Miyakogusa Predicted Gene

Lj4g3v0643850.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0643850.1 Non Chatacterized Hit- tr|I1ND97|I1ND97_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22781
PE,84.47,0,seg,NULL; Tim17,Mitochondrial inner membrane translocase
subunit Tim17/Tim22/Tim23/peroxisomal prote,CUFF.47759.1
         (217 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37410.2 | Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase i...   219   8e-58
AT2G37410.1 | Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase i...   219   8e-58
AT1G20350.1 | Symbols: ATTIM17-1, TIM17-1 | translocase inner me...   207   3e-54
AT5G11690.1 | Symbols: ATTIM17-3, TIM17-3 | translocase inner me...   125   3e-29

>AT2G37410.2 | Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase
           inner membrane subunit 17-2 | chr2:15698119-15698850
           REVERSE LENGTH=243
          Length = 243

 Score =  219 bits (559), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 105/141 (74%), Positives = 115/141 (81%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHF+KG YNSPKG R +G +Q+V +NAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           R GGSFAVWGGLFS+FDCTMVYLRQKEDPWNSI AGAATGGFLSMRQG  A++R+A FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQ 141
           VLLALIEGAGIMLNK L+  Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQ 141



 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 32/40 (80%), Gaps = 2/40 (5%)

Query: 178 WFGGGWFGKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
           WFGG +  KK+EV  G +  S+T+VLESFDAPPVP+FE+K
Sbjct: 206 WFGGLFDKKKEEVQPGSE--SKTEVLESFDAPPVPSFEFK 243


>AT2G37410.1 | Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase
           inner membrane subunit 17-2 | chr2:15698119-15698850
           REVERSE LENGTH=243
          Length = 243

 Score =  219 bits (559), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 105/141 (74%), Positives = 115/141 (81%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHF+KG YNSPKG R +G +Q+V +NAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           R GGSFAVWGGLFS+FDCTMVYLRQKEDPWNSI AGAATGGFLSMRQG  A++R+A FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQ 141
           VLLALIEGAGIMLNK L+  Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQ 141



 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 32/40 (80%), Gaps = 2/40 (5%)

Query: 178 WFGGGWFGKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
           WFGG +  KK+EV  G +  S+T+VLESFDAPPVP+FE+K
Sbjct: 206 WFGGLFDKKKEEVQPGSE--SKTEVLESFDAPPVPSFEFK 243


>AT1G20350.1 | Symbols: ATTIM17-1, TIM17-1 | translocase inner
           membrane subunit 17-1 | chr1:7043737-7044393 FORWARD
           LENGTH=218
          Length = 218

 Score =  207 bits (528), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 109/218 (50%), Positives = 130/218 (59%), Gaps = 1/218 (0%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPE+SREPCPDRILDD+             +H ++G+YNSP G RL G  QA+R++ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           R GGSF+VWGGL+S+FDC +VY RQKEDPWNSI +GAATGGFLS+RQGL AS R+A  GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKFLS-AQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSWF 179
           VLLA+IEG GIMLNK  S A                                     S  
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAATSLPYGMGQISGQSVPVPETSSSSSGSVS 180

Query: 180 GGGWFGKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
             G   KK +        S T +LESFDAPPVP +E+K
Sbjct: 181 WFGSLFKKKKETEDHHSESRTHILESFDAPPVPTYEFK 218


>AT5G11690.1 | Symbols: ATTIM17-3, TIM17-3 | translocase inner
           membrane subunit 17-3 | chr5:3761759-3762160 FORWARD
           LENGTH=133
          Length = 133

 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/127 (47%), Positives = 85/127 (66%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           M T + S+E    RI++ I             +HF++G YNSP G R +G +QA  +NAP
Sbjct: 1   MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           R+GG+FAV+GGL S+FD  +V +R+KEDPWNSI AGAATGG LS+R+G+ A++ +A   G
Sbjct: 61  RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120

Query: 121 VLLALIE 127
             LA++ 
Sbjct: 121 FFLAVLN 127