Miyakogusa Predicted Gene

Lj4g3v0631050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0631050.1 tr|B9HW66|B9HW66_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_566496 PE=4
SV=1,54.76,1e-17,SERINE PROTEASE FAMILY S10 SERINE
CARBOXYPEPTIDASE,Peptidase S10, serine carboxypeptidase;
alpha/bet,NODE_24891_length_619_cov_352.967682.path2.1
         (91 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15000.1 | Symbols: scpl50 | serine carboxypeptidase-like 50 ...    80   2e-16

>AT1G15000.1 | Symbols: scpl50 | serine carboxypeptidase-like 50 |
           chr1:5168613-5169947 FORWARD LENGTH=444
          Length = 444

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%)

Query: 1   MKWEGIEQFLNAERKIWKV-NGELAGYVQNWKSLTNAVVLGAGHLLPTDQAVNSQVMIED 59
           M W G+  F  AER++WK  +G +AGYVQ W +L +  V GAGH +PTD+AVNS+ MIE 
Sbjct: 360 MNWSGLGMFSTAERRVWKDEDGVVAGYVQRWGNLCHVAVTGAGHFVPTDKAVNSRDMIEG 419

Query: 60  WVLERGSF 67
           WVL +G F
Sbjct: 420 WVLGKGLF 427