Miyakogusa Predicted Gene

Lj4g3v0644110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0644110.1 tr|J9I967|J9I967_9SPIT Calcyclin-binding protein
OS=Oxytricha trifallax PE=4 SV=1,36.97,4e-19,SUBFAMILY NOT NAMED,NULL;
CALICYLIN BINDING PROTEIN,NULL; no description,NULL; SGS,SGS;
CS,CS-like d,CUFF.47784.1
         (218 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30070.1 | Symbols:  | SGS domain-containing protein | chr1:1...   305   1e-83
AT1G30070.2 | Symbols:  | SGS domain-containing protein | chr1:1...   298   2e-81
AT1G30060.1 | Symbols:  | COP1-interacting protein-related | chr...    56   1e-08

>AT1G30070.1 | Symbols:  | SGS domain-containing protein |
           chr1:10546794-10548072 REVERSE LENGTH=222
          Length = 222

 Score =  305 bits (781), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 145/219 (66%), Positives = 180/219 (82%), Gaps = 5/219 (2%)

Query: 1   MAEEFALDLDELRHLHSIAKRPRTLSLLSSEIRNLEKLSSESSSARA-----AQIPAPIA 55
           MAEE  LDL+ELR L +IAKRPR L+L++SEI NLEKL   + S+ A       +PAP++
Sbjct: 1   MAEEVGLDLEELRQLQNIAKRPRVLNLINSEISNLEKLRDSAVSSNAKPKVPVTVPAPVS 60

Query: 56  TGTKVSPTVALSYSPLASFSWDQDNEKVKIYVSLEGVDESKIASELKPSSLDLKFHDIQG 115
           +  K   + AL+Y  L +FSWDQDN+KVK+Y+SLEGVDE K+ +E KP SLD+K HD+QG
Sbjct: 61  SSGKPVSSSALNYVTLGTFSWDQDNDKVKMYISLEGVDEDKVQAEFKPMSLDIKIHDVQG 120

Query: 116 KNYRFAISKLHKEIVPEKCKVLVKPTRVIITLVKASKANWLDLHFKEEKLKPNLDKEKDP 175
           KNYR AI KL KEI+PEKCKVLVKP R++IT+VK+S+ NWLD+H KE+K+KP+L+KEKDP
Sbjct: 121 KNYRCAIPKLCKEIMPEKCKVLVKPKRIVITMVKSSRGNWLDIHHKEDKIKPSLEKEKDP 180

Query: 176 MAGIMDLMKNMYEEGDEEMKKTIAKAWTDARSGKAADPL 214
           MAGIM +MKN+YE+GDEEMKKTIAKAWTDARSGKAADPL
Sbjct: 181 MAGIMGMMKNLYEDGDEEMKKTIAKAWTDARSGKAADPL 219


>AT1G30070.2 | Symbols:  | SGS domain-containing protein |
           chr1:10546794-10548072 REVERSE LENGTH=229
          Length = 229

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/228 (63%), Positives = 180/228 (78%), Gaps = 12/228 (5%)

Query: 1   MAEEFALDLDELRHLHSIAKRPRTLSLLSSEIRNLEKLSSESSSARA-----AQIPAPIA 55
           MAEE  LDL+ELR L +IAKRPR L+L++SEI NLEKL   + S+ A       +PAP++
Sbjct: 1   MAEEVGLDLEELRQLQNIAKRPRVLNLINSEISNLEKLRDSAVSSNAKPKVPVTVPAPVS 60

Query: 56  TGTKVSPTVALSYSPLASFSWDQDNEKVKIYVSLEGVDESKIASELKPSSLDLKFHDIQG 115
           +  K   + AL+Y  L +FSWDQDN+KVK+Y+SLEGVDE K+ +E KP SLD+K HD+QG
Sbjct: 61  SSGKPVSSSALNYVTLGTFSWDQDNDKVKMYISLEGVDEDKVQAEFKPMSLDIKIHDVQG 120

Query: 116 KNYRFAISKLHKEIVPEKCKVLVKPTRVIITLVKASKANWLDLHFKEEK-------LKPN 168
           KNYR AI KL KEI+PEKCKVLVKP R++IT+VK+S+ NWLD+H KE+K       +KP+
Sbjct: 121 KNYRCAIPKLCKEIMPEKCKVLVKPKRIVITMVKSSRGNWLDIHHKEDKYCLLFVQIKPS 180

Query: 169 LDKEKDPMAGIMDLMKNMYEEGDEEMKKTIAKAWTDARSGKAADPLSS 216
           L+KEKDPMAGIM +MKN+YE+GDEEMKKTIAKAWTDARSGKAADPL  
Sbjct: 181 LEKEKDPMAGIMGMMKNLYEDGDEEMKKTIAKAWTDARSGKAADPLKG 228


>AT1G30060.1 | Symbols:  | COP1-interacting protein-related |
           chr1:10545087-10545906 REVERSE LENGTH=176
          Length = 176

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/26 (96%), Positives = 26/26 (100%)

Query: 189 EGDEEMKKTIAKAWTDARSGKAADPL 214
           +GDEEMKKTIAKAWTDARSGKAADPL
Sbjct: 148 DGDEEMKKTIAKAWTDARSGKAADPL 173