Miyakogusa Predicted Gene

Lj4g3v0643880.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0643880.2 tr|K1PUP5|K1PUP5_CRAGI Phytanoyl-CoA dioxygenase
domain-containing protein 1 OS=Crassostrea gigas PE,32.65,0.0000008,no
description,NULL; Clavaminate synthase-like,NULL; seg,NULL;
PhyH,Phytanoyl-CoA dioxygenase; PHYTA,CUFF.47769.2
         (249 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01490.1 | Symbols:  | phytanoyl-CoA dioxygenase (PhyH) famil...   384   e-107

>AT2G01490.1 | Symbols:  | phytanoyl-CoA dioxygenase (PhyH) family
           protein | chr2:221316-223187 FORWARD LENGTH=283
          Length = 283

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/248 (71%), Positives = 213/248 (85%), Gaps = 1/248 (0%)

Query: 1   MMKRMEQLVDNFDPSSTASIFSTKNQQKLTDDYFFDSVERVSFFFEEKAFGDNGDLKQPK 60
           + KRM++L++ FD  S +SIFSTKNQ+  TD+YFF+S E++SFFFEEKAFGD+G LKQPK
Sbjct: 35  LRKRMDELLNQFD-CSVSSIFSTKNQKHTTDNYFFESAEKISFFFEEKAFGDDGKLKQPK 93

Query: 61  QLSINKVGHALHEIEPAXXXXXXXXXXXXLMHSLGYKRPAVMQSMYIFKQPGIGGEVVPH 120
           QLSINKVGHALHE++P             L  SLGY+RP VMQSMYIFKQPGIGGEVVPH
Sbjct: 94  QLSINKVGHALHELDPLYKDFTYSSKFSSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPH 153

Query: 121 QDSSFLYTEPQTCTGLWLAIEDATKLNGCLWAIPGSHKNGLVRRFLRDENGVKFDRPSPS 180
           QD+SF+YT+PQ+CTGLW+A+ED+T +NGCLWAIPGSHKNGLVRRF+R +NG+ FD+PSPS
Sbjct: 154 QDNSFVYTDPQSCTGLWIALEDSTLVNGCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPS 213

Query: 181 YDQKDFVPIEVKSGSLVVIHGDLIHQSFENLSPKSRHAYSLHVVDTDGCKWAPENWIRRK 240
           Y+QKDFV IE+K+GSL+ IHGDLIHQSFENLS KSRHAYSLHVV++DGCKWA +NWI+R 
Sbjct: 214 YEQKDFVSIEMKAGSLIAIHGDLIHQSFENLSSKSRHAYSLHVVESDGCKWAKDNWIQRA 273

Query: 241 VEPEPLYV 248
             PEPLYV
Sbjct: 274 KMPEPLYV 281