Miyakogusa Predicted Gene
- Lj4g3v0620110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0620110.1 Non Chatacterized Hit- tr|I1KM15|I1KM15_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30356
PE,73.82,0,zf-RING_2,Zinc finger, RING-type; ZINC FINGER (C3HC4-TYPE
RING FINGER) FAMILY PROTEIN,NULL; RING FIN,CUFF.47662.1
(696 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 326 4e-89
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 308 6e-84
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 308 6e-84
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 308 6e-84
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 296 3e-80
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 211 1e-54
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 201 2e-51
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 141 2e-33
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 141 2e-33
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 137 2e-32
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 134 3e-31
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 134 3e-31
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 131 1e-30
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 131 1e-30
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 125 1e-28
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 125 1e-28
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 117 4e-26
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 114 2e-25
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 114 2e-25
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 114 3e-25
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 109 5e-24
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 82 1e-15
AT1G36950.1 | Symbols: | RING/U-box superfamily protein | chr1:... 80 4e-15
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 77 4e-14
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 75 1e-13
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 75 1e-13
AT4G00070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 74 3e-13
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 72 2e-12
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 9e-10
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 62 2e-09
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 62 2e-09
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 62 2e-09
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 60 5e-09
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 5e-09
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 59 1e-08
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 57 4e-08
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 56 1e-07
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 1e-07
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 1e-07
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 1e-07
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 55 2e-07
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 2e-07
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 2e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 3e-07
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 3e-07
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 54 4e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 53 6e-07
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 6e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 7e-07
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 7e-07
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 7e-07
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 7e-07
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 8e-07
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 8e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 9e-07
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 1e-06
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 52 1e-06
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 1e-06
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 1e-06
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 1e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-06
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-06
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 2e-06
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 2e-06
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-06
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-06
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 2e-06
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 2e-06
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-06
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 51 2e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 3e-06
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 51 3e-06
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 3e-06
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 4e-06
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 4e-06
AT5G37200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-06
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 8e-06
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 50 8e-06
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 50 8e-06
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 50 8e-06
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 9e-06
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 267/718 (37%), Positives = 354/718 (49%), Gaps = 74/718 (10%)
Query: 1 MQGQRRTAGSFPAIVSMMQGPGSSGTDMNNQSSLNHVQNAVDFRLSNYRGSTGETAHLRG 60
MQG R T S I G N++++ N++ N VD + N +G +
Sbjct: 1 MQGPRSTGDSSTGI---NYADGEPICSTNSETTSNNILNPVDVQFPNNTTGSGRPTYASS 57
Query: 61 TGPNV-SFSGWNNGESSSGLNLINQVNDEGLKSEHGMSSLCGTTADNGLRPEERQLHVNQ 119
+ V + + W+ GESSS L + +N G K++ + S +G EE Q
Sbjct: 58 SSHVVQNHNWWSFGESSSRLGPSDHLNSNGSKTDRQLLS-------DGYGFEEGQ--SGM 108
Query: 120 SRIHHSFLQGSSSNHISQNISL--DMGHIPNTADRGKGIETSSAAHDCNPCELGREKAPF 177
SFL+GSSS+H+ +++L DM D G G++TS N CE
Sbjct: 109 LLPGESFLRGSSSSHMLSHVNLGKDM-------DIGSGLQTSGVVIRHNNCE-------- 153
Query: 178 GIASYNHIGASSESPG--YMAWGDSASSWGPSCKRKALEGSSGHLCTEGSSSSLVQTENG 235
+G+SS++ G S G SCKRKALEG+ H S QTENG
Sbjct: 154 -----TSLGSSSQTAEERSSGPGSSLGGLGSSCKRKALEGAPSHSFPGESHGCFFQTENG 208
Query: 236 YWPTDPVDLNASCSLSDSTPLEDFSVISP----PLQQNTRNGMRQEASNAFPSMISVAEN 291
W +AS SLS S P ++ ++ P + G R ++AFPS S E
Sbjct: 209 AWNEGLAQYDASSSLSLSMPSQNSPNVNNQSGLPEPRFGLGGGRAVTASAFPSTRST-ET 267
Query: 292 VERPLRNFDRRITRLQHQESGPLNLTSTGSGILHNHSSAHQIPGSLLFNDSLELRLTAGA 351
+ RP RR+ Q ES + T +GS + Q+P + F D L+ R
Sbjct: 268 ISRP----GRRLNPGQPPESVAFSFTQSGSSVRQQ----QQLPATSPFVDPLDARAIPVT 319
Query: 352 TAANSGAVQNQTPALHMHPTPWNXXXXXXXXXXXXXXXXXXXXXXEDLNLRIFPR-DSTD 410
+++SG Q +H+ P E L+ PR +S
Sbjct: 320 GSSSSG--DGQPSMIHL---PALTRNIHQFAWSASSSSRANSMPEEGLSPWDAPRINSEQ 374
Query: 411 HFMNVPASSGLEPMG----WHASSSNVNNAGGIPPTSWTGSSLNVHSL-PNPNWTFNHDV 465
PA+ P+ W + N + +G P GSS +H L PNP W H
Sbjct: 375 PVFTTPANETRNPVQDQFCWSFTRGNPSTSGDSPFVPRAGSSSGIHGLQPNPTWVTPH-- 432
Query: 466 PAENLQRVSELSPWSLFPSISSAPXXXXXXX-------XXXXXXXXXXXXXXXXXNNQPY 518
N R+SE++PWSLFPSI S +
Sbjct: 433 ---NQSRISEVAPWSLFPSIESESATHGASLPLLPTGPSVSSNEAAAPSGSSSRSHRSRQ 489
Query: 519 RRTAFSMERRGGDVLSGPHSLRALAFDSEGRRRLISEIRQVLTAMRRGENLRAEDYMVFD 578
RR+ +ER+ D L H R+LA D++GR RLISEIRQVL+AMRRGENLR EDYMVFD
Sbjct: 490 RRSGLLLERQ-NDHLHLRHLGRSLAADNDGRNRLISEIRQVLSAMRRGENLRFEDYMVFD 548
Query: 579 PFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISF 638
P +Y G+AEMHDRHR+MRLDVDNMSYEELLAL E+IGDVSTGLSE+ I K+MKQ + S
Sbjct: 549 PLIYQGMAEMHDRHRDMRLDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSS 608
Query: 639 MAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTALAT 696
A S D EPCC+CQE+YA G+ +G+L CGHEFHT C+KQWL+ KNLCPICKT AL+T
Sbjct: 609 AAGSHQDMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKTVALST 666
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 259/737 (35%), Positives = 348/737 (47%), Gaps = 95/737 (12%)
Query: 18 MQGP---GSSGTDMN---------NQSSLNHVQNAVDFRLSNYRGSTGETAHLRGTGPNV 65
MQGP G S T++N ++SLN + N D N +G + +
Sbjct: 4 MQGPRSIGGSSTEVNQVDGESIYCTETSLNTMLNPADTGFPNNSTPSGRPTYASSSSHAA 63
Query: 66 S-FSGWNNGESSSGLNLINQVNDEGLKSEHGMSSLCGTTADNGLRPEERQLHVNQSRIHH 124
+ W GESSS +QVN G+K+ H + GT G E RQ +N +
Sbjct: 64 QDHTWWRFGESSSIPGPSDQVNSIGIKTSHQLPQ-DGTHHFVGYGSEGRQTGLNGMMVDG 122
Query: 125 ------------SFLQGSSSNHISQNISLDMGHIPNTADRGKGIETSSAA--HDCNPCEL 170
SFL+GSSSN + Q++ + M + + +TS H+ L
Sbjct: 123 GVHAGSHIRNVPSFLRGSSSNPMPQHVDMSMDMDSDNCN----AQTSGVVIRHNSYGSSL 178
Query: 171 GREKAPFGIASYNHIGASSESPGYMAWGDSASSWGPSCKRKALEGSSGHLCTEGSSSSLV 230
G +S G SS P G WG SCKRKALEGS H + + + +V
Sbjct: 179 G--------SSVQAAGESSSGPASPFGG-----WGSSCKRKALEGSPSHYFSGETPNRIV 225
Query: 231 QTENGYWPTDPVDLNASCSLSDSTPLEDFSVISPPL----QQNTRNGMRQEASNAFPSMI 286
QTEN AS SLS +TP + ++ Q G R A++AF S
Sbjct: 226 QTENSASHASLSQYGASSSLSLATPSQSSPNVTNHFGRTEQMFGSGGGRAVAASAFHS-- 283
Query: 287 SVAENVERPLRNFDRRITRLQHQESGPLNLTSTGSGILHNHSSAHQIPGSLLFNDSLELR 346
N + L RR+ Q QES +++ G+ + S +P + F D ++R
Sbjct: 284 --TRNTDT-LSRAGRRLNPRQPQESVAFSVSHGGTSVRPTGSLQQNLPLNSPFVDPPDVR 340
Query: 347 LTAGATAANSGAVQNQTPALHM-------HPTPWNXXXXXXXXXXXXXXXXXXXXXXEDL 399
++ + +N+G +NQT +H+ H W+ E L
Sbjct: 341 SSSITSGSNTG--ENQTNIVHLPALTRNIHQYAWDASFSSRASNPSGIGMPA-----ERL 393
Query: 400 NLRI-FPRDSTDHFMNVPASSGLEPMG--WHASSSNVNNAGGIPPTSW-------TGSSL 449
+ PR + + + PA+ +P+ W N A G P +S G S
Sbjct: 394 GPQWETPRSNQEQPLFAPATDMRQPVHDLW-------NFARGSPGSSVDSLFVPRAGPSS 446
Query: 450 NVHS-LPNPNWTFNHDVPAENLQRVSELSPWSLFPSISS------APXXXXXXXXXXXXX 502
+H+ PNP W + P N R SELSPWSLFPSI S P
Sbjct: 447 AIHTPQPNPTWIPPQNAPPHNPSRTSELSPWSLFPSIESPSASHGGPLPLLPAGPSVSSN 506
Query: 503 XXXXXXXXXXXNNQPYRRTAFSMERRGGDVLSGPHSLRALAFDSEGRRRLISEIRQVLTA 562
+++ R + + R ++L H R+LA D GR ++ISEIRQVL A
Sbjct: 507 EVTMPSSSNSRSHRSRHRRSGLLLERQNELLHLRHIGRSLAADGNGRNQIISEIRQVLHA 566
Query: 563 MRRGENLRAEDYMVFDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLS 622
MRRGENLR EDYMVFDP +Y G+ +MHDRHREMRLDVDNMSYEELLAL E+IGDVSTGLS
Sbjct: 567 MRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLS 626
Query: 623 EDNIHKLMKQRLYIS---FMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQW 679
E+ I K MKQ + S E + EPCCICQE+Y G+ +G+L CGHEFH CIKQW
Sbjct: 627 EEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQW 686
Query: 680 LVQKNLCPICKTTALAT 696
++ KNLCPICKT AL T
Sbjct: 687 VMIKNLCPICKTEALKT 703
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 259/737 (35%), Positives = 348/737 (47%), Gaps = 95/737 (12%)
Query: 18 MQGP---GSSGTDMN---------NQSSLNHVQNAVDFRLSNYRGSTGETAHLRGTGPNV 65
MQGP G S T++N ++SLN + N D N +G + +
Sbjct: 4 MQGPRSIGGSSTEVNQVDGESIYCTETSLNTMLNPADTGFPNNSTPSGRPTYASSSSHAA 63
Query: 66 S-FSGWNNGESSSGLNLINQVNDEGLKSEHGMSSLCGTTADNGLRPEERQLHVNQSRIHH 124
+ W GESSS +QVN G+K+ H + GT G E RQ +N +
Sbjct: 64 QDHTWWRFGESSSIPGPSDQVNSIGIKTSHQLPQ-DGTHHFVGYGSEGRQTGLNGMMVDG 122
Query: 125 ------------SFLQGSSSNHISQNISLDMGHIPNTADRGKGIETSSAA--HDCNPCEL 170
SFL+GSSSN + Q++ + M + + +TS H+ L
Sbjct: 123 GVHAGSHIRNVPSFLRGSSSNPMPQHVDMSMDMDSDNCN----AQTSGVVIRHNSYGSSL 178
Query: 171 GREKAPFGIASYNHIGASSESPGYMAWGDSASSWGPSCKRKALEGSSGHLCTEGSSSSLV 230
G +S G SS P G WG SCKRKALEGS H + + + +V
Sbjct: 179 G--------SSVQAAGESSSGPASPFGG-----WGSSCKRKALEGSPSHYFSGETPNRIV 225
Query: 231 QTENGYWPTDPVDLNASCSLSDSTPLEDFSVISPPL----QQNTRNGMRQEASNAFPSMI 286
QTEN AS SLS +TP + ++ Q G R A++AF S
Sbjct: 226 QTENSASHASLSQYGASSSLSLATPSQSSPNVTNHFGRTEQMFGSGGGRAVAASAFHS-- 283
Query: 287 SVAENVERPLRNFDRRITRLQHQESGPLNLTSTGSGILHNHSSAHQIPGSLLFNDSLELR 346
N + L RR+ Q QES +++ G+ + S +P + F D ++R
Sbjct: 284 --TRNTDT-LSRAGRRLNPRQPQESVAFSVSHGGTSVRPTGSLQQNLPLNSPFVDPPDVR 340
Query: 347 LTAGATAANSGAVQNQTPALHM-------HPTPWNXXXXXXXXXXXXXXXXXXXXXXEDL 399
++ + +N+G +NQT +H+ H W+ E L
Sbjct: 341 SSSITSGSNTG--ENQTNIVHLPALTRNIHQYAWDASFSSRASNPSGIGMPA-----ERL 393
Query: 400 NLRI-FPRDSTDHFMNVPASSGLEPMG--WHASSSNVNNAGGIPPTSW-------TGSSL 449
+ PR + + + PA+ +P+ W N A G P +S G S
Sbjct: 394 GPQWETPRSNQEQPLFAPATDMRQPVHDLW-------NFARGSPGSSVDSLFVPRAGPSS 446
Query: 450 NVHS-LPNPNWTFNHDVPAENLQRVSELSPWSLFPSISS------APXXXXXXXXXXXXX 502
+H+ PNP W + P N R SELSPWSLFPSI S P
Sbjct: 447 AIHTPQPNPTWIPPQNAPPHNPSRTSELSPWSLFPSIESPSASHGGPLPLLPAGPSVSSN 506
Query: 503 XXXXXXXXXXXNNQPYRRTAFSMERRGGDVLSGPHSLRALAFDSEGRRRLISEIRQVLTA 562
+++ R + + R ++L H R+LA D GR ++ISEIRQVL A
Sbjct: 507 EVTMPSSSNSRSHRSRHRRSGLLLERQNELLHLRHIGRSLAADGNGRNQIISEIRQVLHA 566
Query: 563 MRRGENLRAEDYMVFDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLS 622
MRRGENLR EDYMVFDP +Y G+ +MHDRHREMRLDVDNMSYEELLAL E+IGDVSTGLS
Sbjct: 567 MRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLS 626
Query: 623 EDNIHKLMKQRLYIS---FMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQW 679
E+ I K MKQ + S E + EPCCICQE+Y G+ +G+L CGHEFH CIKQW
Sbjct: 627 EEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQW 686
Query: 680 LVQKNLCPICKTTALAT 696
++ KNLCPICKT AL T
Sbjct: 687 VMIKNLCPICKTEALKT 703
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 259/737 (35%), Positives = 348/737 (47%), Gaps = 95/737 (12%)
Query: 18 MQGP---GSSGTDMN---------NQSSLNHVQNAVDFRLSNYRGSTGETAHLRGTGPNV 65
MQGP G S T++N ++SLN + N D N +G + +
Sbjct: 4 MQGPRSIGGSSTEVNQVDGESIYCTETSLNTMLNPADTGFPNNSTPSGRPTYASSSSHAA 63
Query: 66 S-FSGWNNGESSSGLNLINQVNDEGLKSEHGMSSLCGTTADNGLRPEERQLHVNQSRIHH 124
+ W GESSS +QVN G+K+ H + GT G E RQ +N +
Sbjct: 64 QDHTWWRFGESSSIPGPSDQVNSIGIKTSHQLPQ-DGTHHFVGYGSEGRQTGLNGMMVDG 122
Query: 125 ------------SFLQGSSSNHISQNISLDMGHIPNTADRGKGIETSSAA--HDCNPCEL 170
SFL+GSSSN + Q++ + M + + +TS H+ L
Sbjct: 123 GVHAGSHIRNVPSFLRGSSSNPMPQHVDMSMDMDSDNCN----AQTSGVVIRHNSYGSSL 178
Query: 171 GREKAPFGIASYNHIGASSESPGYMAWGDSASSWGPSCKRKALEGSSGHLCTEGSSSSLV 230
G +S G SS P G WG SCKRKALEGS H + + + +V
Sbjct: 179 G--------SSVQAAGESSSGPASPFGG-----WGSSCKRKALEGSPSHYFSGETPNRIV 225
Query: 231 QTENGYWPTDPVDLNASCSLSDSTPLEDFSVISPPL----QQNTRNGMRQEASNAFPSMI 286
QTEN AS SLS +TP + ++ Q G R A++AF S
Sbjct: 226 QTENSASHASLSQYGASSSLSLATPSQSSPNVTNHFGRTEQMFGSGGGRAVAASAFHS-- 283
Query: 287 SVAENVERPLRNFDRRITRLQHQESGPLNLTSTGSGILHNHSSAHQIPGSLLFNDSLELR 346
N + L RR+ Q QES +++ G+ + S +P + F D ++R
Sbjct: 284 --TRNTDT-LSRAGRRLNPRQPQESVAFSVSHGGTSVRPTGSLQQNLPLNSPFVDPPDVR 340
Query: 347 LTAGATAANSGAVQNQTPALHM-------HPTPWNXXXXXXXXXXXXXXXXXXXXXXEDL 399
++ + +N+G +NQT +H+ H W+ E L
Sbjct: 341 SSSITSGSNTG--ENQTNIVHLPALTRNIHQYAWDASFSSRASNPSGIGMPA-----ERL 393
Query: 400 NLRI-FPRDSTDHFMNVPASSGLEPMG--WHASSSNVNNAGGIPPTSW-------TGSSL 449
+ PR + + + PA+ +P+ W N A G P +S G S
Sbjct: 394 GPQWETPRSNQEQPLFAPATDMRQPVHDLW-------NFARGSPGSSVDSLFVPRAGPSS 446
Query: 450 NVHS-LPNPNWTFNHDVPAENLQRVSELSPWSLFPSISS------APXXXXXXXXXXXXX 502
+H+ PNP W + P N R SELSPWSLFPSI S P
Sbjct: 447 AIHTPQPNPTWIPPQNAPPHNPSRTSELSPWSLFPSIESPSASHGGPLPLLPAGPSVSSN 506
Query: 503 XXXXXXXXXXXNNQPYRRTAFSMERRGGDVLSGPHSLRALAFDSEGRRRLISEIRQVLTA 562
+++ R + + R ++L H R+LA D GR ++ISEIRQVL A
Sbjct: 507 EVTMPSSSNSRSHRSRHRRSGLLLERQNELLHLRHIGRSLAADGNGRNQIISEIRQVLHA 566
Query: 563 MRRGENLRAEDYMVFDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLS 622
MRRGENLR EDYMVFDP +Y G+ +MHDRHREMRLDVDNMSYEELLAL E+IGDVSTGLS
Sbjct: 567 MRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLS 626
Query: 623 EDNIHKLMKQRLYIS---FMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQW 679
E+ I K MKQ + S E + EPCCICQE+Y G+ +G+L CGHEFH CIKQW
Sbjct: 627 EEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQW 686
Query: 680 LVQKNLCPICKTTALAT 696
++ KNLCPICKT AL T
Sbjct: 687 VMIKNLCPICKTEALKT 703
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 253/731 (34%), Positives = 343/731 (46%), Gaps = 95/731 (12%)
Query: 18 MQGP---GSSGTDMN---------NQSSLNHVQNAVDFRLSNYRGSTGETAHLRGTGPNV 65
MQGP G S T++N ++SLN + N D N +G + +
Sbjct: 4 MQGPRSIGGSSTEVNQVDGESIYCTETSLNTMLNPADTGFPNNSTPSGRPTYASSSSHAA 63
Query: 66 S-FSGWNNGESSSGLNLINQVNDEGLKSEHGMSSLCGTTADNGLRPEERQLHVNQSRIHH 124
+ W GESSS +QVN G+K+ H + GT G E RQ +N +
Sbjct: 64 QDHTWWRFGESSSIPGPSDQVNSIGIKTSHQLPQ-DGTHHFVGYGSEGRQTGLNGMMVDG 122
Query: 125 ------------SFLQGSSSNHISQNISLDMGHIPNTADRGKGIETSSAA--HDCNPCEL 170
SFL+GSSSN + Q++ + M + + +TS H+ L
Sbjct: 123 GVHAGSHIRNVPSFLRGSSSNPMPQHVDMSMDMDSDNCN----AQTSGVVIRHNSYGSSL 178
Query: 171 GREKAPFGIASYNHIGASSESPGYMAWGDSASSWGPSCKRKALEGSSGHLCTEGSSSSLV 230
G +S G SS P G WG SCKRKALEGS H + + + +V
Sbjct: 179 G--------SSVQAAGESSSGPASPFGG-----WGSSCKRKALEGSPSHYFSGETPNRIV 225
Query: 231 QTENGYWPTDPVDLNASCSLSDSTPLEDFSVISPPL----QQNTRNGMRQEASNAFPSMI 286
QTEN AS SLS +TP + ++ Q G R A++AF S
Sbjct: 226 QTENSASHASLSQYGASSSLSLATPSQSSPNVTNHFGRTEQMFGSGGGRAVAASAFHS-- 283
Query: 287 SVAENVERPLRNFDRRITRLQHQESGPLNLTSTGSGILHNHSSAHQIPGSLLFNDSLELR 346
N + L RR+ Q QES +++ G+ + S +P + F D ++R
Sbjct: 284 --TRNTDT-LSRAGRRLNPRQPQESVAFSVSHGGTSVRPTGSLQQNLPLNSPFVDPPDVR 340
Query: 347 LTAGATAANSGAVQNQTPALHM-------HPTPWNXXXXXXXXXXXXXXXXXXXXXXEDL 399
++ + +N+G +NQT +H+ H W+ E L
Sbjct: 341 SSSITSGSNTG--ENQTNIVHLPALTRNIHQYAWDASFSSRASNPSGIGMPA-----ERL 393
Query: 400 NLRI-FPRDSTDHFMNVPASSGLEPMG--WHASSSNVNNAGGIPPTSW-------TGSSL 449
+ PR + + + PA+ +P+ W N A G P +S G S
Sbjct: 394 GPQWETPRSNQEQPLFAPATDMRQPVHDLW-------NFARGSPGSSVDSLFVPRAGPSS 446
Query: 450 NVHS-LPNPNWTFNHDVPAENLQRVSELSPWSLFPSISS------APXXXXXXXXXXXXX 502
+H+ PNP W + P N R SELSPWSLFPSI S P
Sbjct: 447 AIHTPQPNPTWIPPQNAPPHNPSRTSELSPWSLFPSIESPSASHGGPLPLLPAGPSVSSN 506
Query: 503 XXXXXXXXXXXNNQPYRRTAFSMERRGGDVLSGPHSLRALAFDSEGRRRLISEIRQVLTA 562
+++ R + + R ++L H R+LA D GR ++ISEIRQVL A
Sbjct: 507 EVTMPSSSNSRSHRSRHRRSGLLLERQNELLHLRHIGRSLAADGNGRNQIISEIRQVLHA 566
Query: 563 MRRGENLRAEDYMVFDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLS 622
MRRGENLR EDYMVFDP +Y G+ +MHDRHREMRLDVDNMSYEELLAL E+IGDVSTGLS
Sbjct: 567 MRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLS 626
Query: 623 EDNIHKLMKQRLYIS---FMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQW 679
E+ I K MKQ + S E + EPCCICQE+Y G+ +G+L CGHEFH CIKQW
Sbjct: 627 EEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQW 686
Query: 680 LVQKNLCPICK 690
++ KNLCPI +
Sbjct: 687 VMIKNLCPIFR 697
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 131/186 (70%), Gaps = 5/186 (2%)
Query: 515 NQPYRRTAFSMERRGGDVLSGPHSLRALAFDSEGRRRL-ISEIRQVLTAMRR---GENLR 570
N+ Y R +R+G V+ PH LRALA S GR RL +S+++ VL MRR NLR
Sbjct: 500 NRAYSRAGPLFDRQGDSVVGIPHPLRALAAASRGRSRLMVSQMQNVLDVMRRDANNNNLR 559
Query: 571 AEDYMVFDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLM 630
ED M+ + + A HDR+R+MRLDVDNMSYEELLALEE+IGDV TG++E+ I +
Sbjct: 560 LEDVMLLNHSVLFDGATGHDRYRDMRLDVDNMSYEELLALEERIGDVCTGVNEETISNRL 619
Query: 631 KQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
KQR Y S +S D EPCC+CQE+Y GE +G+L+CGHEFH++CIK+WL QKNLCPICK
Sbjct: 620 KQRKYKS-NTKSPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICK 678
Query: 691 TTALAT 696
TT L T
Sbjct: 679 TTGLNT 684
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 205/708 (28%), Positives = 311/708 (43%), Gaps = 81/708 (11%)
Query: 1 MQGQRRTAGSFPAIVSMMQGPGSSGTDMNNQSSLNHVQNAVDFRLSNYRGSTGETAHLRG 60
MQG+R + GS ++ +G SS ++ Q ++ N D L +Y S +T
Sbjct: 1 MQGERASLGSLSKALNFERGSTSSNAVVDQQIRWENLHNYGDNDLQDYMSSAADT----- 55
Query: 61 TGPNVSFSGWNNGESSSGLNLINQVNDEGLKSEHGMSSLCGTTADNGLRPEERQLHVNQS 120
P + S ++ N I + + G K+E +SL G E+R + S
Sbjct: 56 -NPTFANSVYHEKRGLQRFN-IGEASSSGTKNEG--ASLTEQWKGIGRFEEQRNDKLELS 111
Query: 121 RIHHSFLQGSSSNHISQNISLDMGHIPNTADRGKGIETSSAAHDCNPC-------ELGRE 173
+ F+Q S+ + + ++++L+ A+ + +E D NP E+
Sbjct: 112 PL---FVQPSNGSRVVRDVNLN-------AEYNEHLE------DMNPVTVHPGHFEVNGL 155
Query: 174 KAPFGIASYNHIGASSESPGYMAWGDSASSWGPSCKRKALEGSSGHLCTEGSSSSLVQTE 233
++ F + N + A S G A SCKRKAL+ S G + G +
Sbjct: 156 RSEFLLD--NSVRAGSSVDGRRA----------SCKRKALDASGGQSSSTGGFREFQRGV 203
Query: 234 NGYWPTDPVDLNASCSLSDSTPLEDFSVISPPLQQNTRNGMRQEASNAFPSMISVAENVE 293
+ W + P + + + +D L + +G R S+A P++ S E
Sbjct: 204 SSSWISGPTYYSPAMTAND-------------LNISLDHGRRGLVSSAVPNL-SPPTITE 249
Query: 294 RPLRNFDRRITRLQHQESGPLNLTSTGSGILHNHSSAHQIPGSLLFNDSLELRLTAGATA 353
RN+ + QE+ + N + + PG L+ D ++ + G
Sbjct: 250 SSSRNYPVWVNPTYQQET------------VSNFAPSLNSPG-LIPADHQQISMRYGHAL 296
Query: 354 ANSGAVQNQTPALHMHPTPWNXXXXXXXXXXXXXXXXXXXXXXEDLNLRIFPRDSTDHF- 412
N + PA HM P N ++ R R ++
Sbjct: 297 GNFASQNPNAPATHMPPVSRNTFQWNTSPVAAVISSSSATPVDRNVIHRNATRQRSNTLE 356
Query: 413 --MNVPASSGLEPMGWHASSSNVNNAGGIPPTSWTGSSLNVHSLPN-PNWTFNHDVPAEN 469
+ VPA H S NA G + + S +V P+ P T + N
Sbjct: 357 IPLFVPAPELRNVAHGHIS----RNASGARHVASSSSRTSVQPSPSSPALTPYQNNSLHN 412
Query: 470 LQRVSELSPWSLFPSISSAPXXXXXXXXXXXXXXXXXXXXXXXXNNQPYRRTAFSMERRG 529
+R+SE SL S+ + + R ++ + R+G
Sbjct: 413 QRRLSENFRRSLLSSLVTQQRAARSLAHPASPNEHVLQSGGDNTSQVHNRASSRAGPRQG 472
Query: 530 GDVLSGPHSLRALAFDSEGRRRL-ISEIRQVLTAMRRGENLRAEDYMVFDPFLYHGLAEM 588
D HSLR LA S GR R+ SEIR +L MRR NLR ED M+ + + G A++
Sbjct: 473 QDATGISHSLRGLASTSRGRTRMGASEIRNILEHMRRAGNLRLEDVMLLNQSIMLGAADI 532
Query: 589 HDRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEP 648
HDR+R+MRLDVDNM+YEELL+LEE+IGDV TGL+E+ I +KQ+ Y S SS + EP
Sbjct: 533 HDRYRDMRLDVDNMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYKS-STRSSQEVEP 591
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTALAT 696
CC+CQE+Y E IG L+CGH+FH++CIK+WL QKNLCPICKTT L T
Sbjct: 592 CCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICKTTGLNT 639
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 102/163 (62%), Gaps = 9/163 (5%)
Query: 540 RALAFDSEGRRRLISEIRQVLTAMRR---GENLRAEDYMVFDPFLY-HGLAEMHDRHREM 595
R+L RR ++ + +VL A+ R E L E V + L+ +G++ HD+HR+M
Sbjct: 350 RSLMNRDTFRRYNMNGVAEVLLALERIEQDEELTYEQLAVLETNLFLNGMSSFHDQHRDM 409
Query: 596 RLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLY-----ISFMAESSSDPEPCC 650
RLD+DNMSYEELLALEE++G VST LSE+ + K +K +Y + + D C
Sbjct: 410 RLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCS 469
Query: 651 ICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTA 693
ICQE+Y +G+ +G+L C H++H C +QWL KN CPICKT+A
Sbjct: 470 ICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSA 512
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 102/163 (62%), Gaps = 9/163 (5%)
Query: 540 RALAFDSEGRRRLISEIRQVLTAMRR---GENLRAEDYMVFDPFLY-HGLAEMHDRHREM 595
R+L RR ++ + +VL A+ R E L E V + L+ +G++ HD+HR+M
Sbjct: 350 RSLMNRDTFRRYNMNGVAEVLLALERIEQDEELTYEQLAVLETNLFLNGMSSFHDQHRDM 409
Query: 596 RLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLY-----ISFMAESSSDPEPCC 650
RLD+DNMSYEELLALEE++G VST LSE+ + K +K +Y + + D C
Sbjct: 410 RLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCS 469
Query: 651 ICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTA 693
ICQE+Y +G+ +G+L C H++H C +QWL KN CPICKT+A
Sbjct: 470 ICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSA 512
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 96/150 (64%), Gaps = 9/150 (6%)
Query: 553 ISEIRQVLTAMRRGENLRAEDYMVFDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEE 612
ISEI L + + L ED ++ + L G HD+HR+MRLD+DNMSYEELLALEE
Sbjct: 343 ISEILPELDRIEQDIELNYEDLLIMETGLLLGGLSFHDQHRDMRLDIDNMSYEELLALEE 402
Query: 613 QIGDVSTGLSEDNIHKLMKQRLY----ISF--MAESSSDPE---PCCICQEQYANGEIIG 663
+IG VST L+E+ I K +K +Y +S+ + +S SD + C ICQE+Y G+ +G
Sbjct: 403 RIGTVSTALTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDEVG 462
Query: 664 SLDCGHEFHTKCIKQWLVQKNLCPICKTTA 693
L C H +H KC+++WL K+ CPICK TA
Sbjct: 463 RLHCEHTYHVKCVQEWLRIKSWCPICKATA 492
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 82/114 (71%), Gaps = 8/114 (7%)
Query: 590 DRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLY--ISFMAESSS--- 644
D HR+MRLD++ MSYEELLAL E+IG V+TGL E+++ +K R I+F ESSS
Sbjct: 375 DHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRT 434
Query: 645 ---DPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTALA 695
+ EPC ICQE + N E I +LDCGHE+H +C+++WL+ KN+CPICK+ AL
Sbjct: 435 KDLETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEALV 488
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 82/114 (71%), Gaps = 8/114 (7%)
Query: 590 DRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLY--ISFMAESSS--- 644
D HR+MRLD++ MSYEELLAL E+IG V+TGL E+++ +K R I+F ESSS
Sbjct: 375 DHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRT 434
Query: 645 ---DPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTALA 695
+ EPC ICQE + N E I +LDCGHE+H +C+++WL+ KN+CPICK+ AL
Sbjct: 435 KDLETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEALV 488
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 12/150 (8%)
Query: 553 ISEIRQVLTAMRRGENLRAEDYMVFDPFLYH-GLAEMHDRHREMRLDVDNMSYEELLALE 611
I+E+ L + E L E + L+ G+ +D+HR+MRLD+DNMSYEELLAL
Sbjct: 373 IAEVLLALERIEHDEELTYEQLASIETNLFSSGMFRFYDQHRDMRLDIDNMSYEELLALG 432
Query: 612 EQIGDVSTGLSEDNIHKLMKQRLY--------ISFMAESSSDPEPCCICQEQYANGEIIG 663
+++G VST LSE+ + + +KQ +Y IS + D C ICQE+Y +G+ +G
Sbjct: 433 DKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKD---DDIKCSICQEEYVDGDELG 489
Query: 664 SLDCGHEFHTKCIKQWLVQKNLCPICKTTA 693
++ C H +H C++QWL KN CPICKT+A
Sbjct: 490 TIPCQHMYHVSCVQQWLRMKNWCPICKTSA 519
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 12/150 (8%)
Query: 553 ISEIRQVLTAMRRGENLRAEDYMVFDPFLYH-GLAEMHDRHREMRLDVDNMSYEELLALE 611
I+E+ L + E L E + L+ G+ +D+HR+MRLD+DNMSYEELLAL
Sbjct: 373 IAEVLLALERIEHDEELTYEQLASIETNLFSSGMFRFYDQHRDMRLDIDNMSYEELLALG 432
Query: 612 EQIGDVSTGLSEDNIHKLMKQRLY--------ISFMAESSSDPEPCCICQEQYANGEIIG 663
+++G VST LSE+ + + +KQ +Y IS + D C ICQE+Y +G+ +G
Sbjct: 433 DKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKD---DDIKCSICQEEYVDGDELG 489
Query: 664 SLDCGHEFHTKCIKQWLVQKNLCPICKTTA 693
++ C H +H C++QWL KN CPICKT+A
Sbjct: 490 TIPCQHMYHVSCVQQWLRMKNWCPICKTSA 519
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 4/110 (3%)
Query: 590 DRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAES--SSDPE 647
D H++MRLD+++MSYEELLAL +QIG V TGLS +++ +L+K+R E S+D E
Sbjct: 365 DHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLE 424
Query: 648 P--CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTALA 695
C ICQE Y N + I +LDC H++H +C+K+WLV KN+CPICK+ AL
Sbjct: 425 TDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEALV 474
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 4/110 (3%)
Query: 590 DRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAES--SSDPE 647
D H++MRLD+++MSYEELLAL +QIG V TGLS +++ +L+K+R E S+D E
Sbjct: 365 DHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLE 424
Query: 648 P--CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTALA 695
C ICQE Y N + I +LDC H++H +C+K+WLV KN+CPICK+ AL
Sbjct: 425 TDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEALV 474
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 571 AEDYMVFDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLM 630
AE M+ + F+ G+ D+ R+MRL+VDNM+YE+LL L E+IG V+TGL+E I +
Sbjct: 243 AEMMMMQNGFVMGGVLSSFDQFRDMRLNVDNMTYEQLLELGERIGHVNTGLTEKQIKSCL 302
Query: 631 KQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
++ +++ C ICQ++Y + +G L CGH FH C+ QWLV+KN CP+CK
Sbjct: 303 RK--VKPCRQDTTVADRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCK 360
Query: 691 TTA 693
T A
Sbjct: 361 TMA 363
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Query: 545 DSEGRRRLISEIRQV-LTAMRRGENLRAEDYMVFD-PFLYHGLAEMHDRHREMRLDVDNM 602
D GRRR E Q + E +E++MV D Y+G M D HR+MRLD+DNM
Sbjct: 388 DRPGRRRSSYERFQPPFDEVALHERFSSEEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNM 447
Query: 603 SYEELLALEEQIGDVSTGLSEDNIHK-LMKQRLYISFMAESSSDPEPCCICQEQYANGEI 661
SYEELL L E+IG V+TGLS+ I L+ Y S+ E + C IC E+Y E
Sbjct: 448 SYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTE---EQRKCAICLEEYKEKEE 504
Query: 662 IGSLD-CGHEFHTKCIKQWLVQKNLCPICKTTAL 694
+G + CGH++H +CIK+WL KN CPICK+ AL
Sbjct: 505 LGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 538
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Query: 545 DSEGRRRLISEIRQV-LTAMRRGENLRAEDYMVFD-PFLYHGLAEMHDRHREMRLDVDNM 602
D GRRR E Q + E +E++MV D Y+G M D HR+MRLD+DNM
Sbjct: 388 DRPGRRRSSYERFQPPFDEVALHERFSSEEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNM 447
Query: 603 SYEELLALEEQIGDVSTGLSEDNIHK-LMKQRLYISFMAESSSDPEPCCICQEQYANGEI 661
SYEELL L E+IG V+TGLS+ I L+ Y S+ E + C IC E+Y E
Sbjct: 448 SYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTE---EQRKCAICLEEYKEKEE 504
Query: 662 IGSLD-CGHEFHTKCIKQWLVQKNLCPICKTTAL 694
+G + CGH++H +CIK+WL KN CPICK+ AL
Sbjct: 505 LGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 538
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Query: 545 DSEGRRRLISEIRQV-LTAMRRGENLRAEDYMVFD-PFLYHGLAEMHDRHREMRLDVDNM 602
D GRRR E Q + E +E++MV D Y+G M D HR+MRLD+DNM
Sbjct: 441 DRPGRRRSSYERFQPPFDEVALHERFSSEEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNM 500
Query: 603 SYEELLALEEQIGDVSTGLSEDNIHK-LMKQRLYISFMAESSSDPEPCCICQEQYANGEI 661
SYEELL L E+IG V+TGLS+ I L+ Y S+ E + C IC E+Y E
Sbjct: 501 SYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTE---EQRKCAICLEEYKEKEE 557
Query: 662 IGSLD-CGHEFHTKCIKQWLVQKNLCPICKTTAL 694
+G + CGH++H +CIK+WL KN CPICK+ AL
Sbjct: 558 LGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 591
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 571 AEDYMVFDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLM 630
E M+ + F+ + + D + E+RLDVD+MSYE+LL L ++IG V+TGL E IH+ +
Sbjct: 245 TEMRMLQNGFVMGRITDSRDNYHELRLDVDSMSYEQLLELGDRIGYVNTGLKESEIHRCL 304
Query: 631 KQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
+ I + C ICQ++Y + +G L+CGH FH C+KQWL +KN CP+CK
Sbjct: 305 GK---IKPSVSHTLVDRKCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCK 361
Query: 691 TTA 693
A
Sbjct: 362 KAA 364
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 600 DNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEP--CCICQEQYA 657
D +YEELL++ ++ GD TGLSE+ I + + +R Y E SD E C ICQ++
Sbjct: 181 DIFTYEELLSITDETGDERTGLSEEVIDENLIRRKY-----EKRSDDETKRCVICQQKLK 235
Query: 658 NGEIIGSLDCGHEFHTKCIKQWLVQKNLCPIC 689
+ E + L CGH+FH CIK WL+ N CP+C
Sbjct: 236 DNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLC 267
>AT1G36950.1 | Symbols: | RING/U-box superfamily protein |
chr1:14009673-14010822 REVERSE LENGTH=226
Length = 226
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 590 DRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEPC 649
D ++E+R+D D+M+YE+LL L +G ++ + NI + + F +S +D + C
Sbjct: 24 DPYQELRMDTDHMTYEQLLQLCNSMGYENSSVKASNIDRCFRNTKPSEF--QSLAD-KIC 80
Query: 650 CICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTA 693
CICQ+++ +G L+CGH FH +K W++ K CP+C+ TA
Sbjct: 81 CICQDRFQRRAGVGKLNCGHNFHINSVKPWILTKKQCPVCQKTA 124
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 598 DVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRL-------YISFMAES-SSDPEPC 649
D +NM+YEEL L + +GDV GLS++ I +L + Y M + +D C
Sbjct: 175 DPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQC 234
Query: 650 CICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
IC +YA G+ I +L C H +H CI QWL Q +C ICK
Sbjct: 235 SICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICK 275
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 597 LDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQY 656
+D D M+YEEL+ L E +G S GLS++ I L ++ + E C ICQ +Y
Sbjct: 145 IDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKY 204
Query: 657 ANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTALA 695
GE +L C H +H++CI +WL +CP+C +
Sbjct: 205 KIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEVFG 243
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 597 LDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQY 656
+D D M+YEEL+ L E +G S GLS++ I L ++ + E C ICQ +Y
Sbjct: 145 IDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKY 204
Query: 657 ANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTALA 695
GE +L C H +H++CI +WL +CP+C +
Sbjct: 205 KIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEVFG 243
>AT4G00070.1 | Symbols: | RING/U-box superfamily protein |
chr4:29672-31426 REVERSE LENGTH=179
Length = 179
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 584 GLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESS 643
GL D ++E+R+D D+M+YE+LL L +G ++G+ NI + ++ F +S
Sbjct: 82 GLRMDTDPYQELRMDTDHMTYEQLLQLCNNMGYENSGVKASNIDRCLRNTKPSEF--QSL 139
Query: 644 SDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQK 683
+D + CCICQ+ + +G L+CGH FH C+K W++ K
Sbjct: 140 AD-KICCICQDGFQKRAGVGKLNCGHNFHVNCVKPWILTK 178
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 596 RLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQ 655
+D D +SYEELLAL + +G S GLS D I L +R Y ++ ++ E C IC+
Sbjct: 237 EMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKR-YKEGDNQNGTN-ESCVICRLD 294
Query: 656 YANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPIC 689
Y + E + L C H +H++CI WL +CP+C
Sbjct: 295 YEDDEDLILLPCKHSYHSECINNWLKINKVCPVC 328
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 641 ESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
+S+SD C IC E++ GEI+ +L CGHEF CI +W ++ ++CP+C+
Sbjct: 150 KSNSDASVCTICLEEFEKGEIVVTLPCGHEFDDGCIGKWFLKDHVCPLCR 199
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 600 DNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANG 659
D +SYEEL+AL + IG + GL+ I + Y+ + + ++ + C +CQ ++
Sbjct: 115 DQLSYEELIALGDFIGVENRGLTPIEISTCLNASTYV--FSHNKNEIDRCVVCQMEFEER 172
Query: 660 EIIGSLD-CGHEFHTKCIKQWLVQKNLCPIC 689
E + L C H +H++CI +WL K +CPIC
Sbjct: 173 ESLVVLRPCDHPYHSECITKWLETKKICPIC 203
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 607 LLALEEQIGDVSTGLSEDNIHKL--MKQRLY--ISFMAESSSDPEPCCICQEQYANGEII 662
L +G G S+D I L K +L S +++++DPE CCIC +Y E +
Sbjct: 244 FLGYNMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPE-CCICLAKYKEKEEV 302
Query: 663 GSLDCGHEFHTKCIKQWLVQKNLCPICK 690
L C H FH KC+ QWL + CP+CK
Sbjct: 303 RKLPCSHRFHLKCVDQWLRIISCCPLCK 330
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 607 LLALEEQIGDVSTGLSEDNIHKL--MKQRLY--ISFMAESSSDPEPCCICQEQYANGEII 662
L +G G S+D I L K +L S +++++DPE CCIC +Y E +
Sbjct: 244 FLGYNMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPE-CCICLAKYKEKEEV 302
Query: 663 GSLDCGHEFHTKCIKQWLVQKNLCPICK 690
L C H FH KC+ QWL + CP+CK
Sbjct: 303 RKLPCSHRFHLKCVDQWLRIISCCPLCK 330
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 643 SSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
+ DPE CCIC +Y + E + L C H+FH+KC+ QWL + CP+CK
Sbjct: 292 TDDPE-CCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 643 SSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
+ DPE CCIC +Y + E + L C H+FH+KC+ QWL + CP+CK
Sbjct: 292 TDDPE-CCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 641 ESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTA 693
+ + D C +C EQ GEI+ +L C H+FH CI WL Q+ CP+CK A
Sbjct: 203 KGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFRA 255
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQ-KNLCPICKTTA 693
CCIC E Y G+ + L C H+FH C+ WL Q K+ CP+CK A
Sbjct: 234 CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDA 279
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 624 DNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWL--V 681
+++ L+ +LY +E DP C IC +Y + I +L C HEFH C+ +WL +
Sbjct: 468 NDVVDLLPIKLYTKSQSE---DPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEI 524
Query: 682 QKNLCPICK 690
+CP+C+
Sbjct: 525 HSRVCPLCR 533
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 595 MRLDVDNMSYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQE 654
M D YE LLAL+E G S + I+ L + + E+ C IC E
Sbjct: 542 MDRDFTEDDYELLLALDEN-NHRHGGASANRINNLPESTVQTDNFQET------CVICLE 594
Query: 655 QYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTA 693
G+ I L C H+FH CI WL + CP+CK++
Sbjct: 595 TPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCKSSV 633
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 600 DNMSYEELL----ALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQ 655
+ +S+EEL AL+++ G L+ N + +K R DP C +CQ+Q
Sbjct: 74 EQLSFEELFNRLPALQDRRGPPPASLAAINSLQKIKIR-----QKHLGLDPY-CPVCQDQ 127
Query: 656 YANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
+ G + C H +H++CI WLVQ+N CP+C+
Sbjct: 128 FEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCR 162
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 588 MHDRHREMRLDVDNMSYEELLALEEQIGDV-STGLSEDNIHKLMKQRLYISFMAESSSDP 646
++ H ++R + ++SYEE E+ G++ + GLS D++ KL YI
Sbjct: 122 INSHHWQLR--ISDVSYEER---EDVYGELEARGLSGDSLRKL---PCYIMSSEMVRRQV 173
Query: 647 EPCCICQEQYANGEIIGSL-DCGHEFHTKCIKQWLVQKNLCPICK 690
C IC + GEI SL C H FH C+ +WL++ CPIC+
Sbjct: 174 THCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICR 218
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 629 LMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPI 688
+ + L F AE+ CCIC+E G+ + L C H FH C+K WL + N CPI
Sbjct: 215 IFTEELLKKFGAEAE-----CCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPI 269
Query: 689 CK 690
C+
Sbjct: 270 CR 271
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
C IC E++ +G I +L CGHEF +C+ +W V+ ++CP+C+
Sbjct: 277 CTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLCR 318
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 624 DNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQ- 682
+++ L+ +LY +E DP C IC +Y + I +L C HEFH C+ +WL +
Sbjct: 468 NDVVDLLPIKLYTKSQSE---DPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEI 524
Query: 683 KNLCPICK 690
+CP+C+
Sbjct: 525 HRVCPLCR 532
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 643 SSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKT 691
S + CCIC +YAN E + L C H FH +C+ +WL CP+CK+
Sbjct: 357 SGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKS 405
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 620 GLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQW 679
GL++D I+ L +Q AE S+ C IC E + G+++ SL C H FH+ C+ W
Sbjct: 177 GLTQDAINCLHRQTFS---SAEVKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCLNPW 233
Query: 680 LVQKNLCPICK 690
L CP C+
Sbjct: 234 LRACGDCPCCR 244
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQ-KNLCPICKTTALAT 696
C IC E Y G+ + L C H+FH C+ WL+ + CP+CK A T
Sbjct: 232 CAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTT 280
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTAL 694
CCIC Y +G + +L C H FH+ CI +WL + CP+CK L
Sbjct: 307 CCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNIL 352
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 609 ALEEQIGDVSTGLSEDN--IHKLMKQRLYISFMAESSSDPEPCCICQEQYANGE-IIGSL 665
+E +I + T + N L+ +++ ++++ C IC E Y G I+ L
Sbjct: 141 VVEIKIWKIKTEFYKANKAAENLLIDSYCYNYLNVATTEENGCAICMEDYIEGSSIVAKL 200
Query: 666 DCGHEFHTKCIKQWLVQKNLCPICKTT 692
C HEFH CI +WL ++CP+C+++
Sbjct: 201 PCDHEFHGDCINKWLQLNHMCPLCRSS 227
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTAL 694
CCIC Y +G + SL C H FH+ CI +WL CP+CK L
Sbjct: 292 CCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNIL 337
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 639 MAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
+A S++ C IC+E+ + G + + C H FH KCI WL +KN CP C+
Sbjct: 204 VAASNAGEVECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCR 255
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
C IC ++++ G++ + C H+FH+KC+++WL + CP+C+
Sbjct: 109 CAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCR 150
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 627 HKLMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLC 686
+KL+ L +++S E C IC E++ +G + +L CGHEF +C+ W + C
Sbjct: 153 NKLVVNSLARKIYKKTTSSTERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETNHDC 212
Query: 687 PICK 690
P+C+
Sbjct: 213 PLCR 216
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 645 DPEPCCICQEQYANG---EIIGSLDCGHEFHTKCIKQWLVQKNLCPICKT 691
+ EPC IC E +G I + C H FH C+ +WL +KN CP+C+T
Sbjct: 18 ETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRT 67
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 639 MAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
+ E+ D C +C+E+ G+ + L C H++H++CI WL +N CP+C+
Sbjct: 362 VMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCR 413
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTAL 694
CCIC Y +G + L CGH FH C+ +WL CP+CK L
Sbjct: 353 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNIL 398
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 620 GLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSL-DCGHEFHTKCIKQ 678
GLS+ +I Q + + + C IC + + GE+ L CGH FH CI +
Sbjct: 147 GLSKSSI-----QNIPMFYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDE 201
Query: 679 WLVQKNLCPICK 690
WL+++ CPIC+
Sbjct: 202 WLLRQETCPICR 213
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 641 ESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTAL 694
E SS+ C IC+E+ + + L CGH FH C++ WL ++N CP C+ +
Sbjct: 284 ELSSNDATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCRALVV 334
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 626 IHKLMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQ-KN 684
+ K M ++ SF E ++ C IC E Y G+ + L C H+FH C+ WL +
Sbjct: 210 LVKAMPSLIFSSFH-EDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRT 268
Query: 685 LCPICKTTA 693
CP+CK A
Sbjct: 269 FCPVCKRDA 277
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 630 MKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQ-KNLCPI 688
M +Y + E S+ C IC + Y GEI+ L C H++H CI WL + ++ CP+
Sbjct: 98 MPTEVYTGVLEEGSTSVT-CAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPV 156
Query: 689 CK 690
CK
Sbjct: 157 CK 158
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 609 ALEEQIGD--------VSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGE 660
A+E Q D +S GL+ D+++++ K R+ ++S + C +C + + GE
Sbjct: 133 AVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRI-----TDTSPEIVSCSVCLQDFQVGE 187
Query: 661 IIGSL-DCGHEFHTKCIKQWLVQKNLCPICK 690
+ SL C H FH CI +WL + CP+C+
Sbjct: 188 TVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 641 ESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
E SS+ C IC+E+ + + L CGH FH C++ WL ++N CP C+
Sbjct: 213 ELSSNDATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCR 259
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
CCIC +Y + E + L C H FH C+ +WL CP+CK
Sbjct: 355 CCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 630 MKQRLYISFMAESSSDPEPCCICQEQYANG---EIIGSLDCGHEFHTKCIKQWLVQKNLC 686
MK + S E+ EPC IC E +G + + C H FH C+ +WL +KN C
Sbjct: 142 MKAEEFKSLKMET----EPCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTC 197
Query: 687 PICKT 691
P+C+T
Sbjct: 198 PLCRT 202
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTAL 694
CCIC Y +G + L CGH FH C+ +WL CP+CK L
Sbjct: 282 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNIL 327
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 609 ALEEQIGD--------VSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGE 660
A+E Q D +S GL+ D+++++ K R + ++S + C +C + + GE
Sbjct: 157 AVESQFQDHTDIFDTAISKGLTGDSLNRIPKVR-----ITDTSPEIVSCSVCLQDFQVGE 211
Query: 661 IIGSL-DCGHEFHTKCIKQWLVQKNLCPICK 690
+ SL C H FH CI +WL + CP+C+
Sbjct: 212 TVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 242
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 642 SSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
+SS E C IC E+++ G + +L CGH+F +C+ +W + CP+C+
Sbjct: 52 TSSTGEMCIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETNHSCPLCR 100
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 603 SYEELLALEEQIGDVSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGEII 662
++EEL ++ + G S GL+ D + K+ K ++ ++S + + C +C + + GE +
Sbjct: 147 TFEELSSIFDTGG--SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETV 204
Query: 663 GSL-DCGHEFHTKCIKQWLVQKNLCPICK 690
SL C H FH CI WL + CP+C+
Sbjct: 205 RSLPHCHHMFHLPCIDNWLFRHGSCPMCR 233
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 620 GLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSL-DCGHEFHTKCIKQ 678
GL ED I K LY A+ + C IC Y ++ L DC H FH KCI
Sbjct: 121 GLDEDTIQSYPK-ILYSE--AKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDT 177
Query: 679 WLVQKNLCPICKTTALAT 696
WL CP+C+T+ L T
Sbjct: 178 WLRLNPTCPVCRTSPLPT 195
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 620 GLSEDNIH---KLMKQRLYISFMAESSSDPEPCC-ICQEQYANGEIIGSL-DCGHEFHTK 674
GL+E+ I KL + +S+ + S CC IC Y ++I L DC H FH
Sbjct: 96 GLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDN 155
Query: 675 CIKQWLVQKNLCPICKTTAL 694
C+ WL CP+C+T+ L
Sbjct: 156 CVDPWLRLHPTCPVCRTSPL 175
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 645 DPEPCCICQEQYANGEIIGSLD-CGHEFHTKCIKQWLVQKNLCPICK 690
D C IC +A+GE I L CGH FH +CI +WLV ++ CP C+
Sbjct: 98 DSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 641 ESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTAL 694
E SS+ C IC+E+ + + L CGH FH C++ WL ++N CP C+ +
Sbjct: 105 ELSSNDATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCRALVV 155
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 577 FDPFLYHGLAEMHDRHREMRLDVDNMSYEELLALEEQIGDVST---------------GL 621
F FLY L ++ RL + + L A++ Q+G V T GL
Sbjct: 111 FGCFLY--LIDVIVSLLSGRLVRERIGPAMLSAVQSQMGAVDTAFDDHTSLFDTGGSKGL 168
Query: 622 SEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANGEIIGSL-DCGHEFHTKCIKQWL 680
+ D + K+ K + + ++S + + C +C + + GE + SL C H FH CI WL
Sbjct: 169 TGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWL 228
Query: 681 VQKNLCPICK 690
++ CP+C+
Sbjct: 229 LRHGSCPMCR 238
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 631 KQRLYISFMAESSSDPEPCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
K Y+ SS C IC +++ G + +L CGHEF KCI +W + CP+C+
Sbjct: 154 KSTRYMRKRETYSSGEYKCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYNCPLCR 213
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 641 ESSSDPE--PCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKTTAL 694
E S PE CCIC +Y +G + L C H FH CI +WL + CP+CK L
Sbjct: 328 ERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNIL 383
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
C IC+E+ A E + L C H +H +CI WL +N CP+C+
Sbjct: 97 CAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCR 138
>AT5G37200.1 | Symbols: | RING/U-box superfamily protein |
chr5:14727832-14728485 FORWARD LENGTH=217
Length = 217
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 617 VSTGLSEDNIHKLMKQRLYISFMAESSSDPEPCCICQEQYANG--EIIGSLDCGHEFHTK 674
+S G S + H+L++++ S A+ + E C IC E+++ +II DC H FH
Sbjct: 129 LSRGASGEVFHRLVEEQRVES--ADLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQG 186
Query: 675 CIKQWLVQKNLCPICK 690
C+ +WL +N CP+C+
Sbjct: 187 CLFEWLGLQNSCPLCR 202
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 648 PCCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICKT 691
PC IC+E + GE L C H +H CI WL N CP+C+
Sbjct: 95 PCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRV 138
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
C +C++++ G + C H +H+ CI WLVQ N CP+C+
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
C +C++++ G + C H +H+ CI WLVQ N CP+C+
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 649 CCICQEQYANGEIIGSLDCGHEFHTKCIKQWLVQKNLCPICK 690
C +C++++ G + C H +H+ CI WLVQ N CP+C+
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 49.3 bits (116), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 649 CCICQEQYANGEIIGSL-DCGHEFHTKCIKQWLVQKNLCPICKTT 692
C IC E+Y + I L +CGH FH CI WL QK CP C+ +
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRS 124