Miyakogusa Predicted Gene

Lj4g3v0620370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0620370.1 Non Chatacterized Hit- tr|D7E0U3|D7E0U3_NOSA0
Putative signal transduction protein with CBS domains
,34.9,5e-17,Domain in cystathionine beta-synthase and ot,Cystathionine
beta-synthase, core; CBS,Cystathionine be,CUFF.47678.1
         (238 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36910.1 | Symbols: LEJ2, CDCP2 | Cystathionine beta-synthase...   263   8e-71
AT4G34120.1 | Symbols: LEJ1, CDCP1 | Cystathionine beta-synthase...   263   1e-70

>AT4G36910.1 | Symbols: LEJ2, CDCP2 | Cystathionine beta-synthase
           (CBS) family protein | chr4:17391016-17393218 REVERSE
           LENGTH=236
          Length = 236

 Score =  263 bits (672), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 122/177 (68%), Positives = 153/177 (86%)

Query: 60  ASGPSATVDSVPRENGTYTVADFMTKKQNLHVAKTTTTVDEALEALVKNRISGLPVVDDD 119
           A+G +   +S    +G YTV +FMTKK++LHV K TTTVDEALE LV+NRI+G PV+D+D
Sbjct: 58  AAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED 117

Query: 120 WNLVGVVSDYDLLAIDSISGGNQNDSNLFPDVNSSWKTFNEIQKLLSKTNGQVVGDLMTP 179
           W LVG+VSDYDLLA+DSISG  + ++++FP+V+S+WKTFN +QKLLSKTNG++VGDLMTP
Sbjct: 118 WKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTP 177

Query: 180 TPLVVQESTNLEDAARLLLETKYRRLPVVDRDGKLVGLITRGNIVKAALLSKRAGDR 236
            PLVV+E TNLEDAA++LLETKYRRLPVVD DGKLVG+ITRGN+V+AAL  KR+GDR
Sbjct: 178 APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDR 234


>AT4G34120.1 | Symbols: LEJ1, CDCP1 | Cystathionine beta-synthase
           (CBS) family protein | chr4:16341194-16342893 FORWARD
           LENGTH=238
          Length = 238

 Score =  263 bits (671), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/191 (67%), Positives = 160/191 (83%), Gaps = 5/191 (2%)

Query: 47  KRRRSSHS-----ARFRLASGPSATVDSVPRENGTYTVADFMTKKQNLHVAKTTTTVDEA 101
           +RR S+ S     + F  A       +SVP +NG YTV DFMT +QNLHV K +T+VD+A
Sbjct: 42  RRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDA 101

Query: 102 LEALVKNRISGLPVVDDDWNLVGVVSDYDLLAIDSISGGNQNDSNLFPDVNSSWKTFNEI 161
           LE LV+ +++GLPV+DD+W LVGVVSDYDLLA+DSISG +QND+NLFPDV+S+WKTFNE+
Sbjct: 102 LELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNEL 161

Query: 162 QKLLSKTNGQVVGDLMTPTPLVVQESTNLEDAARLLLETKYRRLPVVDRDGKLVGLITRG 221
           QKL+SKT G+VVGDLMTP+PLVV++STNLEDAARLLLETK+RRLPVVD DGKL+G++TRG
Sbjct: 162 QKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRG 221

Query: 222 NIVKAALLSKR 232
           N+V+AAL  KR
Sbjct: 222 NVVRAALQIKR 232