR 508
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 6/243 (2%)
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
++ L+ Y + + + + G T +V + + +IH K+K+ D ++ E
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIY---E 223
Query: 321 CI---KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
C +I P+ IT +I LCK GR+ +L+D + K SL+ + +
Sbjct: 224 CAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
++++++L K++ + + D + Y+I++ KEG L +A++VF +++ +G+ Y
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
+ + C++G EA LLSEME+ G P TF +I G K + M+ R
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 498 GLL 500
GL+
Sbjct: 404 GLM 406
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 125/312 (40%), Gaps = 37/312 (11%)
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA-ILN 282
+ F+ LV K ++ +V + G + T N+L+ Y ++I+ + I
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLVWRIYE 223
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
+ + PN + I+I LCK + E ++L + + +P I +SL+ + +
Sbjct: 224 CAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
RI + L+ + K D Y+ ++ K + A + +M +G + Y
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL-------------- 448
+ + C++G +K A+ + ++ G T+N +I G + G
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 449 --------FDEALALLSEME-------------DKGCIPDAITFETIICALFEKGDNYKA 487
F+E + +S++E DKG +PD T+ +I E D +A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 488 EKLLREMMARGL 499
KL EM R +
Sbjct: 464 LKLFYEMEYRKM 475
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 220/473 (46%), Gaps = 65/473 (13%)
Query: 69 SVLGKILKKGYRP-----------DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
SV+ KI K +RP D L + LC + ++ RA++ D + + G +
Sbjct: 3 SVMSKI--KLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD 60
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
+Y LIK + R + + +P + + N +I+ K L++DA LF
Sbjct: 61 SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
+M + +V+++ +++ + ++A ELL M R N+ P+V T+++++ +
Sbjct: 121 QMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS 176
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+V+ + ++K+G++ D+F ++L+D + + E A+++ + M VT + ++
Sbjct: 177 DVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWN 229
Query: 298 IIIHGLCKNKMVDEALNLFAEME---------------------------------CIKI 324
II G +N D AL LF M+ +K
Sbjct: 230 SIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY 289
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
D I ++L+D CK G + A + ++M + D T+++++ L ++ + +A+
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALK 345
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV-IKGYHVTVRTYNIMINGL 443
L ++M+ G +P+ +T ++ G L++ F+ + + G Y MI+ L
Sbjct: 346 LFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 444 CKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
K G D+A+ LL+EME C PDA+T+ T++ A + + AE ++++A
Sbjct: 406 GKAGKLDDAVKLLNEME---CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 79 YRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASL 138
Y D + L+ C G + AL+ + + R + +++ T+I GL + G ++ +L
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEAL 344
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM-VVKKVSPDVVTYNSLLYG 197
+L +++ KPN + ++ + L+ D + F M + + P Y ++
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV----KEAKNVLAVMMKQG 253
G+L +A +LL+EM PD +T+ TL+ A + N+ AK V+A+
Sbjct: 405 LGKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL----- 456
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
D TY L + Y + + I M RG+
Sbjct: 457 DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 130/254 (51%), Gaps = 1/254 (0%)
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK-KVSPDV 188
R+G + ++ ++ K + +N ++++ K +F E+ K + PDV
Sbjct: 118 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 177
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
+YN+L+ G C G EA L+DE+ K + PD ITFN L+ +G +E + + A
Sbjct: 178 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 237
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
M+++ VK D+ +YN+ + G + N+ + +++ + + + P+V +++ +I G
Sbjct: 238 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
+DEA+ + E+E P ++SL+ +CK+G + A+EL E+ K D+
Sbjct: 298 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 357
Query: 369 LLDVLCKSHHVDKA 382
++D L K D+A
Sbjct: 358 VVDALVKGSKQDEA 371
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 137/304 (45%), Gaps = 11/304 (3%)
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG--NVKEAKNVLAVMMKQGVKPD 257
I + K+A + E RKNI T L A E + E +N M K+G
Sbjct: 54 ITEKFKKACQA--EWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGF--- 108
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
+++ Y V A + + M +R S++ +++ +K D +F
Sbjct: 109 ---VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFK 165
Query: 318 EMEC-IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
E+ + I PD +Y++LI GLC G + A L+DE+ NKG D T+N LL
Sbjct: 166 ELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTK 225
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTY 436
++ + +M ++ ++ D+ +YN + GL E + + +F L V T+
Sbjct: 226 GKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTF 285
Query: 437 NIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
MI G EG DEA+ E+E GC P F +++ A+ + GD A +L +E+ A
Sbjct: 286 TAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFA 345
Query: 497 RGLL 500
+ LL
Sbjct: 346 KRLL 349
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 149/321 (46%), Gaps = 3/321 (0%)
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
+F A FR N Y ++ L + ++L + + II+
Sbjct: 57 KFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLY 116
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE-LLDEMTRK-NIGP 221
+ + +A +F EM + +++N+LL C+ + + E + E+ K +I P
Sbjct: 117 GRVGMFENAQKVFDEMPERNCKRTALSFNALLNA-CVNSKKFDLVEGIFKELPGKLSIEP 175
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
DV ++NTL+ L +G+ EA ++ + +G+KPD T+N L+ + + I
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
M ++ V ++ SY+ + GL +E ++LF +++ ++ PD T++++I G
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G++ A E+ G KF +NSLL +CK+ ++ A L K++ + + D
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVL 355
Query: 402 NILMDGLCKEGRLKNAQEVFQ 422
++D L K + A+E+ +
Sbjct: 356 QEVVDALVKGSKQDEAEEIVE 376
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 123/257 (47%), Gaps = 1/257 (0%)
Query: 97 GEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL-VKPNVVM 155
G A + D++ R + +S+ L+ + + +++ G L ++P+V
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
YNT+I LC ++A L E+ K + PD +T+N LL+ G+ +E ++ M
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
KN+ D+ ++N + L E +E ++ + +KPD+FT+ +++ G+ +++
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
+AI + + G P ++ ++ +CK ++ A L E+ +++ D ++
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 336 DGLCKSGRISHAWELVD 352
D L K + A E+V+
Sbjct: 360 DALVKGSKQDEAEEIVE 376
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 124/259 (47%), Gaps = 3/259 (1%)
Query: 195 LYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM-KQG 253
LYG VG + A ++ DEM +N ++FN L++A + + + K
Sbjct: 115 LYG--RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS 172
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
++PD+ +YN+L+ G C +A+A+++ + +G+ P+ +++I++H +E
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
++A M + D +Y++ + GL + L D++ D FT+ +++
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
+D+AI K++ G +P +N L+ +CK G L++A E+ +++ K V
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 434 RTYNIMINGLCKEGLFDEA 452
+++ L K DEA
Sbjct: 353 AVLQEVVDALVKGSKQDEA 371
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 139/307 (45%), Gaps = 3/307 (0%)
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTR-KNIGPDVITFNTLVDALGKEGNVKEAKNV 245
++ Y + + + E+L+E + N+ + +++ G+ G + A+ V
Sbjct: 70 NIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFV-ARIINLYGRVGMFENAQKV 128
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR-GVTPNVHSYSIIIHGLC 304
M ++ K ++N+L++ + + I + + + P+V SY+ +I GLC
Sbjct: 129 FDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLC 188
Query: 305 KNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
EA+ L E+E + PD IT++ L+ G+ ++ M K D
Sbjct: 189 GKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIR 248
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
+YN+ L L + ++ ++L K++ ++PDV T+ ++ G EG+L A ++++
Sbjct: 249 SYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEI 308
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDN 484
G +N ++ +CK G + A L E+ K + D + ++ AL +
Sbjct: 309 EKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQ 368
Query: 485 YKAEKLL 491
+AE+++
Sbjct: 369 DEAEEIV 375
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)
Query: 17 NNFPVVSKPSFHSH--SLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSA------F 68
N +P +SK F + +L + ++A +F+ + + + + F + +A F
Sbjct: 98 NKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKF 157
Query: 69 SVLGKILKK-----GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
++ I K+ PD + TLIKGLC KG A+ D++ +G + + +++
Sbjct: 158 DLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNI 217
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
L+ G+ Q+ ++ VK ++ YN + L + + +LF ++ +
Sbjct: 218 LLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNE 277
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA 242
+ PDV T+ +++ GF G+L EA E+ + P FN+L+ A+ K G+++ A
Sbjct: 278 LKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESA 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G A +++ +I KG +PD +T L+ KG+ Q +V + + + SY
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+ GL ++ + L +++G+ +KP+V + +I + + +A + E+
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
P +NSLL C G L+ A EL E+ K + D +VDAL K E
Sbjct: 311 NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDE 370
Query: 242 AKNVLAV 248
A+ ++ +
Sbjct: 371 AEEIVEL 377
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 216/486 (44%), Gaps = 100/486 (20%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
+ V+ T ++ LC G A++ D++ R N VS+ TL+ GL R G ++
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGD----MEKA 188
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+QV + +VV +N +I ++ + +A LF +M K +VVT+ S++YG+C
Sbjct: 189 KQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRY 244
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ--GVKPDLF 259
G ++EA L EM +NI +++ ++ +EA + M K V P+
Sbjct: 245 GDVREAYRLFCEMPERNI----VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
Query: 260 TYNSLM-----------------------DGYCLVNEINK-AIAILNSMAQRGVTP---- 291
T SL +G+ V+ + A ++++ A G+
Sbjct: 301 TLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQS 360
Query: 292 ------NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
++ S +III+ KN ++ A LF E +K + D ++++S+IDG ++G +S
Sbjct: 361 LLNESFDLQSCNIIINRYLKNGDLERAETLF---ERVKSLHDKVSWTSMIDGYLEAGDVS 417
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM---------------- 389
A+ L ++H+K D T+ ++ L ++ +A +L M
Sbjct: 418 RAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 390 --------RDQG-------------IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
DQG PD++ N L+ K G +++A E+F +V K
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD 533
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAE 488
TV ++N MI GL GL D+AL L EM D G P+++TF ++ A G +
Sbjct: 534 ---TV-SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGL 589
Query: 489 KLLREM 494
+L + M
Sbjct: 590 ELFKAM 595
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 199/446 (44%), Gaps = 80/446 (17%)
Query: 96 KGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVM 155
+G + A D + RG +N+V Y T + L + +T L R + + + N+V
Sbjct: 55 EGGLVHARHLLDKIPQRG-SINRVVYWTSL--LSKYAKT-GYLDEARVLFEVMPERNIVT 110
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
N ++ K + +++A+ LF EM +VV++ +L C G+ ++A EL DEM
Sbjct: 111 CNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV--------------------- 254
+N V+++NTLV L + G++++AK V M + V
Sbjct: 166 ERN----VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKL 221
Query: 255 ------KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
+ ++ T+ S++ GYC ++ +A + M +R N+ S++ +I G N++
Sbjct: 222 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNEL 277
Query: 309 VDEALNLFAEM--ECIKIIPDTITYSSLI---DGLCKSGR----------ISHAWELVDE 353
EAL LF EM + + P+ T SL GL R IS+ WE VD
Sbjct: 278 YREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDH 337
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
D SL+ + S + A +L + D+ + NI+++ K G
Sbjct: 338 --------DGRLAKSLVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNGD 383
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
L+ A+ +F+ +K H V ++ MI+G + G A L ++ DK D +T+
Sbjct: 384 LERAETLFER--VKSLHDKV-SWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTV 436
Query: 474 IICALFEKGDNYKAEKLLREMMARGL 499
+I L + +A LL +M+ GL
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGL 462
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 148/333 (44%), Gaps = 19/333 (5%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
++VS+ ++I G G + L ++ L + V + +I L +++L ++A +L
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQK----LHDKDGVTWTVMISGLVQNELFAEAASLL 454
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL--LDEMTRKNIGPDVITFNTLVDALG 234
S+MV + P TY+ LL L + + + T PD+I N+LV
Sbjct: 455 SDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYA 514
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
K G +++A + A M V+ D ++NS++ G +KA+ + M G PN
Sbjct: 515 KCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSV 570
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
++ ++ + ++ L LF M E I P Y S+ID L ++G++ A E +
Sbjct: 571 TFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISA 630
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDK---AIALTKKMRDQGIQP-DVVTYNILMDGLC 409
+ D Y +LL LC + DK IA MR + P + + L +
Sbjct: 631 LP---FTPDHTVYGALLG-LCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYA 686
Query: 410 KEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
GR +E+ +++ IKG T +++NG
Sbjct: 687 GLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNG 719
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Query: 98 EVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYN 157
++ ++ + D+++ RG + + ++ T+I + G + +++ ++ +P+ V
Sbjct: 190 DLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMA 249
Query: 158 TIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK 217
+ID+ + V A +L+ +K D VT+++L+ + + G + +EM
Sbjct: 250 AMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKAL 309
Query: 218 NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKA 277
+ P+++ +N L+D++G+ +AK + ++ G P+ TY +L+ Y + A
Sbjct: 310 GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDA 369
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME-CIKIIPDTITYSSLID 336
+AI M ++G++ V Y+ ++ N+ VDEA +F +M+ C PD+ T+SSLI
Sbjct: 370 LAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLIT 429
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
SGR+S A + +M G F S++ K+ VD + ++ + GI P
Sbjct: 430 VYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Query: 397 D 397
D
Sbjct: 490 D 490
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 148/306 (48%), Gaps = 10/306 (3%)
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
NL M K S +V+ YN + F L+++ +L DEM + I PD TF T++
Sbjct: 164 NLLETM---KPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
+ G K A M G +PD T +++D Y ++ A+++ + +
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 294 HSYS--IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
++S I I+G+ N D LN++ EM+ + + P+ + Y+ LID + ++ R A +
Sbjct: 281 VTFSTLIRIYGVSGN--YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
++ G + TY +L+ ++ + D A+A+ ++M+++G+ V+ YN L+ +C +
Sbjct: 339 KDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCAD 397
Query: 412 GR-LKNAQEVFQDLV-IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
R + A E+FQD+ + T++ +I G EA A L +M + G P
Sbjct: 398 NRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLF 457
Query: 470 TFETII 475
++I
Sbjct: 458 VLTSVI 463
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A K+ G PD VT+ +I G V AL +D +R++ V++ TLI+
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
G L + +++ VKPN+V+YN +IDS+ + K A ++ +++ +P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ TY +L+ + +A + EM K + VI +NTL+ V EA +
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIF 408
Query: 247 AVMMK-QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
M + PD +T++SL+ Y +++A A L M + G P + + +I K
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGK 468
Query: 306 NKMVDEALNLFAEMECIKIIPD 327
K VD+ + F ++ + I PD
Sbjct: 469 AKQVDDVVRTFDQVLELGITPD 490
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 148/322 (45%), Gaps = 3/322 (0%)
Query: 149 VKPN--VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
+KP+ V++YN + K K + + LF EM+ + + PD T+ +++ G K
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A E ++M+ PD +T ++DA G+ GNV A ++ + + D T+++L+
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
Y + + + I M GV PN+ Y+ +I + + K +A ++ ++ P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
+ TY++L+ ++ A + EM KG YN+LL + + +VD+A +
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIF 408
Query: 387 KKMRD-QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
+ M++ + PD T++ L+ GR+ A+ + G+ T+ +I K
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGK 468
Query: 446 EGLFDEALALLSEMEDKGCIPD 467
D+ + ++ + G PD
Sbjct: 469 AKQVDDVVRTFDQVLELGITPD 490
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 3/278 (1%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
Y +K + S +L ++ +KP+ + TII ++ + A F +M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
PD VT +++ + G + A L D + D +TF+TL+ G GN
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
N+ M GVKP+L YN L+D +A I + G TPN +Y+ ++
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR-ISHAWELVDEMHN-KG 358
+ + D+AL ++ EM+ + I Y++L+ +C R + A+E+ +M N +
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCET 416
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
D +T++SL+ V S V +A A +MR+ G +P
Sbjct: 417 CDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 131/259 (50%), Gaps = 12/259 (4%)
Query: 223 VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP--DLFTYNSLMDGYCLVNEINKAIAI 280
V+T N + N + A VL ++ + +KP ++ YN M + ++ K+ +
Sbjct: 146 VVTLNNMT-------NPETAPLVLNNLL-ETMKPSREVILYNVTMKVFRKSKDLEKSEKL 197
Query: 281 LNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
+ M +RG+ P+ +++ II +N + A+ F +M PD +T +++ID +
Sbjct: 198 FDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGR 257
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVT 400
+G + A L D + D T+++L+ + S + D + + ++M+ G++P++V
Sbjct: 258 AGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVI 317
Query: 401 YNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME 460
YN L+D + + R A+ +++DL+ G+ TY ++ + D+ALA+ EM+
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 461 DKGCIPDAITFETII--CA 477
+KG I + T++ CA
Sbjct: 378 EKGLSLTVILYNTLLSMCA 396
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 19/235 (8%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLG----------KILKKGYRPDAVTLT 87
N D A+S+++R + F + + V G ++ G +P+ V
Sbjct: 260 NVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319
Query: 88 TLIKGLCLKGEVRRALQ---FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
LI + G +R Q + D++ GF N +Y L++ R +L + R++
Sbjct: 320 RLIDSM---GRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREM 376
Query: 145 EGHLVKPNVVMYNTIIDSLCKD-KLVSDAFNLFSEMV-VKKVSPDVVTYNSLLYGFCIVG 202
+ + V++YNT++ S+C D + V +AF +F +M + PD T++SL+ + G
Sbjct: 377 KEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
++ EA L +M P + +++ GK V + +++ G+ PD
Sbjct: 436 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 208/463 (44%), Gaps = 33/463 (7%)
Query: 51 GTSPTPS------IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ 104
G +P P+ + ++ S K+ K PD V +IKG ++
Sbjct: 61 GVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVR 120
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK----PNVVMYNTII 160
+ +++ G + ++ L+ GL R G +L +++ H+VK N+ + N ++
Sbjct: 121 LYLNMLKEGVTPDSHTFPFLLNGLKRDG---GALACGKKLHCHVVKFGLGSNLYVQNALV 177
Query: 161 D--SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKN 218
SLC L+ A +F ++ DV ++N ++ G+ + + +E+ ELL EM R
Sbjct: 178 KMYSLCG--LMDMARGVFD----RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNL 231
Query: 219 IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAI 278
+ P +T ++ A K + K V + + +P L N+L++ Y E++ A+
Sbjct: 232 VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAV 291
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
I SM R V S++ I+ G + + A F +M + D I+++ +IDG
Sbjct: 292 RIFRSMKARDVI----SWTSIVKGYVERGNLKLARTYFDQMP----VRDRISWTIMIDGY 343
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
++G + + E+ EM + G D+FT S+L ++ + + I+ DV
Sbjct: 344 LRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
V N L+D K G + AQ+VF D+ + T+ M+ GL G EA+ + +
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF----TWTAMVVGLANNGQGQEAIKVFFQ 459
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLE 501
M+D PD IT+ ++ A G +A K +M + +E
Sbjct: 460 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 174/401 (43%), Gaps = 32/401 (7%)
Query: 108 DVVARGFR----LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
D+ R FR + +S+ +++KG R +L+L R + + + + +ID
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVE----RGNLKLARTYFDQMPVRDRISWTIMIDGY 343
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
+ +++ +F EM + PD T S+L +G L+ + + + I DV
Sbjct: 344 LRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
+ N L+D K G ++A+ V M ++ D FT+ +++ G + +AI +
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQ 459
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC-IKIIPDTITYSSLIDGLCKSG 342
M + P+ +Y ++ + MVD+A FA+M +I P + Y ++D L ++G
Sbjct: 460 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAG 519
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPD-VVTY 401
+ A+E++ +M + + +LL H D+ +A + ++PD Y
Sbjct: 520 LVKEAYEILRKM---PMNPNSIVWGALLGA--SRLHNDEPMAELAAKKILELEPDNGAVY 574
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE--- 458
+L + R K+ +EV + +V T I +NG E + + L SE
Sbjct: 575 ALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIY 634
Query: 459 --MEDKGCIPDAITFETIIC----ALFEKGDNYK-AEKLLR 492
+E+ + TF + LFE GD Y A + +R
Sbjct: 635 MKLEE---LAQESTFAAYLPDTSELLFEAGDAYSVANRFVR 672
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 15/381 (3%)
Query: 101 RALQFHDDVVA-RGFRLNQVSYGTLIKGLCRMGQTRASLQLL---RQVEGHLVKP---NV 153
+ L+F+ A RGF + S T++ L R + +LL ++ + L+ P V
Sbjct: 90 QTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQV 149
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
V+ + LC + ++F F +V D +N+LL C + +A +
Sbjct: 150 VLGR--VAKLCSVRQTVESFWKFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHS 205
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
+ + PD+ TFN L+ +EA+ M +G+KPD+ TYNSL+D YC E
Sbjct: 206 L-KHQFQPDLQTFNILLSGWKS---SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDRE 261
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
I KA +++ M + TP+V +Y+ +I GL D+A + EM+ PD Y++
Sbjct: 262 IEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNA 321
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
I C + R+ A +LVDEM KG + TYN VL ++ + ++ L +M
Sbjct: 322 AIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNE 381
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
P+ + L+ + ++ A +++D+V+KG+ +++++ LC +EA
Sbjct: 382 CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAE 441
Query: 454 ALLSEMEDKGCIPDAITFETI 474
L EM +KG P ++F+ I
Sbjct: 442 KCLLEMVEKGHRPSNVSFKRI 462
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 191/413 (46%), Gaps = 56/413 (13%)
Query: 31 SLSPS-IHNADDAIS-IFNRLLGTSPTP-SIIEFGQIPSAFSVLGKILKKGYRPDAVTLT 87
SLS S IH + D I + R+ + P +EF + SA +G+ + +L
Sbjct: 61 SLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAI--------RGFYHSSFSLD 112
Query: 88 TLIKGLCLKGEVRRALQFHDDVVA-----RGF---RLNQVSYGTLIKGLCRMGQTRASLQ 139
T+ L + G R+ Q + ++ R R QV G + K LC + QT S
Sbjct: 113 TM---LYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAK-LCSVRQTVESFW 168
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE--------------------- 178
+++ + +N ++ +LC++K ++DA N++
Sbjct: 169 KFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKS 226
Query: 179 ----------MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT 228
M K + PDVVTYNSL+ +C ++++A +L+D+M + PDVIT+ T
Sbjct: 227 SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT 286
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
++ LG G +A+ VL M + G PD+ YN+ + +C+ + A +++ M ++G
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 289 VTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
++PN +Y++ L + + L+ M + +P+T + LI + ++ A
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAM 406
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
L ++M KG + + LLD+LC V++A +M ++G +P V++
Sbjct: 407 RLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 4/277 (1%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D FN L+ L +E ++ +A+NV + K +PDL T+N L+ G+ +A A
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
M +G+ P+V +Y+ +I CK++ +++A L +M + PD ITY+++I GL
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G+ A E++ EM G D YN+ + C + + A L +M +G+ P+ TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
N+ L L + E++ ++ ++ +I + D A+ L +M
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARG 498
KG ++ + ++ L + +AEK L EM+ +G
Sbjct: 415 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKG 451
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 109/243 (44%)
Query: 77 KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRA 136
KG +PD VT +LI C E+ +A + D + + ++Y T+I GL +GQ
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLY 196
+ ++L++++ + P+V YN I + C + + DA L EMV K +SP+ TYN
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 197 GFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
+ L + EL M P+ + L+ + V A + M+ +G
Sbjct: 360 VLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGS 419
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLF 316
+ L+D C + ++ +A L M ++G P+ S+ I + DE NL
Sbjct: 420 YSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLI 479
Query: 317 AEM 319
+M
Sbjct: 480 QKM 482
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 209/460 (45%), Gaps = 34/460 (7%)
Query: 53 SPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR 112
S SI+ + S +S L + G+ P + TL CL+ +L+F + R
Sbjct: 43 SDAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITL----CLRNNPHLSLRFF--LFTR 96
Query: 113 GFRL---NQVSYGTLIKGLCRMGQTRASLQLLR---------QVEGHLVKPNVVMYNTII 160
+ L + S TLI L R + +++R + E ++K ++ ++I
Sbjct: 97 RYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLK----VFRSLI 152
Query: 161 DSLCKDKLVSDAFNLFSEMVVKKVSPD-VVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
S + F+L + + D V L I Q+ L+ E++R+
Sbjct: 153 KSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRG 212
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
+ V L + +V EAK ++ +KP+ T+NS+M + E
Sbjct: 213 ASNGYKMYREVFGL-DDVSVDEAKKMIG-----KIKPNATTFNSMMVSFYREGETEMVER 266
Query: 280 ILNSMAQR-GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
I M + G +PNV+SY++++ C ++ EA ++ EM+ ++ D + Y+++I GL
Sbjct: 267 IWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGL 326
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
C + + A EL +M KG TY L++ CK+ VD + + ++M+ +G + D
Sbjct: 327 CSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADG 386
Query: 399 VTYNILMDGLC--KEG-RLKNAQEVFQDLVIKG-YHVTVRTYNIMINGLCKEGLFDEALA 454
+T L++GLC ++G R+ A ++ +D V + ++ + Y +++ LC++G D AL
Sbjct: 387 LTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALN 446
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
+ +EM KG P T+ I GD + L EM
Sbjct: 447 IQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEM 486
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G P+ + L++ C +G + A + +++ RG + V+Y T+I GLC + +
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+L R + ++ + Y +++ CK V ++ EM K D +T +L+ G
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 198 FC--IVGQ-LKEATELLDEMTRKNI-GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
C GQ + EA +++ + R+ + P + LV L ++G + A N+ A M+ +G
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
KP TY + +DGY +V + + + MA+
Sbjct: 456 FKPSQETYRAFIDGYGIVGDEETSALLAIEMAE 488
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 107/245 (43%), Gaps = 29/245 (11%)
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
F ++ L+ EI+ A+ ++ + RG+ + + + +I + + + ++ E
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE 222
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE---MHNKGQPADKFTYNSLLDVLCK 375
+ + + VDE M K +P + T+NS++ +
Sbjct: 223 VFGLDDVS------------------------VDEAKKMIGKIKP-NATTFNSMMVSFYR 257
Query: 376 SHHVDKAIALTKKMRDQ-GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVR 434
+ + ++M ++ G P+V +YN+LM+ C G + A++V++++ ++G +
Sbjct: 258 EGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIV 317
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
YN MI GLC +A L +M KG +T+E ++ + GD + REM
Sbjct: 318 AYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREM 377
Query: 495 MARGL 499
+G
Sbjct: 378 KRKGF 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 41/259 (15%)
Query: 279 AILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGL 338
+ L S+ G TP+ +S I L N + LF + DT + S+LI L
Sbjct: 59 STLRSLQPSGFTPS--QFSEITLCLRNNPHLSLRFFLFTRRYSL-CSHDTHSCSTLIHIL 115
Query: 339 CKSGRISHAWELV-----------DE------------MHNKGQPADKFTYNSLLDVLCK 375
+S SHA E++ DE +N+ A F ++ L+
Sbjct: 116 SRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSA-PFVFDLLIKSCLD 174
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL----------- 424
S +D A+ + +K+R +GI + T N L+ + + N ++++++
Sbjct: 175 SKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEA 234
Query: 425 --VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK-GCIPDAITFETIICALFEK 481
+I T+N M+ +EG + + EME++ GC P+ ++ ++ A +
Sbjct: 235 KKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCAR 294
Query: 482 GDNYKAEKLLREMMARGLL 500
G +AEK+ EM RG++
Sbjct: 295 GLMSEAEKVWEEMKVRGVV 313
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 204/444 (45%), Gaps = 7/444 (1%)
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS 120
+ Q+ FS + L+ YRP V T +++ G+++ A + +++ G + V+
Sbjct: 168 WRQVRDFFSWMK--LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVA 225
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
GT++ R G+ A L + V+ + + +YN ++ SL K +L+ EMV
Sbjct: 226 CGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMV 285
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
+ V P+ TY ++ + G +EA + EM P+ +T+++++ K G+ +
Sbjct: 286 EEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWE 345
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
+A + M QG+ P +T +++ Y KA+++ M + + + +II
Sbjct: 346 KAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLII 405
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
K + +A ++F E E + ++ D TY ++ SG + A ++++ M + P
Sbjct: 406 RIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIP 465
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+F Y +L K +VD A + + G+ PD + N +++ + + A+
Sbjct: 466 LSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGF 524
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+ +++ H + Y + CKEG+ EA L+ +M + + D +T+ ++
Sbjct: 525 IKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHI 584
Query: 481 KGDNYKAEKLLR----EMMARGLL 500
+ K E +L ++MA GL+
Sbjct: 585 VNKHDKHEAVLNVSQLDVMALGLM 608
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 161/334 (48%), Gaps = 3/334 (0%)
Query: 89 LIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL 148
+I +G+V +A D ++ G R+ + + TLI R + + + +L G
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAA-GES 699
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
P + ++ID+ + + DA+ LF E K P VT + L+ G+ +EA
Sbjct: 700 KTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAE 759
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
+ KNI D + +NTL+ A+ + G ++ A + M GV + TYN+++ Y
Sbjct: 760 HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
+++KAI I ++ + G+ + Y+ +I K + EAL+LF+EM+ I P T
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGT 879
Query: 329 ITYSSLIDGLCKSGRISHAW-ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
+Y+ ++ +C + R+ H EL+ M G+ D TY +L+ V +S +A
Sbjct: 880 PSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTIT 938
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
++++GI ++ L+ L K G ++ A+ +
Sbjct: 939 LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTY 972
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 11/322 (3%)
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKN 244
+P S++ + G L++A L E K P +T + LV+AL G +EA++
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 245 VLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC 304
+ +++ ++ D YN+L+ ++ A I M GV ++ +Y+ +I
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 305 KNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
+ +D+A+ +F+ + D Y+++I K G++S A L EM KG
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 365 TYNSLLDVLCKS---HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
+YN ++ + S H VD+ L + M G D+ TY L+ + + A++
Sbjct: 881 SYNMMVKICATSRLHHEVDE---LLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+ KG ++ ++ +++ L K G+ +EA +M + G PD+ TI+
Sbjct: 938 TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTC 997
Query: 482 GDNYKAEK--LLREMMARGLLE 501
GD AEK L E M R +E
Sbjct: 998 GD---AEKGILFYEKMIRSSVE 1016
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 144/332 (43%), Gaps = 10/332 (3%)
Query: 51 GTSPTP----------SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVR 100
G S TP + + G + A+ + + +KG P AVT++ L+ L +G+ R
Sbjct: 697 GESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHR 756
Query: 101 RALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTII 160
A + + L+ V Y TLIK + G+ + + ++ ++ V ++ YNT+I
Sbjct: 757 EAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI 816
Query: 161 DSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG 220
+ + A +FS + D Y +++ + G++ EA L EM +K I
Sbjct: 817 SVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIK 876
Query: 221 PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI 280
P ++N +V E +L M + G DL TY +L+ Y ++ +A
Sbjct: 877 PGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKT 936
Query: 281 LNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
+ + ++G+ + +S ++ L K M++EA + +M I PD+ +++ G
Sbjct: 937 ITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMT 996
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
G ++M D+F + + D+
Sbjct: 997 CGDAEKGILFYEKMIRSSVEDDRFVSSVVEDL 1028
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 170/379 (44%), Gaps = 16/379 (4%)
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
+++++G P+ T T ++ +G AL+ ++ + GF +V+Y ++I + G
Sbjct: 283 EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
++ L + + P+ T++ K + A +LF++M K+ D V
Sbjct: 343 DWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRG 402
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
++ + +G +A + +E R N+ D T+ + GNV +A +V+ +M +
Sbjct: 403 LIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTR 462
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
+ F Y ++ Y + ++ A ++++ G+ P+ S + +++ + + ++A
Sbjct: 463 DIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKA 521
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
++ ++ D Y + + CK G ++ A +L+ +M + + D N +
Sbjct: 522 KGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKD----NRFVQT 577
Query: 373 LCKSHHVDKAIALTKKMRDQGI----QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
L +S H+ + K + + + Q DV+ ++++ KEG L + + +L+ K
Sbjct: 578 LAESMHI-----VNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAIL-NLMFKT 631
Query: 429 YHVTVRTYNIMINGLCKEG 447
+ N +I+ +EG
Sbjct: 632 -DLGSSAVNRVISSFVREG 649
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 125/233 (53%), Gaps = 1/233 (0%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
S+ L+ + +++ +++ L + P++V YNT+I +LC+ + D ++F E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
+ PD++++N+LL F E + D M KN+ P++ ++N+ V L +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
+A N++ VM +G+ PD+ TYN+L+ Y + N + + + N M ++G+TP+ +Y +
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
+I LCK +D A+ + E K++ Y +++ L +G+I A +LV
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 137/273 (50%), Gaps = 3/273 (1%)
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA-K 243
S D V LLYG+ G + A +L DEM N V +FN L+ A + EA K
Sbjct: 121 SEDFVIRIMLLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMK 178
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+ K G+ PDL TYN+++ C ++ ++I + + G P++ S++ ++
Sbjct: 179 TFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEF 238
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
+ ++ E ++ M+ + P+ +Y+S + GL ++ + + A L+D M +G D
Sbjct: 239 YRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDV 298
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
TYN+L+ +++++ + +M+++G+ PD VTY +L+ LCK+G L A EV ++
Sbjct: 299 HTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
+ Y ++ L G DEA L+
Sbjct: 359 AIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVK-KVSPDVVTYNSLLYGFCIVGQLKEATELL 211
V +N ++ + K + +A F E+ K ++PD+VTYN+++ C G + + +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+E+ + PD+I+FNTL++ + E + +M + + P++ +YNS + G
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY 331
+ A+ +++ M G++P+VH+Y+ +I + ++E + + EM+ + PDT+TY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
LI LCK G + A E+ +E + Y +++ L + +D+A L K
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 119/240 (49%), Gaps = 3/240 (1%)
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECI 322
L+ GY + E A + + M + V S++ ++ +K +DEA+ F E+ E +
Sbjct: 130 LLYGYSGMAE--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
I PD +TY+++I LC+ G + + +E+ G D ++N+LL+ + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
+ M+ + + P++ +YN + GL + + +A + + +G V TYN +I
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 443 LCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
+ +E + +EM++KG PD +T+ +I L +KGD +A ++ E + LL +
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 10/237 (4%)
Query: 28 HSHSLSPSIH--NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKK-GYRPDAV 84
H+H L + N + + FN LL + + ++ A ++ +K G PD V
Sbjct: 140 HAHKLFDEMPELNCERTVKSFNALLS-----AYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
T T+IK LC KG + L +++ GF + +S+ TL++ R ++ +
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
+ + PN+ YN+ + L ++K +DA NL M + +SPDV TYN+L+ + + L
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGV--KPDLF 259
+E + +EM K + PD +T+ L+ L K+G++ A V +K + +P+++
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR-GVTPN 292
G G + A + M + + + ++N+L+ Y ++++A+ + ++ G+TP+
Sbjct: 133 GYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPD 192
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ +Y+ +I LC+ +D+ L++F E+E PD I++++L++ + + D
Sbjct: 193 LVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD 252
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
M +K + +YNS + L ++ A+ L M+ +GI PDV TYN L+ +
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
L+ + + ++ KG TY ++I LCK+G D A+ + E
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 197/426 (46%), Gaps = 68/426 (15%)
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
Q H ++ R + LI L QT ++++ QV+ +PNV + N++I +
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ----EPNVHLCNSLIRAH 92
Query: 164 CKDKLVSDAFNLFSEM--------------------------VVK---------KVSPDV 188
++ AF +FSEM VVK +S D+
Sbjct: 93 AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDI 152
Query: 189 VTYNSLL--YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
N+L+ Y C +++A +L ++M+ + D +++N+++ L K G +++A+ +
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLF 208
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M ++ DL ++N+++DGY E++KA + M +R N S+S ++ G K
Sbjct: 209 DEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKA 260
Query: 307 KMVDEALNLFAEMECIKIIP--DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
++ A +F +M +P + +T++ +I G + G + A LVD+M G D
Sbjct: 261 GDMEMARVMFDKMP----LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
S+L +S + + + ++ + + N L+D K G LK A +VF D+
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA-----LF 479
K + ++N M++GL G EA+ L S M +G PD +TF ++C+ L
Sbjct: 377 PKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLI 432
Query: 480 EKGDNY 485
++G +Y
Sbjct: 433 DEGIDY 438
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 170/357 (47%), Gaps = 24/357 (6%)
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
K+ +K D V+ +++ GL GE+R A + D++ R +S+ T++ G R
Sbjct: 175 KLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCR 230
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+ + +L + + + N V ++T++ K + A +F +M + + +VVT+
Sbjct: 231 EMSKAFELFEK----MPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWT 284
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
++ G+ G LKEA L+D+M + D +++ A + G + + +++ +
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
+ + + N+L+D Y + KA + N + ++ + S++ ++HGL + EA
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SWNTMLHGLGVHGHGKEA 400
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT----YNS 368
+ LF+ M I PD +T+ +++ +G I E +D ++ + D Y
Sbjct: 401 IELFSRMRREGIRPDKVTFIAVLCSCNHAGLID---EGIDYFYSMEKVYDLVPQVEHYGC 457
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
L+D+L + + +AI + + M ++P+VV + L+ + A+EV +LV
Sbjct: 458 LVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLV 511
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 179/394 (45%), Gaps = 28/394 (7%)
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
++ + P+ +LI+ + +A ++ G + +Y L+K G
Sbjct: 72 RVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS--G 129
Query: 133 QTRASLQLLRQVEGHLVK----PNVVMYNTIID--SLCKDKLVSDAFNLFSEMVVKKVSP 186
Q+ L +++ + H+ K ++ + N +ID S C V DA LF +M +
Sbjct: 130 QSW--LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER---- 183
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
D V++NS+L G G+L++A L DEM ++ D+I++NT++D + + +A +
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELF 239
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M ++ + ++++++ GY ++ A + + M NV +++III G +
Sbjct: 240 EKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEK 293
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
++ EA L +M + D S++ +SG +S + + ++ +
Sbjct: 294 GLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVL 353
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
N+LLD+ K ++ KA + + + D+V++N ++ GL G K A E+F +
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEME 460
+G T+ ++ GL DE + ME
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME 443
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 169/376 (44%), Gaps = 9/376 (2%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y +I+ L + + + ++ + K + YN ++ L AF ++ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
D TY ++ G+L A +L +M + + P F++LVD++GK G +
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
+ V M G +P + SL+D Y +++ A+ + + M + G PN Y++I
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I K+ ++ A+ +F +ME +P TYS L++ SG++ A ++ + M N G
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
+Y SLL +L VD A + +M+ G DV ++LM + K+ + A +
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALK 543
Query: 420 VFQDLVIKGYHVTVRTYNIMINGL----CKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ + G ++T N +I L K GL+D A LL + D + + +I+
Sbjct: 544 WLRFMGSSG----IKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSIL 599
Query: 476 CALFEKGDNYKAEKLL 491
L D K +L+
Sbjct: 600 AHLVRCQDEDKERQLM 615
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 7/314 (2%)
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNT---LVDALGKEGNVKEAKN 244
VV ++ L G VG L +EM + + ++FN ++ L K ++ A
Sbjct: 209 VVLFDGLNQGRDFVG----IQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFC 264
Query: 245 VLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC 304
+ G K D TYN+LM + KA I SM + + +Y +II L
Sbjct: 265 CFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLA 324
Query: 305 KNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKF 364
K+ +D A LF +M+ K+ P +SSL+D + K+GR+ + ++ EM G
Sbjct: 325 KSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSAT 384
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
+ SL+D K+ +D A+ L +M+ G +P+ Y ++++ K G+L+ A VF+D+
Sbjct: 385 MFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDM 444
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDN 484
G+ T TY+ ++ G D A+ + + M + G P ++ +++ L K
Sbjct: 445 EKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLV 504
Query: 485 YKAEKLLREMMARG 498
A K+L EM A G
Sbjct: 505 DVAGKILLEMKAMG 518
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 156/344 (45%), Gaps = 1/344 (0%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
AF K + G + D T L+ KG +A + ++ + L+ +Y +I
Sbjct: 262 AFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIP 321
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
L + G+ A+ +L +Q++ ++P+ ++++++DS+ K + + ++ EM P
Sbjct: 322 SLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRP 381
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ SL+ + G+L A L DEM + P+ + ++++ K G ++ A V
Sbjct: 382 SATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVF 441
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M K G P TY+ L++ + +++ A+ I NSM G+ P + SY ++ L
Sbjct: 442 KDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANK 501
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
++VD A + EM+ + D + S ++ K + A + + M + G + F
Sbjct: 502 RLVDVAGKILLEMKAMGYSVD-VCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFII 560
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
L + K+ D A L + + + D+V Y ++ L +
Sbjct: 561 RQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%)
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
YN ++ ++ A + G + +Y+ ++ + +A ++ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
E + D TY +I L KSGR+ A++L +M + ++SL+D + K+ +
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIM 439
D ++ + +M+ G +P + L+D K G+L A ++ ++ G+ Y ++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 440 INGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
I K G + A+ + +ME G +P T+ ++ G A K+ M GL
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 126/285 (44%), Gaps = 1/285 (0%)
Query: 56 PSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFR 115
PS+ + G++ +AF + ++ ++ RP ++L+ + G + +++ + ++ G R
Sbjct: 321 PSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHR 380
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
+ + +LI + G+ +L+L +++ +PN +Y II+S K + A +
Sbjct: 381 PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F +M P TY+ LL GQ+ A ++ + MT + P + ++ +L+ L
Sbjct: 441 FKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLAN 500
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
+ V A +L M G D+ + LM Y ++ A+ L M G+ N
Sbjct: 501 KRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGIKTNNFI 559
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
+ KN + D A L + D + Y+S++ L +
Sbjct: 560 IRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%)
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
+ ++Y+ +I L K + ++ A F + + DT TY++L+ G A+E+
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
+ M D TY ++ L KS +D A L ++M+++ ++P ++ L+D + K
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
GRL + +V+ ++ G+ + + +I+ K G D AL L EM+ G P+ +
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 472 ETIICALFEKGDNYKAEKLLREMMARGLL 500
II + + G A + ++M G L
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 1/214 (0%)
Query: 139 QLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+L ++ G L +KP++V YNT+I +LC+ + +A L E+ K + PD+VT+N+LL
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
+ GQ + E+ +M KN+ D+ T+N + L E KE N+ + G+KPD
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
+F++N+++ G ++++A A + + G P+ ++++++ +CK + A+ LF
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
E + + T L+D L K + A E+V
Sbjct: 345 ETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 161/343 (46%), Gaps = 3/343 (0%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
P +LT+L+ G + R +F + FR N Y ++ L + ++
Sbjct: 39 PPQKSLTSLVNGE--RNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEI 96
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
L + + + II K + +A +F EM + V+++N+LL + +
Sbjct: 97 LEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRL 156
Query: 201 VGQLKEATELLDEMTRK-NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
+ EL +E+ K +I PD++++NTL+ AL ++ ++ EA +L + +G+KPD+
Sbjct: 157 SKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIV 216
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
T+N+L+ L + I M ++ V ++ +Y+ + GL E +NLF E+
Sbjct: 217 TFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV 379
+ + PD +++++I G G++ A E+ G DK T+ LL +CK+
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDF 336
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
+ AI L K+ + T L+D L K + + A+E+ +
Sbjct: 337 ESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 149/313 (47%), Gaps = 13/313 (4%)
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDE------MTRKNIGPDVITFNTLVDALGKEGNVK 240
++ Y+ + +L E+L+E M+++ +I+ GK G +
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISL------YGKAGMFE 126
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR-GVTPNVHSYSII 299
A+ V M + K + ++N+L+ Y L + + + N + + + P++ SY+ +
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 300 IHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
I LC+ + EA+ L E+E + PD +T+++L+ G+ E+ +M K
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
D TYN+ L L + + L +++ G++PDV ++N ++ G EG++ A+
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEA 306
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
++++V GY T+ +++ +CK G F+ A+ L E K + T + ++ L
Sbjct: 307 WYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELV 366
Query: 480 EKGDNYKAEKLLR 492
+ +AE++++
Sbjct: 367 KGSKREEAEEIVK 379
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 149/346 (43%), Gaps = 17/346 (4%)
Query: 164 CKDKLVSDAFNLFSE--MVVKKVSPDVVTYNSLLYGFC----IVGQLKEATELLDEMTRK 217
C + S A + SE V +SP + SL+ G IV + K+A E E R
Sbjct: 15 CPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACE--SERFRT 72
Query: 218 NIGPDVITFNTLVDA--LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
NI T LV A L + E + M K+G + + Y
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISL------YGKAGMFE 126
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC-IKIIPDTITYSSL 334
A + M R +V S++ ++ +K D LF E+ + I PD ++Y++L
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 335 IDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
I LC+ + A L+DE+ NKG D T+N+LL + + KM ++ +
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALA 454
D+ TYN + GL E + K +F +L G V ++N MI G EG DEA A
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEA 306
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
E+ G PD TF ++ A+ + GD A +L +E ++ L
Sbjct: 307 WYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 45 IFNRLLGT-SPTPSIIEFG----------QIPSAFSVLGKILKKGYRPDAVTLTTLIKGL 93
+FN L G S P I+ + +P A ++L +I KG +PD VT TL+
Sbjct: 166 LFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSS 225
Query: 94 CLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNV 153
LKG+ + +V + ++ +Y + GL +++ + L +++ +KP+V
Sbjct: 226 YLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDV 285
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
+N +I + + +A + E+V PD T+ LL C G + A EL E
Sbjct: 286 FSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
K T LVD L K +EA+ ++ +
Sbjct: 346 TFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKI 380
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV--MMKQGVKPDLFTYNSLMDGYCLVNE 273
RK+ P + +++ G+ E + V+ + K+ + F YN + L
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGR 147
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
IN+AI IL M G P+ S++ I++ L K+ DE +F + + D +
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
LI GLC+SG + A +L+DE + + T++ L+ C ++A L ++M +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
I+PD +T+NIL+ GL K+GR++ ++ + + +KG TY ++ GL + EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
++S+M G P ++++ ++ L E + + +LR+M+ G + K
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPK 376
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS--PDVVTYNSL-LYGFCIVGQLKE 206
+P +Y +I+ + K+ + + + ++K + YN + +YG + G++
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYG-NLAGRINR 150
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
A E+L M P +FN +++ L E + K GV+ D N L+
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G C + A+ +L+ Q+ PNV ++S +I G C +EA L ME +I P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
DTIT++ LI GL K GR+ +L++ M KG + TY +L L +A +
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
+M G++P ++Y ++ GLC+ + V + +V G+
Sbjct: 331 SQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 128/255 (50%), Gaps = 7/255 (2%)
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYN---SLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
G + A +L M G P ++N +L+ L +EI+K I S + GV +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHK---IFVSAPKLGVEIDA 202
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+I+I GLC++ ++ AL L E K P+ +T+S LI G C G+ A++L++
Sbjct: 203 CCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLER 262
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M + D T+N L+ L K V++ I L ++M+ +G +P+ TY ++ GL + R
Sbjct: 263 MEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKR 322
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
A+E+ ++ G + +Y M+ GLC+ E +L +M + G +P + +
Sbjct: 323 NLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWK 382
Query: 474 II-CALFEKGDNYKA 487
++ C + + D+ +A
Sbjct: 383 VVQCVVSKNNDDSQA 397
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%)
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
N +I LC+ + A L E +K P+V+T++ L+ GFC G+ +EA +LL+ M +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINK 276
+ I PD ITFN L+ L K+G V+E ++L M +G +P+ TY ++ G +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
A +++ M G+ P+ SY ++ GLC+ K V E + +M +P T+ + ++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
K G DA L LIKGLC G + ALQ D+ + R N +++ LI+G C G+
Sbjct: 195 KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL 195
+ +LL ++E ++P+ + +N +I L K V + +L M VK P+ TY +L
Sbjct: 255 EAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL 314
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
YG + EA E++ +M + P +++ +V L + +V E VL M+ G
Sbjct: 315 YGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Query: 256 PDLFTYNSLMDGYCLVNEIN 275
P + ++ C+V++ N
Sbjct: 375 PKTLMWWKVVQ--CVVSKNN 392
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G ++ LIKGLC G A+LQLL + +PNV+ ++ +I C +A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
F L M +++ PD +T+N L+ G G+++E +LL+ M K P+ T+ ++
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
L + EAK +++ M+ G++P +Y ++ G C + + +L M G P
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPK 376
Query: 293 VHSYSIIIHGLCKNKMVDEALNL 315
+ ++ + D NL
Sbjct: 377 TLMWWKVVQCVVSKNNDDSQANL 399
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%)
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
G+ ++++L + P+ +N I++ L KL + +F V D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
N L+ G C G L+ A +LLDE ++ P+V+TF+ L+ +G +EA +L M K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
+ ++PD T+N L+ G + + I +L M +G PN +Y +++GL K E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
A + ++M + P ++Y ++ GLC++ + ++ +M N G
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 90/180 (50%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
D N L+ L + GN++ A +L +Q +P++ T++ L+ G+C + +A +L
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
M + + P+ +++I+I GL K V+E ++L M+ P+ TY ++ GL
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
R A E++ +M + G +Y ++ LC++ V + + ++M + G P + +
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 86/188 (45%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN 117
+ E G + +A +L + ++ RP+ +T + LI+G C KG+ A + + + +
Sbjct: 212 LCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
+++ LI GL + G+ + LL +++ +PN Y ++ L K +A + S
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMS 331
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
+M+ + P ++Y ++ G C + E +L +M P + + +V + +
Sbjct: 332 QMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKN 391
Query: 238 NVKEAKNV 245
N N+
Sbjct: 392 NDDSQANL 399
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 226/524 (43%), Gaps = 114/524 (21%)
Query: 38 NADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYR-----PDAVT------L 86
N +A +IF ++ SI+ + + SA++ GK + K ++ P VT +
Sbjct: 65 NLQEAEAIFRQM----SNRSIVSWIAMISAYAENGK-MSKAWQVFDEMPVRVTTSYNAMI 119
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
T +IK C ++ +A + D+ + N VSY T+I G R G+ + L E
Sbjct: 120 TAMIKNKC---DLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLY--AET 170
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
+ + V N ++ + ++A +F M VK +VV+ +S+++G+C +G++ +
Sbjct: 171 PVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVD 226
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDA----------------LGKEGNVKEAKNVLAVMM 250
A L D MT +N VIT+ ++D + +EG+VK N LAVM
Sbjct: 227 ARSLFDRMTERN----VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMF 282
Query: 251 K---------QG-----------VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
K +G ++ DLF NSLM Y + + +A A+ M +
Sbjct: 283 KACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSV 342
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
S++ +I GL + K + EA LF +M D ++++ +I G G IS EL
Sbjct: 343 ----SWNSLITGLVQRKQISEAYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVEL 394
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI------- 403
M K D T+ +++ + + ++A+ KM + + P+ T++
Sbjct: 395 FGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATAS 450
Query: 404 ---LMDGLCKEGRLKNAQEVFQDLVIKGYHVT----------------------VRTYNI 438
L++GL GR+ + DL ++ V+ + +YN
Sbjct: 451 LADLIEGLQIHGRVVK-MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNT 509
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
MI+G G +AL L S +E G P+ +TF ++ A G
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 15/275 (5%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
+ VS+ +LI GL + Q + +L ++ G ++V + +I +S LF
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELF 395
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
M K D +T+ +++ F G +EA +M +K + P+ TF++++ A
Sbjct: 396 GMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
++ E + ++K + DL NSL+ YC N A I + +++ PN+ SY
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSY 507
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+ +I G N +AL LF+ +E P+ +T+ +L+ G + W+ M +
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
Query: 357 KG--QPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+P Y ++D+L +S +D A L M
Sbjct: 568 SYNIEPGPDH-YACMVDLLGRSGLLDDASNLISTM 601
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 185/428 (43%), Gaps = 41/428 (9%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARG-FRLNQ 118
+ G+I A S+ ++ ++ + +T T +I G G + G ++N
Sbjct: 220 KMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNS 275
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ + K + R Q+ V ++ ++ + N+++ K + +A +F
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M K D V++NSL+ G Q+ EA EL ++M G D++++ ++ +G
Sbjct: 336 MKNK----DSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGE 387
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
+ + + +M ++ D T+ +++ + +A+ + M Q+ V PN +++S
Sbjct: 388 ISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSS 443
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
++ + E L + + + I+ D +SL+ CK G + A+++ +
Sbjct: 444 VLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI---S 500
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+P + +YN+++ + KA+ L + G +P+ VT+ L+ G
Sbjct: 501 EP-NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG------ 553
Query: 419 EVFQDLVIKGYHVTVRTYNI---------MINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
+ DL K + +YNI M++ L + GL D+A L+S M C P +
Sbjct: 554 --YVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMP---CKPHSG 608
Query: 470 TFETIICA 477
+ +++ A
Sbjct: 609 VWGSLLSA 616
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 170/401 (42%), Gaps = 62/401 (15%)
Query: 46 FNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF 105
F+ LG S + G + A +V G + K D+V+ +LI GL + ++ A +
Sbjct: 308 FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYEL 363
Query: 106 HDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK 165
+ + + + VS+ +IKG G+ ++L G + + + + + +I +
Sbjct: 364 FEKMPGK----DMVSWTDMIKGFSGKGEISKCVELF----GMMPEKDNITWTAMISAFVS 415
Query: 166 DKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVIT 225
+ +A F +M+ K+V P+ T++S+L + L E ++ + + NI D+
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
N+LV K GN +A + + + +P++ +YN+++ GY KA+ + + +
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCI----SEPNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Query: 286 QRGVTPN-----------VH-------------------------SYSIIIHGLCKNKMV 309
G PN VH Y+ ++ L ++ ++
Sbjct: 532 SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLL 591
Query: 310 DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY--- 366
D+A NL + M C P + + SL+ R+ A EL + + +P Y
Sbjct: 592 DDASNLISTMPC---KPHSGVWGSLLSASKTHLRVDLA-ELAAKKLIELEPDSATPYVVL 647
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+ L ++ K+ D+ + + K R I+ D + I++ G
Sbjct: 648 SQLYSIIGKNRDCDRIMNIKKSKR---IKKDPGSSWIILKG 685
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 6/303 (1%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+ G+ +AF V K + G+ P+A T ++ LC + + A + ++ G
Sbjct: 243 KLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGE 302
Query: 120 SYGTLIKGLCRMGQTRASLQL--LRQVEGHLVKPNVVMYNTIIDSLCK-DKLVSDAFNLF 176
G +I C+ G+ + + L + + + P V T+I +LCK D ++ A +
Sbjct: 303 QMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEML 360
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKE 236
++ + + ++ +++ C + +K+A LL +M K P FN +V A K
Sbjct: 361 GDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKT 420
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSY 296
G++ EAK VL +M +G+KPD++TY ++ GY +++A IL ++ + +Y
Sbjct: 421 GDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTY 480
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC-KSGRISHAWELVDEMH 355
+I G CK + DEAL L EM+ + P+ Y+ LI C K+ A L +EM
Sbjct: 481 HALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMK 540
Query: 356 NKG 358
KG
Sbjct: 541 QKG 543
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 183/412 (44%), Gaps = 35/412 (8%)
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDS 162
+ H D V R F +S LI+ L Q VE LV +
Sbjct: 153 VDLHLDFVVRVFESPGISGKNLIRFLKWATQNEEITVTTSLVESLLV------------A 200
Query: 163 LCKDKLVSDAFNLFSEMVVKKVSP-------DVVTYNSLLYGFCIVGQLKEATELLDEMT 215
+ D DA+ L+ +VK++ ++ N L+ F +G+ K A ++ +
Sbjct: 201 IASDTRRMDAYGLWD--LVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTE 258
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
P+ T+ ++AL K + A +V M+K GV + +++ +C +
Sbjct: 259 EFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAE 318
Query: 276 KAIAI--LNSMAQRGVTPNVHSYSIIIHGLCKN----KMVDEAL-NLFAEMECIKIIPDT 328
+A ++ L ++ + P + +I LCKN E L +L E I P
Sbjct: 319 EAYSVYELAKTKEKSLPPRF--VATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP-- 374
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
+S +I LC+ + A L+ +M +KG +N ++ K+ +D+A + K
Sbjct: 375 --FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL 432
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
M +G++PDV TY +++ G K G + AQE+ + K ++ TY+ +I G CK
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492
Query: 449 FDEALALLSEMEDKGCIPDAITFETIICALFEKG-DNYKAEKLLREMMARGL 499
+DEAL LL+EM+ G P+A + +I + K D KAE L EM +GL
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 11/336 (3%)
Query: 98 EVRRALQFHDDVVARG-FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNV--- 153
E ++ F + V ++ F + + Y +K L R G+ QL+ ++ +VK V
Sbjct: 165 EWQKTHTFFNWVKSKSLFPMETIFYNVTMKSL-RFGR---QFQLIEEMALEMVKDGVELD 220
Query: 154 -VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
+ Y+TII + L + A F M + PD VTY+++L + G+++E L +
Sbjct: 221 NITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYE 280
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
PD I F+ L G+ G+ + VL M VKP++ YN+L++
Sbjct: 281 RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS 332
+ A ++ N M + G+TPN + + ++ K + +AL L+ EM+ K D I Y+
Sbjct: 341 KPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYN 400
Query: 333 SLIDGLCKSGRISHAWELVDEMHNKGQ-PADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+L++ G A L ++M Q D F+Y ++L++ +KA+ L ++M
Sbjct: 401 TLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK 427
G+Q +V+ L+ L K R+ + VF DL IK
Sbjct: 461 AGVQVNVMGCTCLVQCLGKAKRIDDVVYVF-DLSIK 495
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 130/252 (51%), Gaps = 3/252 (1%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A ++ K G PD VT + ++ G+V L ++ VA G++ + +++ L K
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
G +L++++ VKPNVV+YNT+++++ + A +LF+EM+ ++P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ T +L+ + ++A +L +EM K D I +NTL++ G +EA+ +
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLF 419
Query: 247 AVMMKQGV--KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC 304
MK+ V +PD F+Y ++++ Y + KA+ + M + GV NV + ++ L
Sbjct: 420 ND-MKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 478
Query: 305 KNKMVDEALNLF 316
K K +D+ + +F
Sbjct: 479 KAKRIDDVVYVF 490
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 1/252 (0%)
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
M+K GV+ D TY++++ N NKAI M + G+ P+ +YS I+ K+
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
V+E L+L+ PD I +S L ++G ++ EM + + YN+
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 369 LLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKG 428
LL+ + ++ A +L +M + G+ P+ T L+ K ++A ++++++ K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 429 YHVTVRTYNIMINGLCKEGLFDEALALLSEM-EDKGCIPDAITFETIICALFEKGDNYKA 487
+ + YN ++N GL +EA L ++M E C PD ++ ++ G KA
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKA 451
Query: 488 EKLLREMMARGL 499
+L EM+ G+
Sbjct: 452 MELFEEMLKAGV 463
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 155/343 (45%), Gaps = 17/343 (4%)
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD--- 212
+ + L + + A+ L +E V+K P+++++ S+ C + + E L+
Sbjct: 106 FEKTLHILARMRYFDQAWALMAE--VRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFV 163
Query: 213 ----EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
E+ RK G D FN L+ A E +KEA+++ + + PD+ T N L+ G+
Sbjct: 164 KMEKEIFRKKFGVD--EFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGF 220
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
++ + M +RG PN +Y I I G CK + EAL LF +M+ +
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITV 280
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
++LI G + A +L DE+ +G D YN+L+ L K V AI + K+
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKE 340
Query: 389 MRDQGIQPDVVTYNILMDGL--CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
M ++GI+PD VT++ + G+ KE E +Q + + T +++ C
Sbjct: 341 MEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHN 400
Query: 447 GLFDEALALLSEMEDKGCIPDAITFE---TIICALFEKGDNYK 486
G + L L M +KG P E T +CA D ++
Sbjct: 401 GEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFE 443
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 163/354 (46%), Gaps = 19/354 (5%)
Query: 128 LCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCK-------DKLVSDAFNLFSEMV 180
L RM + L+ +V PN++ + ++ LCK ++ + + E+
Sbjct: 113 LARMRYFDQAWALMAEVRKDY--PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF 170
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
KK D +N LL FC ++KEA + +++ + PDV T N L+ + G+V
Sbjct: 171 RKKFGVD--EFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVT 227
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
+ M+K+G KP+ TY +DG+C +A+ + M + V + +I
Sbjct: 228 ATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLI 287
Query: 301 HG--LCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
HG + +NK+ +A LF E+ + PD Y++L+ L K G +S A +++ EM KG
Sbjct: 288 HGSGVARNKI--KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG 345
Query: 359 QPADKFTYNSLLDVLCKSHHV--DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKN 416
D T++S+ + KS + +KM+++ + P T +LM C G +
Sbjct: 346 IEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNL 405
Query: 417 AQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG-CIPDAI 469
++++ ++ KGY ++ LC ++A + ++G C+ + +
Sbjct: 406 GLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPV 459
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 5/316 (1%)
Query: 58 IIEFGQIPSAFSVLGKILKKGYRPD--AVTLTTLIKGLCLKGEVRRALQFHDDVVARGFR 115
I +FG K+ K+ +R L++ C + E++ A + + +R F
Sbjct: 149 IAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR-FN 207
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
+ + L+ G G A+ ++ KPN V Y ID CK + +A L
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F +M V +L++G + +A +L DE++++ + PD +N L+ +L K
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE--INKAIAILNSMAQRGVTPNV 293
G+V A V+ M ++G++PD T++S+ G E N M +R + P
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKT 387
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+ +++ C N V+ L+L+ M P L LC R + A+E +
Sbjct: 388 PTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQ 447
Query: 354 MHNKGQPADKFTYNSL 369
+G+ + Y L
Sbjct: 448 TVERGRCVSEPVYRML 463
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 172/365 (47%), Gaps = 18/365 (4%)
Query: 6 PRVSMSSFLRLNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGT-SPTPSIIEFGQI 64
P S++S LRL PV S+ F L + +++D++ FN S TP+ +E+ ++
Sbjct: 64 PERSLNS-LRL---PVTSE--FVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEEL 117
Query: 65 PSA------FSVLGKILKK----GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR-G 113
+ + + KILK+ TL +I+ G V +A++ + V G
Sbjct: 118 AKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLG 177
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
+ Y +L+ LC + + L+R++ +KP+ Y +++ C + +A
Sbjct: 178 CQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQ 237
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
EM + +P + L+ G G L+ A E++ +MT+ PD+ TFN L++A+
Sbjct: 238 EFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAI 297
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
K G V+ + K G+ D+ TY +L+ + +I++A +LN+ + G P
Sbjct: 298 SKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFP 357
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
Y+ II G+C+N M D+A + F++M+ P+ Y+ LI + G+ A + E
Sbjct: 358 SLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 417
Query: 354 MHNKG 358
M G
Sbjct: 418 MTEMG 422
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 145/317 (45%), Gaps = 1/317 (0%)
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKN 244
+P + Y L + + ++L +M ++ T +++ GK G+V +A
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 245 VLAVMMKQ-GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+ + K G + + YNSL+ C V + A A++ M ++G+ P+ +Y+I+++G
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
C + EA EM P LI+GL +G + A E+V +M G D
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
T+N L++ + KS V+ I + G+ D+ TY L+ + K G++ A + +
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
V G+ Y +I G+C+ G+FD+A + S+M+ K P+ + +I G
Sbjct: 348 CVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGK 407
Query: 484 NYKAEKLLREMMARGLL 500
A L EM GL+
Sbjct: 408 FVDAANYLVEMTEMGLV 424
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 165/354 (46%), Gaps = 8/354 (2%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV--TYNSLLYGFCIVGQLKEAT 208
P + Y + SL K + + +M K +S D+ T ++ + G + +A
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQM--KDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 209 ELLDEMTRKNIG--PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
EL + + K +G V +N+L+ AL A ++ M+++G+KPD TY L++
Sbjct: 167 ELFNGVP-KTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVN 225
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
G+C ++ +A L+ M++RG P ++I GL ++ A + ++M +P
Sbjct: 226 GWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
D T++ LI+ + KSG + E+ G D TY +L+ + K +D+A L
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+ G +P Y ++ G+C+ G +A F D+ +K + Y ++I +
Sbjct: 346 NNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRG 405
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLR-EMMARGL 499
G F +A L EM + G +P + F+ + L G + A ++ + E+ RG+
Sbjct: 406 GKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQLRGV 459
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 112/256 (43%)
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
+L+ LC A ++ +G + ++ +Y L+ G C G+ + + + L ++
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
P + +I+ L + A + S+M PD+ T+N L+ G+++
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
E+ + + D+ T+ TL+ A+ K G + EA +L ++ G KP Y ++ G
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG 366
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD 327
C + A + + M + PN Y+++I + +A N EM + ++P
Sbjct: 367 MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPI 426
Query: 328 TITYSSLIDGLCKSGR 343
+ + + DGL G+
Sbjct: 427 SRCFDMVTDGLKNGGK 442
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 162/330 (49%), Gaps = 9/330 (2%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR----GFRLN 117
G+I A V KI P A TL L+ L K R++L+ +++ + G RL
Sbjct: 122 GRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRK---RQSLELVPEILVKACRMGVRLE 178
Query: 118 QVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVS--DAFNL 175
+ ++G LI LCR+G+ + +L+R + V + +Y+ ++ S+CK K S D
Sbjct: 179 ESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGY 238
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
++ + SP + Y ++ G+ KE +L++M + PD++ + ++ +
Sbjct: 239 LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
+ + +A + ++ G+ PD++TYN ++G C N+I A+ +++SM + G PNV +
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
Y+I+I L K + A L+ EME + ++ T+ +I + + A L++E
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAF 418
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
N ++ LC+ +D+A+ L
Sbjct: 419 NMNVFVKSSRIEEVISRLCEKGLMDQAVEL 448
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 160/337 (47%), Gaps = 17/337 (5%)
Query: 169 VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ-LKEATELLDEMTRKNIGPDVITFN 227
+ +A +F ++ + P T N+LL Q L+ E+L + R + + TF
Sbjct: 124 IEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFG 183
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN--KAIAILNSMA 285
L+DAL + G V A ++ M + V D Y+ L+ C + + I L +
Sbjct: 184 ILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLR 243
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
+ +P + Y++++ L + E +++ +M+C ++ PD + Y+ ++ G+
Sbjct: 244 KTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYP 303
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
A +L DE+ G D +TYN ++ LCK + ++ A+ + M G +P+VVTYNIL+
Sbjct: 304 KADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILI 363
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING-------LCKEGLFDEALALLSE 458
L K G L A+ +++++ G + T++IMI+ +C GL +EA +
Sbjct: 364 KALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM--- 420
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
+ E +I L EKG +A +LL ++
Sbjct: 421 ----NVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 163/350 (46%), Gaps = 20/350 (5%)
Query: 165 KDKLVSDAFN------LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD--EMTR 216
+ L++D+ N L S + P Y ++ QL+ + +L E++
Sbjct: 43 RSNLLTDSENASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSE 102
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE--- 273
K P+ I F ++ A G G ++EA V + P +T N+L+ LV +
Sbjct: 103 KFDTPESI-FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALL--LVLVRKRQS 159
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+ IL + GV ++ I+I LC+ VD A L M +I D YS
Sbjct: 160 LELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSR 219
Query: 334 LIDGLCKSGRISHAWELV----DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
L+ +CK + S ++++ D + P + Y ++ L + + +++ +M
Sbjct: 220 LLSSVCKH-KDSSCFDVIGYLEDLRKTRFSPGLR-DYTVVMRFLVEGGRGKEVVSVLNQM 277
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ ++PD+V Y I++ G+ + A ++F +L++ G V TYN+ INGLCK+
Sbjct: 278 KCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDI 337
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ AL ++S M G P+ +T+ +I AL + GD +A+ L +EM G+
Sbjct: 338 EGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 102/199 (51%)
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
Y +++ L G+ + + +L Q++ V+P++V Y ++ + D+ A LF E++
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 313
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
+ ++PDV TYN + G C ++ A +++ M + P+V+T+N L+ AL K G++
Sbjct: 314 LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLS 373
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
AK + M GV + T++ ++ Y V+E+ A +L V +I
Sbjct: 374 RAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVI 433
Query: 301 HGLCKNKMVDEALNLFAEM 319
LC+ ++D+A+ L A +
Sbjct: 434 SRLCEKGLMDQAVELLAHL 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 14/241 (5%)
Query: 21 VVSKPSFHSHSLSPSIHNAD----DAISIFNRLLGTSPTPSI----------IEFGQIPS 66
V+ P +S LS + D D I L T +P + +E G+
Sbjct: 210 VIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKE 269
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
SVL ++ PD V T +++G+ + +A + D+++ G + +Y I
Sbjct: 270 VVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYIN 329
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
GLC+ +L+++ + +PNVV YN +I +L K +S A L+ EM V+
Sbjct: 330 GLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNR 389
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ T++ ++ + V ++ A LL+E N+ ++ L ++G + +A +L
Sbjct: 390 NSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
Query: 247 A 247
A
Sbjct: 450 A 450
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 160/333 (48%), Gaps = 15/333 (4%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
Q F ++ K + P L+ LC G + +A +F + F ++ +
Sbjct: 207 QAIRTFDIMDKF---KHTPYDEAFQGLLCALCRHGHIEKAEEFML-ASKKLFPVDVEGFN 262
Query: 123 TLIKGLCRMG-QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
++ G C + + ++ R++ + + PN Y+ +I K + D+ L+ EM
Sbjct: 263 VILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKK 322
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
+ ++P + YNSL+Y EA +L+ ++ + + PD +T+N+++ L + G +
Sbjct: 323 RGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDV 382
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
A+NVLA M+ + + P + T+++ ++ VN K + +L M + P ++ +I+
Sbjct: 383 ARNVLATMISENLSPTVDTFHAFLEA---VN-FEKTLEVLGQMKISDLGPTEETFLLILG 438
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA 361
L K K + AL ++AEM+ +I+ + Y + I GL G + A E+ EM +KG
Sbjct: 439 KLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG--- 495
Query: 362 DKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
F N +L L + V K + +K+M Q +
Sbjct: 496 --FVGNPMLQKLLEEQKV-KGVRKSKRMNLQKV 525
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 10/269 (3%)
Query: 229 LVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG 288
++D + +A +M K P + L+ C I KA + +A +
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 289 VTP-NVHSYSIIIHGLCKNKMVD--EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
+ P +V +++I++G C N D EA ++ EM I P+ +YS +I K G +
Sbjct: 253 LFPVDVEGFNVILNGWC-NIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILM 405
+ L DEM +G YNSL+ VL + D+A+ L KK+ ++G++PD VTYN ++
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 406 DGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
LC+ G+L A+ V ++ + TV T++ + + F++ L +L +M+
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLG 427
Query: 466 PDAITFETIICALFEKGDNYKAEKLLREM 494
P TF I+ LF+ A K+ EM
Sbjct: 428 PTEETFLLILGKLFKGKQPENALKIWAEM 456
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 208/495 (42%), Gaps = 54/495 (10%)
Query: 8 VSMSSFLRLNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSA 67
V S LR S +HS S + H A + +++L P S+
Sbjct: 20 VQHQSLLRRAVSTSFSSSVSQNHSFSSAFHRAG---HVHSQVLSYLP--------HFASS 68
Query: 68 FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR----GFRLNQVSYGT 123
K + + + + L L KGL L+ D +A F LN S+ +
Sbjct: 69 NRFSTKTISETFDINLTALAPLEKGLIDLIRQVSELESEADAMASLEDSSFDLNHDSFYS 128
Query: 124 LIKGL----------CRMGQTRA-----SLQLLRQVEGHLVKPNVV------MYNT---- 158
LI L + G+ R S L+ V G+ K N+ M+N
Sbjct: 129 LIWELRDEWRLAFLAFKWGEKRGCDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDT 188
Query: 159 ------IIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
++D S A F M K +P + LL C G +++A E +
Sbjct: 189 RKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM- 247
Query: 213 EMTRKNIGP-DVITFNTLVDALGK-EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+ K + P DV FN +++ +V EAK + M + P+ +Y+ ++ +
Sbjct: 248 -LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSK 306
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
V + ++ + + M +RG+ P + Y+ +++ L + DEA+ L ++ + PD++T
Sbjct: 307 VGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVT 366
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y+S+I LC++G++ A ++ M ++ T+++ L+ + + +K + + +M+
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMK 422
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+ P T+ +++ L K + +NA +++ ++ Y I GL G +
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 451 EALALLSEMEDKGCI 465
+A + SEM+ KG +
Sbjct: 483 KAREIYSEMKSKGFV 497
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
+A+ F M+ K P + L+ LC+ G I A E + K P D +N +L
Sbjct: 207 QAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM-LASKKLFPVDVEGFNVIL 265
Query: 371 DVLCK-SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
+ C V +A + ++M + I P+ +Y+ ++ K G L ++ ++ ++ +G
Sbjct: 266 NGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGL 325
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEK 489
+ YN ++ L +E FDEA+ L+ ++ ++G PD++T+ ++I L E G A
Sbjct: 326 APGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARN 385
Query: 490 LLREMMARGL 499
+L M++ L
Sbjct: 386 VLATMISENL 395
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/548 (22%), Positives = 233/548 (42%), Gaps = 113/548 (20%)
Query: 28 HSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI------LKKGYRP 81
H+++L S + A +F+R+ P P++ + + A+S G I +K
Sbjct: 49 HAYALMKS---STYARRVFDRI----PQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR 101
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLN--QVSYGTLIKGLCRMGQTRASLQ 139
D VT LI+G L G V A++ ++ ++ R F N +V+ T++K + + +
Sbjct: 102 DGVTWNVLIEGYSLSGLVGAAVKAYNTMM-RDFSANLTRVTLMTMLK----LSSSNGHVS 156
Query: 140 LLRQVEGHLVK-----------------------------------PNVVMYNTIIDSLC 164
L +Q+ G ++K N VMYN+++ L
Sbjct: 157 LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
++ DA LF M D V++ +++ G G KEA E EM + + D
Sbjct: 217 ACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
F +++ A G G + E K + A +++ + ++ ++L+D YC ++ A + + M
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITY----------SSL 334
Q+ NV S++ ++ G + +EA+ +F +M+ I PD T SSL
Sbjct: 332 KQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 335 IDG-------------------------LCKSGRISHAWELVDEMHNKGQPADKFTYNSL 369
+G K G I + L +EM+ + D ++ ++
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAM 443
Query: 370 LDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
+ + + I L KM G++PD VT ++ + G ++ Q F+ L+ Y
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK-LMTSEY 502
Query: 430 HV--TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD---- 483
+ ++ Y+ MI+ + G +EA+ ++ M PDAI + T++ A KG+
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP---PDAIGWTTLLSACRNKGNLEIG 559
Query: 484 NYKAEKLL 491
+ AE L+
Sbjct: 560 KWAAESLI 567
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 184/429 (42%), Gaps = 33/429 (7%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEV 99
D ++N L+G ++ G I A + +G D+V+ +IKGL G
Sbjct: 202 DRNTVMYNSLMG-----GLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLA 251
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN----VVM 155
+ A++ ++ +G +++Q +G+++ +G +Q+ +++ N + +
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG----KQIHACIIRTNFQDHIYV 307
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
+ +ID CK K + A +F M K +VV++ +++ G+ G+ +EA ++ +M
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
R I PD T + A +++E + G+ + NSL+ Y +I+
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
+ + N M R S++ ++ + E + LF +M + PD +T + +I
Sbjct: 424 DSTRLFNEMNVRDAV----SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 336 DGLCKSGRISHAWELVDEMHNK-GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGI 394
++G + M ++ G Y+ ++D+ +S +++A+ M
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---F 536
Query: 395 QPDVVTYNILMDGLCKEGRLKNAQEVFQDLV-IKGYHVTVRTYNIMINGLCKEGLFDEAL 453
PD + + L+ +G L+ + + L+ + +H Y ++ + +G +D
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA--GYTLLSSIYASKGKWDSVA 594
Query: 454 ALLSEMEDK 462
L M +K
Sbjct: 595 QLRRGMREK 603
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 149/348 (42%), Gaps = 53/348 (15%)
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
P+ YN++++ + ++ A + D + + P++ ++N L+ A K G + E ++
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEMEST 94
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII------ 299
+ + D T+N L++GY L + A+ N+M R + N+ +++
Sbjct: 95 FEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTLMTMLKLS 149
Query: 300 -----------IHGLCKNKMVDEA--------LNLFAEMECI----KII-----PDTITY 331
IHG K+ E+ L ++A + CI K+ +T+ Y
Sbjct: 150 SSNGHVSLGKQIHGQVI-KLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMY 208
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
+SL+ GL G I A +L +G D ++ +++ L ++ +AI ++M+
Sbjct: 209 NSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 392 QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
QG++ D + ++ G + +++ ++ + + + +I+ CK
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
A + M+ K + +++ ++ + G +A K+ +M G+
Sbjct: 324 AKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 120/269 (44%), Gaps = 18/269 (6%)
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
LG + K + +++ P+ F YN+++ Y L+ A + + + Q P
Sbjct: 15 GLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ----P 70
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
N+ S++ ++ K ++ E + F ++ D +T++ LI+G SG + A +
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 352 DE-MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
+ M + + T ++L + + HV + ++ G + ++ + L+
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
G + +A++VF L + YN ++ GL G+ ++AL L ME D+++
Sbjct: 187 VGCISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVS 237
Query: 471 FETIICALFEKGDNYKAEKLLREMMARGL 499
+ +I L + G +A + REM +GL
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGL 266
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 180/417 (43%), Gaps = 48/417 (11%)
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH-LVKPN--VVMYNTI 159
QF + + R + LI L ++G R LQ++ ++ K N ++Y T
Sbjct: 454 WQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTA 513
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVS-PDVVTYNSLLYGFCIVGQLKEATELLDEMT--- 215
++ L K + +A N+F M+++ S PD+V Y S+ G +KE ++D M
Sbjct: 514 LNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPP 573
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEIN 275
+K P + ++PD+ YN++++ +
Sbjct: 574 KKKFKPTTLE-----------------------KWDPRLEPDVVVYNAVLNACVQRKQWE 610
Query: 276 KAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLI 335
A +L + QRG P+ +Y +I+ + + + F +M+ I P+ + Y L+
Sbjct: 611 GAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI-PNALAYRVLV 669
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
+ L K G+ A V++M ++G Y L LC + ++ + + KK+ +
Sbjct: 670 NTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANK 729
Query: 396 PDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALAL 455
P VVTY L+ G +KNA +F D + K + T NIM+ + GLF+EA L
Sbjct: 730 PLVVTYTGLIQACVDSGNIKNAAYIF-DQMKKVCSPNLVTCNIMLKAYLQGGLFEEAREL 788
Query: 456 LSEMEDKG------------CIPDAITFETII--CALFEKGDNYKAEKLLREMMARG 498
+M + G +PD TF T++ CA EK D++ REM+ G
Sbjct: 789 FQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGY--AYREMLRHG 843
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 24/234 (10%)
Query: 42 AISIFNRLLGTSPTPSIIEFGQIPSA------FSVLGKILKKGYR---PDAVTLTTLIKG 92
A + +L PS + +G I ++++ + +K + P+A+ L+
Sbjct: 612 AFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNT 671
Query: 93 LCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN 152
L +G+ A+ +D+ +RG + Y L + LC G+ L +L+++ KP
Sbjct: 672 LWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPL 731
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV-SPDVVTYNSLLYGFCIVGQLKEATELL 211
VV Y +I + + +A +F +M KKV SP++VT N +L + G +EA EL
Sbjct: 732 VVTYTGLIQACVDSGNIKNAAYIFDQM--KKVCSPNLVTCNIMLKAYLQGGLFEEARELF 789
Query: 212 DEMTR-----KN-------IGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
+M+ KN + PD TFNT++D ++ + M++ G
Sbjct: 790 QKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHG 843
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMEC-IKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
Y+ ++ L K++ EALN+F M I PD + Y S+ L ++G I + ++D M
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTM 569
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+ P KF K L K D ++PDVV YN +++ + +
Sbjct: 570 --RSPPKKKF----------------KPTTLEKW--DPRLEPDVVVYNAVLNACVQRKQW 609
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ A V Q L +G + TY +++ + ++ +M+ K IP+A+ + +
Sbjct: 610 EGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQ-KSSIPNALAYRVL 668
Query: 475 ICALFEKGDNYKAEKLLREMMARGLL 500
+ L+++G + +A + +M +RG++
Sbjct: 669 VNTLWKEGKSDEAVHTVEDMESRGIV 694
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 105/251 (41%), Gaps = 14/251 (5%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
PD V ++ + + A + RG + + V+YG +++ + + +
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
R+++ + PN + Y ++++L K+ +A + +M + + Y L C
Sbjct: 651 FRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
G+ E +L ++ R P V+T+ L+ A GN+K A + MK+ P+L T
Sbjct: 710 AGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFD-QMKKVCSPNLVT 768
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRG------------VTPNVHSYSIIIHGLCKNKM 308
N ++ Y +A + M++ G V P+ ++++ ++ + +
Sbjct: 769 CNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEK 828
Query: 309 VDEALNLFAEM 319
D+ + EM
Sbjct: 829 WDDFGYAYREM 839
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 205/460 (44%), Gaps = 77/460 (16%)
Query: 80 RPDAVTLTTLIKGLCLKGEVR---RALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRA 136
+ D VT T+I G G +R A + D++ +R + S+ T+I G + +
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGE 154
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP---------- 186
+L L + + + N V ++ +I C++ V A LF +M VK SP
Sbjct: 155 ALLLFEK----MPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIK 210
Query: 187 ----------------------DVV-TYNSLLYGFCIVGQLKEATELLDEMT-------- 215
D+V YN+L+ G+ GQ++ A L D++
Sbjct: 211 NERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHG 270
Query: 216 ---RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
R+ +V+++N+++ A K G+V A+ ++ Q D ++N+++DGY V+
Sbjct: 271 GEFRERFCKNVVSWNSMIKAYLKVGDVVSAR----LLFDQMKDRDTISWNTMIDGYVHVS 326
Query: 273 EINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPD--TIT 330
+ A A+ + M R + HS+++++ G V+ A + F + P+ T++
Sbjct: 327 RMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEK------TPEKHTVS 376
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
++S+I K+ A +L M+ +G+ D T SLL ++ + + ++
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM-HQIV 435
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
+ + PDV +N L+ + G + ++ +F ++ +K V T+N MI G G
Sbjct: 436 VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR---EVITWNAMIGGYAFHGNAS 492
Query: 451 EALALLSEMEDKGCIPDAITFETIICALFEKG--DNYKAE 488
EAL L M+ G P ITF +++ A G D KA+
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQ 532
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 184/390 (47%), Gaps = 53/390 (13%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
GFR +I R G + + ++E N V +NT+I K + ++ A
Sbjct: 39 GFRATNKELNQMI----RSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQA 90
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ---LKEATELLDEMTRKNIGPDVITFNTL 229
LF M + DVVT+N+++ G+ G L+EA +L DEM + D ++NT+
Sbjct: 91 RKLFDVMPKR----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTM 142
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+ K + EA ++ ++ + + ++++++ G+C E++ A+ + M +
Sbjct: 143 ISGYAKNRRIGEA----LLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDS 198
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYS--SLIDGLCKSGRISHA 347
+P ++ GL KN+ + EA + + + + + Y+ +LI G + G++ A
Sbjct: 199 SP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAA 254
Query: 348 WELVDEM------HNKGQPADKF-----TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
L D++ + G+ ++F ++NS++ K V A L +M+D+
Sbjct: 255 RCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR---- 310
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
D +++N ++DG R+++A +F ++ + H ++N+M++G G + A
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SWNMMVSGYASVGNVELARHYF 366
Query: 457 SEMEDKGCIPDAITFETIICALFEKGDNYK 486
+ +K +++ +II A +EK +YK
Sbjct: 367 EKTPEK----HTVSWNSIIAA-YEKNKDYK 391
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 199/476 (41%), Gaps = 71/476 (14%)
Query: 40 DDAISIFNRLLGTSPTP------SIIEFGQIPSAFSVLGKI--LKKGYRPDAVTLTTLIK 91
D A+ +F ++ +P +I+ ++ A VLG+ L G TLI
Sbjct: 184 DSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIV 243
Query: 92 GLCLKGEVRRALQFHDDV-----------VARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
G +G+V A D + F N VS+ ++IK ++G ++ L
Sbjct: 244 GYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLL 303
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
Q++ + + +NT+ID + DAF LFSEM + D ++N ++ G+
Sbjct: 304 FDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYAS 355
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
VG ++ A ++ K+ +++N+++ A K + KEA ++ M +G KPD T
Sbjct: 356 VGNVELARHYFEKTPEKH----TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHT 411
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV--HSYSIIIHGLCKNKMVDEALNLFAE 318
SL+ + + + ++ + + V P+V H+ I ++ C M E+ +F E
Sbjct: 412 LTSLLSASTGLVNLRLGMQ-MHQIVVKTVIPDVPVHNALITMYSRCGEIM--ESRRIFDE 468
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHH 378
M K+ + IT++++I G G S A L M + G T+ S+L+ +
Sbjct: 469 M---KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGL 525
Query: 379 VDKAIA-LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ------DLVIKGY-- 429
VD+A A M I+P + Y+ L++ +G+ + A + D + G
Sbjct: 526 VDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALL 585
Query: 430 ------------HVTVRT-----------YNIMINGLCKEGLFDEALALLSEMEDK 462
HV Y ++ N GL+DEA + ME K
Sbjct: 586 DACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESK 641
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 133/288 (46%), Gaps = 38/288 (13%)
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
N ++ + + G + EA+++ + + + T+N+++ GY E+N+A + + M +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 287 RGVTPNVHSYSIIIHGL--CKN-KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
R V +++ +I G C + ++EA LF EM D+ +++++I G K+ R
Sbjct: 100 RDVV----TWNTMISGYVSCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRR 151
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
I A L ++M + + ++++++ C++ VD A+ L +KM + P
Sbjct: 152 IGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCA---- 203
Query: 404 LMDGLCKEGRLKNAQEVFQDL--VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
L+ GL K RL A V ++ G V YN +I G + G + A L ++ D
Sbjct: 204 LVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPD 263
Query: 462 ------------KGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
+ C + +++ ++I A + GD A L +M R
Sbjct: 264 LCGDDHGGEFRERFC-KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 115/256 (44%), Gaps = 15/256 (5%)
Query: 36 IHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKI------LKKGYRPDAVTLTTL 89
+ +DA ++F+ + P + + S ++ +G + +K V+ ++
Sbjct: 325 VSRMEDAFALFSEM----PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSI 380
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
I + + A+ + G + + + +L+ + R +Q+ Q+ V
Sbjct: 381 IAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM-HQIVVKTV 439
Query: 150 KPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
P+V ++N +I + + ++ +F EM +K+ +V+T+N+++ G+ G EA
Sbjct: 440 IPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR---EVITWNAMIGGYAFHGNASEALN 496
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK-QGVKPDLFTYNSLMDGY 268
L M I P ITF ++++A G V EAK MM ++P + Y+SL++
Sbjct: 497 LFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVT 556
Query: 269 CLVNEINKAIAILNSM 284
+ +A+ I+ SM
Sbjct: 557 SGQGQFEEAMYIITSM 572
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 211/484 (43%), Gaps = 63/484 (13%)
Query: 31 SLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
+L + D AI + G S I G I A+ +GKI D V
Sbjct: 427 NLQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEKVGKI-------DVVPCV--- 475
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
LKG FH+ + RLNQ S+ +L+ + G L LLR+ +
Sbjct: 476 ----LKG------SFHNHI-----RLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSA 520
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
+Y+ +I S + ++DA +++ + ++ ++++ + ++G+ EA +L
Sbjct: 521 FESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKL 580
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ-GVKPDLFTYNSLMDGY- 268
+ + D I F+ +V K G+++EA +VL +M +Q + PD++ + ++ Y
Sbjct: 581 YLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQ 640
Query: 269 ----------------------------CLVNEINKAIAI------LNSMAQRGVTPNVH 294
C++N +A+ + M + G TPN
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
++++++ K K+ + LF + ++ D I+Y+++I K+ ++ + M
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
G YN+LLD K ++K ++ K+M+ PD TYNI+++ ++G +
Sbjct: 760 QFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWI 819
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+V ++L G + +YN +I G+ +EA+ L+ EM + IPD +T+ +
Sbjct: 820 DEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNL 879
Query: 475 ICAL 478
+ AL
Sbjct: 880 VTAL 883
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
L ++ + N MYN +I+ + + + F EM+ +P+ VT+N LL +
Sbjct: 650 HLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY 709
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
K+ EL R + DVI++NT++ A GK + + + M G L
Sbjct: 710 GKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSL 768
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
YN+L+D Y ++ K +IL M + P+ ++Y+I+I+ + +DE ++ E
Sbjct: 769 EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKE 828
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHH 378
++ + PD +Y++LI G + A LV EM + DK TY +L+ L ++
Sbjct: 829 LKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDE 888
Query: 379 VDKAIALTKKMRDQGI 394
+AI + M+ GI
Sbjct: 889 FLEAIKWSLWMKQMGI 904
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 113/220 (51%), Gaps = 5/220 (2%)
Query: 107 DDVVARGFRLNQVSYGTL--IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
++++ GF N V++ L + G ++ + L LL + G + +V+ YNTII +
Sbjct: 688 EEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV---DVISYNTIIAAYG 744
Query: 165 KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
K+K ++ + M S + YN+LL + Q+++ +L M + GPD
Sbjct: 745 KNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHY 804
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
T+N +++ G++G + E +VL + + G+ PDL +YN+L+ Y + + +A+ ++ M
Sbjct: 805 TYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
R + P+ +Y+ ++ L +N EA+ M+ + I
Sbjct: 865 RGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/474 (20%), Positives = 195/474 (41%), Gaps = 61/474 (12%)
Query: 45 IFNRLLGTSPTPSIIEF------GQIPSAFSVLGKILKK-GYRPDAVTLTTLIKGLCLKG 97
I RL S T +I F G++ F IL+ G R + LIK LC
Sbjct: 145 ILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFH 204
Query: 98 EVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYN 157
E +++ Q + T+I + G + + + + V+PNV
Sbjct: 205 EFQKSYQV---------------FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIG 249
Query: 158 TIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK 217
++ K+ V +A FS M + + Y+S++ + + +A E++D M +
Sbjct: 250 MLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQD 308
Query: 218 NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKA 277
+ + + +++A ++G ++ A+++L M G P++ YN+L+ GY + ++ A
Sbjct: 309 RVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAA 368
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG 337
+ + + G+ P+ SY +I G + +EA + + E++ P++ +LI+
Sbjct: 369 QGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINL 428
Query: 338 LCKSGRISHAWELVDEMHNKG-----------QPADKF---------------------- 364
K G A + +++M G Q +K
Sbjct: 429 QAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQ 488
Query: 365 -TYNSLLDVLCKSHHVDKAIAL--TKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF 421
+++SL+ K VD + L KK RD + + Y++L+ + G+L +A +++
Sbjct: 489 TSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL--YHLLICSCKESGQLTDAVKIY 546
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ + + + MI+ G F EA L ++ G + D I F ++
Sbjct: 547 NHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/516 (18%), Positives = 208/516 (40%), Gaps = 87/516 (16%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGL--CLKGEVRRALQFHDDVVARGFRLNQV 119
G++ A S+L + G+ P+ + TLI G K E + L FH + G ++
Sbjct: 328 GKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGL-FH-RLCNIGLEPDET 385
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
SY ++I+G R + ++++ KPN T+I+ K A +M
Sbjct: 386 SYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
Query: 180 ----------------VVKKVSP-DVV-----------------TYNSLLYGFCIVGQLK 205
+KV DVV +++SL+ + G +
Sbjct: 446 TGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVD 505
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
+ LL E ++ + ++ L+ + + G + +A + M+ + +L ++++
Sbjct: 506 DCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMI 565
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK-I 324
D Y ++ E ++A + ++ GV + +SI++ K ++EA ++ M+ K I
Sbjct: 566 DIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDI 625
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHN-------KGQPADKFTYNSLLDVLCKSH 377
+PD + ++ RI +L D++ + G ++ YN +++ ++
Sbjct: 626 VPDVYLFRDML-------RIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARAL 678
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVF---------------- 421
+D+ ++M G P+ VT+N+L+D K K E+F
Sbjct: 679 PLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNT 738
Query: 422 ------------------QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
+++ G+ V++ YN +++ K+ ++ ++L M+
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 464 CIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
PD T+ +I E+G + +L+E+ GL
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 212/479 (44%), Gaps = 35/479 (7%)
Query: 20 PVVSKPSFHSHSL---SPSIHNADDAISIFNRLLGTSPTPSIIEF----------GQIPS 66
P+ SK + H++ + + D A+ F R+ P + F ++
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
+ G ++K G+ D +T L +V A + D + R + VS+ T++
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVA 209
Query: 127 GLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
G + G R +L++++ + +KP+ + +++ ++ +L+S + +
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
V +L+ + G L+ A +L D M +N V+++N+++DA + N KEA +
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERN----VVSWNSMIDAYVQNENPKEAMLIF 325
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
M+ +GVKP + + + ++ + I + G+ NV + +I CK
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
K VD A ++F +++ + ++++++I G ++GR A +M ++ D FTY
Sbjct: 386 KEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 367 NSLLDVLCK---SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
S++ + + +HH + + + +V L+D K G + A+ +F
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMR---SCLDKNVFVTTALVDMYAKCGAIMIARLIFD- 497
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
++ HVT T+N MI+G G AL L EM+ P+ +TF ++I A G
Sbjct: 498 -MMSERHVT--TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 182/441 (41%), Gaps = 91/441 (20%)
Query: 136 ASLQLLRQVEGHLVKPNVV---MYNTIIDSL-CKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
+SL+ LRQ+ + K + + T + SL C+ V +A +F E + K++ V Y
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVF-EPIDSKLN---VLY 103
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
+++L GF V L +A + M ++ P V F L+ G E ++ K + +++K
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
G DLF L + Y ++N+A + + M +R + S++ I+ G +N M
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV----SWNTIVAGYSQNGMARM 219
Query: 312 ALNLFAEMECIKIIPDTITY-----------------------------------SSLID 336
AL + M + P IT ++L+D
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
K G + A +L D M + + ++NS++D ++ + +A+ + +KM D+G++P
Sbjct: 280 MYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 397 -----------------------------------DVVTYNILMDGLCKEGRLKNAQEVF 421
+V N L+ CK + A +F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 422 QDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
L + T+ ++N MI G + G +AL S+M + PD T+ ++I A+ E
Sbjct: 396 GKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 482 GDNYKAEKLLREMMARGLLEK 502
+ A K + ++ R L+K
Sbjct: 452 SITHHA-KWIHGVVMRSCLDK 471
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 180/423 (42%), Gaps = 62/423 (14%)
Query: 53 SPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVAR 112
S P++ I + G ++ G+ T L+ G + A Q D ++ R
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP--------------------- 151
N VS+ ++I + + ++ + +++ VKP
Sbjct: 301 ----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 152 --------------NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
NV + N++I CK K V A ++F ++ S +V++N+++ G
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ----SRTLVSWNAMILG 412
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
F G+ +A +M + + PD T+ +++ A+ + AK + V+M+ + +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFA 317
+F +L+D Y I A I + M++R VT +++ +I G + AL LF
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVT----TWNAMIDGYGTHGFGKAALELFE 528
Query: 318 EMECIKIIPDTITYSSLIDGLCKSGRISHA---WELVDEMHNKGQPADKFTYNSLLDVLC 374
EM+ I P+ +T+ S+I SG + + ++ E ++ D Y +++D+L
Sbjct: 529 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH--YGAMVDLLG 586
Query: 375 KSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK------G 428
++ +++A +M ++P V Y ++ G C+ + N E + + + G
Sbjct: 587 RAGRLNEAWDFIMQM---PVKPAVNVYGAML-GACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 429 YHV 431
YHV
Sbjct: 643 YHV 645
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 167/367 (45%), Gaps = 4/367 (1%)
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
LLR+ H +P Y + L K A LF M+ + + P + Y SL+
Sbjct: 131 FNLLRK--QHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISV 188
Query: 198 FCIVGQLKEATELLDEM-TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP 256
+ L +A L+ M + + PDV TF L+ K G K+++ M GV
Sbjct: 189 YGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGC 248
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT-PNVHSYSIIIHGLCKNKMVDEALNL 315
TYN+++DGY + ++L M + G + P+V + + II + + + +
Sbjct: 249 STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESW 308
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
++ + + + PD T++ LI K+G ++D M + TYN +++ K
Sbjct: 309 YSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGK 368
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
+ ++K + +KM+ QG++P+ +TY L++ K G + V + +V +
Sbjct: 369 AGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPF 428
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
+N +IN + G L +ME++ C PD ITF T+I G ++L ++M+
Sbjct: 429 FNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
Query: 496 ARGLLEK 502
+ + +K
Sbjct: 489 SSDIGKK 495
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 161/342 (47%), Gaps = 2/342 (0%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y L K L Q + L + +KP + +Y ++I K +L+ AF+ M
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 205
Query: 180 -VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
V PDV T+ L+ C +G+ ++ EM+ +G +T+NT++D GK G
Sbjct: 206 KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 265
Query: 239 VKEAKNVLAVMMKQGVK-PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+E ++VLA M++ G PD+ T NS++ Y + K + + GV P++ +++
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
I+I K M + ++ ME T+TY+ +I+ K+GRI ++ +M +
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ 385
Query: 358 GQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNA 417
G + TY SL++ K+ V K ++ +++ + + D +N +++ + G L
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATM 445
Query: 418 QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
+E++ + + T+ MI G+FD L +M
Sbjct: 446 KELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 18/330 (5%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGK--ILKKGY------------RPDAVT 85
D A +F +L P+I + S SV GK +L K + +PD T
Sbjct: 161 DQASLLFEVMLSEGLKPTIDVY---TSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFT 217
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQ-V 144
T LI C G ++ G + V+Y T+I G + G +L +
Sbjct: 218 FTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMI 277
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
E P+V N+II S + + + +S + V PD+ T+N L+ F G
Sbjct: 278 EDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMY 337
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
K+ ++D M ++ +T+N +++ GK G +++ +V M QGVKP+ TY SL
Sbjct: 338 KKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSL 397
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKI 324
++ Y + K ++L + V + ++ II+ + + L+ +ME K
Sbjct: 398 VNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKC 457
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEM 354
PD IT++++I G EL +M
Sbjct: 458 KPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 38/266 (14%)
Query: 272 NEINKAIAILNSM-AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
N A+ I N + Q P +Y+ + L K D+A LF M + P
Sbjct: 122 NRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDV 181
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQ-PADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
Y+SLI KS + A+ ++ M + D FT+ L+ CK D ++ +M
Sbjct: 182 YTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEM 241
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV------------------------ 425
G+ VTYN ++DG K G + + V D++
Sbjct: 242 SYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN 301
Query: 426 ------------IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFET 473
+ G + T+NI+I K G++ + +++ ME + +T+
Sbjct: 302 MRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNI 361
Query: 474 IICALFEKGDNYKAEKLLREMMARGL 499
+I + G K + + R+M +G+
Sbjct: 362 VIETFGKAGRIEKMDDVFRKMKYQGV 387
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 182/398 (45%), Gaps = 26/398 (6%)
Query: 117 NQVSYG--TLIKGL-CRMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDA 172
+Q SY T+ + L C + +L+ VE + +N +ID L K +
Sbjct: 41 DQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEIS 100
Query: 173 FNLFSEMVVKKVS-PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
+ L + M+ S P+ VT+ + + ++EA + D++ N+ D +F LVD
Sbjct: 101 WALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNL-RDETSFYNLVD 159
Query: 232 ALGKEGNVKEA------KNVLAVMMKQGVK-PDLFTYNSLMDGYCLVNEINKAIAILNSM 284
AL + +V EA KNV+ G + +N ++ G+ + K M
Sbjct: 160 ALCEHKHVVEAEELCFGKNVIG----NGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKM 215
Query: 285 AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
GVT ++ SYSI + +CK+ +A+ L+ EM+ ++ D + Y+++I + S +
Sbjct: 216 DTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGV 275
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
+ EM +G + T+N+++ +LC+ + A + +M +G QPD +TY
Sbjct: 276 EFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY--- 332
Query: 405 MDGLCKEGRLKNAQEV---FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
+C RL+ E+ F ++ G + TY +++ + G L + M++
Sbjct: 333 ---MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKE 389
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
G PD+ + +I AL +KG A + EM+ RGL
Sbjct: 390 SGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 143/310 (46%), Gaps = 16/310 (5%)
Query: 19 FPVVSKPSFHSHSLSPSIHNAD--------DAISIFNRLLGTSPTPSIIEFGQIPSAFSV 70
F +V K +H + +I D D S +N + ++E ++ +V
Sbjct: 120 FRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNV 179
Query: 71 LGKILKKGYRPDAVTLTTLI-KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC 129
+G G+ + LI +G G + ++ + G + SY + +C
Sbjct: 180 IGN----GFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVV 189
+ G+ +++L ++++ +K +VV YNT+I ++ + V +F EM + P+V
Sbjct: 236 KSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 295
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
T+N+++ C G++++A +LDEM ++ PD IT+ L L K E ++ M
Sbjct: 296 THNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRM 352
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
++ GV+P + TY LM + + + + +M + G TP+ +Y+ +I L + M+
Sbjct: 353 IRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGML 412
Query: 310 DEALNLFAEM 319
D A EM
Sbjct: 413 DMAREYEEEM 422
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 109/222 (49%), Gaps = 9/222 (4%)
Query: 73 KILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
K+ +G D + + + +C G+ +A++ + ++ +R +L+ V+Y T+I+ +
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+++ R++ +PNV +NTII LC+D + DA+ + EM + PD +TY
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY- 332
Query: 193 SLLYGFCIVGQLKEATELLD---EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
C+ +L++ +E+L M R + P + T+ L+ + G ++ V M
Sbjct: 333 -----MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTM 387
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ G PD YN+++D ++ A M +RG++P
Sbjct: 388 KESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 174/382 (45%), Gaps = 9/382 (2%)
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGF-RLNQVSYGTLIKGLCRMGQTRASLQLLRQ 143
T+T + L K + +AL+ D + + F + + +Y L+ L + GQ + +L +
Sbjct: 90 TVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDE 149
Query: 144 VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM-VVKKVSPDVVTYNSLLYGFCIVG 202
+ ++P V +Y ++ + + L+ DAF++ +M + PDV TY++LL
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDAS 209
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM-KQGVKPDLFTY 261
Q L EM + I P+ +T N ++ G+ G + + VL+ M+ KPD++T
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 269
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N ++ + + +I+ + G+ P +++I+I K +M D+ ++ M
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRK 329
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS---HH 378
++ T TY+++I+ G + D+M ++G AD T+ L++ + H
Sbjct: 330 LEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHK 389
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
V ++ L K I + YN ++ K L + V+ + + RT+ I
Sbjct: 390 VISSVQLAAKFE---IPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEI 446
Query: 439 MINGLCKEGLFDEALALLSEME 460
M+ KEG+ D+ L E +
Sbjct: 447 MVEAYEKEGMNDKIYYLEQERQ 468
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 5/273 (1%)
Query: 203 QLKEATELLDEMTRKNI-GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
Q +A E+ D + + P T+ L+ LGK G A+ + M+++G++P + Y
Sbjct: 103 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 162
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQ-RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
+L+ Y N I+ A +IL+ M P+V +YS ++ D +L+ EM+
Sbjct: 163 TALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMD 222
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM--HNKGQPADKFTYNSLLDVLCKSHH 378
I P+T+T + ++ G + GR +++ +M +P D +T N +L V
Sbjct: 223 ERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKP-DVWTMNIILSVFGNMGK 281
Query: 379 VDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI 438
+D + +K R+ GI+P+ T+NIL+ K+ V + + + T TYN
Sbjct: 282 IDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNN 341
Query: 439 MINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
+I G +M +G D TF
Sbjct: 342 IIEAFADVGDAKNMELTFDQMRSEGMKADTKTF 374
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 162/387 (41%), Gaps = 44/387 (11%)
Query: 158 TIIDSLCKDKLVS--DAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
T+ D + K + + + F++ E P TY LL GQ A +L DEM
Sbjct: 94 TLSDLIAKKQWLQALEVFDMLREQTF--YQPKEGTYMKLLVLLGKSGQPNRAQKLFDEML 151
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK-QGVKPDLFTYNSLMDGYCLVNEI 274
+ + P V + L+ A + + +A ++L M +PD+FTY++L+ ++
Sbjct: 152 EEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQF 211
Query: 275 NKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSS 333
+ ++ M +R +TPN + +I++ G + D+ + ++M PD T +
Sbjct: 212 DLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNI 271
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
++ G+I ++ N G + T+N L+ K DK ++ + MR
Sbjct: 272 ILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLE 331
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
TYN +++ G KN + F + +G +T+ +ING GLF + +
Sbjct: 332 FPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVI 391
Query: 454 -------------------ALLS----------------EMEDKGCIPDAITFETIICAL 478
A++S M+++ C+ D+ TFE ++ A
Sbjct: 392 SSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAY 451
Query: 479 FEKGDN---YKAEKLLREMMARGLLEK 502
++G N Y E+ +++M R + K
Sbjct: 452 EKEGMNDKIYYLEQERQKLMDRTVATK 478
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 132/331 (39%), Gaps = 6/331 (1%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ--- 118
GQ A + ++L++G P T L+ + A D + + F Q
Sbjct: 138 GQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM--KSFPQCQPDV 195
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+Y TL+K Q L ++++ L+ PN V N ++ + + S+
Sbjct: 196 FTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSD 255
Query: 179 MVVKKV-SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
M+V PDV T N +L F +G++ ++ I P+ TFN L+ + GK+
Sbjct: 256 MLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKR 315
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+ +V+ M K TYN++++ + V + + M G+ + ++
Sbjct: 316 MYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFC 375
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK 357
+I+G + + ++ +I +T Y+++I K+ + + M +
Sbjct: 376 CLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKER 435
Query: 358 GQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
D T+ +++ K DK L ++
Sbjct: 436 QCVCDSRTFEIMVEAYEKEGMNDKIYYLEQE 466
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 186/429 (43%), Gaps = 44/429 (10%)
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH-LVKPN--VVMYNTI 159
QF + + R + LI L ++G R LQ++ ++ K N ++Y T
Sbjct: 454 WQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTA 513
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVS-PDVVTYNSLLYGFCIVGQLKEATELLDEMTRK- 217
++ L K + +A N+F M+++ S PD+V Y S+ G +KE ++D M
Sbjct: 514 LNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPP 573
Query: 218 --------------NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
+ PDV+ +N +++A + + A VL + ++G KP TY
Sbjct: 574 KKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGL 633
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK 323
+M+ + N M Q+ PN +Y ++++ L K DEA++ +ME
Sbjct: 634 IMEVMLACEKYNLVHEFFRKM-QKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRG 692
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
I+ Y L LC +GR + +V+ + + + +++ K+ V
Sbjct: 693 IVGSAALYYDLARCLCSAGRCNEGLNMVNFV-------NPVVLKLIENLIYKADLVHTIQ 745
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
KK+ +P VVTY L+ G +KNA +F D + K + T NIM+
Sbjct: 746 FQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIF-DQMKKVCSPNLVTCNIMLKAY 804
Query: 444 CKEGLFDEALALLSEMEDKG------------CIPDAITFETII--CALFEKGDNYKAEK 489
+ GLF+EA L +M + G +PD TF T++ CA EK D++
Sbjct: 805 LQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGY-- 862
Query: 490 LLREMMARG 498
REM+ G
Sbjct: 863 AYREMLRHG 871
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMEC-IKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
Y+ ++ L K++ EALN+F M I PD + Y S+ L ++G I + ++D M
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTM 569
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
+ P KF K L K D ++PDVV YN +++ + +
Sbjct: 570 --RSPPKKKF----------------KPTTLEKW--DPRLEPDVVVYNAVLNACVQRKQW 609
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETI 474
+ A V Q L +G + TY +++ + ++ +M+ K IP+A+ + +
Sbjct: 610 EGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQ-KSSIPNALAYRVL 668
Query: 475 ICALFEKGDNYKAEKLLREMMARGLL 500
+ L+++G + +A + +M +RG++
Sbjct: 669 VNTLWKEGKSDEAVHTVEDMESRGIV 694
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 29/246 (11%)
Query: 42 AISIFNRLLGTSPTPSIIEFGQIPSA------FSVLGKILKKGYR---PDAVTLTTLIKG 92
A + +L PS + +G I ++++ + +K + P+A+ L+
Sbjct: 612 AFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNT 671
Query: 93 LCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPN 152
L +G+ A+ +D+ +RG + Y L + LC G+ L ++ V N
Sbjct: 672 LWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFV-------N 724
Query: 153 VVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD 212
V+ I + + K LV ++ P VVTY L+ G +K A + D
Sbjct: 725 PVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFD 784
Query: 213 EMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG------------VKPDLFT 260
+M +K P+++T N ++ A + G +EA+ + M + G V PD +T
Sbjct: 785 QM-KKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYT 843
Query: 261 YNSLMD 266
+N+++D
Sbjct: 844 FNTMLD 849
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 183/409 (44%), Gaps = 37/409 (9%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D + T++ G G V A D + + N VS+ L+ + + + L
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLF 211
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+ E + V +N ++ K K + +A F M V+ DVV++N+++ G+
Sbjct: 212 KSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQS 263
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
G++ EA +L DE + DV T+ +V + V+EA+ + M ++ + ++
Sbjct: 264 GKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSW 315
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
N+++ GY + A + + M R NV +++ +I G + + EA NLF +M
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMP- 370
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDK 381
D ++++++I G +SG A L +M +G ++ +++S L ++
Sbjct: 371 ---KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
L ++ G + N L+ CK G ++ A ++F+++ K + ++N MI
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIA 483
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA-----LFEKGDNY 485
G + G + AL M+ +G PD T ++ A L +KG Y
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 532
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 193/425 (45%), Gaps = 73/425 (17%)
Query: 115 RLNQVSYGTL--IKGLCRMGQTRASLQLLR-----QVEGHLVKP-------NVVMYNTII 160
R Q+ Y +L +K C A+ L+ Q++ KP ++ +N I
Sbjct: 12 RAQQLHYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAI 71
Query: 161 DSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG 220
S + ++A +F M V+YN ++ G+ G+ + A +L DEM +
Sbjct: 72 SSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLFDEMPER--- 124
Query: 221 PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI 280
D++++N ++ + N+ +A+ + +M ++ D+ ++N+++ GY ++ A ++
Sbjct: 125 -DLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSV 179
Query: 281 LNSMAQRG-VTPN--------------------------VHSYSIIIHGLCKNKMVDEAL 313
+ M ++ V+ N + S++ ++ G K K + EA
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
F M + D ++++++I G +SG+I A +L DE D FT+ +++
Sbjct: 240 QFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGY 291
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
++ V++A L KM ++ + V++N ++ G + R++ A+E+F + + V
Sbjct: 292 IQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NV 343
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLRE 493
T+N MI G + G EA L +M + D +++ +I + G +++A +L +
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 494 MMARG 498
M G
Sbjct: 400 MEREG 404
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 179/444 (40%), Gaps = 34/444 (7%)
Query: 58 IIEFGQIPSAFSVLGKI------LKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVA 111
++ + I + ++ GKI + D T T ++ G V A + D +
Sbjct: 250 VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 112 RGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKP--NVVMYNTIIDSLCKDKLV 169
R N+VS+ ++ G + + + +L V P NV +NT+I + +
Sbjct: 310 R----NEVSWNAMLAGYVQGERMEMAKELFD------VMPCRNVSTWNTMITGYAQCGKI 359
Query: 170 SDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTL 229
S+A NLF +M + D V++ +++ G+ G EA L +M R+ + +F++
Sbjct: 360 SEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 230 VDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGV 289
+ ++ K + ++K G + F N+L+ YC I +A + MA + +
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
S++ +I G ++ + AL F M+ + PD T +++ +G + +
Sbjct: 476 V----SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 350 LVDEM-HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
M + G + Y ++D+L ++ ++ A L K M +PD + L+
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM---PFEPDAAIWGTLLGAS 588
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGC--IP 466
G + A E D + Y ++ N G + + L M DKG +P
Sbjct: 589 RVHGNTELA-ETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 467 DAITFETI-ICALFEKGDNYKAEK 489
E F GD + EK
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEK 671
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 131/254 (51%), Gaps = 1/254 (0%)
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR-KNIGPDVITF 226
++ + +F ++ ++S V + N+LL+ + KEA + EM + I PD+ T+
Sbjct: 131 MLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETY 190
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
N ++ + G+ + +++A M ++G+KP+ ++ ++ G+ ++ ++ +L M
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKD 250
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
RGV V +Y+I I LCK K EA L M + P+T+TYS LI G C
Sbjct: 251 RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEE 310
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A +L M N+G D Y +L+ LCK + A++L K+ ++ P L++
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 407 GLCKEGRLKNAQEV 420
GL K+ +++ A+E+
Sbjct: 371 GLAKDSKVEEAKEL 384
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 6/313 (1%)
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ---LKEATEL 210
+ ++ +++L + K S NL + + PD+ + + + Q L + +
Sbjct: 81 IAFSAAVENLAEKKHFSAVSNLLDGFIENR--PDLKSERFAAHAIVLYAQANMLDHSLRV 138
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ-GVKPDLFTYNSLMDGYC 269
++ + I V + N L+ A + KEAK V M K G++PDL TYN ++ +C
Sbjct: 139 FRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFC 198
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ + +I+ M ++G+ PN S+ ++I G DE + A M+ +
Sbjct: 199 ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVS 258
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
TY+ I LCK + A L+D M + G + TY+ L+ C ++A L K M
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIM 318
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
++G +PD Y L+ LCK G + A + ++ + K + + ++NGL K+
Sbjct: 319 VNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKV 378
Query: 450 DEALALLSEMEDK 462
+EA L+ ++++K
Sbjct: 379 EEAKELIGQVKEK 391
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 165/401 (41%), Gaps = 22/401 (5%)
Query: 2 MLSSPRVSMSSFLRLNNFPVVSKPSFHSHSLSP-------SIHNADDAISIFNRLLGTSP 54
+LS R S S F LN P + S S LSP S + A+S LL +
Sbjct: 3 LLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALS----LLKSEK 58
Query: 55 TPS-IIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARG 113
P I+E + S L R D + + ++ L K D +
Sbjct: 59 DPDRILEICRAAS--------LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENR 110
Query: 114 FRLNQVSYGT-LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
L + I + SL++ R +E + V N ++ + K +A
Sbjct: 111 PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEA 170
Query: 173 FNLFSEMV-VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
++ EM + + PD+ TYN ++ FC G + ++ EM RK I P+ +F ++
Sbjct: 171 KRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS 230
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
E E VLA+M +GV + TYN + C + +A A+L+ M G+ P
Sbjct: 231 GFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKP 290
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
N +YS +IHG C +EA LF M PD+ Y +LI LCK G A L
Sbjct: 291 NTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLC 350
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
E K SL++ L K V++A L +++++
Sbjct: 351 KESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
++P++ YN +I C+ S ++++ +EM K + P+ ++ ++ GF + E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
++L M + + V T+N + +L K KEAK +L M+ G+KP+ TY+ L+ G+
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 269 CLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDT 328
C ++ +A + M RG P+ Y +I+ LCK + AL+L E +P
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 329 ITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYN 367
SL++GL K ++ A EL+ GQ +KFT N
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELI------GQVKEKFTRN 395
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 14/287 (4%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL----FTYNSLMDGYCLVNEINKA 277
D I F+ V+ L ++ + N+L ++ +PDL F ++++ Y N ++ +
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIEN--RPDLKSERFAAHAIV-LYAQANMLDHS 135
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLID 336
+ + + + ++ V S + ++ K EA ++ EM + I PD TY+ +I
Sbjct: 136 LRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIK 195
Query: 337 GLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLC---KSHHVDKAIALTKKMRDQG 393
C+SG S ++ +V EM KG + ++ ++ KS V K +A+ M+D+G
Sbjct: 196 VFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM---MKDRG 252
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
+ V TYNI + LCK + K A+ + ++ G TY+ +I+G C E F+EA
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
L M ++GC PD+ + T+I L + GD A L +E M + +
Sbjct: 313 KLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%)
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
G+ P++ +Y+ +I C++ + ++ AEME I P++ ++ +I G +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+++ M ++G TYN + LCK +A AL M G++P+ VTY+ L+ G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
C E + A+++F+ +V +G Y +I LCK G F+ AL+L E +K +P
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 468 AITFETIICALFEKGDNYKAEKLL 491
++++ L + +A++L+
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELI 385
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 190/490 (38%), Gaps = 93/490 (18%)
Query: 28 HSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLT 87
H+ + +HN + A+S SP F +P A SV I + P+ +
Sbjct: 53 HAQMIKIGLHNTNYALSKLIEFCILSP-----HFEGLPYAISVFKTIQE----PNLLIWN 103
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
T+ +G L + AL+ + +++ G N ++ ++K + + +Q+ GH
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG----QQIHGH 159
Query: 148 LVK-----------------------------------PNVVMYNTIIDSLCKDKLVSDA 172
++K +VV Y +I + +A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
LF E+ VK DVV++N+++ G+ G KEA EL +M + N+ PD T T+V A
Sbjct: 220 QKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
+ G+++ + V + G +L N+L+D Y E+ A + + + V
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI-- 333
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
S++ +I G + EAL LF EM P+ +T S++ G I
Sbjct: 334 --SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID------- 384
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
+ + I + R +G+ L+D K G
Sbjct: 385 --------------------------IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
++ A +VF ++ H ++ ++N MI G G D + L S M G PD ITF
Sbjct: 419 DIEAAHQVFNSIL----HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 473 TIICALFEKG 482
++ A G
Sbjct: 475 GLLSACSHSG 484
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 157/337 (46%), Gaps = 21/337 (6%)
Query: 54 PTPSIIEFGQIPSAFS----------VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRAL 103
P +I+ + I SA++ + ++ K +PD V L +++ ++++
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 104 QFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
H VV G + +L + GQ + L +++ PN++++N +I
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK----SPNLILWNAMISGY 298
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
K+ +A ++F EM+ K V PD ++ S + VG L++A + + + R + DV
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV 358
Query: 224 ITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
+ L+D K G+V+ A+ ++ + + D+ +++++ GY L +AI++ +
Sbjct: 359 FISSALIDMFAKCGSVEGAR----LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
M + GV PN ++ ++ + MV E F M KI P Y+ +ID L ++G
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGH 474
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
+ A+E++ M QP + +LL K HV+
Sbjct: 475 LDQAYEVIKCM--PVQPGVT-VWGALLSACKKHRHVE 508
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 199/455 (43%), Gaps = 26/455 (5%)
Query: 46 FNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQF 105
F+ L T + FG I A V + RP +I+G + AL
Sbjct: 51 FSGFLITKLIHASSSFGDITFARQVFDDLP----RPQIFPWNAIIRGYSRNNHFQDALLM 106
Query: 106 HDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK----PNVVMYNTIID 161
+ ++ + ++ L+K + LQ+ R V + + +V + N +I
Sbjct: 107 YSNMQLARVSPDSFTFPHLLKACSGLSH----LQMGRFVHAQVFRLGFDADVFVQNGLIA 162
Query: 162 SLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP 221
K + + A +F + + + + +V++ +++ + G+ EA E+ +M + ++ P
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERT--IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQG--VKPDLFTYNSLMDGYCLVNEINKAIA 279
D + ++++A ++K+ +++ A ++K G ++PDL SL Y ++ A
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKI 278
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+ + M +PN+ ++ +I G KN EA+++F EM + PDTI+ +S I
Sbjct: 279 LFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
+ G + A + + + D F ++L+D+ K V+ A + + D+ + DVV
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA----RLVFDRTLDRDVV 390
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
++ ++ G GR + A +++ + G H T+ ++ G+ E + M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
D P + +I L G +A ++++ M
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 205/470 (43%), Gaps = 59/470 (12%)
Query: 40 DDAISIFNR------LLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGL 93
+DA+ + N L TS + + A ++ G +P+ T + ++ L
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS-L 334
Query: 94 CLKGEVRRALQF----HDDVVARGFRLNQVSYGTLIKGL---CRMGQTRASLQLLRQVEG 146
C R+L F H + GF + G + + C + AS +V G
Sbjct: 335 C---SAVRSLDFGKQIHSQTIKVGFE-DSTDVGNALVDMYMKCSASEVEAS-----RVFG 385
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE 206
+V PNVV + T+I L V D F L EMV ++V P+VVT + +L + ++
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRR 445
Query: 207 ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
E+ + R+++ +++ N+LVDA V A NV+ M ++ D TY SL+
Sbjct: 446 VLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVT 501
Query: 267 GYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
+ + + A++++N M G+ + + + G AL + C +
Sbjct: 502 RFNELGKHEMALSVINYMYGDGIRMD----QLSLPGFISASANLGALETGKHLHCYSVKS 557
Query: 327 D----TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKA 382
+SL+D K G + A ++ +E+ D ++N L+ L + + A
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI----ATPDVVSWNGLVSGLASNGFISSA 613
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNI---- 438
++ ++MR + +PD VT+ IL+ C GRL DL ++ + V + YNI
Sbjct: 614 LSAFEEMRMKETEPDSVTFLILLSA-CSNGRL-------TDLGLEYFQVMKKIYNIEPQV 665
Query: 439 -----MINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
++ L + G +EA ++ M K P+A+ F+T++ A +G+
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETMHLK---PNAMIFKTLLRACRYRGN 712
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 156/369 (42%), Gaps = 34/369 (9%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++ +I + + ++L L ++ PN +++++ S + +S + +
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV 150
Query: 180 VVKKVSPDVVTYNSL--LYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
+ + V +SL LY C GQ KEA EL + D I++ ++ +L
Sbjct: 151 IKTGFEGNSVVGSSLSDLYSKC--GQFKEACELFSSLQN----ADTISWTMMISSLVGAR 204
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN-EINKAIAILNSMAQRGVTPNVHSY 296
+EA + M+K GV P+ FT+ L+ + E K I +++ RG+ NV
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIH--SNIIVRGIPLNV--- 259
Query: 297 SIIIHGLCKNKMVDEALNLFAEME-CIKII-----PDTITYSSLIDGLCKSGRISHAWEL 350
+ K +VD + F++ME ++++ D ++S++ G ++ R A
Sbjct: 260 ------VLKTSLVD-FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL-- 408
EM + G + FTY+++L + +D + + G + N L+D
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDA 468
C ++ A VF +V V ++ +I GL G + LL EM + P+
Sbjct: 373 CSASEVE-ASRVFGAMV----SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNV 427
Query: 469 ITFETIICA 477
+T ++ A
Sbjct: 428 VTLSGVLRA 436
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 161/406 (39%), Gaps = 47/406 (11%)
Query: 125 IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV 184
I C +R L + V + N+ + N ++ K + +A LF EM + V
Sbjct: 30 ILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKN 244
+ ++ F + A L +EM P+ TF+++V + ++
Sbjct: 90 ----FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGR 145
Query: 245 VLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC 304
V ++K G + + +SL D Y + +A + +S+ + S++++I L
Sbjct: 146 VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN----ADTISWTMMISSLV 201
Query: 305 KNKMVDEALNLFAEMECIKIIPDTITYSSLID-----GLCKSGRISHA------------ 347
+ EAL ++EM + P+ T+ L+ GL + G+ H+
Sbjct: 202 GARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVV 260
Query: 348 --WELVD------------EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
LVD + N D F + S++ ++ +A+ +MR G
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 394 IQPDVVTYNILMDGLCKEGR-LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD-E 451
+QP+ TY+ ++ LC R L +++ + G+ + N +++ K + E
Sbjct: 321 LQPNNFTYSAILS-LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE 379
Query: 452 ALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
A + M P+ +++ T+I L + G LL EM+ R
Sbjct: 380 ASRVFGAMVS----PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 195/460 (42%), Gaps = 51/460 (11%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
GY D T T+L+ ++ QFH ++ + N L+ + G +
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG----A 478
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
L+ RQ+ + + V +NTII S +D+ S+AF+LF M + + D S L
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
V L + ++ + + D+ T ++L+D K G +K+A+ V + + + V
Sbjct: 539 CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV--- 595
Query: 258 LFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK------------ 305
+ N+L+ GY N + +A+ + M RGV P+ +++ I+ K
Sbjct: 596 -VSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHG 653
Query: 306 ------------------------NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKS 341
++ + EA LF+E+ K I + ++ ++ G ++
Sbjct: 654 QITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI---VLWTGMMSGHSQN 710
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
G A + EM + G D+ T+ ++L V + + A+ + D +T
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
N L+D K G +K + +VF ++ + V ++N +ING K G ++AL + M
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 462 KGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLE 501
+PD ITF ++ A G K+ M+ + +E
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIE 867
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 184/435 (42%), Gaps = 21/435 (4%)
Query: 43 ISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRA 102
++ +N +L S SI + G++ +F L + P+ T + ++ + V
Sbjct: 125 VTAWNSML--SMYSSIGKPGKVLRSFVSL---FENQIFPNKFTFSIVLSTCARETNVEFG 179
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDS 162
Q H ++ G N G L+ + + + R+V +V PN V + +
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA----RRVFEWIVDPNTVCWTCLFSG 235
Query: 163 LCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD 222
K L +A +F M + PD + + +++ + +G+LK+A L EM+ PD
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPD 291
Query: 223 VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILN 282
V+ +N ++ GK G A M K VK T S++ +V ++ + +
Sbjct: 292 VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA 351
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSG 342
+ G+ N++ S ++ K + ++ A +F +E + + ++++I G +G
Sbjct: 352 EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE----EKNDVFWNAMIRGYAHNG 407
Query: 343 RISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
EL +M + G D FT+ SLL SH ++ + + + ++ N
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 403 ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK 462
L+D K G L++A+++F+ + + T+N +I ++ EA L M
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDN----VTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 463 GCIPDAITFETIICA 477
G + D + + A
Sbjct: 524 GIVSDGACLASTLKA 538
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 186/448 (41%), Gaps = 62/448 (13%)
Query: 40 DDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGK------ILKKGYRPDAVTLTTLIKGL 93
++A+ +F R+ P + F + + + LGK + + PD V +I G
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH 302
Query: 94 CLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK--- 150
+G A+++ ++ + + + G+++ + A+L L V +K
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI----GIVANLDLGLVVHAEAIKLGL 358
Query: 151 -PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATE 209
N+ + ++++ K + + A +F + K + V +N+++ G+ G+ + E
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK----NDVFWNAMIRGYAHNGESHKVME 414
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
L +M D TF +L+ +++ ++++K+ + +LF N+L+D Y
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ A I M R NV +++ II +++ EA +LF M I+ D
Sbjct: 475 KCGALEDARQIFERMCDR---DNV-TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 330 TYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+S + K+ H ++H L V C
Sbjct: 531 CLASTL----KACTHVHGLYQGKQVH-------------CLSVKC--------------- 558
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
G+ D+ T + L+D K G +K+A++VF L +V + N +I G + L
Sbjct: 559 ---GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP----EWSVVSMNALIAGYSQNNL- 610
Query: 450 DEALALLSEMEDKGCIPDAITFETIICA 477
+EA+ L EM +G P ITF TI+ A
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEA 638
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 166/404 (41%), Gaps = 66/404 (16%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFS---------VLGKILKKGYRPDAVTLTTLIK 91
DA +F+ L P S++ + + +S + ++L +G P +T T+++
Sbjct: 582 DARKVFSSL----PEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 92 GLCLKGE-VRRALQFHDDVVARGFRLNQVSYGTLIKGLC--RMGQTRASLQLLRQVEGHL 148
C K E + QFH + RGF G + G+ G T A L
Sbjct: 638 A-CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF-----SEL 691
Query: 149 VKP-NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY---------------- 191
P ++V++ ++ ++ +A + EM V PD T+
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 192 -------------------NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
N+L+ + G +K ++++ DEM R++ +V+++N+L++
Sbjct: 752 RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLING 808
Query: 233 LGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM-AQRGVTP 291
K G ++A + M + + PD T+ ++ +++ I M Q G+
Sbjct: 809 YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEA 868
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
V + ++ L + + EA + F E + +K PD +SSL+ G C+ E+
Sbjct: 869 RVDHVACMVDLLGRWGYLQEADD-FIEAQNLK--PDARLWSSLL-GACRIHGDDIRGEIS 924
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ 395
E + +P + Y L ++ +KA AL K MRD+G++
Sbjct: 925 AEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 137/354 (38%), Gaps = 46/354 (12%)
Query: 157 NTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR 216
N I+D K VS ++E + DV +NS+L + +G+ + +
Sbjct: 99 NAIVDLYAKCAQVS-----YAEKQFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE 153
Query: 217 KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG----------------------- 253
I P+ TF+ ++ +E NV+ + + M+K G
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 254 --------VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
V P+ + L GY +A+ + M G P+ ++ +I+ +
Sbjct: 214 ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+ +A LF EM PD + ++ +I G K G + A E M + + T
Sbjct: 274 LGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRST 329
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
S+L + ++D + + + G+ ++ + L+ K +++ A +VF+ L
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII--CA 477
K +N MI G G + + L +M+ G D TF +++ CA
Sbjct: 390 EK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 191/452 (42%), Gaps = 42/452 (9%)
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV- 144
L L+ LC K + + A + D++ G +Y I+ L + G L+++
Sbjct: 289 LGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKIS 348
Query: 145 --EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVG 202
EG + V YN+++ L K+ + +++ +EM+V+ VSP+ T N+ L FC G
Sbjct: 349 PLEG--CELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAG 406
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
+ EA EL + P +++N L+ L +V++A +VL + +G T++
Sbjct: 407 FVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFS 466
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECI 322
+L + C + + A ++ + A+R + P + II LC V++AL +
Sbjct: 467 TLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKS 526
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK------- 375
+ ++SLI G R A +L+ M KG + Y +++ +C+
Sbjct: 527 GVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKN 586
Query: 376 -------------SHHVD---------------KAIALTKKMRDQ-GIQPDVVTYNILMD 406
H V K L M D+ GI P V + +++
Sbjct: 587 FFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQ 646
Query: 407 GLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
K ++ +A F DL +G R Y +MI GLCK D+A+ L EM+ +G P
Sbjct: 647 SYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQP 705
Query: 467 DAITFETIICALFEKGDNYKAEKLLREMMARG 498
+E I L + +A L+ E G
Sbjct: 706 SIECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 192/477 (40%), Gaps = 23/477 (4%)
Query: 2 MLSSPRVSMSSFLRLNNFPVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEF 61
+LS R + L+ ++ +P FH H +IF L G +I+F
Sbjct: 118 VLSHTRYDILCCLKFFDW-AARQPGFH--------HTRATFHAIFKILRGAKLVTLMIDF 168
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
F L+ L+ G + G ALQ ++ RG L+ Y
Sbjct: 169 LDRSVGFESCRHSLR--------LCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGY 220
Query: 122 GTLIKGLCRMGQTRASLQLLRQ--VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
L+ L + + Q V G + V ++ ++ CK + +A + +
Sbjct: 221 HVLLNALVEEKCFDSFDVIFDQISVRGFVC---AVTHSILVKKFCKQGKLDEAEDYLRAL 277
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
+ + L+ C + +EAT+LLDE+ +N + AL K G +
Sbjct: 278 LPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFL 337
Query: 240 KEAKNVLAVMMK-QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
+ L + +G + ++F YNS++ N ++ IL M RGV+PN + +
Sbjct: 338 NNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNA 397
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+ CK VDEAL L+ I P ++Y+ LI LC + + A++++ ++G
Sbjct: 398 ALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRG 457
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
T+++L + LC D A L ++ + P + ++ LC G++++A
Sbjct: 458 HFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL 517
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ + G + + + +I G D A L+ M++KG P + +I
Sbjct: 518 MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 574
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 176/432 (40%), Gaps = 46/432 (10%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G+ P A++ LI LC V +A + RG L ++ TL LC G+ +
Sbjct: 422 GFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMA 481
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK-VSPDVVTYNSLLY 196
+L+ + P + II +LC V DA + +E+ K V + SL+Y
Sbjct: 482 RELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL-MINELFNKSGVDTSFKMFTSLIY 540
Query: 197 GFCIVGQLKEATELLDEMTRKNIGP----------------------------------- 221
G + + A +L+ M K P
Sbjct: 541 GSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWE 600
Query: 222 -DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI 280
V +N ++ G G K A+ V +M + G+ P + + ++ Y +I A+
Sbjct: 601 HKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHF 660
Query: 281 LNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK 340
+ + ++G T Y ++I GLCK +D+A++ EM+ + P Y I LC
Sbjct: 661 FHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCN 719
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVT 400
+ A LV+E G+ F N LL KS V +A + + D+ P++ +
Sbjct: 720 EEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK--IPEMKS 777
Query: 401 YNILMDGLCKEGRLKNAQEV--FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
L+ GL GR+ E+ +++ K Y + + TYN+++ + ++A ++
Sbjct: 778 LGELI-GLF-SGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQA-EDAYEMVER 834
Query: 459 MEDKGCIPDAIT 470
+ +G +P+ T
Sbjct: 835 IARRGYVPNERT 846
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 223 VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILN 282
+T + LV K+G + EA++ L ++ L+D C + +A +L+
Sbjct: 251 AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLD 310
Query: 283 SMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP-DTITYSSLIDGLCKS 341
+ G +Y+I I L K ++ + ++ ++ + Y+S++ L K
Sbjct: 311 EIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKE 370
Query: 342 GRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTY 401
+ ++++ EM +G +K T N+ L CK+ VD+A+ L + + G P ++Y
Sbjct: 371 NNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSY 430
Query: 402 NILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
N L+ LC ++ A +V + + +G+ + +T++ + N LC +G D A L+ +
Sbjct: 431 NYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAE 490
Query: 462 KGCIPDAITFETIICALFEKG 482
+ +P I II AL + G
Sbjct: 491 RDLLPKRIAGCKIISALCDVG 511
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/448 (19%), Positives = 174/448 (38%), Gaps = 74/448 (16%)
Query: 64 IPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGT 123
+ + +L +++ +G P+ T+ + C G V AL+ + GF +SY
Sbjct: 373 LDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNY 432
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
LI +LC ++ V A+++ + +
Sbjct: 433 LIH-----------------------------------TLCANESVEQAYDVLKGAIDRG 457
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
T+++L C G+ A EL+ +++ P I ++ AL G V++A
Sbjct: 458 HFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL 517
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+ + K GV + SL+ G + + A ++ M ++G TP Y +I +
Sbjct: 518 MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCV 577
Query: 304 CKNKMVD-------------------EALNLFAE-----------------MECIKIIPD 327
C+ + + +A NLF E M+ I P
Sbjct: 578 CEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPT 637
Query: 328 TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTK 387
+ ++ K+ +I+ A ++ +G+ + Y ++ LCK++ +D A+ +
Sbjct: 638 VASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLE 696
Query: 388 KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEG 447
+M+ +G+QP + Y + + LC E + A + + G +T N++++ K
Sbjct: 697 EMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSK 756
Query: 448 LFDEALALLSEMEDKGCIPDAITFETII 475
EA + +EDK IP+ + +I
Sbjct: 757 GVYEAWTRMRNIEDK--IPEMKSLGELI 782
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 142/312 (45%), Gaps = 2/312 (0%)
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
++L+ G+ + G+ A + M + + D ++ L++AL +E + +
Sbjct: 186 DALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISV 245
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
+G + T++ L+ +C ++++A L ++ I++ LC + E
Sbjct: 246 RGFVCAV-THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQE 304
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN-KGQPADKFTYNSLL 370
A L E++ + + Y+ I L K+G +++ + + ++ +G + F YNS++
Sbjct: 305 ATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMV 364
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
L K +++D + +M +G+ P+ T N + CK G + A E+++ G+
Sbjct: 365 FQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFA 424
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
T +YN +I+ LC ++A +L D+G TF T+ AL KG A +L
Sbjct: 425 PTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAREL 484
Query: 491 LREMMARGLLEK 502
+ R LL K
Sbjct: 485 VIAAAERDLLPK 496
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 108/238 (45%), Gaps = 11/238 (4%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
+ G P + +++ ++ AL F D+ +G + + Y +I GLC+ +
Sbjct: 631 RDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLD 689
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY--NS 193
++ L +++G ++P++ Y I LC ++ +A L +E +K + + N
Sbjct: 690 DAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEF--RKSGRRITAFIGNV 747
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
LL+ + EA + + K P++ + L+ +++ L ++++
Sbjct: 748 LLHNAMKSKGVYEAWTRMRNIEDKI--PEMKSLGELIGLFSGRIDMEVELKRLDEVIEKC 805
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
D++TYN L+ ++N+ A ++ +A+RG PN + I+ N++++E
Sbjct: 806 YPLDMYTYNMLLR-MIVMNQAEDAYEMVERIARRGYVPNERTDMILERA---NRILEE 859
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 144/319 (45%), Gaps = 32/319 (10%)
Query: 123 TLIKGLCRMGQTRASLQLLRQVEG-HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+ I L R G+ + ++E + +K + ++ LC+ S A +
Sbjct: 180 SAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN-TA 238
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKE 241
++ PD + L+ G+CI +L EAT L EM+R +N ++D + K K
Sbjct: 239 NEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKK- 297
Query: 242 AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIH 301
D + L E+ K +L M RGV N +++++I+
Sbjct: 298 ------------------------DPFKLQPEVEK---VLLEMEFRGVPRNTETFNVLIN 330
Query: 302 GLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK--GQ 359
LCK + +EA+ LF M PD TY LI L ++ RI E++D+M + G+
Sbjct: 331 NLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGE 390
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
+K Y L +LC ++ A+++ K M+ G +P + TY++LM +C +L A
Sbjct: 391 LLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANG 450
Query: 420 VFQDLVIKGYHVTVRTYNI 438
++++ KG V+ + Y +
Sbjct: 451 LYKEAAKKGIAVSPKEYRV 469
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 11/285 (3%)
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQ-GVKPDLFTYNSLMDGYCLVNEINKAIAILNS 283
T + +D L + G K+ + M G+K D + ++ C + A ++ +
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
A + P+ + ++I G C + +DEA L EM T Y+ ++D +CK R
Sbjct: 237 TANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 295
Query: 344 ISHAWELVDE-------MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP 396
++L E M +G P + T+N L++ LCK ++A+ L +M + G QP
Sbjct: 296 KKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQP 355
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH--VTVRTYNIMINGLCKEGLFDEALA 454
D TY +L+ L + R+ E+ + GY + + Y + LC + A++
Sbjct: 356 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMS 415
Query: 455 LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ M+ GC P T++ ++ + +A L +E +G+
Sbjct: 416 VFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 9/227 (3%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
PD LI G C+ ++ A + ++ GF + +Y ++ +C++ + + +L
Sbjct: 243 PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKL 302
Query: 141 LRQVEGHL-------VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
+VE L V N +N +I++LCK + +A LF M PD TY
Sbjct: 303 QPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLV 362
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGP--DVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
L+ ++ E E++D+M G + + + L ++ A +V M
Sbjct: 363 LIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKA 422
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
G KP + TY+ LM C N++ +A + A++G+ + Y +
Sbjct: 423 NGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 11/273 (4%)
Query: 201 VGQLKEATELLDEMTRK-NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
G+ K+ T+ ++M + D + +V L ++G+ A+ ++ + + PD
Sbjct: 188 AGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE-IFPDEN 246
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK-------NKMVDEA 312
+ L+ G+C+ ++++A + M++ G +Y++++ +CK K+ E
Sbjct: 247 ICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEV 306
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
+ EME + +T T++ LI+ LCK R A L M G D TY L+
Sbjct: 307 EKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRS 366
Query: 373 LCKSHHVDKAIALTKKMRDQGIQP--DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
L ++ + + + KM+ G + Y + LC RL++A VF+ + G
Sbjct: 367 LYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCK 426
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
++TY++++ +C A L E KG
Sbjct: 427 PGIKTYDLLMGKMCANNQLTRANGLYKEAAKKG 459
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 10/250 (4%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G + D +LT ++K LC KG A + + F + LI G C + +
Sbjct: 206 GLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENIC-DLLISGWCIAEKLDEA 264
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL-------FSEMVVKKVSPDVVT 190
+L ++ + YN ++D +CK D F L EM + V + T
Sbjct: 265 TRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTET 324
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
+N L+ C + + +EA L M PD T+ L+ +L + + E ++ M
Sbjct: 325 FNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMK 384
Query: 251 KQGVKPDLFT--YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
G L Y + C + + A+++ SM G P + +Y +++ +C N
Sbjct: 385 SAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQ 444
Query: 309 VDEALNLFAE 318
+ A L+ E
Sbjct: 445 LTRANGLYKE 454
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 174/386 (45%), Gaps = 12/386 (3%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNL 175
N VSY +I C G +L++ R + + P+ V Y + L + + DA +L
Sbjct: 215 NVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASL 274
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
EM+ K + D YN+L+ G+ +G +A E DE+ K D I T ++ +
Sbjct: 275 LREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFE 334
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
+GN KEA ++ + + T N L++ + + ++A A+ N M PN+ S
Sbjct: 335 KGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILS 394
Query: 296 YS-----IIIHGLCKNKMVDEALNLF----AEMECIKIIPDTITYSSLIDGLCKSGRISH 346
+ I+++ K EA+N F +++ + D + Y +++ C+ G ++
Sbjct: 395 VNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTE 454
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
A E ++ PAD ++ +++D K+ +D A+ + +M D ++ V + +
Sbjct: 455 AERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLR-VVADFGARVF 513
Query: 407 G-LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI 465
G L K G+L + EV + + Y++++ GLC D+A ++ EM
Sbjct: 514 GELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVG 573
Query: 466 PDAITFETIICALFEKGDNYKAEKLL 491
+ E II + G + EK+L
Sbjct: 574 VTTVLREFIIEVFEKAGRREEIEKIL 599
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSM-AQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
+P +FT N+++ +++I++ Q + PNV SY+ II+ C VDEA
Sbjct: 176 TRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEA 235
Query: 313 LNLFAE-MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
L ++ + P ++TY L GL ++GRI A L+ EM +KGQ AD YN+L+
Sbjct: 236 LEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIR 295
Query: 372 VLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV 431
DKA+ +++ + D + M+ ++G K A E ++ L+ K + +
Sbjct: 296 GYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRM 355
Query: 432 TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
T N+++ K G DEA AL +EM D P+ ++
Sbjct: 356 HPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILS 394
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 158/365 (43%), Gaps = 24/365 (6%)
Query: 113 GFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDA 172
G RLN ++ L R A+ +L RQ +P V N II ++ + K S++
Sbjct: 143 GQRLN---LHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSES 199
Query: 173 FNLFSEMVVK-KVSPDVVTYNSLLYGFCIVGQLKEATELLDE-MTRKNIGPDVITFNTLV 230
+LF + + P+VV+YN ++ C G + EA E+ + P +T+ L
Sbjct: 200 ISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLT 259
Query: 231 DALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
L + G + +A ++L M+ +G D YN+L+ GY + + +KA+ + + +
Sbjct: 260 KGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTV 319
Query: 291 PNVHSYSIIIHGLCKNKMVD-----EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
Y I++ + EA+ + + K T + L++ K G+
Sbjct: 320 -----YDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKD 374
Query: 346 HAWELVDEMHNKGQPADKFTYNS-----LLDVLCKSHHVDKAIALTKKMRDQ-GIQP--- 396
AW L +EM + P + + NS +++ K +AI KK+ + +P
Sbjct: 375 EAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVM 434
Query: 397 DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALL 456
D + Y ++ C++G L A+ F + V + ++ MI+ K D+A+ +L
Sbjct: 435 DYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKML 494
Query: 457 SEMED 461
M D
Sbjct: 495 DRMVD 499
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 156/348 (44%), Gaps = 32/348 (9%)
Query: 38 NADDAISIFNRLLGTSP-----------TPSIIEFGQIPSAFSVLGKILKKGYRPDAVTL 86
N D+A+ ++ +L +P T +++ G+I A S+L ++L KG D+
Sbjct: 231 NVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVY 290
Query: 87 TTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEG 146
LI+G G+ +A++F D++ ++ + + T ++ G + +++ R +
Sbjct: 291 NNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLD 350
Query: 147 HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI-----V 201
+ + N +++ K +A+ LF+EM+ P++++ NS G + +
Sbjct: 351 KKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKM 410
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALG---------KEGNVKEAKNVLAVMMKQ 252
G+ EA T K +G V + ++D LG ++G + EA+ A + +
Sbjct: 411 GEFSEAIN-----TFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSR 465
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
+ D ++ +++D Y I+ A+ +L+ M + + + L KN + E+
Sbjct: 466 SLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTES 525
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM--HNKG 358
+ +M + PD Y ++ GLC + A ++V EM HN G
Sbjct: 526 AEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVG 573
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 17/350 (4%)
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK-N 218
+ SL + + A L + V P V T N+++ + E+ L ++ N
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 219 IGPDVITFNTLVDALGKEGNVKEAKNVLA-VMMKQGVKPDLFTYNSLMDGYCLVNEINKA 277
I P+V+++N +++A EGNV EA V ++ P TY L G I A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG 337
++L M +G + Y+ +I G D+A+ F E++ + D I ++ ++
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEY 331
Query: 338 LCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPD 397
+ G A E + +K T N LL+V K D+A AL +M D P+
Sbjct: 332 WFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
Query: 398 VVTYN-----ILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT-------YNIMINGLCK 445
+++ N I+++ K G A F+ + G VT + Y ++ C+
Sbjct: 392 ILSVNSDTVGIMVNECFKMGEFSEAINTFKKV---GSKVTSKPFVMDYLGYCNIVTRFCE 448
Query: 446 EGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
+G+ EA +E + DA + +I A + A K+L M+
Sbjct: 449 QGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMV 498
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKM-RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
FT N+++ + ++ ++I+L + + I P+VV+YN +++ C EG + A EV++
Sbjct: 181 FTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYR 240
Query: 423 DLVIKG-YHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
++ + + TY + GL + G +A +LL EM KG D+ + +I +
Sbjct: 241 HILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDL 300
Query: 482 GDNYKAEKLLREMMAR 497
GD KA + E+ ++
Sbjct: 301 GDFDKAVEFFDELKSK 316
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 194/428 (45%), Gaps = 28/428 (6%)
Query: 10 MSSFLRLNNFPVVSKPS-----FHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQI 64
MS+ +RLN F ++ + F SH L + ++ A+ R++ +SP + + +
Sbjct: 2 MSTTVRLNRFTYLTSTAKLTRYFCSHHL---VDRSETALHEVIRIV-SSPVGGLDDLEEN 57
Query: 65 PSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD-DVVARGFRLNQVSYGT 123
+ SV P + +T +I+ + RR L+F + G L+ +
Sbjct: 58 LNQVSV---------SPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNY 108
Query: 124 LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKK 183
+++ L A LL + + ++ + ++L K DA +F +
Sbjct: 109 VLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFS 168
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
D T +++ C G +K A ++ G ++ + +L+ + NVKEA+
Sbjct: 169 CPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEAR 228
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNE-------INKAIAILNSMAQRGVTPNVHSY 296
V+ M G+ PDLF +NSL+ C N + +A+ I+ M + P SY
Sbjct: 229 RVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSY 288
Query: 297 SIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+I++ L + + V E+ + +M+ PDT +Y ++ L +GR ++VDEM
Sbjct: 289 NILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIE 348
Query: 357 KG-QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
+G +P KF Y+ L+ VLC V+ A+ L +KM+ + Y++L+ LCK G +
Sbjct: 349 RGFRPERKFYYD-LIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFE 407
Query: 416 NAQEVFQD 423
+E++++
Sbjct: 408 KGRELWEE 415
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 146/294 (49%), Gaps = 25/294 (8%)
Query: 57 SIIEFGQIPSAFSVLGKILKKGYRP-DAVTLTTLIKGLCLKGEVRRAL---QFHDDVVAR 112
++++ G+ A + KIL K P D T+T +I LC +G V+RAL H DV++
Sbjct: 147 TLVKVGKEEDAIGIF-KILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISG 205
Query: 113 GFRLNQVS-YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDK---- 167
N++S Y +L+ G + + ++++ ++ + P++ +N+++ LC+
Sbjct: 206 ----NELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRN 261
Query: 168 ---LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVI 224
LV +A N+ EM K+ P ++YN LL +++E+ ++L++M R PD
Sbjct: 262 PSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTG 321
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
++ +V L G + ++ M+++G +P+ Y L+ C V +N A+ + M
Sbjct: 322 SYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKM 381
Query: 285 AQRGVTPNVHSYSIIIHGLCK-------NKMVDEALNLFAEMEC-IKIIPDTIT 330
+ V Y ++I LCK ++ +EAL++ + C I ++ ++T
Sbjct: 382 KRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVT 435
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 134/295 (45%), Gaps = 9/295 (3%)
Query: 210 LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
LL ++ ++N D TF+ + + L K G ++A + ++ K D FT +++ C
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 270 LVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTI 329
+ +A+ +++ + Y ++ G + V EA + +M+ I PD
Sbjct: 185 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 244
Query: 330 TYSSLIDGLCK-------SGRISHAWELVDEMHN-KGQPADKFTYNSLLDVLCKSHHVDK 381
++SL+ LC+ SG + A ++ EM + K QP +YN LL L ++ V +
Sbjct: 245 CFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTS-MSYNILLSCLGRTRRVRE 303
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMIN 441
+ + ++M+ G PD +Y ++ L GR ++ +++ +G+ + Y +I
Sbjct: 304 SCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIG 363
Query: 442 GLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
LC + AL L +M+ ++ +I L + G+ K +L E ++
Sbjct: 364 VLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALS 418
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 106/227 (46%), Gaps = 7/227 (3%)
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+L+ + + + ++SI+ L K ++A+ +F ++ D T +++I LC
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
G + A ++ + + Y SLL +V +A + + M+ GI PD+
Sbjct: 185 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 244
Query: 400 TYNILMDGLCKEGRLKNAQEVFQD-----LVIKGYHV--TVRTYNIMINGLCKEGLFDEA 452
+N L+ LC+ +N + + L ++ Y + T +YNI+++ L + E+
Sbjct: 245 CFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRES 304
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+L +M+ GC PD ++ ++ L+ G K +++ EM+ RG
Sbjct: 305 CQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
+F M + D YN +++G C G+ EA + + + PDV T+N ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
+ ++ A+ + A M+++G+ PD TYNS++ G C N++ +A R V+ +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEM 354
+++ +I+G CK V + +NLF EM I+ + ITY++LI G + G + A ++ EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIAL 385
+ G + T+ +L LC + KA+A+
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAM 198
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
M + + + Y+IIIHGLCK DEA N+F + + PD TY+ +I +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
+ A +L EM +G D TYNS++ LCK + + +A ++K T+N
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNT 111
Query: 404 LMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
L++G CK R+K+ +F ++ +G V TY +I+G + G F+ AL + EM G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 464 CIPDAITFETIICALFEKGDNYKAEKLL 491
+ITF I+ L + + KA +L
Sbjct: 172 VYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
DT Y+ +I GLCK+G+ A + + G D TYN ++ + + +A L
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+M +G+ PD +TYN ++ GLCK+ +L A++V + + T+N +ING CK
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNTLINGYCKA 119
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ + L EM +G + + IT+ T+I + GD A + +EM++ G+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
++ Y +I GLC+ G+ + + + ++P+V YN +I + + A L
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKL 67
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
++EM+ + + PD +TYNS+++G C +L +A + + TFNTL++ K
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCK 118
Query: 236 EGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHS 295
VK+ N+ M ++G+ ++ TY +L+ G+ V + N A+ I M GV + +
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 296 YSIIIHGLCKNKMVDEALNLFAE 318
+ I+ LC K + +A+ + +
Sbjct: 179 FRDILPQLCSRKELRKAVAMLLQ 201
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D +I GLC G+ A +++ G + + +Y +I+ +G RA
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG--RAEKLYA 69
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
+ LV P+ + YN++I LCK ++ A +KVS T+N+L+ G+C
Sbjct: 70 EMIRRGLV-PDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKA 119
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
++K+ L EM R+ I +VIT+ TL+ + G+ A ++ M+ GV T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 262 NSLMDGYCLVNEINKAIAIL---NSMAQRGVT 290
++ C E+ KA+A+L +SM VT
Sbjct: 180 RDILPQLCSRKELRKAVAMLLQKSSMVSNNVT 211
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
K MR+ + D YNI++ GLCK G+ A +F +L+I G V+TYN+MI +
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RF 58
Query: 447 GLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
A L +EM +G +PD IT+ ++I L ++ +A K+
Sbjct: 59 SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV 102
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 40 DDAISIFNRLLGTSPTPSI------IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGL 93
D+A +IF LL + P + I F + A + +++++G PD +T ++I GL
Sbjct: 31 DEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGL 90
Query: 94 CLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNV 153
C + ++ + AR + ++ TLI G C+ + + + L ++ + NV
Sbjct: 91 CKQNKLAQ---------ARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANV 141
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+ Y T+I + + A ++F EMV V +T+ +L C +L++A +L
Sbjct: 142 ITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 178/369 (48%), Gaps = 15/369 (4%)
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS-PDVVTYNSL 194
++++ L+Q+ L+K ++ + S + ++ +V +++ + +N++
Sbjct: 36 STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTI 95
Query: 195 LYGFCIVGQLKEATELLDEM--TRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
+ GF + A + +M + ++ P +T+ ++ A G+ G ++ + + +++K+
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
G++ D F N+++ Y + +A I M + +V +++ +I G K ++D+A
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
NLF EM + ++++S+I G ++GR A ++ EM K D FT SLL+
Sbjct: 212 QNLFDEMP----QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 373 LCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
++ + + + + + + L+D CK G ++ VF+ K
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK----Q 323
Query: 433 VRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLR 492
+ +N MI GL G + A+ L SE+E G PD+++F ++ A G+ ++A++ R
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Query: 493 EMMARGLLE 501
M + ++E
Sbjct: 384 LMKEKYMIE 392
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 205/475 (43%), Gaps = 68/475 (14%)
Query: 55 TPSIIEFGQI-----PSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDV 109
+P+I+ F + PS+ S+ G T LI C +R Q H +
Sbjct: 2 SPTILSFSGVTVPAMPSSGSLSGN-----------TYLRLIDTQC--STMRELKQIHASL 48
Query: 110 VARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLV 169
+ G + V+ ++ C + + + V + N ++NTII +
Sbjct: 49 IKTGLISDTVTASRVLAFCC---ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFP 105
Query: 170 SDAFNLFSEMVVKK--VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFN 227
A ++F +M+ V P +TY S+ + +GQ ++ +L + ++ + D N
Sbjct: 106 EMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRN 165
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
T++ G + EA + M + D+ +NS++ G+ I++A + + M QR
Sbjct: 166 TMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLID-----GLCKSG 342
N S++ +I G +N +AL++F EM+ + PD T SL++ G + G
Sbjct: 222 ----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 343 RISHAW--------------ELVDEMHNKG-----------QPADKFT-YNSLLDVLCKS 376
R H + L+D G P + + +NS++ L +
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337
Query: 377 HHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHV--TVR 434
++A+ L ++ G++PD V++ ++ G + A E F+ L+ + Y + +++
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR-LMKEKYMIEPSIK 396
Query: 435 TYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEK 489
Y +M+N L GL +EA AL+ M + D + + +++ A + G+ A++
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVE---EDTVIWSSLLSACRKIGNVEMAKR 448
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 12/260 (4%)
Query: 13 FLRLNNFPVVSKPS----FHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAF 68
FL + F VV+ S F L N D + N + S + G+ A
Sbjct: 184 FLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDAL 243
Query: 69 SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
+ ++ +K +PD T+ +L+ G + H+ +V F LN + LI
Sbjct: 244 DMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMY 303
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV 188
C+ G L + K + +N++I L + A +LFSE+ + PD
Sbjct: 304 CKCGCIEEGLNVFECAP----KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRKN-IGPDVITFNTLVDALGKEGNVKEAKNVLA 247
V++ +L G++ A E M K I P + + +V+ LG G ++EA+ A
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAE---A 416
Query: 248 VMMKQGVKPDLFTYNSLMDG 267
++ V+ D ++SL+
Sbjct: 417 LIKNMPVEEDTVIWSSLLSA 436
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 138/282 (48%), Gaps = 24/282 (8%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL 281
+V T N V+ L KE V+EAK V + +K+ +KPD TY +++ G+C V ++ +A +
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVF-IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 282 NSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP-DTITYSSLIDGLCK 340
N M G ++ + I+ L K DEA +F M + D Y +ID LCK
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCK 298
Query: 341 SGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQ-PDVV 399
+GRI A ++ DEM +G D T+ SL+ L V +A L +G++ PD+
Sbjct: 299 NGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLV-----EGVENPDIS 353
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING-LCKEGLFDEALALLSE 458
Y+ L+ GL K R A EVF+ ++ +G + TY +++ G L + G
Sbjct: 354 IYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRG----------- 402
Query: 459 MEDKGCIPDAITFETI-ICALFEKGDNYKAEKLLREMMARGL 499
KG P + F+TI + + + G + K + + RGL
Sbjct: 403 --RKGPDP-LVNFDTIFVGGMIKAGKRLETTKYIERTLKRGL 441
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 176/389 (45%), Gaps = 27/389 (6%)
Query: 79 YRPDAV-TLTTLIKGLCLKGEVRRALQFHD---DVVARGFRLNQVSYGTLIKGLCRMGQT 134
+ PD T TT K L + G R F + ++ RG +N ++ ++K L +
Sbjct: 104 HHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGL-VNDKTFRIVLKTLASAREL 162
Query: 135 RASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSL 194
+ + + G NV N +++LCK+KLV +A +F ++ + + PD +TY ++
Sbjct: 163 KKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTM 221
Query: 195 LYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM-KQG 253
+ GFC VG L EA +L + M + D+ +++ L K+ EA V VM+ K+G
Sbjct: 222 IQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRG 281
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
D Y ++D C I+ A + + M +RGV + +++ +I+GL + V EA
Sbjct: 282 GDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAY 341
Query: 314 NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
L +E PD Y LI GL K R S A E+ +M +G TY LL
Sbjct: 342 GLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLL--- 394
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
+ H L ++ R +G P V I + G+ K G+ + + + +G V
Sbjct: 395 -QGH-------LGRRGR-KGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPR 445
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDK 462
Y+ ++ E E + + EM K
Sbjct: 446 FDYSKFLHYYSNE----EGVVMFEEMAKK 470
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 17/232 (7%)
Query: 75 LKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQ- 133
LK+ +PD +T T+I+G C G++ A + + ++ GF ++ + +++ L + Q
Sbjct: 207 LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF 266
Query: 134 TRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
AS V + Y +ID LCK+ + A +F EM + V D +T+ S
Sbjct: 267 DEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWAS 326
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
L+YG + ++ EA L++ + PD+ ++ L+ L K EA V M+++G
Sbjct: 327 LIYGLLVKRRVVEAYGLVEGVE----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRG 382
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
+P + TY L+ G+ L ++G P V+ +I + G+ K
Sbjct: 383 CEPIMHTYLMLLQGH------------LGRRGRKGPDPLVNFDTIFVGGMIK 422
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
+F + F V+ + K+G D +I LC G + A + D++ RG ++ +
Sbjct: 265 QFDEASKVFYVM--VSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNL 322
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++ +LI GL + + L+ VE P++ +Y+ +I L K K S+A +F +M
Sbjct: 323 TWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKM 378
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD-VITFNTL-VDALGKEG 237
+ + P + TY LL G L RK GPD ++ F+T+ V + K G
Sbjct: 379 IQRGCEPIMHTYLMLLQGH------------LGRRGRK--GPDPLVNFDTIFVGGMIKAG 424
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
E + +K+G++ F Y+ + Y NE + + + MA++
Sbjct: 425 KRLETTKYIERTLKRGLEVPRFDYSKFLHYYS--NE--EGVVMFEEMAKK 470
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 147/295 (49%), Gaps = 8/295 (2%)
Query: 191 YNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMM 250
+NS++ + G+ E E+ + M + D T + L + ++ A++ ++M+
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 251 KQGVKPDLFTYNSL---MDGYCLVNEINKAIAILNSMAQ-RGVTPNVHSYSIIIHGLCKN 306
+ G+ D+ T SL + C EI +A ++ M +GV N+ ++ +I G C
Sbjct: 202 ESGI--DVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVK 258
Query: 307 KMVDEALNLFAE-MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+ E L+L + ME ++ D +Y LIDG G++ A LV MH+K + +
Sbjct: 259 RWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYL 318
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
YN +++ + V+K I L +M +G+ P+ TY +LM+GLCK G++ A +L
Sbjct: 319 YNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELR 378
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFE 480
+ + + Y+ + + G+ D++L +++EM G IP A E + +LFE
Sbjct: 379 VNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFE 433
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 38/237 (16%)
Query: 144 VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM-VVKKVSPDVVTYNSLLYGFCI-V 201
VE + V ++ LC + ++ A L EM +VK V ++VT+ S++ G C+
Sbjct: 201 VESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKR 259
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
+E +L M ++++ D+ ++ L+D G V+EA+ ++ +M + ++ + + Y
Sbjct: 260 WDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLY 319
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNK-------------- 307
N +M+GY + K I + + M+ RGVTPN +Y ++++GLCK
Sbjct: 320 NLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRV 379
Query: 308 ---------------------MVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
M+D++L + AEM IP L D L + R
Sbjct: 380 NEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR 436
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 12/278 (4%)
Query: 105 FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLC 164
F RG++ N +Y T+IK + L+ +V + +V +YN II C
Sbjct: 95 FRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCC 154
Query: 165 KDK-LVSDAFNLFSEMVVKKVS-PDVVTYNSLLY---------GFCIVGQLKEATELLDE 213
K L + AF+++++M+ S PD+ TY LL C V L L +
Sbjct: 155 GRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYV-YLHAVRSLTKQ 213
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
M + PD N ++ A K V EA V M G +P+ +TY+ L+ G C
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+ + + M +G+ PN Y ++I L + +DEA+ + +M + PD +TY++
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLD 371
++ LC+ GR S A E+V+E + + Y +L+D
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 255 KPDLFTY-----------NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
KPDL TY N L Y ++ + ++ M GV P+ ++II
Sbjct: 177 KPDLETYTLLLSSLLKRFNKLNVCYVYLHAVR---SLTKQMKSNGVIPDTFVLNMIIKAY 233
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
K VDEA+ +F EM P+ TYS L+ G+C+ GR+ EM KG +
Sbjct: 234 AKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNG 293
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
Y L+ L +D+A+ + M + PD++TYN ++ LC+ GR A E+ ++
Sbjct: 294 SCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Query: 424 LVIKGYHVTVRTYNIMIN 441
+ + R Y +++
Sbjct: 354 WKKRDPVMGERNYRTLMD 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%)
Query: 350 LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
L +M + G D F N ++ K VD+AI + K+M G +P+ TY+ L+ G+C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 410 KEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAI 469
++GR+ ++++ +KG Y ++I L E DEA+ ++ +M PD +
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDML 329
Query: 470 TFETIICALFEKGDNYKAEKLLREMMAR 497
T+ T++ L G +A +++ E R
Sbjct: 330 TYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 274 INKAIAILNSMAQRGVT-PNVHSYSIIIHGLCK--NKM------VDEALNLFAEMECIKI 324
N+A + N M + + P++ +Y++++ L K NK+ + +L +M+ +
Sbjct: 160 FNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGV 219
Query: 325 IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIA 384
IPDT + +I K + A + EM G + +TY+ L+ +C+ V + +
Sbjct: 220 IPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLG 279
Query: 385 LTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLC 444
K+M+ +G+ P+ Y +L+ L E RL A EV D++ + TYN ++ LC
Sbjct: 280 FYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELC 339
Query: 445 KEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ G EAL ++ E + + + + T++
Sbjct: 340 RGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 83/165 (50%)
Query: 69 SVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGL 128
S+ ++ G PD L +IK EV A++ ++ G N +Y L+KG+
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV 188
C G+ L ++++ + PN Y +I SL ++ + +A + +M+ +SPD+
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
+TYN++L C G+ EA E+++E +++ + TL+D +
Sbjct: 329 LTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEV 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 63/116 (54%)
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
+LTK+M+ G+ PD N+++ K + A VF+++ + G TY+ ++ G+
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 444 CKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
C++G + L EM+ KG +P+ + +IC+L + +A +++ +M+A L
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSL 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 107 DDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKD 166
+ V+ F LN + IK + + ++++ +++ + +PN Y+ ++ +C+
Sbjct: 217 NGVIPDTFVLNMI-----IKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 167 KLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITF 226
V + EM VK + P+ Y L+ + +L EA E++ +M ++ PD++T+
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
Query: 227 NTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
NT++ L + G EA ++ K+ Y +LMD +N+
Sbjct: 332 NTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVYFLNK 378
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ A V ++ G P+A T + L+KG+C KG V + L F+ ++ +G N Y
Sbjct: 238 EVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYM 297
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK 182
LI L + +++++ + + + P+++ YNT++ LC+ S+A + E K
Sbjct: 298 VLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW--K 355
Query: 183 KVSP 186
K P
Sbjct: 356 KRDP 359
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
EL EM +G + TY +L+ L ++ D A + K+M G+ PD++TYNIL+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 409 CKEGRLKNA---------QEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
CK G+L+ A ++F L +KG V TY MI+G CK+G +EA L +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
++ G +PD+ T+ T+I A GD + +L++EM
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 9/174 (5%)
Query: 209 ELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY 268
EL EM+++ + + +T+ TL+ L + G+ A+ + M+ GV PD+ TYN L+DG
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 269 CLVNEINKAIA---------ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
C ++ KA+ + S++ +GV PNV +Y+ +I G CK +EA LF +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 320 ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVL 373
+ +PD+ TY++LI + G + + EL+ EM + D TY + D+L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 11/190 (5%)
Query: 278 IAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDG 337
+ + M+QRG+ N +Y+ +I GL + D A +F EM + PD +TY+ L+DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 338 LCKSGRISHA---------WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKK 388
LCK+G++ A W+L + KG + TY +++ CK ++A L +K
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 389 MRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGL 448
M++ G PD TYN L+ ++G + E+ +++ + TY ++ + + +G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGR 179
Query: 449 FDEA-LALLS 457
D+ L +LS
Sbjct: 180 LDKGFLEMLS 189
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
+ LF EM ++ +T+TY++LI GL ++G A E+ EM + G P D TYN LLD
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 373 LCKSHHVDKAIALTK---------KMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
LCK+ ++KA+ K + +G++P+VVTY ++ G CK+G + A +F+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
+ G TYN +I ++G + L+ EM DA T+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
M ++G+ + TY +L+ G + + A I M GV P++ +Y+I++ GLCKN
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 309 VDEAL---------NLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
+++AL +LF + + P+ +TY+++I G CK G A+ L +M G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
D TYN+L+ + + L K+MR D TY ++ D + +GRL
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 103 LQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDS 162
++ ++ RG N V+Y TLI+GL + G + ++ +++ V P+++ YN ++D
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 163 LCKD-KL--------VSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
LCK+ KL V D ++LF + +K V P+VVTY +++ GFC G +EA L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMD 266
M PD T+NTL+ A ++G+ + ++ M D TY + D
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 76 KKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTR 135
++G + VT TTLI+GL G+ A + ++V+ G + ++Y L+ GLC+ G+
Sbjct: 9 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLE 68
Query: 136 ASLQLLRQVEG---------HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP 186
+L + +G VKPNVV Y T+I CK +A+ LF +M P
Sbjct: 69 KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP 128
Query: 187 DVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
D TYN+L+ G + EL+ EM D T+ + D L
Sbjct: 129 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
++L R++ + N V Y T+I L + A +F EMV V PD++TYN LL G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 198 FC---------IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAV 248
C + G++++ +L ++ K + P+V+T+ T++ K+G +EA +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
M + G PD TYN+L+ + + + ++ M + +Y ++
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 383 IALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMING 442
+ L ++M +G+ + VTY L+ GL + G AQE+F+++V G + TYNI+++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 443 LCKEGLFDEALA---------LLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLRE 493
LCK G ++AL L + KG P+ +T+ T+I +KG +A L R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 494 MMARGLL 500
M G L
Sbjct: 121 MKEDGPL 127
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 45 IFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRAL- 103
+ N + T+ + + G A + +++ G PD +T L+ GLC G++ +AL
Sbjct: 13 VGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALV 72
Query: 104 --QFHD------DVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVM 155
+ D + +G + N V+Y T+I G C+ G + L R+++ P+
Sbjct: 73 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGT 132
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
YNT+I + +D + + L EM + + D TY
Sbjct: 133 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 89/142 (62%)
Query: 249 MMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM 308
M++ + P TYNS++DG+C + ++ A +L+SMA +G +P+V ++S +I+G CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 309 VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNS 368
VD + +F EM I+ +T+TY++LI G C+ G + A +L++EM + G D T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 369 LLDVLCKSHHVDKAIALTKKMR 390
+L LC + KA A+ + ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%)
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
M R +I P IT+N+++D K+ V +AK +L M +G PD+ T+++L++GYC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
++ + I M +RG+ N +Y+ +IHG C+ +D A +L EM + PD IT+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 334 LIDGLCKSGRISHAWELVDEMH 355
++ GLC + A+ +++++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 77/136 (56%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
P + YN++ID CK V DA + M K SPDVVT+++L+ G+C ++ E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
EM R+ I + +T+ TL+ + G++ A+++L M+ GV PD T++ ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 271 VNEINKAIAILNSMAQ 286
E+ KA AIL + +
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%)
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
I P TITY+S+IDG CK R+ A ++D M +KG D T+++L++ CK+ VD +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
+ +M +GI + VTY L+ G C+ G L AQ++ +++ G T++ M+ GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 444 CKEGLFDEALALLSEME 460
C + +A A+L +++
Sbjct: 126 CSKKELRKAFAILEDLQ 142
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 79/142 (55%)
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M+ + P +TYNS++ GFC ++ +A +LD M K PDV+TF+TL++ K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
V + M ++G+ + TY +L+ G+C V +++ A +LN M GV P+ ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 299 IIHGLCKNKMVDEALNLFAEME 320
++ GLC K + +A + +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 78/141 (55%)
Query: 284 MAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGR 343
M + + P +Y+ +I G CK VD+A + M PD +T+S+LI+G CK+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 344 ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNI 403
+ + E+ EMH +G A+ TY +L+ C+ +D A L +M G+ PD +T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 404 LMDGLCKEGRLKNAQEVFQDL 424
++ GLC + L+ A + +DL
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%)
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
TYNS++D CK VD A + M +G PDVVT++ L++G CK R+ N E+F ++
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDN 484
+G TY +I+G C+ G D A LL+EM G PD ITF ++ L K +
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 485 YKAEKLLREM 494
KA +L ++
Sbjct: 132 RKAFAILEDL 141
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%)
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
++Y ++I G C+ + + ++L + P+VV ++T+I+ CK K V + +F E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M + + + VTY +L++GFC VG L A +LL+EM + PD ITF+ ++ L +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 239 VKEAKNVLAVMMK 251
+++A +L + K
Sbjct: 131 LRKAFAILEDLQK 143
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%)
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
I P +TYN ++DG CK+ R+ +A+ + + KG V T++ +ING CK D +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 454 ALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ EM +G + + +T+ T+I + GD A+ LL EM++ G+
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 76/143 (53%)
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQ 133
+L+ P +T ++I G C + V A + D + ++G + V++ TLI G C+ +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 134 TRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNS 193
+++ ++ + N V Y T+I C+ + A +L +EM+ V+PD +T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 194 LLYGFCIVGQLKEATELLDEMTR 216
+L G C +L++A +L+++ +
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ A +L + KG PD VT +TLI G C V ++ ++ RG N V+Y
Sbjct: 25 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 84
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
TLI G C++G A+ LL ++ V P+ + ++ ++ LC K + AF + ++
Sbjct: 85 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 181/417 (43%), Gaps = 40/417 (9%)
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
++ +I+ LCL +V+ A +VA G LN Y + G L + +V
Sbjct: 258 SIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV 317
Query: 145 EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQL 204
+ +P+V + N I+ SLC+ A+ E+ D VT+ L+ C G +
Sbjct: 318 K---YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDI 374
Query: 205 KEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
K A L E+ K PDV ++N ++ L ++G + +L M + G+ L T+ +
Sbjct: 375 KRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIM 434
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVT-------PNVHSYSII-------------IHGLC 304
+ GYC + +A I+N M G+ P ++S++
Sbjct: 435 VTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFS 494
Query: 305 KNKMVDE---ALNLFAEMECIK----------IIPDTITYSSLIDGLCKSGRISHAWELV 351
K + D+ L L +++ + ++P+ ++SLI + G + A L+
Sbjct: 495 KAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLL 551
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSH-HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCK 410
DEM GQ + ++ L+ LC S H+ +I+L +K Q D T N L+ CK
Sbjct: 552 DEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCK 611
Query: 411 EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
+G ++++ +F +V + + TY +I CK+ ++ L + ++ +PD
Sbjct: 612 KGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPD 668
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 197/435 (45%), Gaps = 13/435 (2%)
Query: 66 SAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLI 125
+AF++L ++L K + P + LI LC + A + + + + V Y LI
Sbjct: 757 AAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDS-----SYVHYA-LI 810
Query: 126 KGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
KGL G+ + LR + + + +YN + CK + MV K +
Sbjct: 811 KGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNII 870
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD-VITFNTLVDALGKEGNVKEAKN 244
V +Y + C+ Q A L + + P VI +N L+ + + N E
Sbjct: 871 CSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNK 930
Query: 245 VLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC 304
VL M +GV PD T+N L+ GY + + ++ L++M +G+ PN S + LC
Sbjct: 931 VLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLC 990
Query: 305 KNKMVDEALNLFAEMECIKI-IPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
N V +AL+L+ ME + ++ + +++ L G I A + + + G A
Sbjct: 991 DNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP- 1049
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKM-RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
Y++++ L ++D A+ L M ++Q I P +Y+ +++GL + +L A +
Sbjct: 1050 -NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSI-PGSSSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
++V G ++ T++ +++ C+ E+ L+ M G P F+T+I +
Sbjct: 1108 EMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEK 1167
Query: 483 DNYKAEKLLREMMAR 497
+ KA +++ EMM +
Sbjct: 1168 NTVKASEMM-EMMQK 1181
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 185/457 (40%), Gaps = 72/457 (15%)
Query: 79 YRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASL 138
Y PD ++ LC + RA + +++ GF+ ++V++G LI C G + ++
Sbjct: 319 YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAV 378
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
L ++ KP+V YN I+ L + L + EM + + T+ ++ G+
Sbjct: 379 LYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGY 438
Query: 199 CIVGQLKEATELLDEMTRKN-----------------IGPDVIT---------------- 225
C Q +EA ++++M +G D +
Sbjct: 439 CKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEF 498
Query: 226 FNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMA 285
F+ L + L ++ + + +++ + V P+ +NSL+ ++ A+ +L+ MA
Sbjct: 499 FDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMA 555
Query: 286 QRGVTPNVHSYSIIIHGLCKNKM-VDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRI 344
+ G + S+++++ LC ++ + +++L + + D T + L+ CK G
Sbjct: 556 RWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFS 615
Query: 345 SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNIL 404
H+ + +M P D TY SL+ CK ++ + + ++ PD+ L
Sbjct: 616 RHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDL 675
Query: 405 MDGLCKEGRLKNAQEVFQDLVI-----------------------------------KGY 429
+ L ++G ++ ++F+ + I +G
Sbjct: 676 WNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGC 735
Query: 430 HVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
V YN +I GLC E A A+L EM DK IP
Sbjct: 736 IVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIP 772
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 145/306 (47%), Gaps = 11/306 (3%)
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGK---EGNVKEAKNVLAVMMKQGVKPDL 258
G +KE LL EM R G ++ D +GK + + ++A + M ++G+ P
Sbjct: 161 GMVKEVELLLMEMERH--GDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLT 218
Query: 259 FTYNSLMDGYCLVNEINKAIAI-LNSMAQRGVTP--NVHSYSIIIHGLCKNKMVDEALNL 315
Y L+D V+ A I L+ + R N+ S +I LC ++ V EA L
Sbjct: 219 SCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVL 278
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
++ + I ++ YS + G + + E+ K +P D F N +L LC+
Sbjct: 279 ARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV--KYEP-DVFVGNRILHSLCR 335
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
++A +++ G + D VT+ IL+ C EG +K A +++ KGY V +
Sbjct: 336 RFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYS 395
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMM 495
YN +++GL ++GL+ +L EM++ G + TF+ ++ + +A++++ +M
Sbjct: 396 YNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMF 455
Query: 496 ARGLLE 501
GL+E
Sbjct: 456 GYGLIE 461
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 182/440 (41%), Gaps = 43/440 (9%)
Query: 97 GEVRRALQFHDDVVARGFRLNQVSYGTLIKGLC-RMGQTRASLQLLRQVEGHLVKPNVVM 155
G+++ AL+ D++ G +L++ S+ L++ LC R S+ LL + + +
Sbjct: 542 GDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGET 601
Query: 156 YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMT 215
N ++ CK + +F +MV D VTY SL+ FC L + +
Sbjct: 602 LNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQ 661
Query: 216 RKNIGPDVITFNTLVDALGKEGNVKE---------------------------------- 241
N PD+ L + L ++G V+E
Sbjct: 662 NDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSC 721
Query: 242 -AKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
A +V+ + +G + YN L+ G C + + A AIL+ M + P++ S ++I
Sbjct: 722 IAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLI 781
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
LC+ A NL + I + + +LI GL +G++ A + M + G
Sbjct: 782 PRLCRANKAGTAFNLAEQ------IDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLS 835
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ YN + CK ++ K + M + I V +Y + +C E + +A +
Sbjct: 836 SYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISL 895
Query: 421 FQDLVI-KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALF 479
+ L++ + V YN++I + + E +L EM+ +G +PD TF ++
Sbjct: 896 KEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYS 955
Query: 480 EKGDNYKAEKLLREMMARGL 499
D + + L M+++G+
Sbjct: 956 SSADYSSSLRYLSAMISKGM 975
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 166/370 (44%), Gaps = 8/370 (2%)
Query: 70 VLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVV-ARGFRLNQVSYGTLIKGL 128
VLG +++K + ++ +CL+ + A+ + ++ + Y LI +
Sbjct: 860 VLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYM 919
Query: 129 CRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDV 188
R ++L +++G V P+ +N ++ S + S M+ K + P+
Sbjct: 920 FRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNN 979
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRK--NIGPDVITFNTLVDALGKEGNVKEAKNVL 246
+ ++ C G +K+A +L M K N+G V+ +V+ L +G + +A++ L
Sbjct: 980 RSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQ-TKIVETLISKGEIPKAEDFL 1038
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
+ + G+ Y++++ ++ A+ +LN+M + P SY +I+GL +
Sbjct: 1039 TRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRY 1096
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
+D+A++ EM + + P T+S L+ C++ ++ + L+ M G+ + +
Sbjct: 1097 NQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMF 1156
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL--CKEGRLKNAQEVFQDL 424
+++D + KA + + M+ G + D T+ L+ + KE + A E F
Sbjct: 1157 KTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSSSKEKKTTTAGEGFLSR 1216
Query: 425 VIKGYHVTVR 434
++ G T +
Sbjct: 1217 LLSGNGFTWK 1226
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 163/395 (41%), Gaps = 43/395 (10%)
Query: 88 TLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
LIKGL L G++ A +++ G Y + +G C+ G ++ +V G
Sbjct: 808 ALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCK-GNNWMKVE---EVLGL 863
Query: 148 LVKPNVVM----YNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD-VVTYNSLLYGFCIVG 202
+V+ N++ Y + +C + A +L +++ + +P V+ YN L++
Sbjct: 864 MVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAK 923
Query: 203 QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYN 262
E ++L EM + + PD TFN LV + + L+ M+ +G+KP+ +
Sbjct: 924 NHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLR 983
Query: 263 SLMDGYCLVNEINKAIAILNSMAQRG-------------------------------VTP 291
++ C ++ KA+ + M +G VT
Sbjct: 984 AVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTR 1043
Query: 292 N---VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAW 348
N +Y II L +D A++L M + IP + +Y S+I+GL + ++ A
Sbjct: 1044 NGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAM 1103
Query: 349 ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGL 408
+ EM G T++ L+ C++ V ++ L K M G P + ++D
Sbjct: 1104 DFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRF 1163
Query: 409 CKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
E A E+ + + GY V T+ +I+ +
Sbjct: 1164 RVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNM 1198
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Query: 55 TPSIIEFGQIPSAFSVLGKILKKGYR-PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARG 113
T S+ + G + A + + KG+ +V T +++ L KGE+ +A F V G
Sbjct: 986 TSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNG 1045
Query: 114 FRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAF 173
+ +Y +IK L G ++ LL + + P Y+++I+ L + + A
Sbjct: 1046 --MMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAM 1103
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
+ +EMV +SP + T++ L++ FC Q+ E+ L+ M P F T++D
Sbjct: 1104 DFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRF 1163
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
E N +A ++ +M K G + D T+ SL+
Sbjct: 1164 RVEKNTVKASEMMEMMQKCGYEVDFETHWSLI 1195
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 191/423 (45%), Gaps = 67/423 (15%)
Query: 28 HSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLT 87
++H L I D +SI N +L S E S+ ++ K+G PD T T
Sbjct: 64 YAHKLFDEIPKPD--VSICNHVLRGSAQSMKPE-----KTVSLYTEMEKRGVSPDRYTFT 116
Query: 88 TLIKGLCLKGEVR-RALQFHDDVVARGFRLNQ---------------------------- 118
++K C K E R FH VV GF LN+
Sbjct: 117 FVLKA-CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK 175
Query: 119 ---VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
V++ ++ G + G+ +++L + + + V +N +I K K + A L
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDE----MPYKDQVAWNVMITGCLKCKEMDSAREL 231
Query: 176 FSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGK 235
F K DVVT+N+++ G+ G KEA + EM PDV+T +L+ A
Sbjct: 232 FDRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 236 EGNVKEAKNV-LAVMMKQGVKPDLFT----YNSLMDGYCLVNEINKAIAILNSMAQRGVT 290
G+++ K + + ++ V ++ +N+L+D Y I++AI + + R
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR--- 344
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA--- 347
++ +++ +I GL + + ++ +F EM+ +K+ P+ +T+ +I SGR+
Sbjct: 345 -DLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKY 402
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+ L+ +M+N +P K Y ++D+L ++ +++A + M+ I+P+ + + L+ G
Sbjct: 403 FSLMRDMYNI-EPNIKH-YGCMVDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTLL-G 456
Query: 408 LCK 410
CK
Sbjct: 457 ACK 459
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 153/360 (42%), Gaps = 31/360 (8%)
Query: 130 RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVS------DAFNLFSEMVVKK 183
++ Q +++ L+Q+ +V ++ +++ L +S A LF E+
Sbjct: 17 KLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIP--- 73
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
PDV N +L G + ++ L EM ++ + PD TF ++ A K
Sbjct: 74 -KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+++ G + + N+L+ + ++ A + + A+ + ++S + G
Sbjct: 133 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK----AHKVAWSSMTSGY 188
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
K +DEA+ LF EM D + ++ +I G K + A EL D K D
Sbjct: 189 AKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELFDRFTEK----DV 240
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
T+N+++ + +A+ + K+MRD G PDVVT L+ G L+ + +
Sbjct: 241 VTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIY 300
Query: 424 L-----VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICAL 478
+ V +V +N +I+ K G D A+ + ++D+ D T+ T+I L
Sbjct: 301 ILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR----DLSTWNTLIVGL 356
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 131/319 (41%), Gaps = 53/319 (16%)
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYG--FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
+ + MVV + ++ L+Y + G LK A +L DE+ + PDV N ++
Sbjct: 30 QIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPK----PDVSICNHVLR 85
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ ++ ++ M K+GV PD +T+ ++ C E N A G
Sbjct: 86 GSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA-CSKLEWRS-----NGFAFHG--- 136
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
++ HG N+ V AL LF G + A EL
Sbjct: 137 -----KVVRHGFVLNEYVKNALILFH---------------------ANCGDLGIASELF 170
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
D+ A K ++S+ K +D+A+ L +M + D V +N+++ G K
Sbjct: 171 DD----SAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKC 222
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITF 471
+ +A+E+F K V T+N MI+G G EAL + EM D G PD +T
Sbjct: 223 KEMDSARELFDRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTI 278
Query: 472 ETIICALFEKGDNYKAEKL 490
+++ A GD ++L
Sbjct: 279 LSLLSACAVLGDLETGKRL 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 21/244 (8%)
Query: 40 DDAISIFNR------LLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGL 93
D A +F+R + + + G A + ++ G PD VT+ +L+
Sbjct: 226 DSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 94 CLKGEVRRALQFHDDVVARGFRLNQVSYGT-----LIKGLCRMGQTRASLQLLRQVEGHL 148
+ G++ + H ++ + + GT LI + G ++++ R V+
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR- 344
Query: 149 VKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEAT 208
++ +NT+I L + +F EM KV P+ VT+ ++ G++ E
Sbjct: 345 ---DLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 400
Query: 209 ELLDEMTR-KNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
+ M NI P++ + +VD LG+ G ++EA + M ++P+ + +L+ G
Sbjct: 401 KYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTLL-G 456
Query: 268 YCLV 271
C +
Sbjct: 457 ACKI 460
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 173/338 (51%), Gaps = 42/338 (12%)
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
LLR+ + P N I L + + +A LF K +S ++NS++ G+
Sbjct: 6 LLRRTYSTTIPPPTA--NVRITHLSRIGKIHEARKLFDSCDSKSIS----SWNSMVAGYF 59
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
++A +L DEM +NI I++N LV K G + EA+ V +M ++ V
Sbjct: 60 ANLMPRDARKLFDEMPDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPERNV----V 111
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
++ +L+ GY +++ A ++ M ++ N S+++++ G ++ +D+A L+
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLY--- 164
Query: 320 ECIKIIPD--TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH 377
++IPD I +S+I GLCK GR+ A E+ DEM + T+ +++ +++
Sbjct: 165 ---EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNN 217
Query: 378 HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYN 437
VD A +K+ D + V++ ++ G + GR+++A+E+F+ + +K V N
Sbjct: 218 RVDDA----RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACN 269
Query: 438 IMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
MI+GL ++G +A + M+++ DA +++T+I
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERN---DA-SWQTVI 303
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 181/414 (43%), Gaps = 72/414 (17%)
Query: 100 RRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTI 159
R A + D++ R N +S+ L+ G + G+ + R+V + + NVV + +
Sbjct: 65 RDARKLFDEMPDR----NIISWNGLVSGYMKNGE----IDEARKVFDLMPERNVVSWTAL 116
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
+ + V A +LF +M K + V++ +L GF G++ +A +L + + K
Sbjct: 117 VKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK-- 170
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
D I +++ L KEG V EA+ + M ++ V T+ +++ GY N ++ A
Sbjct: 171 --DNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARK 224
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
I + M ++ S++ ++ G +N +++A LF E + + P I +++I GL
Sbjct: 225 IFDVMPEKTEV----SWTSMLMGYVQNGRIEDAEELF---EVMPVKP-VIACNAMISGLG 276
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP--- 396
+ G I+ A + D M + ++ +++ + ++ +A+ L M+ QG++P
Sbjct: 277 QKGEIAKARRVFDSMKERNDA----SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFP 332
Query: 397 --------------------------------DVVTYNILMDGLCKEGRLKNAQEVFQDL 424
DV ++LM K G L ++ +F
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI-PDAITFETIICA 477
K + +N +I+G GL +EAL + EM G P+ +TF + A
Sbjct: 393 PSK----DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 186/451 (41%), Gaps = 80/451 (17%)
Query: 36 IHNA--DDAISIF------NRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLT 87
+HN D A S+F N++ T ++ G+I A + I K D + T
Sbjct: 121 VHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIART 176
Query: 88 TLIKGLCLKGEVRRALQFHDDVVAR----------GFRLN-----------------QVS 120
++I GLC +G V A + D++ R G+ N +VS
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS 236
Query: 121 YGTLIKGLCRMGQTRASLQLL---------------------------RQVEGHLVKPNV 153
+ +++ G + G+ + +L R+V + + N
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
+ T+I ++ +A +LF M + V P T S+L + L ++ +
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 214 MTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNE 273
+ R DV + L+ K G + ++K ++ + D+ +NS++ GY
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSK----LIFDRFPSKDIIMWNSIISGYASHGL 412
Query: 274 INKAIAILNSMAQRGVT-PNVHSYSIIIHGLCKNKMVDEALNLFAEMECI-KIIPDTITY 331
+A+ + M G T PN ++ + MV+E L ++ ME + + P T Y
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 332 SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH-HVDKAIALTKKMR 390
+ ++D L ++GR + A E++D M +P D + SLL C++H +D A KK+
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSM--TVEP-DAAVWGSLLGA-CRTHSQLDVAEFCAKKLI 528
Query: 391 DQGIQPD-VVTYNILMDGLCKEGRLKNAQEV 420
+ I+P+ TY +L + +GR + E+
Sbjct: 529 E--IEPENSGTYILLSNMYASQGRWADVAEL 557
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 1/257 (0%)
Query: 137 SLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV-VKKVSPDVVTYNSLL 195
S+Q R +E + + V N ++ + K +A ++ EM + + PD+ TYN ++
Sbjct: 130 SIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMI 189
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
C G + ++ EM RK I P +F ++D KE E + V+ +M + GV
Sbjct: 190 RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVH 249
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
+ TYN ++ C + +A A+++ + + PN +YS++IHG C + +DEA+NL
Sbjct: 250 VGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL 309
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
F M C PD+ Y +LI LCK G A L E K L++ L
Sbjct: 310 FEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLAS 369
Query: 376 SHHVDKAIALTKKMRDQ 392
VD+A L ++++
Sbjct: 370 RSKVDEAKELIAVVKEK 386
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 117/234 (50%), Gaps = 1/234 (0%)
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTR-KNIGPDVITFNTLVDALGKEGNVKEAKNVL 246
V + N+LL+ + KEA + EM + I PD+ T+N ++ L + G+ + +++
Sbjct: 146 VKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIV 205
Query: 247 AVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKN 306
A M ++ +KP ++ ++DG+ + ++ ++ M + GV V +Y+I+I LCK
Sbjct: 206 AEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKR 265
Query: 307 KMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTY 366
K EA L + ++ P+++TYS LI G C + A L + M G D Y
Sbjct: 266 KKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECY 325
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+L+ LCK + A+ L ++ ++ P L++GL ++ A+E+
Sbjct: 326 FTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ- 252
+LYG L + + + + I V + N L+ A + KEA V M K
Sbjct: 119 ILYG--RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMY 176
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
G++PDL TYN ++ C + + +I+ M ++ + P S+ ++I G K + DE
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 313 LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDV 372
+ M+ + TY+ +I LCK + + A L+D + + + TY+ L+
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 373 LCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVT 432
C ++D+A+ L + M G +PD Y L+ LCK G + A + ++ + K + +
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 433 VRTYNIMINGLCKEGLFDEALALLSEMEDK 462
++NGL DEA L++ +++K
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%)
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
G+ P++ +Y+ +I LC++ + ++ AEME I P ++ +IDG K +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+++ M G TYN ++ LCK +A AL + ++P+ VTY++L+ G
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPD 467
C E L A +F+ +V GY Y +I+ LCK G F+ AL L E +K +P
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 468 AITFETIICALFEKGDNYKAEKLL 491
+ ++ L + +A++L+
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELI 380
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 4/282 (1%)
Query: 222 DVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKP--DLFTYNSLMDGYCLVNEINKAIA 279
D I F+ V L +E + +L ++ P + F +++ Y N ++++I
Sbjct: 74 DRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAII-LYGRANMLDRSIQ 132
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTITYSSLIDGL 338
++ Q + V S + ++ K EA ++ EM + I PD TY+ +I L
Sbjct: 133 TFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVL 192
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
C+SG S ++ +V EM K ++ ++D K D+ + + M + G+ V
Sbjct: 193 CESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGV 252
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
TYNI++ LCK + A+ + ++ TY+++I+G C E DEA+ L
Sbjct: 253 ATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEV 312
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
M G PD+ + T+I L + GD A L RE M + +
Sbjct: 313 MVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWV 354
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%)
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
+Y +I+ LC G T +S ++ ++E +KP + +ID K++ + + M
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 180 VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNV 239
V V TYN ++ C + EA L+D + + P+ +T++ L+ E N+
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSII 299
EA N+ VM+ G KPD Y +L+ C + A+ + ++ P+ +
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWL 363
Query: 300 IHGLCKNKMVDEALNLFA 317
++GL VDEA L A
Sbjct: 364 VNGLASRSKVDEAKELIA 381
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 78 GYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRAS 137
G PD T +I+ LC G + ++ + + S+G +I G + +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 138 LQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYG 197
+++R ++ V V YN +I LCK K ++A L ++ ++ P+ VTY+ L++G
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPD 257
FC L EA L + M PD + TL+ L K G+ + A + M++ P
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 258 LFTYNSLMDGYC---LVNEINKAIAILNSMAQRGV 289
L++G V+E + IA++ R V
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNV 391
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 187/435 (42%), Gaps = 34/435 (7%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A +V G I+ G++P A L LI C E+ A Q D++ ++++ T++
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEIS----EPDKIARTTMVS 88
Query: 127 GLCRMGQTRASLQLLRQV--EGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKV 184
G C G + L R V + + + VMYN +I + A NLF +M +
Sbjct: 89 GYCASGD----ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 185 SPDVVTYNSLLYGFCIVG-QLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
PD T+ S+L G +V K+ + + G N LV K +
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+ + + ++ D ++ ++M GY + +L M + +Y+ +I G
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD---NMKLVAYNAMISGY 261
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
EAL + M I D TY S+I +G + +L ++H +
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLL----QLGKQVHAYVLRRED 317
Query: 364 FTY---NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
F++ NSL+ + K D+A A+ +KM + D+V++N L+ G G + A+ +
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLI 373
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII--CAL 478
F+++ K + ++ IMI+GL + G +E L L S M+ +G P F I CA+
Sbjct: 374 FKEMKEK----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 479 ---FEKGDNYKAEKL 490
+ G Y A+ L
Sbjct: 430 LGAYCNGQQYHAQLL 444
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 192/464 (41%), Gaps = 49/464 (10%)
Query: 66 SAFSVLGKILKKGYRPDAVTLTTLIKGLCL-KGEVRRALQFHDDVVARGFRLNQVSYGTL 124
SA ++ K+ +G++PD T +++ GL L + ++ +QFH + G L
Sbjct: 131 SAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNAL 190
Query: 125 IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK-K 183
+ + + + L R+V +++ + + T++ K+ F+L E++
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY----FDLGEELLEGMD 246
Query: 184 VSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAK 243
+ +V YN+++ G+ G +EA E++ M I D T+ +++ A G ++ K
Sbjct: 247 DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
Query: 244 NVLAVMMKQG------------------------------VKPDLFTYNSLMDGYCLVNE 273
V A ++++ DL ++N+L+ GY
Sbjct: 307 QVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
I +A I M ++ N+ S+ I+I GL +N +E L LF+ M+ P +S
Sbjct: 367 IGEAKLIFKEMKEK----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
I G + + ++ G + N+L+ + K V++A + + M
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM---- 478
Query: 394 IQP--DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDE 451
P D V++N L+ L + G A +V+++++ KG T ++ GL D+
Sbjct: 479 --PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQ 536
Query: 452 ALALLSEMEDKGCI-PDAITFETIICALFEKGDNYKAEKLLREM 494
ME I P A + +I L G AE ++ +
Sbjct: 537 GRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 147/348 (42%), Gaps = 21/348 (6%)
Query: 62 GQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSY 121
G+ A ++ K+ K D V+ L+ G G + A ++ + N +S+
Sbjct: 334 GKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILSW 385
Query: 122 GTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVV 181
+I GL G L+L ++ +P ++ I S + ++++
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK 445
Query: 182 KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGP--DVITFNTLVDALGKEGNV 239
+ N+L+ + G ++EA ++ M P D +++N L+ ALG+ G+
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEARQVFRTM------PCLDSVSWNALIAALGQHGHG 499
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ-RGVTPNVHSYSI 298
EA +V M+K+G++PD T +++ +++ +SM + P Y+
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR 559
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+I LC++ +A ++ +E + P + +L+ G G + D++
Sbjct: 560 LIDLLCRSGKFSDAESV---IESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGL- 615
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMD 406
P TY L ++ + ++ + K MRD+G++ +V I M+
Sbjct: 616 IPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEME 663
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 120/233 (51%), Gaps = 13/233 (5%)
Query: 191 YNSLLYGFCIVGQLKEATELLDEM-TRKNI--GPDVITFNTLVDALGKEGN--------V 239
YNS+++ F G+L A + M T KN+ P + T++ L AL GN +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 240 KEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ-RGVTPNVHSYSI 298
+ +++ M+ G++PD+F N L+ GY L +N A+ I + M+ PN +Y
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
+IHGLC A L +EM+ +P+ +Y+SL++ SG I A + + EM G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKE 411
+ D +Y +L+D C+ D+A L + +R++ + D +Y+ L++ L K+
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVLHKD 441
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKII---PDTITYSSLIDGLCKSGR---ISHAW- 348
Y+ II K + A+N+F M K + P TY L L G I+H +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 349 ----ELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD-QGIQPDVVTYNI 403
L +M + G D F N L+ S HV+ A+ + +M +P+ TY+
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 404 LMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG 463
L+ GLC +GR NA+E+ ++ KG+ ++YN ++N G D+A+ L EM + G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 464 CIPDAITFETIICALFEKGDNYKAEKLLREMMARGLLEK 502
+ D I++ T++ KG +A +LL + + L+++
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDR 428
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 45 IFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQ 104
+F LLG S I + + S+ +++ G PD L L+KG L V AL+
Sbjct: 251 LFKALLGRGNN-SYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALR 309
Query: 105 -FHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSL 163
FH V N +Y LI GLC G+T + +LL +++G PN YN+++++
Sbjct: 310 IFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAF 369
Query: 164 CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDV 223
+ DA EM+ D ++Y +L+ C G+ EAT LL EM R+ D
Sbjct: 370 ALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLVDR 428
Query: 224 ITFNTLVDALGKE 236
+++ LV+ L K+
Sbjct: 429 DSYDKLVNVLHKD 441
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 140 LLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM-VVKKVSPDVVTYNSLLYGF 198
L RQ+ ++P+V N ++ V+DA +F +M VV P+ TY+ L++G
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
C G+ A ELL EM K P+ ++N+LV+A G + +A L M++ G D
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQR 287
+Y +L+D C + ++A +L + ++
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREK 423
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 15/257 (5%)
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRG-VTPNVHSYSIIIHGLCKNKMVDEALN 314
P FT L D L + + N +Q+ T SY I I L KM E +
Sbjct: 134 PPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDD 193
Query: 315 LFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG----QPADKFTYNSLL 370
+ ++ ++ I + Y+S+I K+G++ A + M +P + TY+ L
Sbjct: 194 IVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIR-TYHILF 252
Query: 371 DVLCKS------HHV--DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQ 422
L +HV + +L ++M D GI+PDV N L+ G + +A +F
Sbjct: 253 KALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFH 312
Query: 423 DL-VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEK 481
+ V+ TY+ +I+GLC +G A LLSEM+ KG +P+ ++ +++ A
Sbjct: 313 QMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALS 372
Query: 482 GDNYKAEKLLREMMARG 498
G+ A K L EM+ G
Sbjct: 373 GEIDDAVKCLWEMIENG 389
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 185/414 (44%), Gaps = 16/414 (3%)
Query: 81 PDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQL 140
P+++ ++ L E R + F+ + G RL+Q S+ ++K + ++ ++L
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 141 LRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
+ + +D ++ A N+F EM + DVVT+N+++ +C
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR----DVVTWNTMIERYCR 189
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
G + EA +L +EM N+ PD + +V A G+ GN++ + + +++ V+ D
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEME 320
+L+ Y ++ A M+ R N+ + ++ G K +D+A +F + E
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 321 CIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVD 380
D + ++++I +S A + +EM G D + S++ +D
Sbjct: 306 ----KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 381 KAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMI 440
KA + + G++ ++ N L++ K G L ++VF+ + + V +++ MI
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR----NVVSWSSMI 417
Query: 441 NGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
N L G +AL+L + M+ + P+ +TF ++ G + +K+ M
Sbjct: 418 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 158/356 (44%), Gaps = 16/356 (4%)
Query: 61 FGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVS 120
FG + AF + ++ PD + L ++ G +R ++ ++ R++
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT-- 247
Query: 121 YGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMV 180
L+ L M + + R+ + N+ + ++ K + DA +F +
Sbjct: 248 --HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 181 VKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVK 240
K D+V + +++ + +EA + +EM I PDV++ +++ A G +
Sbjct: 306 KK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 241 EAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIII 300
+AK V + + G++ +L N+L++ Y ++ + M +R NV S+S +I
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR----NVVSWSSMI 417
Query: 301 HGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQP 360
+ L + +AL+LFA M+ + P+ +T+ ++ G SG + ++ M ++
Sbjct: 418 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 477
Query: 361 ADKFT-YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
K Y ++D+ +++ + +A+ + + M + +VV + LM G L+
Sbjct: 478 TPKLEHYGCMVDLFGRANLLREALEVIESM---PVASNVVIWGSLMSACRIHGELE 530
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 40 DDAISIFNR------LLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGL 93
DDA IF++ + T+ + +E A V ++ G +PD V++ ++I
Sbjct: 295 DDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISAC 354
Query: 94 CLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNV 153
G + +A H + G LI + G A+ R V + + NV
Sbjct: 355 ANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT----RDVFEKMPRRNV 410
Query: 154 VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDE 213
V ++++I++L SDA +LF+ M + V P+ VT+ +LYG G ++E ++
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 214 MTRK-NIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
MT + NI P + + +VD G+ ++EA V+ M V ++ + SLM
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM---PVASNVVIWGSLMSA 522
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 213/497 (42%), Gaps = 48/497 (9%)
Query: 30 HSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFS----------VLGKILKKGY 79
+S SP N D A+ + +L +P F + A S V G ++K G+
Sbjct: 82 YSNSP---NPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGF 138
Query: 80 RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQ 139
+ T L+ GEV L+ +D+ + N V++G+LI G + +++
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP----QWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 140 LLRQVEGHLVKPN-VVMYNTIID-SLCKDKLVSDAFNLFSE------MVVKKVSPDVVTY 191
R+++ + VK N +M + ++ CKD + F+ F + KV +V+
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILA 254
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
SL+ + G L+ A L D M + + +++N+++ + G+ +EA + M+
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTL----VSWNSIITGYSQNGDAEEALCMFLDMLD 310
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDE 311
G+ PD T+ S++ + +I +++ G + +++ K +
Sbjct: 311 LGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAES 370
Query: 312 ALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPA-DKFTYNSLL 370
A F ++E DTI ++ +I GL G + A + M KG D TY +L
Sbjct: 371 AKKAFEDLE----KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 371 DVLCKSHHVDKAIALTKKMRD-QGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGY 429
V++ +MRD G++P V Y ++D L + GR + A+ + + + +K
Sbjct: 427 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP- 485
Query: 430 HVTVRTYNIMINGLC----KEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNY 485
V + ++NG C L D ++++E E+ G ++ ++ K +
Sbjct: 486 --NVNIWGALLNG-CDIHENLELTDRIRSMVAEPEELGS-----GIYVLLSNIYAKAGRW 537
Query: 486 KAEKLLREMMARGLLEK 502
KL+RE M ++K
Sbjct: 538 ADVKLIRESMKSKRVDK 554
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 174/443 (39%), Gaps = 107/443 (24%)
Query: 137 SLQLLRQVEGHLVKP----NVVMYNTIID--SLCKDKL-VSDAFNLFSEMVVKKVSPDVV 189
SL L Q+ G ++K NV+ + +ID + C + + +S A ++F + P V
Sbjct: 18 SLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC----PSVY 73
Query: 190 TYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVM 249
+NS++ G+ +A EM RK PD TF ++ A +++ V +
Sbjct: 74 IWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV 133
Query: 250 MKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMV 309
+K G + +++ L+ Y E+N + + + Q NV ++ +I G N
Sbjct: 134 VKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW----NVVAWGSLISGFVNNNRF 189
Query: 310 DEALNLFAEME--------------------CIKIIP----------------------- 326
+A+ F EM+ C I+
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF 249
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
+ I +SLID K G + A L D M + ++NS++ ++ ++A+ +
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPER----TLVSWNSIITGYSQNGDAEEALCMF 305
Query: 387 KKMRDQGIQPDVVTY-----------------------------------NILMDGLCKE 411
M D GI PD VT+ L++ K
Sbjct: 306 LDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKT 365
Query: 412 GRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKG-CIPDAIT 470
G ++A++ F+DL K + ++I GL G +EAL++ M++KG PD IT
Sbjct: 366 GDAESAKKAFEDLEKK----DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421
Query: 471 FETIICA-----LFEKGDNYKAE 488
+ ++ A L E+G Y AE
Sbjct: 422 YLGVLYACSHIGLVEEGQRYFAE 444
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 167/340 (49%), Gaps = 36/340 (10%)
Query: 160 IDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNI 219
I L + +++A F + K + ++NS++ G+ G KEA +L DEM+ +N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIG----SWNSIVSGYFSNGLPKEARQLFDEMSERN- 78
Query: 220 GPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
V+++N LV K + EA+NV +M ++ V ++ +++ GY + +A +
Sbjct: 79 ---VVSWNGLVSGYIKNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAES 131
Query: 280 ILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
+ M +R N S++++ GL + +D+A L+ M + D + +++I GLC
Sbjct: 132 LFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGLC 183
Query: 340 KSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVV 399
+ GR+ A + DEM + + T+ +++ +++ VD A L + M ++ V
Sbjct: 184 REGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEV 235
Query: 400 TYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
++ ++ G GR+++A+E F+ + +K V N MI G + G +A + M
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLM 291
Query: 460 EDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
ED+ D T+ +I A KG +A L +M +G+
Sbjct: 292 EDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 194/467 (41%), Gaps = 95/467 (20%)
Query: 74 ILKKGY-RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMG 132
IL++ Y V + I L G++ A +F D + + S+ +++ G G
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIG----SWNSIVSGYFSNG 62
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+ + QL + + + NVV +N ++ K++++ +A N+F M + +VV++
Sbjct: 63 LPKEARQLFDE----MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWT 114
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
+++ G+ G + EA L M +N + F L+D +G + +A+ + +M +
Sbjct: 115 AMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKARKLYDMMPVK 170
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEA 312
D+ +++ G C +++A I + M +R NV +++ +I G +N VD A
Sbjct: 171 ----DVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVA 222
Query: 313 LNLFAEM-------------------------ECIKIIP--DTITYSSLIDGLCKSGRIS 345
LF M E +++P I +++I G + G IS
Sbjct: 223 RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEIS 282
Query: 346 HAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP--------- 396
A + D M ++ D T+ ++ + +A+ L +M+ QG++P
Sbjct: 283 KARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 397 --------------------------DVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
DV ++LM K G L A+ VF K
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK--- 395
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+ +N +I+G GL +EAL + EM G +P+ +T I+ A
Sbjct: 396 -DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 141/327 (43%), Gaps = 20/327 (6%)
Query: 84 VTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQ 143
V+ T+++ G L G + A +F + + + ++ +I G +G+ + ++
Sbjct: 235 VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV----IACNAMIVGFGEVGEISKARRVFDL 290
Query: 144 VEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQ 203
+E + + +I + + +A +LF++M + V P + S+L +
Sbjct: 291 MEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLAS 346
Query: 204 LKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNS 263
L+ ++ + R DV + L+ K G + +AK V + D+ +NS
Sbjct: 347 LQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNS 402
Query: 264 LMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC-I 322
++ GY +A+ I + M G PN + I+ ++E L +F ME
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF 462
Query: 323 KIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSH-HVDK 381
+ P YS +D L ++G++ A EL++ M K D + +LL CK+H +D
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIK---PDATVWGALLGA-CKTHSRLDL 518
Query: 382 AIALTKKMRDQGIQPDVVTYNILMDGL 408
A KK+ + +PD +L+ +
Sbjct: 519 AEVAAKKLFEN--EPDNAGTYVLLSSI 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 112/276 (40%), Gaps = 45/276 (16%)
Query: 30 HSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTL 89
++LS I +A++ + + I+ FG++ S ++ D T +
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEV-GEISKARRVFDLMEDRDNATWRGM 302
Query: 90 IKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLV 149
IK KG AL + +G R S+ +LI L + T ASLQ RQV HLV
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVR---PSFPSLISILS-VCATLASLQYGRQVHAHLV 358
Query: 150 K-----------------------------------PNVVMYNTIIDSLCKDKLVSDAFN 174
+ +++M+N+II L +A
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 175 LFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK-NIGPDVITFNTLVDAL 233
+F EM P+ VT ++L G+L+E E+ + M K + P V ++ VD L
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYC 269
G+ G V +A ++ M +KPD + +L+ G C
Sbjct: 479 GRAGQVDKAMELIESMT---IKPDATVWGALL-GAC 510
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 150/331 (45%), Gaps = 34/331 (10%)
Query: 2 MLSSPRVSMSSFLRLNNF------PVVSKPSFHSHSLSPSIHNADDAISIFNRLLGTSPT 55
++S+P+ + S R+ P+++K F S P+ ++ + I LG
Sbjct: 40 IVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRY 99
Query: 56 PSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFR 115
++I+ VL K GY T LIK V + + V++ ++
Sbjct: 100 FNLID--------DVLAKHRSSGYPLTGEIFTYLIK-------VYAEAKLPEKVLSTFYK 144
Query: 116 LNQVSYGTLIKGLCRM--------GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDK 167
+ + ++ K L R+ G + + +L + H V PN YN ++ + C +
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFN 227
+S A+ LF +M+ + V PDV +Y L+ GFC GQ+ A ELLD+M K PD
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----R 260
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
TL+ L +G E K L M+ +G P N L+ G+C ++ +A ++ + +
Sbjct: 261 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 320
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
G T + ++ ++I +C N+ E + LF E
Sbjct: 321 GETLHSDTWEMVIPLIC-NEDESEKIKLFLE 350
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 274 INKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSS 333
+ KA + S GV PN SY++++ C N + A LF +M ++PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 334 LIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG 393
LI G C+ G+++ A EL+D+M NKG D+ +L+ LC D+ ++M +G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 394 IQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEAL 453
P N L+ G C G+++ A +V + ++ G + T+ ++I +C E DE+
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE---DESE 343
Query: 454 ALLSEMEDKGCIPDAITFETII 475
+ +ED + + IT +T I
Sbjct: 344 KIKLFLED--AVKEEITGDTRI 363
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 9/258 (3%)
Query: 173 FNLFSEMVVKKVSPDV-VTYNSLLYGFCIVGQLKEATELLD---EMTRKNIGPDVITFNT 228
FNL +++ K S +T Y + + K ++L +M N P N
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 229 LVDAL-GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR 287
++D L G +++A + GV P+ +YN LM +CL ++++ A + M +R
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 288 GVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
V P+V SY I+I G C+ V+ A+ L +M +PD +LI GLC G
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEG 275
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+ ++EM +KG N L+ C V++A + + + G T+ +++
Sbjct: 276 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPL 335
Query: 408 LCKEGRLKNAQEVFQDLV 425
+C E + + +D V
Sbjct: 336 ICNEDESEKIKLFLEDAV 353
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCK-SGRISHAWELVDEM 354
++ +I + K+ ++ L+ F +M P + ++D L G + A+EL
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 355 HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRL 414
G + +YN L+ C + + A L KM ++ + PDV +Y IL+ G C++G++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 415 KNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIP 466
A E+ D++ KG+ V RT +I GLC +G+FDE L EM KG P
Sbjct: 242 NGAMELLDDMLNKGF-VPDRT---LIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 367 NSLLDVLCKSH--HVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
N +LDVL SH ++ KA L K R G+ P+ +YN+LM C L A ++F +
Sbjct: 158 NRILDVLV-SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDN 484
+ + V +Y I+I G C++G + A+ LL +M +KG +PD T+I L ++G
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMF 272
Query: 485 YKAEKLLREMMARGL 499
+ +K L EM+++G
Sbjct: 273 DEGKKYLEEMISKGF 287
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 257 DLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNK-MVDEALNL 315
++FTY L+ Y K ++ M + TP + I+ L ++ + +A L
Sbjct: 120 EIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
F ++P+T +Y+ L+ C + +S A++L +M + D +Y L+ C+
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
V+ A+ L M ++G PD L+ GLC +G ++ ++++ KG+
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 293
Query: 436 YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
N ++ G C G +EA ++ + G + T+E +I
Sbjct: 294 SNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y +LID + R S + L E+ FTY L+ V ++ +K ++ KM
Sbjct: 99 YFNLIDDVLAKHR-SSGYPLTGEI---------FTY--LIKVYAEAKLPEKVLSTFYKML 146
Query: 391 DQGIQPDVVTYNILMDGLCK-EGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
+ P N ++D L G L+ A E+F+ + G R+YN+++ C
Sbjct: 147 EFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL 206
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGLL 500
A L +M ++ +PD +++ +I KG A +LL +M+ +G +
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV 257
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 153/345 (44%), Gaps = 4/345 (1%)
Query: 79 YRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASL 138
Y+P+ LI L + +A + +++ G +N Y L+ R G+ A+
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 139 QLL-RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLL-- 195
LL R H +P+V Y+ +I S + +L S+M + + P+ +TYN+L+
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 196 YGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK 255
YG + E+T L+ + + PD T N+ + A G G ++ +N G++
Sbjct: 266 YGKAKMFVEMEST-LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIE 324
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNL 315
P++ T+N L+D Y K A++ M + + + +Y+++I + + + L
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYL 384
Query: 316 FAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCK 375
F M+ +I P +T SL+ ++ + ++ + N D +N L+D +
Sbjct: 385 FRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGR 444
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
+ + + M +G +PD +TY ++ G + +E+
Sbjct: 445 MEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 5/272 (1%)
Query: 221 PDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAI 280
P+V + L+ LGK ++A + M+ +G + Y +L+ Y + A +
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 281 LNSM-AQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLC 339
L M + P+VH+YSI+I + D+ +L ++M I P+TITY++LID
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 340 KSGR-ISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDV 398
K+ + L+ + D +T NS L + ++ +K + GI+P++
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNI 327
Query: 399 VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSE 458
T+NIL+D K G K V + + Y T+ TYN++I+ + G + L
Sbjct: 328 RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRL 387
Query: 459 MEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
M+ + P +T +++ A G KA+K+
Sbjct: 388 MQSERIFPSCVTLCSLVRAY---GRASKADKI 416
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 45/345 (13%)
Query: 173 FNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDA 232
F L E + K P+V Y L+ Q ++A EL EM + + + LV A
Sbjct: 137 FELLREQLWYK--PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 194
Query: 233 LGKEGNVKEAKNVLAVMMK-QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
+ G A +L M +PD+ TY+ L+ + V +K +L+ M ++G+ P
Sbjct: 195 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP 254
Query: 292 NVHSYSIIIHGLCKNKMVDEA----LNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHA 347
N +Y+ +I K KM E + + E +C PD+ T +S + +G+I
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCK---PDSWTMNSTLRAFGGNGQIEMM 311
Query: 348 WELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
++ + G + T+N LLD KS + K A+ + M+ +VTYN+++D
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDA 371
Query: 408 LCKEGRLKNAQEVFQDL--------------VIKGYHVTVRT------------------ 435
+ G LK + +F+ + +++ Y +
Sbjct: 372 FGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLD 431
Query: 436 ---YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA 477
+N +++ + F E +L ME KG PD IT+ T++ A
Sbjct: 432 LVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 132/292 (45%), Gaps = 4/292 (1%)
Query: 62 GQIPSAFSVLGKILKKGY--RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
G+ +AF++L + +K + +PD T + LIK + D+ +G R N +
Sbjct: 199 GRFDAAFTLLER-MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTI 257
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHL-VKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+Y TLI + L Q+ G KP+ N+ + + + + N + +
Sbjct: 258 TYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 317
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
+ P++ T+N LL + G K+ + +++ M + + ++T+N ++DA G+ G+
Sbjct: 318 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD 377
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
+K+ + + +M + + P T SL+ Y ++ +K +L + + ++ ++
Sbjct: 378 LKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNC 437
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
++ + + E + ME PD ITY +++ SG +H EL
Sbjct: 438 LVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 286 QRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRIS 345
Q PNV Y +I L K K ++A LF EM + + Y++L+ +SGR
Sbjct: 143 QLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFD 202
Query: 346 HAWELVDEM---HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYN 402
A+ L++ M HN QP D TY+ L+ + DK L MR QGI+P+ +TYN
Sbjct: 203 AAFTLLERMKSSHN-CQP-DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYN 260
Query: 403 ILMDGL---------------------CK---------------EGRLKNAQEVFQDLVI 426
L+D CK G+++ + ++
Sbjct: 261 TLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQS 320
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYK 486
G +RT+NI+++ K G + + A++ M+ +T+ +I A GD +
Sbjct: 321 SGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQ 380
Query: 487 AEKLLREMMARGLL 500
E L R M + +
Sbjct: 381 MEYLFRLMQSERIF 394
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 211/470 (44%), Gaps = 18/470 (3%)
Query: 26 SFHSHSLSPSIHNADDAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKG-YRPDAV 84
S S +SPS+ + IS L S + +GQ+ S L K L + D+
Sbjct: 4 SLISRLVSPSLRSQPSKISALRFLTTVSAAERL--YGQLQGCTSNLEKELASANVQLDSS 61
Query: 85 TLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQV 144
+ +++ C + + L+F + G + + C + + RA L++ V
Sbjct: 62 CINEVLRR-CDPNQFQSGLRFF---IWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYV 117
Query: 145 -EGHLVKPNVVMYNT--IIDSLC-KDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
E + + V T I+ +LC + L +A + + V D V YN ++ F
Sbjct: 118 IESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFAD 177
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
G L A L+ EM + PDVIT+ ++++ G + +A + M K + T
Sbjct: 178 KGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVT 237
Query: 261 YNSLMDGYCLVNEINKAIAILNSMAQRG----VTPNVHSYSIIIHGLCKNKMVDEALNLF 316
Y+ +++G C ++ +A+ +L M + ++PN +Y+++I C+ + V+EAL +
Sbjct: 238 YSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVL 297
Query: 317 AEMECIKIIPDTITYSSLIDGLCKSGRISHAW-ELVDEMHNKGQPADKFTYNSLLDVLCK 375
M +P+ +T LI G+ ++ A +L+D++ G + ++S L +
Sbjct: 298 DRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIR 357
Query: 376 SHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRT 435
++A + + M +G++PD + + + LC R + ++Q++ K T+ +
Sbjct: 358 MKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDS 417
Query: 436 --YNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGD 483
+ +++ GLC++G EA L M DK E II AL + GD
Sbjct: 418 DIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGD 467
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 132/276 (47%), Gaps = 28/276 (10%)
Query: 249 MMKQGVKPDLFTY--NSLMDGYCLVNE---------------INKAIAILNSMAQRGVTP 291
++K KPDL Y S C VN ++A+ +L + V
Sbjct: 104 ILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCA 163
Query: 292 NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELV 351
+ +Y+++I ++ A L EM+C+ + PD ITY+S+I+G C +G+I AW L
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 352 DEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQG----IQPDVVTYNILMDG 407
EM + TY+ +L+ +CKS +++A+ L +M + I P+ VTY +++
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 408 LCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDK----G 463
C++ R++ A V + +G T ++I G+ + DE + LS++ DK G
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEN---DEDVKALSKLIDKLVKLG 340
Query: 464 CIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
+ + F + +L +AEK+ R M+ RG+
Sbjct: 341 GVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGV 376
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 146/308 (47%), Gaps = 21/308 (6%)
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
EA +L + N+ D + +N ++ +G++ A ++ M G+ PD+ TY S++
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIK-- 323
+GYC +I+ A + M++ N +YS I+ G+CK+ ++ AL L AEME
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 324 --IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL--------DVL 373
I P+ +TY+ +I C+ R+ A ++D M N+G ++ T L+ DV
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVK 327
Query: 374 CKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
S +DK + L + V+ L + R + A+++F+ ++++G
Sbjct: 328 ALSKLIDKLVKLGGVSLSECFSSATVS-------LIRMKRWEEAEKIFRLMLVRGVRPDG 380
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIP--DAITFETIICALFEKGDNYKAEKLL 491
+ + LC + + L E+E K D+ ++ L ++G++++A KL
Sbjct: 381 LACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLA 440
Query: 492 REMMARGL 499
+ M+ + +
Sbjct: 441 KSMLDKKM 448
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Query: 361 ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEV 420
AD YN ++ + ++ A L K+M G+ PDV+TY +++G C G++ +A +
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 421 FQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEME--DKGCI--PDAITFETIIC 476
+++ + TY+ ++ G+CK G + AL LL+EME D G + P+A+T+ +I
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 477 ALFEKGDNYKAEKLLREMMARGLL 500
A EK +A +L M RG +
Sbjct: 283 AFCEKRRVEEALLVLDRMGNRGCM 306
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/525 (21%), Positives = 216/525 (41%), Gaps = 103/525 (19%)
Query: 47 NRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFH 106
N + +S + +E+G+I + ++L+K D V ++ G G +
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQK----DCVIWNVMLNGYAKCGAL------- 220
Query: 107 DDVVARGF---RLNQVSYGTL-IKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDS 162
D V +GF R++Q+S + + + ++ + L Q+ G +V V +I +S
Sbjct: 221 -DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 163 LCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPD 222
L F+ S++ D VT+N ++ G+ G ++E+ EM + PD
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 223 VITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGY--CLVNEINKAIAI 280
ITF++L+ ++ K N++ K + +M+ + D+F ++L+D Y C + +++
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC------RGVSM 393
Query: 281 LNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL------ 334
++ + + +V ++ +I G N + ++L +F + +KI P+ IT S+
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 335 -----------------------------IDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
ID K GR++ A+E+ + + + D +
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR----DIVS 509
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGI------------------------------- 394
+NS++ +S + AI + ++M GI
Sbjct: 510 WNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 395 ----QPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFD 450
DV + + L+D K G LK A VF+ + K + ++N +I G
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK----NIVSWNSIIAACGNHGKLK 625
Query: 451 EALALLSEM-EDKGCIPDAITFETIICALFEKGDNYKAEKLLREM 494
++L L EM E G PD ITF II + GD + + R M
Sbjct: 626 DSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 160/336 (47%), Gaps = 19/336 (5%)
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG-TLIKGLCRMG 132
++K P+ +TL +++ + + ++ + H ++ +GF N+ + G +I + G
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD-NRCNIGCAVIDMYAKCG 490
Query: 133 QTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYN 192
+ + ++ + L K ++V +N++I + S A ++F +M V + D V+ +
Sbjct: 491 RMNLAYEIFER----LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSIS 546
Query: 193 SLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQ 252
+ L + + M + ++ DV + +TL+D K GN+K A NV M ++
Sbjct: 547 AALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 253 GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR-GVTPNVHSYSIIIHGLCKNKMVDE 311
++ ++NS++ ++ ++ + + M ++ G+ P+ ++ II C VDE
Sbjct: 607 ----NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDE 662
Query: 312 ALNLFAEM-ECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
+ F M E I P Y+ ++D ++GR++ A+E V M P D + +LL
Sbjct: 663 GVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM---PFPPDAGVWGTLL 719
Query: 371 DVLCKSH-HVDKAIALTKKMRDQGIQPDVVTYNILM 405
C+ H +V+ A + K+ D + P Y +L+
Sbjct: 720 GA-CRLHKNVELAEVASSKLMD--LDPSNSGYYVLI 752
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 171/421 (40%), Gaps = 68/421 (16%)
Query: 68 FSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKG 127
F K+ + R D VT +I G G + +L F ++++ G + +++ +L+
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 128 LCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
+ + Q+ + H + ++ + + +ID+ K + VS A N+FS+ S D
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN----SVD 405
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
VV + +++ G+ G ++ E+ + + I P+ IT +++ +G +K + +
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 248 VMMKQGV-------------------------------KPDLFTYNSLMDGYCLVNEINK 276
++K+G K D+ ++NS++ + +
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 277 AIAILNSMAQRGVTPNV---------------HSYSIIIHGL-----------CKNKMVD 310
AI I M G+ + S+ IHG ++ ++D
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLID 585
Query: 311 ---EALNLFAEMECIKIIPD--TITYSSLIDGLCKSGRISHAWELVDEMHNK-GQPADKF 364
+ NL A M K + + ++++S+I G++ + L EM K G D+
Sbjct: 586 MYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 645
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKM-RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
T+ ++ C VD+ + + M D GIQP Y ++D + GRL A E +
Sbjct: 646 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 705
Query: 424 L 424
+
Sbjct: 706 M 706
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 154/363 (42%), Gaps = 47/363 (12%)
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
L + ++ +N+II S ++ L++ A + +M+ VSPDV T+ L+ + K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
L D ++ + + ++L+ A + G + +V + + + ++ D +N +++G
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI----DVPSKLFDRVLQKDCVIWNVMLNG 213
Query: 268 YCLVNEINKAIAILNSMAQRGVTPNVHSYSII---------------IHGLC-------- 304
Y ++ I + M ++PN ++ + +HGL
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 305 ---KNKMV---------DEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
KN ++ D+A LF M DT+T++ +I G +SG + +
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
EM + G D T++SLL + K +++ + + I D+ + L+D K
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR 389
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
+ AQ +F + V V + MI+G GL+ ++L + + P+ IT
Sbjct: 390 GVSMAQNIFS----QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLV 445
Query: 473 TII 475
+I+
Sbjct: 446 SIL 448
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 134/300 (44%), Gaps = 16/300 (5%)
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLD--EMTRKNIGPDVITFNTLVDALGKE 236
++V +S D T +L + + G + ++ ++ R +I P +N+++ + +
Sbjct: 61 LIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRP----WNSIISSFVRN 116
Query: 237 GNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAIL-NSMAQRGVTPNVHS 295
G + +A M+ GV PD+ T+ L+ C+ + K I L ++++ G+ N
Sbjct: 117 GLLNQALAFYFKMLCFGVSPDVSTFPCLVKA-CVALKNFKGIDFLSDTVSSLGMDCNEFV 175
Query: 296 YSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH 355
S +I + +D LF + + D + ++ +++G K G + + M
Sbjct: 176 ASSLIKAYLEYGKIDVPSKLFDRV----LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 356 NKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
+ T++ +L V +D + L + G+ + N L+ K GR
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 416 NAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+A ++F+ + T+N MI+G + GL +E+L EM G +PDAITF +++
Sbjct: 292 DASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 159/347 (45%), Gaps = 18/347 (5%)
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATEL 210
PN +N++I + A +F EM++ V PD ++ +L +E ++
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 211 LDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCL 270
+ + DV NTLV+ G+ G + A+ VL M + D ++NSL+ Y
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYLE 218
Query: 271 VNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT 330
+++A A+ + M +R NV S++ +I G +V EA +F M + D ++
Sbjct: 219 KGLVDEARALFDEMEER----NVESWNFMISGYAAAGLVKEAKEVFDSMP----VRDVVS 270
Query: 331 YSSLIDGLCKSGRISHAWELVDEM-HNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKM 389
+++++ G + E+ ++M + + D FT S+L + + + +
Sbjct: 271 WNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYI 330
Query: 390 RDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLF 449
GI+ + L+D K G++ A EVF+ + V T+N +I+ L GL
Sbjct: 331 DKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR----DVSTWNSIISDLSVHGLG 386
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMA 496
+AL + SEM +G P+ ITF ++ A G +A KL EMM+
Sbjct: 387 KDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF-EMMS 432
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 163/382 (42%), Gaps = 32/382 (8%)
Query: 48 RLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD 107
R S TP + A +V ++L PD + T ++K Q H
Sbjct: 113 RAYANSSTPEV--------ALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHG 164
Query: 108 DVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDK 167
+ G + TL+ R G ++ R+V + + V +N+++ + +
Sbjct: 165 LFIKSGLVTDVFVENTLVNVYGRSGY----FEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFN 227
LV +A LF EM + V ++N ++ G+ G +KEA E+ D M + DV+++N
Sbjct: 221 LVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVR----DVVSWN 272
Query: 228 TLVDALGKEGNVKEAKNVLAVMMKQGV-KPDLFTYNSLMDGYCLVNEINKAIAILNSMAQ 286
+V A G E V M+ KPD FT S++ + +++ + + +
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 287 RGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISH 346
G+ + ++ K +D+AL +F D T++S+I L G
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATS----KRDVSTWNSIISDLSVHGLGKD 388
Query: 347 AWELVDEMHNKGQPADKFTYNSLLDVLCKSHHV---DKAIALTKKMRD-QGIQPDVVTYN 402
A E+ EM +G + T+ + VL +HV D+A L + M ++P + Y
Sbjct: 389 ALEIFSEMVYEGFKPNGITF---IGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYG 445
Query: 403 ILMDGLCKEGRLKNAQEVFQDL 424
++D L + G+++ A+E+ ++
Sbjct: 446 CMVDLLGRMGKIEEAEELVNEI 467
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 157/382 (41%), Gaps = 59/382 (15%)
Query: 72 GKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRM 131
G +K G D TL+ G A + D + R + VS+ +L+
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYLEK 219
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
G + L ++E + NV +N +I LV +A +F M V+ DVV++
Sbjct: 220 GLVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVR----DVVSW 271
Query: 192 NSLLYGFCIVGQLKEATE----LLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
N+++ + VG E E +LD+ T K PD T +++ A G++ + + V
Sbjct: 272 NAMVTAYAHVGCYNEVLEVFNKMLDDSTEK---PDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 248 VMMKQGV-------------------------------KPDLFTYNSLMDGYCLVNEINK 276
+ K G+ K D+ T+NS++ +
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 277 AIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTIT-YSSLI 335
A+ I + M G PN ++ ++ M+D+A LF M + + TI Y ++
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMV 448
Query: 336 DGLCKSGRISHAWELVDEMHNKGQPADKFT--YNSLLDVLCKSHHVDKAIALTKKMRDQG 393
D L + G+I A ELV+E+ PAD+ + SLL + +++A + ++ +
Sbjct: 449 DLLGRMGKIEEAEELVNEI-----PADEASILLESLLGACKRFGQLEQAERIANRLLELN 503
Query: 394 IQPDVVTYNILMDGLCKEGRLK 415
++ D Y + + +GR +
Sbjct: 504 LR-DSSGYAQMSNLYASDGRWE 524
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 124/272 (45%), Gaps = 41/272 (15%)
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
++ E + A M+K G+ D F+ + L+ + N K ++ +S+ R +PN +++
Sbjct: 51 SLTEIQQAHAFMLKTGLFHDTFSASKLV-AFAATNPEPKTVSYAHSILNRIGSPNGFTHN 109
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSL---------------IDGL-CKS 341
+I + + AL +F EM + PD +++ + I GL KS
Sbjct: 110 SVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 342 GRI---------------SHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
G + S +E+ ++ ++ D ++NSLL + VD+A AL
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALF 229
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKE 446
+M ++ ++ ++N ++ G G +K A+EVF + ++ V ++N M+
Sbjct: 230 DEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVR----DVVSWNAMVTAYAHV 281
Query: 447 GLFDEALALLSEM-EDKGCIPDAITFETIICA 477
G ++E L + ++M +D PD T +++ A
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSA 313
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 1/184 (0%)
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
+L E+ + ++ N +++ F Q+ + +L EM PDVIT+N+++D L
Sbjct: 163 SLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDIL 222
Query: 234 GKEGNVKEAKNVLAVMMKQ-GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPN 292
G+ G V E VL+ M + V ++ TYN++++G + + I N M Q G+ P+
Sbjct: 223 GRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPD 282
Query: 293 VHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVD 352
+ SY+ +I L ++ V E+L LF EM+ +I P Y +LID L KSG A +L D
Sbjct: 283 LLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSD 342
Query: 353 EMHN 356
E+ N
Sbjct: 343 ELKN 346
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 138/278 (49%), Gaps = 7/278 (2%)
Query: 189 VTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEA----KN 244
+ Y +L+ F G L A +LL + KNI + F L+ A G+ ++K + +
Sbjct: 71 IDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFRE 130
Query: 245 VLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLC 304
VL + K+ + D Y +L + ++ ++L +++ + + + II
Sbjct: 131 VLILPGKEPLSSD--CYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFA 188
Query: 305 KNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ-PADK 363
+ + +D+ L + EM+ + PD ITY+S++D L ++G ++ ++ M +
Sbjct: 189 ETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNI 248
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
TYN++L+ + K+ D + + +M GI+PD+++Y ++D L + G +K + +F +
Sbjct: 249 ITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDE 308
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMED 461
+ + +V Y +I+ L K G F AL L E+++
Sbjct: 309 MKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKN 346
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 140/281 (49%), Gaps = 7/281 (2%)
Query: 116 LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNL 175
++++ Y L++ R G + LL+ ++ + + ++ ++ + + + + +
Sbjct: 68 ISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRV 127
Query: 176 FSEMVV----KKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVD 231
F E+++ + +S D Y +L F T LL E++ ++ +I N ++
Sbjct: 128 FREVLILPGKEPLSSDC--YLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIF 185
Query: 232 ALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQR-GVT 290
A + + + +L M + KPD+ TYNS++D +N+ + +L++M + V+
Sbjct: 186 AFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVS 245
Query: 291 PNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWEL 350
N+ +Y+ +++G+ K D L ++ EM I PD ++Y+++ID L +SG + + L
Sbjct: 246 VNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRL 305
Query: 351 VDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRD 391
DEM + + Y +L+D L KS A+ L+ ++++
Sbjct: 306 FDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKN 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 331 YSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR 390
Y +L + ++ L+ E+ P N ++ ++ +DK + + K+M+
Sbjct: 145 YLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMK 204
Query: 391 DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIK-GYHVTVRTYNIMINGLCKEGLF 449
+ +PDV+TYN ++D L + G + V + V + TYN ++NG+ K F
Sbjct: 205 EWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRF 264
Query: 450 DEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMAR 497
D L + +EM G PD +++ +I +L G+ ++ +L EM R
Sbjct: 265 DMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQR 312
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 180/414 (43%), Gaps = 25/414 (6%)
Query: 74 ILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK--GLCRM 131
+ G+ PD T + K +R Q H V GF + +L+ G+C
Sbjct: 97 FVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVC-- 154
Query: 132 GQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTY 191
G++R + ++ G + +VV + II + L +A + FS+M V P++ TY
Sbjct: 155 GESRNACKVF----GEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATY 207
Query: 192 NSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMK 251
+L VG L + + ++ + T N L+D K + +A V + K
Sbjct: 208 VCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK 267
Query: 252 QGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM-AQRGVTPNVHSYSIIIHGLCKNKMVD 310
+ D ++NS++ G +AI + + M G+ P+ H + ++ VD
Sbjct: 268 K----DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVD 323
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
+ + I DT ++++D K G I A E+ + + +K + FT+N+LL
Sbjct: 324 HGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK----NVFTWNALL 379
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
L H +++ ++M G +P++VT+ ++ C G + + F + + Y+
Sbjct: 380 GGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYN 439
Query: 431 V--TVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
+ + Y MI+ LC+ GL DEAL L+ M K PD I+ A +G
Sbjct: 440 LFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK---PDVRICGAILSACKNRG 490
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 173/435 (39%), Gaps = 88/435 (20%)
Query: 136 ASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSP--DVVTYNS 193
+SL++ +Q++ L+ +++ + II+ + S F +S +++ + +YN+
Sbjct: 17 SSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNT 76
Query: 194 LLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQG 253
LL + + + + PD+ TF + A GK ++E K + ++ K G
Sbjct: 77 LLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMG 136
Query: 254 VKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEAL 313
D++ NSL+ Y + E A + M R +V S++ II G + + EAL
Sbjct: 137 FYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR----DVVSWTGIITGFTRTGLYKEAL 192
Query: 314 NLFAEMECIKIIPDTITY-----------------------------------SSLIDGL 338
+ F++M+ + P+ TY ++LID
Sbjct: 193 DTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 339 CKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMR-DQGIQPD 397
K ++S A + E+ K DK ++NS++ L +AI L M+ GI+PD
Sbjct: 250 VKCEQLSDAMRVFGELEKK----DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 398 --------------------------VVTYNI---------LMDGLCKEGRLKNAQEVFQ 422
++T I ++D K G ++ A E+F
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 423 DLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
+ K V T+N ++ GL G E+L EM G P+ +TF + A G
Sbjct: 366 GIRSK----NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTG 421
Query: 483 DNYKAEKLLREMMAR 497
+ + +M +R
Sbjct: 422 LVDEGRRYFHKMKSR 436
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
Q+ A V G++ KK D V+ ++I GL + A+ F L Q S G
Sbjct: 254 QLSDAMRVFGELEKK----DKVSWNSMISGLVHCERSKEAIDL--------FSLMQTSSG 301
Query: 123 TLIKG--LCRMGQTRASLQLL---RQVEGHL----VKPNVVMYNTIIDSLCKDKLVSDAF 173
G L + ASL + R V ++ +K + + I+D K + A
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 174 NLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDAL 233
+F+ + S +V T+N+LL G I G E+ +EM + P+++TF ++A
Sbjct: 362 EIFNGIR----SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC 417
Query: 234 GKEGNVKEAKNVLAVMMKQ--GVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTP 291
G V E + M + + P L Y ++D C +++A+ ++ +M V P
Sbjct: 418 CHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP---VKP 474
Query: 292 NVHSYSIIIHGLCKNK-----MVDEALNLFAEME 320
+V I+ CKN+ + E L+ F ++E
Sbjct: 475 DVRICGAILSA-CKNRGTLMELPKEILDSFLDIE 507
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 183/409 (44%), Gaps = 31/409 (7%)
Query: 31 SLSPSIHNADDAISIFNRLLGTSP------TPSIIEFGQIPSAFSVLGKILKKGYRPDAV 84
S S + + D ++SIF +P + E + S+ +L+ G +PD +
Sbjct: 68 SCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRL 127
Query: 85 TLTTLIK-----GLCLKGEVRRALQFHDDVVARGF-RLNQVSYGTLIKGLCRMGQTRASL 138
T ++K G G A + V F RL +L+ + GQ + +
Sbjct: 128 TFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRL------SLVDMYAKTGQLKHAF 181
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGF 198
Q+ + + K +++++N +I+ C+ K + A LF M + ++++L+ G+
Sbjct: 182 QVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSG----SWSTLIKGY 237
Query: 199 CIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDL 258
G+L A +L + M KN V+++ TL++ + G+ + A + M+++G+KP+
Sbjct: 238 VDSGELNRAKQLFELMPEKN----VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNE 293
Query: 259 FTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAE 318
+T +++ + I I + G+ + + ++ K +D A +F+
Sbjct: 294 YTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN 353
Query: 319 MECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHH 378
M D ++++++I G GR A + +M G+ D+ + ++L S
Sbjct: 354 MNH----KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409
Query: 379 VDKAIALTKKMR-DQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
VD + MR D I+P + Y +++D L + G+L A E+ +++ I
Sbjct: 410 VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPI 458
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 151/365 (41%), Gaps = 34/365 (9%)
Query: 141 LRQVEGHLVKPNVVMYNTIIDSL-CKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFC 199
LR V +++ V+ + C L S ++L ++ +P V+ N+L+ G
Sbjct: 45 LRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVL--NALIRGLT 102
Query: 200 IVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLF 259
+ + + M R + PD +TF ++ + K G + + A +K V D F
Sbjct: 103 ENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSF 162
Query: 260 TYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM 319
SL+D Y ++ A + R ++ ++++I+G C+ K + A LF M
Sbjct: 163 VRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSM 222
Query: 320 -------------------------ECIKIIPD--TITYSSLIDGLCKSGRISHAWELVD 352
+ +++P+ +++++LI+G ++G A
Sbjct: 223 PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 353 EMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEG 412
EM KG +++T ++L KS + I + + D GI+ D L+D K G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
L A VF ++ H + ++ MI G G F +A+ +M G PD + F
Sbjct: 343 ELDCAATVFSNM----NHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 473 TIICA 477
++ A
Sbjct: 399 AVLTA 403
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 147/346 (42%), Gaps = 18/346 (5%)
Query: 82 DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLL 141
D+ +L+ G+++ A Q ++ R + + + + LI G CR + L
Sbjct: 160 DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLF 219
Query: 142 RQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIV 201
R + + N ++T+I ++ A LF M K +VV++ +L+ GF
Sbjct: 220 RS----MPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQT 271
Query: 202 GQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTY 261
G + A EM K + P+ T ++ A K G + + ++ G+K D
Sbjct: 272 GDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIG 331
Query: 262 NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEMEC 321
+L+D Y E++ A + ++M + ++ S++ +I G + +A+ F +M
Sbjct: 332 TALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMY 387
Query: 322 IKIIPDTITYSSLIDGLCKSGRISHAWELVDEMH--NKGQPADKFTYNSLLDVLCKSHHV 379
PD + + +++ S + D M +P K Y ++D+L ++ +
Sbjct: 388 SGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKH-YVLVVDLLGRAGKL 446
Query: 380 DKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
++A L + M I PD+ T+ L + A+ V Q+L+
Sbjct: 447 NEAHELVENM---PINPDLTTWAALYRACKAHKGYRRAESVSQNLL 489
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 184/430 (42%), Gaps = 47/430 (10%)
Query: 25 PSFHSHSLSPSIHNADDAISIF-------------NRLLGTSPTPSIIEFGQIPSAFSVL 71
P H+H L +H ++ ++ F NR+ P+++ F + +S++
Sbjct: 21 PEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLV 80
Query: 72 GKILK----------KGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF-RLNQVS 120
G L+ +G D T L+K ++R H +++ GF RL ++
Sbjct: 81 GPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 121 YGT--LIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
G L RMG + +V + + NVV++N +I C V +LF +
Sbjct: 141 IGVVELYTSGGRMGDAQ-------KVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQ 193
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M + +V++NS++ G+ +EA EL EM + PD T T++ G
Sbjct: 194 MSER----SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 239 VKEAKNVLAVMMKQGVKPDLFTY-NSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+ K + + G+ D T N+L+D YC ++ A AI M +R NV S++
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR----NVVSWN 305
Query: 298 IIIHGLCKNKMVDEALNLF-AEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+I G N + ++LF A +E K+ P+ T+ ++ +G++ EL M
Sbjct: 306 TLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME 365
Query: 357 KGQ-PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLK 415
+ + A Y +++D++ +S + +A K M + + + L+ G +K
Sbjct: 366 RFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP---VNANAAMWGSLLSACRSHGDVK 422
Query: 416 NAQEVFQDLV 425
A+ +LV
Sbjct: 423 LAEVAAMELV 432
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 311 EALNLFAEMECIKIIPDTITYSSLIDGLCKS------GRISHAWELVDEMHNKGQPADKF 364
E+L+ F+ M+ I D TY+ L+ C S G+ H + H G+
Sbjct: 85 ESLSFFSSMKSRGIWADEYTYAPLLKS-CSSLSDLRFGKCVHGELIRTGFHRLGK----- 138
Query: 365 TYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDL 424
++++ + A +K+ D+ + +VV +N+++ G C G ++ +F+ +
Sbjct: 139 IRIGVVELYTSGGRMGDA----QKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM 194
Query: 425 VIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
+ ++ ++N MI+ L K G EAL L EM D+G PD T T++
Sbjct: 195 SER----SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 162/354 (45%), Gaps = 26/354 (7%)
Query: 65 PSAFSVLGKILKKGYRP-DAVTLTTLIKGLCLKGEVRRALQFHDDVVARGF-RLNQVSYG 122
P S K+ K +P + TLI+G G A + ++ G + +Y
Sbjct: 66 PPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYP 125
Query: 123 TLIKGLC-----RMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFS 177
LIK + R+G+T S+ ++R G L+ + N+++ V+ A+ +F
Sbjct: 126 FLIKAVTTMADVRLGETIHSV-VIRSGFGSLI----YVQNSLLHLYANCGDVASAYKVFD 180
Query: 178 EMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEG 237
+M K D+V +NS++ GF G+ +EA L EM K I PD T +L+ A K G
Sbjct: 181 KMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYS 297
+ K V M+K G+ +L + N L+D Y + +A + + M V N S++
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM----VDKNSVSWT 292
Query: 298 IIIHGLCKNKMVDEALNLFAEMECIK-IIPDTITYSSLIDGLCKSGRISHAWELVDEMHN 356
+I GL N EA+ LF ME + ++P IT+ ++ G + +E M
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Query: 357 KGQPADKFT-YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLC 409
+ + + + ++D+L ++ V KA K M +QP+VV + L+ G C
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLL-GAC 402
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 121/251 (48%), Gaps = 15/251 (5%)
Query: 255 KP-DLFTYNSLMDGYCLVNEINKAIAILNSMAQRG-VTPNVHSYSIIIHGLCKNKMVDEA 312
KP ++F +N+L+ GY + A ++ M G V P+ H+Y +I + M D
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV--TTMADVR 138
Query: 313 LNLFAEMECIKIIPDTITY--SSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLL 370
L I+ ++ Y +SL+ G ++ A+++ D+M K D +NS++
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVI 194
Query: 371 DVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYH 430
+ ++ ++A+AL +M +GI+PD T L+ K G L + V ++ G
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 431 VTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKL 490
+ + N++++ + G +EA L EM DK +++++ ++I L G +A +L
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 491 LREMMA-RGLL 500
+ M + GLL
Sbjct: 311 FKYMESTEGLL 321
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 60 EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQV 119
E G+ A ++ ++ KG +PD T+ +L+ G + + H ++ G N
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258
Query: 120 SYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
S L+ R G+ + L + +V N V + ++I L + +A LF M
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDE----MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 180 -VVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRK-NIGPDVITFNTLVDALGKEG 237
+ + P +T+ +LY G +KE E M + I P + F +VD L + G
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 238 NVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVN 272
VK+A + M Q P++ + +L+ G C V+
Sbjct: 375 QVKKAYEYIKSMPMQ---PNVVIWRTLL-GACTVH 405
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 189/431 (43%), Gaps = 62/431 (14%)
Query: 69 SVLGKILKKGY-RPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKG 127
S+L ++++ G RPD T ++K G+VR H V+ GF
Sbjct: 95 SILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGF------------- 141
Query: 128 LCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPD 187
+VV+ + +D K K + A +F EM + +
Sbjct: 142 ----------------------DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER----N 175
Query: 188 VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLA 247
V++ +L+ + G+L+EA + D M +N+G ++N LVD L K G++ AK +
Sbjct: 176 AVSWTALVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFD 231
Query: 248 VMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNK 307
M K+ D+ +Y S++DGY ++ A + RGV +V ++S +I G +N
Sbjct: 232 EMPKR----DIISYTSMIDGYAKGGDMVSARDLFEE--ARGV--DVRAWSALILGYAQNG 283
Query: 308 MVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNK-GQPADKFTY 366
+EA +F+EM + PD L+ + G ++ +H + + + +
Sbjct: 284 QPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV 343
Query: 367 NSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVI 426
+L+D+ K H+D+A L ++M Q D+V+Y +M+G+ G A +F+ +V
Sbjct: 344 PALIDMNAKCGHMDRAAKLFEEMP----QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Query: 427 KGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCI---PDAITFETIICALFEKGD 483
+G + +++ + L +E L M K I PD + I+ L G
Sbjct: 400 EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPD--HYSCIVNLLSRTGK 457
Query: 484 NYKAEKLLREM 494
+A +L++ M
Sbjct: 458 LKEAYELIKSM 468
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 133/315 (42%), Gaps = 60/315 (19%)
Query: 185 SPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG-PDVITFNTLVDALGKEGNVKEAK 243
SP +N L+ G+ E +L M R + PD TF ++ G V+
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 244 NVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGL 303
+V ++++ G D+ S +D Y ++ A + M +R
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER---------------- 174
Query: 304 CKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADK 363
+ +++++L+ KSG + A + D M + +
Sbjct: 175 -----------------------NAVSWTALVVAYVKSGELEEAKSMFDLMPER----NL 207
Query: 364 FTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQD 423
++N+L+D L KS + A KK+ D+ + D+++Y ++DG K G + +A+++F++
Sbjct: 208 GSWNALVDGLVKSGDLVNA----KKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEE 263
Query: 424 LVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICA------ 477
+G V VR ++ +I G + G +EA + SEM K PD ++ A
Sbjct: 264 --ARG--VDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGC 319
Query: 478 --LFEKGDNYKAEKL 490
L EK D+Y +++
Sbjct: 320 FELCEKVDSYLHQRM 334
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/477 (19%), Positives = 211/477 (44%), Gaps = 52/477 (10%)
Query: 41 DAISIFNRLLGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVR 100
D + + + + ++ S +E G++ A + ++ G PDAVT+ ++++G G +R
Sbjct: 160 DGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLR 219
Query: 101 RALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTII 160
A H + + F L++ +L+ + G +S ++ ++ K N V + +I
Sbjct: 220 IARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI----AKKNAVSWTAMI 275
Query: 161 DSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIG 220
S + + A FSEM+ + P++VT S+L ++G ++E + R+ +
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335
Query: 221 PDVITFN-TLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIA 279
P+ + + LV+ + G + + + VL V+ + ++ +NSL+ Y + +A+
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDR----NIVAWNSLISLYAHRGMVIQALG 391
Query: 280 ILNSMAQRGVTPN----------------------VHSYSI------------IIHGLCK 305
+ M + + P+ +H + I +I K
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSK 451
Query: 306 NKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFT 365
+ VD A +F +++ + +T++S++ G ++G A L D M++ ++ T
Sbjct: 452 SGSVDSASTVFNQIKHRSV----VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVT 507
Query: 366 YNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLV 425
+ +++ ++K + K+ G++ D+ T L+D K G L A+ VF+ +
Sbjct: 508 FLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMS 566
Query: 426 IKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKG 482
+ ++ +++ MIN G A++ ++M + G P+ + F ++ A G
Sbjct: 567 SR----SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSG 619
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 212/486 (43%), Gaps = 51/486 (10%)
Query: 37 HNADDAISIFNRLLGTSPTPSIIEFGQIPSAFS-----------VLGKILKKGYRPDAVT 85
H D AI +++RL+ + S F + A + V G+I+K G DAV
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVI 138
Query: 86 LTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVE 145
T+L+ G + A + D + R + V++ TL+ G+ +L++ + +
Sbjct: 139 ETSLLCMYGQTGNLSDAEKVFDGMPVR----DLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 146 GHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLK 205
V+P+ V ++++ + + A ++ ++ K D NSLL + G L
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 206 EATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLM 265
+ + +++ +KN +++ ++ + + ++A + M+K G++P+L T S++
Sbjct: 255 SSERIFEKIAKKN----AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVL 310
Query: 266 DGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM----EC 321
L+ I + ++ +R + PN S S+ + + L+AE +C
Sbjct: 311 SSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL------------VELYAECGKLSDC 358
Query: 322 ---IKIIPD--TITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKS 376
++++ D + ++SLI G + A L +M + D FT S + C++
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA-CEN 417
Query: 377 HHVDKAIALTKKMRDQGIQPDV---VTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTV 433
+ + L K++ I+ DV N L+D K G + +A VF + H +V
Sbjct: 418 AGL---VPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQI----KHRSV 470
Query: 434 RTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLRE 493
T+N M+ G + G EA++L M + +TF +I A G K + + +
Sbjct: 471 VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHK 530
Query: 494 MMARGL 499
++ GL
Sbjct: 531 LIISGL 536
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 162/388 (41%), Gaps = 57/388 (14%)
Query: 84 VTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQ 143
V +LI +G V +AL +V + + + + + I G + L +Q
Sbjct: 371 VAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL----VPLGKQ 426
Query: 144 VEGHLVKPNV---VMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCI 200
+ GH+++ +V + N++ID K V A +F+++ + V VT+NS+L GF
Sbjct: 427 IHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV----VTWNSMLCGFSQ 482
Query: 201 VGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFT 260
G EA L D M + + +TF ++ A G++++ K V ++ G+K DLFT
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFT 541
Query: 261 YNSLMDGYCLVNEIN-------------------------------KAIAILNSMAQRGV 289
+L+D Y ++N AI+ N M + G
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 290 TPNVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWE 349
PN + ++ + V+E F M+ + P++ ++ ID L +SG + A+
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYR 661
Query: 350 LVDEMHNKGQP--ADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDG 407
+ EM P AD + SL++ C+ H I K + D Y +L +
Sbjct: 662 TIKEM-----PFLADASVWGSLVNG-CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNI 715
Query: 408 LCKEG------RLKNAQEVFQDLVIKGY 429
+EG RL++A + + GY
Sbjct: 716 YAEEGEWEEFRRLRSAMKSSNLKKVPGY 743
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 167/363 (46%), Gaps = 5/363 (1%)
Query: 117 NQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLF 176
N+ + ++ L R+ + R++L+L + ++PN N+ + L ++ + AF +F
Sbjct: 106 NEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF 165
Query: 177 SEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTR---KNIGPDVITFNTLVDAL 233
E + KK + TY+ +L V + A + E+ R + DV+ +NT +
Sbjct: 166 -EFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLC 224
Query: 234 GKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNV 293
G+ NV E + + VM G TY+ L+ + A+ + + M ++
Sbjct: 225 GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRE 284
Query: 294 HSYSIIIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDE 353
+ +I K + D AL +F M + P+ + ++LI+ L K+G++ +++
Sbjct: 285 DAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSV 344
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQP-DVVTYNILMDGLCKEG 412
+ + G D++T+N+LL L K++ + + L +R + + + YN M K G
Sbjct: 345 LKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLG 404
Query: 413 RLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFE 472
+ A ++ ++ G V+ +YN++I+ K AL + M + C P+ T+
Sbjct: 405 YWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYL 464
Query: 473 TII 475
+++
Sbjct: 465 SLV 467
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 184/417 (44%), Gaps = 20/417 (4%)
Query: 63 QIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYG 122
++ SA + + G +P+A + + L G++++A + + + + +Y
Sbjct: 122 KVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFE-FMRKKENVTGHTYS 180
Query: 123 TLIKGLCRMGQTRASLQLLRQVEGHLVKP---NVVMYNTIIDSLCKDKLVSDAFNLFSEM 179
++K + + ++L++ R++E + +VV+YNT I SLC +++ + +E
Sbjct: 181 LMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAI-SLCGR--INNVYE--TER 235
Query: 180 VVKKVSPD-----VVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALG 234
+ + + D +TY+ L+ F G+ + A ++ DEM I ++ A
Sbjct: 236 IWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACT 295
Query: 235 KEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVH 294
KE A + M+K+G+KP+L N+L++ ++ + + + G P+ +
Sbjct: 296 KEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEY 355
Query: 295 SYSIIIHGLCKNKMVDEALNLFAEMECIKIIP-DTITYSSLIDGLCKSGRISHAWELVDE 353
+++ ++ L K ++ L LF + + + Y++ + K G A +L+ E
Sbjct: 356 TWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYE 415
Query: 354 MHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGR 413
M G +YN ++ KS A+ + + M + +P+ TY L+ C G
Sbjct: 416 MEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGS 474
Query: 414 LKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAIT 470
L + E ++K V YN I+G+C F A L +M + G PD T
Sbjct: 475 LWDEVED----ILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKT 527
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 177/419 (42%), Gaps = 20/419 (4%)
Query: 41 DAISIFN--RLLGTSPTP--------SIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLI 90
A+ +F+ R LG P ++ G I AF+V + ++K T + ++
Sbjct: 125 SALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKENVTGHTYSLML 183
Query: 91 KGLCLKGEVRRALQFHDDVVARGFR---LNQVSYGTLIKGLCRMGQTRASLQLLRQVEGH 147
K + AL+ ++ R + V Y T I R+ + ++ R ++G
Sbjct: 184 KAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGD 243
Query: 148 LVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEA 207
+ Y+ ++ + A +++ EMV K+S +++ + A
Sbjct: 244 GHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLA 303
Query: 208 TELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDG 267
++ M +K + P+++ NTL+++LGK G V V +V+ G KPD +T+N+L+
Sbjct: 304 LKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTA 363
Query: 268 YCLVNEINKAIAILNSMAQRGVTP-NVHSYSIIIHGLCKNKMVDEALNLFAEMECIKIIP 326
N + + + + + N + Y+ + K ++A+ L EME +
Sbjct: 364 LYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTV 423
Query: 327 DTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALT 386
T +Y+ +I KS + A + + M + + FTY SL+ D+ +
Sbjct: 424 STSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL 483
Query: 387 KKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCK 445
KK ++PDV YN + G+C K A+E++ + G +T +M+ L K
Sbjct: 484 KK-----VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 6/242 (2%)
Query: 67 AFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIK 126
A + +LKKG +P+ V TLI L G+V + + + + G + ++ ++ L+
Sbjct: 303 ALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLT 362
Query: 127 GLCRMGQTRASLQLLRQVEG-HLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVS 185
L + + LQL + +L N +YNT + S K A L EM ++
Sbjct: 363 ALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLT 422
Query: 186 PDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNV 245
+YN ++ + K A + + M +++ P+ T+ +LV + E +++
Sbjct: 423 VSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDI 482
Query: 246 LAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCK 305
L + V+PD+ YN+ + G CL E A + M + G+ P+ + ++++ L K
Sbjct: 483 L-----KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Query: 306 NK 307
++
Sbjct: 538 HQ 539
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 23/274 (8%)
Query: 225 TFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSM 284
T + + L + V+ A + M G++P+ NS + +I KA + M
Sbjct: 109 TLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFM 168
Query: 285 AQRGVTPNV--HSYSIIIHGLCKNKMVDEALNLFAEME-------CIKIIPDTITYSSLI 335
++ NV H+YS+++ + + K + AL +F E+E C D + Y++ I
Sbjct: 169 RKK---ENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCF----DVVLYNTAI 221
Query: 336 DGLCKSGRISHAWE---LVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQ 392
LC GRI++ +E + M G + TY+ L+ + + + A+ + +M +
Sbjct: 222 -SLC--GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNN 278
Query: 393 GIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEA 452
I ++ KE + A ++FQ ++ KG + N +IN L K G
Sbjct: 279 KISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLV 338
Query: 453 LALLSEMEDKGCIPDAITFETIICALFEKGDNYK 486
+ S ++ G PD T+ ++ AL+ K + Y+
Sbjct: 339 FKVYSVLKSLGHKPDEYTWNALLTALY-KANRYE 371
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 15/321 (4%)
Query: 40 DDAISIFNRL------LGTSPTPSIIEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGL 93
D+A +F+R+ T E G + +A + + +G RP+AVT+ +L+ +
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS-V 328
Query: 94 CLKGEVRRALQFHDDVVARGFRLNQVSYGTLI--KGLCRMGQTRASLQLLRQVEGHLVKP 151
C G+ AL+ +D G+ + Q Y +I L M + L +V K
Sbjct: 329 C--GD---ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKY 383
Query: 152 NVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELL 211
+ ++ II +++LVSDA LF M + V P++ T NSLL + + L++A +
Sbjct: 384 HTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIH 443
Query: 212 DEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLV 271
+T+ + LV K G ++ A + + ++ D+ + +L+ GY +
Sbjct: 444 CYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Query: 272 NEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKMVDEALNLFAEM-ECIKIIPDTIT 330
+ + A+ + M + GVTPN +++ ++ + +V+E L LF M E K + +
Sbjct: 504 GDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNH 563
Query: 331 YSSLIDGLCKSGRISHAWELV 351
Y+ ++D L ++GR+ A+ L+
Sbjct: 564 YTCIVDLLGRAGRLDEAYNLI 584
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 166/401 (41%), Gaps = 12/401 (2%)
Query: 59 IEFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHDDVVARGFRLNQ 118
+ FG++ A V + + D ++ T+I G G + AL D +V L+
Sbjct: 163 MNFGKVEMARDVFDVMKNR----DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDH 218
Query: 119 VSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSE 178
+ +++ + + + VE + + + N +++ K + +A +F
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 278
Query: 179 MVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGN 238
M + DV+T+ ++ G+ G ++ A EL M + + P+ +T +LV G
Sbjct: 279 MERR----DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALK 334
Query: 239 VKEAKNVLAVMMKQGVKPDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSI 298
V + K + ++Q V D+ SL+ Y ++ + + ++ P +S
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSA 390
Query: 299 IIHGLCKNKMVDEALNLFAEMECIKIIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKG 358
II G +N++V +AL LF M + P+ T +SL+ + A + + G
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTG 450
Query: 359 QPADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQ 418
+ L+ V K ++ A + ++++ DVV + L+ G G NA
Sbjct: 451 FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNAL 510
Query: 419 EVFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEM 459
+VF ++V G T+ +N GL +E L L M
Sbjct: 511 QVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFM 551
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 205/476 (43%), Gaps = 38/476 (7%)
Query: 43 ISIFNRLLGTSPTPSIIEF----------GQIPSAFSVLGKILKKGYR--PDAVTLTTLI 90
I+ +L P S++ + G A SV +++ +G + PD T +
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 91 KGLCLKGEVRRALQFHDDVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVK 150
K ++ L H ++ F ++ L+ G+ +++ R V +
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK----VEMARDVFDVMKN 180
Query: 151 PNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKE---- 206
+V+ +NT+I ++ ++DA +F MV + V D T S+L + G LK+
Sbjct: 181 RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML---PVCGHLKDLEMG 237
Query: 207 --ATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVKPDLFTYNSL 264
+L++E K +G + N LV+ K G + EA+ V M ++ D+ T+ +
Sbjct: 238 RNVHKLVEE---KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR----DVITWTCM 290
Query: 265 MDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHGLCKNKM-VDEALNLFAEMECIK 323
++GY ++ A+ + M GV PN + + ++ +C + + V++ L +
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV-SVCGDALKVNDGKCLHGWAVRQQ 349
Query: 324 IIPDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQPADKFTYNSLLDVLCKSHHVDKAI 383
+ D I +SLI K R+ +L + + +++++ ++ V A+
Sbjct: 350 VYSDIIIETSLISMYAKCKRV----DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDAL 405
Query: 384 ALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQEVFQDLVIKGYHVTVRTYNIMINGL 443
L K+MR + ++P++ T N L+ L+ A + L G+ ++ +++
Sbjct: 406 GLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 444 CKEGLFDEALALLSEMEDKGCIPDAITFETIICALFEKGDNYKAEKLLREMMARGL 499
K G + A + + +++K D + + +I GD + A ++ EM+ G+
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV 521
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 162/356 (45%), Gaps = 51/356 (14%)
Query: 139 QLLRQVEGHLVKPNVVMYNTIIDSLCKDKLVSDAFNLFSEMVVK-KVSPDVVTYNSLLYG 197
++LR+ L +V Y ++++ + +S L ++ +VS +++ S+ Y
Sbjct: 3 EVLRRANNAL--SSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYA 60
Query: 198 FCIVGQLKEATELLDEMTRKNIGPDVITFNTLVDALGKEGNVKEAKNVLAVMMKQGVK-- 255
C G + A +L +EM + ++ +++N ++ +EG +A +V M+ +GVK
Sbjct: 61 LC--GHITYARKLFEEMPQSSL----LSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCV 114
Query: 256 PDLFTYNSLMDGYCLVNEINKAIAILNSMAQRGVTPNVHSYSIIIHG------LCKNKMV 309
PD +TY + KA L SM +++HG ++K V
Sbjct: 115 PDGYTYPF----------VAKAAGELKSM----------KLGLVVHGRILRSWFGRDKYV 154
Query: 310 DEALNL----FAEMECIKII------PDTITYSSLIDGLCKSGRISHAWELVDEMHNKGQ 359
AL F ++E + + D I+++++I G ++G ++ A + D M N+
Sbjct: 155 QNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV 214
Query: 360 PADKFTYNSLLDVLCKSHHVDKAIALTKKMRDQGIQPDVVTYNILMDGLCKEGRLKNAQE 419
D T S+L V ++ + K + ++ + + N L++ K GR+ A+
Sbjct: 215 DLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARF 274
Query: 420 VFQDLVIKGYHVTVRTYNIMINGLCKEGLFDEALALLSEMEDKGCIPDAITFETII 475
VF + + V T+ MING ++G + AL L M+ +G P+A+T +++
Sbjct: 275 VFDRMERR----DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 17/209 (8%)
Query: 52 TSPTPSII----EFGQIPSAFSVLGKILKKGYRPDAVTLTTLIKGLCLKGEVRRALQFHD 107
T P +II + + A + ++ ++ P+ TL +L+ ++R+A+ H
Sbjct: 385 TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC 444
Query: 108 DVVARGFRLNQVSYGTLIKGLCRMGQTRASLQLLRQVEGHLVKPNVVMYNTIIDSLCKDK 167
+ GF + + L+ + G ++ ++ ++ +VV++ +I
Sbjct: 445 YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
Query: 168 LVSDAFNLFSEMVVKKVSPDVVTYNSLLYGFCIVGQLKEATELLDEM-------TRKNIG 220
+A +F EMV V+P+ +T+ S L G ++E L M R N
Sbjct: 505 DGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSN-- 562
Query: 221 PDVITFNTLVDALGKEGNVKEAKNVLAVM 249
+ +VD LG+ G + EA N++ +
Sbjct: 563 ----HYTCIVDLLGRAGRLDEAYNLITTI 587