Miyakogusa Predicted Gene

Lj4g3v0632220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0632220.1 tr|Q7XLI1|Q7XLI1_ORYSJ OSJNBa0079F16.16 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0079F16.16 ,36.13,1e-18,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; AAA_17,NULL; SUBFAMI,CUFF.47893.1
         (300 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01460.1 | Symbols:  | P-loop containing nucleoside triphosph...   426   e-119
AT2G01460.2 | Symbols:  | P-loop containing nucleoside triphosph...   425   e-119
AT1G26190.1 | Symbols:  | Phosphoribulokinase / Uridine kinase f...   175   4e-44
AT1G73980.1 | Symbols:  | Phosphoribulokinase / Uridine kinase f...   166   1e-41

>AT2G01460.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:206136-211765
           FORWARD LENGTH=955
          Length = 955

 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/300 (75%), Positives = 252/300 (84%), Gaps = 6/300 (2%)

Query: 1   MDDEVVQRVFHEGGRDYFXXXXXXXXXXXXXXXXXXXXHVSFDHGYYLLVKSIQELREKK 60
           MDDEVVQRVF EGGRD+F                    HV+FDHGYYLLVKSIQELREKK
Sbjct: 1   MDDEVVQRVFQEGGRDFFQQQPSTSSSSSSILQSLPL-HVAFDHGYYLLVKSIQELREKK 59

Query: 61  DGLVTVGIGGPSGSGKTSLTEKVASVIGCTVISMENYCDGVDERNDLDSIDFDTLIKNLE 120
           DG+VTVGIGGPSGSGK+SL EKVASVIGCTVI+ME+Y D +D+ N+L+++DFD L++NLE
Sbjct: 60  DGIVTVGIGGPSGSGKSSLAEKVASVIGCTVIAMEDYRDSLDDGNELETLDFDALVQNLE 119

Query: 121 DLTTGDDTLIPEFDYQQKRCIGFKAIKSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGV 180
           DL  G DTL P FD+QQK+ +  K +K TSSGVVIVDGTYALHA+LRSLLDIRVAVVGGV
Sbjct: 120 DLINGKDTLAPVFDFQQKKRVDSKMVK-TSSGVVIVDGTYALHARLRSLLDIRVAVVGGV 178

Query: 181 HFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVK 240
           HFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYK+K
Sbjct: 179 HFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKLK 238

Query: 241 CRSESSEGHSDSVFQGNETQTDNFIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQ 300
           C++E       S  Q ++ Q DNFIEMYLRPPSASEEARINDWIKVRQ+GIRYYLSLGDQ
Sbjct: 239 CKTEIVT----SFPQESDVQKDNFIEMYLRPPSASEEARINDWIKVRQAGIRYYLSLGDQ 294



 Score =  164 bits (416), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/260 (38%), Positives = 149/260 (57%), Gaps = 14/260 (5%)

Query: 42  FDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVIGCTVISMENYCDGV 101
            D G  L V++IQ L E K   V VGIGGPSGSGKTSL  K+A+++GC V+S+E+Y    
Sbjct: 504 LDRGLLLSVQAIQALLENKGPPVIVGIGGPSGSGKTSLAHKMANIVGCEVVSLESYFKSE 563

Query: 102 D----ERNDLDSIDFDTLIKNLEDLTTGDDTLIPEFDYQQKRCIGFKAIK-STSSGVVIV 156
                + +D  S+D   L KN+ D+T    T +P FD +     GFK ++     GV+I 
Sbjct: 564 QVKDFKHDDFSSLDLPLLSKNISDITNSRRTKLPIFDLETGTRCGFKELEVPEECGVIIF 623

Query: 157 DGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYD---IGDSCSLDYLIDSIFPLFRKHI 213
           +G YALH ++R  LD+ VAVVGGVH  L+S+V+ D   IG   S + ++ ++FP+F++HI
Sbjct: 624 EGVYALHPEIRQSLDLWVAVVGGVHSHLISRVQRDKSRIGCFMSQNEIMMTVFPMFQQHI 683

Query: 214 EPDLHHAQIRINNSF--VSSFREAIYKVKCRSESSEGHSDSVFQGNE--TQTDNFIEMYL 269
           EP L HA ++I N F  V S   +++ +K   +       S+    +  +   NFI++Y 
Sbjct: 684 EPHLVHAHVKIRNDFDPVLSPESSLFVLKSNKQVPYQDILSILDSTKFCSSVQNFIDIYF 743

Query: 270 RPPSASEEARI--NDWIKVR 287
           R        ++  +D I+VR
Sbjct: 744 RLSGLPANGQLSDSDCIRVR 763


>AT2G01460.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:206136-211765
           FORWARD LENGTH=954
          Length = 954

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/300 (75%), Positives = 252/300 (84%), Gaps = 6/300 (2%)

Query: 1   MDDEVVQRVFHEGGRDYFXXXXXXXXXXXXXXXXXXXXHVSFDHGYYLLVKSIQELREKK 60
           MDDEVVQRVF EGGRD+F                    HV+FDHGYYLLVKSIQELREKK
Sbjct: 1   MDDEVVQRVFQEGGRDFFQQQPSTSSSSSSILQSLPL-HVAFDHGYYLLVKSIQELREKK 59

Query: 61  DGLVTVGIGGPSGSGKTSLTEKVASVIGCTVISMENYCDGVDERNDLDSIDFDTLIKNLE 120
           DG+VTVGIGGPSGSGK+SL EKVASVIGCTVI+ME+Y D +D+ N+L+++DFD L++NLE
Sbjct: 60  DGIVTVGIGGPSGSGKSSLAEKVASVIGCTVIAMEDYRDSLDDGNELETLDFDALVQNLE 119

Query: 121 DLTTGDDTLIPEFDYQQKRCIGFKAIKSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGV 180
           DL  G DTL P FD+QQK+ +  K +K TSSGVVIVDGTYALHA+LRSLLDIRVAVVGGV
Sbjct: 120 DLINGKDTLAPVFDFQQKKRVDSKMVK-TSSGVVIVDGTYALHARLRSLLDIRVAVVGGV 178

Query: 181 HFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVK 240
           HFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYK+K
Sbjct: 179 HFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKLK 238

Query: 241 CRSESSEGHSDSVFQGNETQTDNFIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQ 300
           C++E       S  Q ++ Q DNFIEMYLRPPSASEEARINDWIKVRQ+GIRYYLSLGDQ
Sbjct: 239 CKTEIVT----SFPQESDVQKDNFIEMYLRPPSASEEARINDWIKVRQAGIRYYLSLGDQ 294



 Score =  150 bits (378), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 144/259 (55%), Gaps = 13/259 (5%)

Query: 42  FDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVIGCTVISMENYCDGV 101
            D G  L V++IQ L E K   V VGIGGPSGSGKTSL  K+A+++GC V+S+E+Y    
Sbjct: 504 LDRGLLLSVQAIQALLENKGPPVIVGIGGPSGSGKTSLAHKMANIVGCEVVSLESYFKSE 563

Query: 102 D----ERNDLDSIDFDTLIKNLEDLTTGDDTLIPEFDYQQKRCIGFKAIKSTSSGVVIVD 157
                + +D  S+D   L KN+ D+T    T +P FD +     GFK ++      V+ D
Sbjct: 564 QVKDFKHDDFSSLDLPLLSKNISDITNSRRTKLPIFDLETGTRCGFKELEVPEECGVVSD 623

Query: 158 GTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYD---IGDSCSLDYLIDSIFPLFRKHIE 214
            +  +  ++R  LD+ VAVVGGVH  L+S+V+ D   IG   S + ++ ++FP+F++HIE
Sbjct: 624 HSLHISYEIRQSLDLWVAVVGGVHSHLISRVQRDKSRIGCFMSQNEIMMTVFPMFQQHIE 683

Query: 215 PDLHHAQIRINNSF--VSSFREAIYKVKCRSESSEGHSDSVFQGNE--TQTDNFIEMYLR 270
           P L HA ++I N F  V S   +++ +K   +       S+    +  +   NFI++Y R
Sbjct: 684 PHLVHAHVKIRNDFDPVLSPESSLFVLKSNKQVPYQDILSILDSTKFCSSVQNFIDIYFR 743

Query: 271 PPSASEEARI--NDWIKVR 287
                   ++  +D I+VR
Sbjct: 744 LSGLPANGQLSDSDCIRVR 762


>AT1G26190.1 | Symbols:  | Phosphoribulokinase / Uridine kinase
           family | chr1:9057285-9060433 REVERSE LENGTH=674
          Length = 674

 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 158/270 (58%), Gaps = 14/270 (5%)

Query: 39  HVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVI-GCTVISMENY 97
            +SF+ G++ ++++ Q L +K DG++ VG+ GPSG+GKT  TEK+ + +    VISM+NY
Sbjct: 41  RLSFEKGFFAVIRACQLLSQKNDGIILVGVAGPSGAGKTVFTEKILNFLPSVAVISMDNY 100

Query: 98  CDG---VDER-NDLDSIDFDTLIKNLEDLTTGDDTLIPEFDYQQKRCIGFKAIKSTSSGV 153
            D    VD   +D    D+DTL+KNLEDL  G    +P +D++    +G++ +    S +
Sbjct: 101 NDSSRIVDGNFDDPRLTDYDTLLKNLEDLKEGKQVEVPIYDFKSSSRVGYRTLDVPPSRI 160

Query: 154 VIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCS-----LDYLIDSIFPL 208
           VI++G YAL  KLR LLD+RV+V GGVHF L+ +V  DI  +       +  + ++++P+
Sbjct: 161 VIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQQPEEIIHQISETVYPM 220

Query: 209 FRKHIEPDLHHAQIRINNSF--VSSFREAIYKVKCRSESSEGHSDSVFQGNETQT-DNFI 265
           ++  IEPDL  AQI+I N F   + F+   Y +K R E S     +V     T+T +   
Sbjct: 221 YKAFIEPDLQTAQIKIINKFNPFTGFQSPTYILKSRKEVSVDQIKAVLSDGHTETKEETY 280

Query: 266 EMYLRPPSASEEARINDWIKVRQSGIRYYL 295
           ++YL PP    E+    ++++R    +Y L
Sbjct: 281 DIYLLPPGEDPES-CQSYLRMRNKDGKYSL 309


>AT1G73980.1 | Symbols:  | Phosphoribulokinase / Uridine kinase
           family | chr1:27820292-27823527 REVERSE LENGTH=643
          Length = 643

 Score =  166 bits (421), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 158/269 (58%), Gaps = 14/269 (5%)

Query: 40  VSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVI-GCTVISMENYC 98
           +SF+ G+Y ++++ Q L +K DGL+ VG+ GPSG+GKT  TEK+ + +    +I+M+NY 
Sbjct: 42  LSFEKGFYAVIRACQLLAQKNDGLILVGLAGPSGAGKTIFTEKILNFMPSIAIINMDNYN 101

Query: 99  DGVD----ERNDLDSIDFDTLIKNLEDLTTGDDTLIPEFDYQQKRCIGFKAIKSTSSGVV 154
           DG        +D    D+DTL+ N+  L  G    +P +D++    IG++ ++  SS +V
Sbjct: 102 DGTRVIDGNFDDPRLTDYDTLLDNIHGLRDGKPVQVPIYDFKSSSRIGYRTLEVPSSRIV 161

Query: 155 IVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCS-----LDYLIDSIFPLF 209
           I++G YAL  KLR LLD+RV+V GGVHF L+ +V  DI  +       +  + ++++P++
Sbjct: 162 ILEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMY 221

Query: 210 RKHIEPDLHHAQIRINNSF--VSSFREAIYKVK-CRSESSEGHSDSVFQGNETQTDNFIE 266
           +  IEPDL  AQI+I N F   S F+   Y +K  ++ + E    ++ +  + +T+   +
Sbjct: 222 KAFIEPDLKTAQIKILNKFNPFSGFQNPTYILKSSKAVTPEQMKAALSEDFKERTEETYD 281

Query: 267 MYLRPPSASEEARINDWIKVRQSGIRYYL 295
           +YL PP    EA    ++++R    +Y L
Sbjct: 282 IYLLPPGEDPEA-CQSYLRMRNRDGKYNL 309