Miyakogusa Predicted Gene
- Lj4g3v0620070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0620070.1 Non Chatacterized Hit- tr|I1P156|I1P156_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,60.76,1e-17,RING/U-box,NULL; ARM repeat,Armadillo-type fold; no
description,Zinc finger, RING/FYVE/PHD-type; no ,CUFF.47650.1
(414 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 514 e-146
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 486 e-137
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 191 1e-48
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 185 5e-47
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 181 1e-45
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 155 6e-38
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 138 8e-33
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 138 8e-33
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 134 1e-31
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 134 2e-31
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 131 7e-31
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 127 1e-29
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 125 4e-29
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 124 2e-28
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 123 2e-28
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 122 4e-28
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 122 5e-28
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 120 1e-27
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 120 2e-27
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 112 3e-25
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 108 7e-24
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 105 4e-23
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 104 1e-22
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 96 6e-20
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 95 9e-20
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 95 1e-19
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 89 4e-18
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 86 6e-17
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 86 6e-17
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 84 1e-16
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 83 3e-16
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 83 4e-16
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 83 4e-16
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 82 6e-16
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 79 5e-15
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 78 1e-14
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 77 2e-14
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 76 5e-14
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 75 7e-14
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 1e-13
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 72 5e-13
AT5G11550.1 | Symbols: | ARM repeat superfamily protein | chr5:... 72 1e-12
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 71 1e-12
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 70 3e-12
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 69 8e-12
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 69 8e-12
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 69 8e-12
AT3G02840.1 | Symbols: | ARM repeat superfamily protein | chr3:... 66 4e-11
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 66 4e-11
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 66 5e-11
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 65 9e-11
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 65 1e-10
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 64 1e-10
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 64 3e-10
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 64 3e-10
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 62 5e-10
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 62 6e-10
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 62 6e-10
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 61 1e-09
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 61 1e-09
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 61 2e-09
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 61 2e-09
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 60 2e-09
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 59 6e-09
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 4e-08
AT1G56030.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 1e-07
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 54 2e-07
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 51 1e-06
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 51 2e-06
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 50 4e-06
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 49 6e-06
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 514 bits (1325), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/418 (62%), Positives = 319/418 (76%), Gaps = 9/418 (2%)
Query: 5 LEPLDLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGN-TTCPVTRAPLT 63
+EPLDLGIQIPYH+RCPISLELM+DPVTVCTGQTYDR+SIESWV+ GN TTCPVTRAPL+
Sbjct: 5 IEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLS 64
Query: 64 EFTLIPNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQ---ISSASASTHH 120
+FTLIPNHTLRRLIQEWCVANR+ GVERIPTPKQPA+P VR+LL+Q I+ S
Sbjct: 65 DFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 124
Query: 121 RLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRI-FDNRSSDELSHESLALLVMFPLAES 179
R +LRRLR ARDSD NR LIA+H+ I+++I F +S EL ESLALLVM P+ E
Sbjct: 125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEP 184
Query: 180 D-CAAIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDG 238
+ +I++D ++ +L+ LL S++ RVN+AALIE+V GT SADL+ +S+ E + +G
Sbjct: 185 NQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEG 244
Query: 239 VVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLA-DFEKCDAERA 297
V+++LR+PIS RALK+G+K LFALC VK +R A+ AGAP +LIDRLA DF++CD ERA
Sbjct: 245 VLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERA 304
Query: 298 LATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQMEA 357
LATVELLCR P GCA F HALTVP+LVK IL++SDRATEYAAGALL+LC+ ER + EA
Sbjct: 305 LATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWREEA 364
Query: 358 VAAGVLTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPQ-DSIGNSDDFACSQLVVVPF 414
AGV+ QLLL+VQS+CTE DSWP +S NSDDF CS VVPF
Sbjct: 365 AGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGCSSQ-VVPF 421
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/423 (60%), Positives = 321/423 (75%), Gaps = 11/423 (2%)
Query: 1 MRGCLEPLDLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRA 60
M G LEPLDLGIQIPYH+RCPISL+LM DPVT+ TGQTYDR+SI+SW+ GNTTCPVTR
Sbjct: 1 MPGNLEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRV 60
Query: 61 PLTEFTLIPNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQ---ISSASAS 117
L++FTLIPNHTLRRLIQEWCVANR+ GVERIPTPKQPA+P VRSLL+Q I+ S
Sbjct: 61 ALSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVS 120
Query: 118 THHRLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIF-----DNRSSDELSHESLALLV 172
R ++RRLR LARDS+ NR LIA H+ R I++RI S EL ESLALLV
Sbjct: 121 VRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLV 180
Query: 173 MFPLAESDCAAIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSV 232
+ + E++C A+A+D ++G+++ LL S+++RVN+AALIEMV+ G S DL+ +S
Sbjct: 181 LLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGS 240
Query: 233 EGIHDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRL-ADFEK 291
+ I +GV+++L++PIS RALK+G+KA+FALCLVKQ+R A++AGAP +LIDRL ADF++
Sbjct: 241 DSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDR 300
Query: 292 CDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESE 351
CD ER LATVELLCR+P GCA F HALTVP++VK IL++SDRATEYAAGALL+LC+ E
Sbjct: 301 CDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEE 360
Query: 352 RLQMEAVAAGVLTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPQDSIGNSDDFACSQLVV 411
R + EA AAG++TQLLLLVQSDCTE DSWP DS +SDDF S+ V
Sbjct: 361 RCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSE--V 418
Query: 412 VPF 414
PF
Sbjct: 419 APF 421
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 207/380 (54%), Gaps = 22/380 (5%)
Query: 8 LDLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGN-TTCPVTRAPLTEFT 66
+D I+IP + CPISLE+M+DPV V TG TYDR SIE W+ G +CPVT+ +T+
Sbjct: 6 MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDAD 65
Query: 67 LIPNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTH-HRLNSL 125
L PNHTLRRLIQ WC N ++GVERIPTP+ P + +S + ++ SAS+H +++ L
Sbjct: 66 LTPNHTLRRLIQSWCTLNASYGVERIPTPR----PPICKSEIEKLIRDSASSHENQVKCL 121
Query: 126 RRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSD-ELSHESLALLVMFPLAESDCAAI 184
+RLRQ+ ++ N+ + + V + I N S + L+ E+L LL +E+ +
Sbjct: 122 KRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNL 181
Query: 185 AADLDK---IGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVE 241
+ + L+ ++ + RV + L++ ++ AD ++ + VV+
Sbjct: 182 LNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNIL---EVADPMQSMTLKPEVFTEVVQ 238
Query: 242 ILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLAD----FEKCDAERA 297
IL IS +A K + L +C ++R +AV AG +V+I+ L D E+ E A
Sbjct: 239 ILDDRISQ-KATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMA 297
Query: 298 LATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLS---LCSESERLQ 354
+ ++LLC+ G AEF H + ++ K IL++S A++ A LLS C+ L
Sbjct: 298 MVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLH 357
Query: 355 MEAVAAGVLTQLLLLVQSDC 374
E + GV+ +L L++Q C
Sbjct: 358 -EMLQLGVVAKLCLVLQVSC 376
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 204/370 (55%), Gaps = 15/370 (4%)
Query: 12 IQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNH 71
I IP ++CPIS++LM+DPV + TG TYDR SIE+W+N+GN TCPVT LT F IPNH
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 72 TLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNS--LRRLR 129
T+R++IQ WCV + ++RIPTP+ P P V + ++SSA+ + + +++
Sbjct: 89 TIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIK 148
Query: 130 QLARDSDYNRSLIASHDVRRIVLRIFDNRSSDE----LSHESLALLV-MFPLAESDCAAI 184
+L +S+ NR + + V ++ FD S DE + +E L+LL MFP+ + +
Sbjct: 149 KLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSLLTWMFPIGLEGISKL 208
Query: 185 AADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVE-GIHDGVVEIL 243
A+ ++ LL VR N+A +++ +++ + R +VE G+ + +V+++
Sbjct: 209 AS-ATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDET---RVHSFAVENGVAEALVKLI 264
Query: 244 RSPISYPRALKVGVKALFALCLVK-QSRQRAVAAGAPAVLIDRLADFEKCDAERALATVE 302
R +S + A++ + L K + + G ++ ++ + D E E+ALA ++
Sbjct: 265 RDSVSSSSTKSSLI-AIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLD 323
Query: 303 LLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQME-AVAAG 361
+C G E +AL +P+LVK I K+S+ AT + +L L + +E AV G
Sbjct: 324 AICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLG 383
Query: 362 VLTQLLLLVQ 371
++LL++Q
Sbjct: 384 AFQKVLLVLQ 393
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 204/406 (50%), Gaps = 45/406 (11%)
Query: 8 LDLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGN-TTCPVTRAPLTEFT 66
+D I+IP + CPISL++M+DPV V TG TYDR SIE W+ +G +CPVT+ +TE
Sbjct: 1 MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD 60
Query: 67 LIPNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTH-HRLNSL 125
L PNHTLRRLIQ WC N ++G+ERIPTPK P + +S + ++ S+S+H +++ L
Sbjct: 61 LTPNHTLRRLIQSWCTLNASYGIERIPTPK----PPICKSEIEKLIKESSSSHLNQVKCL 116
Query: 126 RRLRQLARDSDYNRSLIASHDVRRIVLRIFDNR--------------------------- 158
+RLRQ+ ++ N+ + + +V + I N
Sbjct: 117 KRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLEN 176
Query: 159 ---SSDELSHESLALLVMFPLAESDCAAIAADLDKIGYLSVLLSHQSLDVRVNSAALIEM 215
SS L E+L++L +E+ ++ + + L + + A +
Sbjct: 177 RFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALL 236
Query: 216 VVAGTHSADLRSQVSSVEGIHDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVA 275
+ AD + + V++IL IS+ +A + ++ L C ++R +AV
Sbjct: 237 LKKLLEVADPMQIILLERELFGEVIQILHDQISH-KATRSAMQILVITCPWGRNRHKAVE 295
Query: 276 AGAPAVLIDRLAD----FEKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKI 331
G +++I+ L D E+ ++E A+ +++LC+ G AEF H + ++ K IL++
Sbjct: 296 GGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRV 355
Query: 332 SDRATEYAAGALLS---LCSESERLQMEAVAAGVLTQLLLLVQSDC 374
S +E A LLS C+ LQ E + GV+ +L L++Q C
Sbjct: 356 SQITSERAVRVLLSVGRFCATPSLLQ-EMLQLGVVAKLCLVLQVSC 400
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 186/376 (49%), Gaps = 20/376 (5%)
Query: 9 DLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLI 68
++ I IP ++CPIS ELM+DPV + +G TYDR +IE W +G TCPVT LT I
Sbjct: 28 EVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQI 87
Query: 69 PNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHR--LNSLR 126
PNHT+RR+IQ WC ++ G+ERIPTP+ P V + ++S+A+ + + +
Sbjct: 88 PNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT 147
Query: 127 RLRQLARDSDYNRSLIASHDVRRIVLRIFD----NRSSDELSHESLALLV-MFPLAESDC 181
++ +L ++S+ NR + + ++ FD N ++ L E++++L M P+
Sbjct: 148 KMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLEGQ 207
Query: 182 AAIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVE 241
+ + L LL + + L+E+ V H+ ++ + G+ + ++
Sbjct: 208 SKLTTT-SSFNRLVELLRNGDQNAAFLIKELLELNVTHVHA------LTKINGVQEAFMK 260
Query: 242 ILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALATV 301
+ + +L + + +++ R + + ++ L D E E+AL +
Sbjct: 261 SINRDSTCVNSL---ISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTVL 317
Query: 302 ELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQM-EAVAA 360
++C G + + L +P+LVK ILKIS++ + +C + ++ EA+
Sbjct: 318 NVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKVCKSGDGSEVEEALRL 375
Query: 361 GVLTQLLLLVQSDCTE 376
G +L++++Q C E
Sbjct: 376 GAFKKLVVMLQVGCGE 391
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 179/365 (49%), Gaps = 21/365 (5%)
Query: 14 IPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTL 73
IP +RCPISLE+MRDPV V +GQTY+R+ IE W+ G++TCP T+ LT TL PN+ L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 74 RRLIQEWCVAN--------RAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSL 125
R LI +WC AN + ++ + PAE + L+ ++ A + + ++
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRL--AYGNPEDQRSAA 373
Query: 126 RRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESDCAAIA 185
+R LA+ + NR IA +++ + S + S+ L+ + E++ AI
Sbjct: 374 GEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDS-RIQEHSVTALLNLSICENNKGAIV 432
Query: 186 ADLDKIGYLSVLLSHQSLDVRVNSAA-LIEMVVAGTHSADLRSQVSSVEGIHDGVVEILR 244
+ G + V L S++ R N+AA L + V + + + ++ I VV +L
Sbjct: 433 SAGAIPGIVQV-LKKGSMEARENAAATLFSLSVIDEN----KVTIGALGAIPPLVV-LLN 486
Query: 245 SPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALATVELL 304
R K ALF LC+ + ++ +A+ AG L L + + ALA + +L
Sbjct: 487 E--GTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAIL 544
Query: 305 CRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQMEAVAAGVLT 364
P G A G + VP LV+ I S R E AA L+ LCS + +EA G++
Sbjct: 545 SSHPEGKA-IIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMG 603
Query: 365 QLLLL 369
L+ L
Sbjct: 604 PLIDL 608
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 29/353 (8%)
Query: 12 IQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNH 71
+ IP + CP+SLELM+DPV V TGQTY+R+ I+ W++ GN TCP T+ L FTL PN+
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 72 TLRRLIQEWCVANRAFGVERIPTP--------KQPAEPALVRSLLNQISSASASTHHRLN 123
LR LI WC + I P K + +++R+L+ ++S S ST R N
Sbjct: 299 VLRSLISRWCAEH------NIEQPAGYINGRTKNSGDMSVIRALVQRLS--SRSTEDRRN 350
Query: 124 SLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLA-ESDCA 182
++ +R L++ S NR LIA +++ + +S++++ + A+ + L+ +
Sbjct: 351 AVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL---TSEDVATQENAITCVLNLSIYENNK 407
Query: 183 AIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVEI 242
+ + + +L +++ R N+AA + AD + G +V++
Sbjct: 408 ELIMFAGAVTSIVQVLRAGTMEARENAAA----TLFSLSLADENKIIIGGSGAIPALVDL 463
Query: 243 LRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCD-AERALATV 301
L + PR K ALF LC+ ++ RAV AG L+ L+D + + AL +
Sbjct: 464 LEN--GTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTIL 521
Query: 302 ELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCS-ESERL 353
+L + A T+P L+ I+ R E AA LLSLC ++E+L
Sbjct: 522 SVLANNQDAKSAIV-KANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKL 573
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 179/376 (47%), Gaps = 34/376 (9%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P +RCPISLELM DPV V +GQTY+R I+ W+ G+ TCP T+ LT + PN+ LR
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 75 RLIQEWCVANRAFGVERIPTPKQPA-----------------EPALVRSLLNQISSASAS 117
LI +WC +N G+E PK+P E + LL +++S
Sbjct: 317 SLIAQWCESN---GIE---PPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQP- 369
Query: 118 THHRLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLA 177
R ++ +R LA+ +++NR IA+ +++ + + ++ ++ +
Sbjct: 370 -EDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSIC 428
Query: 178 ESDCAAIAADLDKIGYLSVLLSHQSLDVRVNSAA-LIEMVVAGTHSADLRSQVSSVEGIH 236
+ + I + + +L S++ R N+AA L + V + + G
Sbjct: 429 QENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTI-----GAAGAI 483
Query: 237 DGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAER 296
+V +L R K ALF LC+ + ++ +AV AG VL+ L + E +
Sbjct: 484 PPLVTLLSE--GSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDE 541
Query: 297 ALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQME 356
+L+ + +L P G +E G A VP+LV I S R E +A L+ LCS +++ +E
Sbjct: 542 SLSILAILSSHPDGKSE-VGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIE 600
Query: 357 AVAAGVLTQLLLLVQS 372
A G++ L+ + ++
Sbjct: 601 AQKLGIMDLLIEMAEN 616
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 182/375 (48%), Gaps = 14/375 (3%)
Query: 1 MRGCLEPLDLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRA 60
++ ++ LDL IP + CPISLE M+DPVT+CTGQTY+R +I W N G+ TCP T
Sbjct: 52 LKKMIKELDLQ-DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQ 110
Query: 61 PLTEFTLIPNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHH 120
L + T+ PN TL LI W F ++ K+ +E R++ + A
Sbjct: 111 ELWDDTVTPNKTLHHLIYTW------FS-QKYVLMKKRSEDVQGRAIEILGTLKKAKGQA 163
Query: 121 RLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESD 180
R+++L L+Q+ R + ++ + +S + E +A+LV L +SD
Sbjct: 164 RVHALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDL-DSD 222
Query: 181 CAAIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVV 240
+ K+ + +L+ S + ++N A LI +V R+++ S + G++
Sbjct: 223 SKSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLV---EEKGFRAELVSSHSLLVGLM 279
Query: 241 EILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALAT 300
+++ + + ++ L + + KQ R V+ GA L+D L + E AL
Sbjct: 280 RLVKDK-RHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFV 338
Query: 301 VELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSES-ERLQMEAVA 359
++ LC G A T+P V++++++S+ T YA L S+C + E AV
Sbjct: 339 LDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAVE 398
Query: 360 AGVLTQLLLLVQSDC 374
G+ +LLL++QS C
Sbjct: 399 VGLAAKLLLVIQSGC 413
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 179/367 (48%), Gaps = 21/367 (5%)
Query: 13 QIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHT 72
+IP + CPISLE M+DPVT+CTGQTY+RS+I W N G+ TCP T L + + PN T
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKT 118
Query: 73 LRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRLRQLA 132
L +LI W F ++ K+ +E R++ + A ++++L L+Q+
Sbjct: 119 LHQLIYTW------FS-QKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVV 171
Query: 133 RDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESDCAAIAADLDKIG 192
+ + ++ + +S + E++A+LV L +SD A ++
Sbjct: 172 MAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLEL-DSDSKAGLMQPARVS 230
Query: 193 YLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVEILRSPISYPRA 252
+ +L+ S++ ++N A LI +V R+++ S + G++ +++ R
Sbjct: 231 LMVDMLNDGSIETKINCARLIGRLV---EEKGFRAELVSSHSLLVGLMRLVKD-----RR 282
Query: 253 LKVGVKA----LFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALATVELLCRVP 308
+ GV L ++ + KQ R V GA L+D L + E AL ++ LC
Sbjct: 283 RRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLES 342
Query: 309 AGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCS-ESERLQMEAVAAGVLTQLL 367
G T+P V++++K+S++ T YA L S+C SE AV G+ +LL
Sbjct: 343 EGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLL 402
Query: 368 LLVQSDC 374
L++QS C
Sbjct: 403 LVIQSGC 409
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 175/376 (46%), Gaps = 36/376 (9%)
Query: 9 DLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLI 68
++ I IP ++CPIS ELM+DP W +G TCPVT LT I
Sbjct: 28 EVEITIPSQFQCPISYELMKDP----------------WFESGYQTCPVTNTVLTSLEQI 71
Query: 69 PNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHR--LNSLR 126
PNHT+RR+IQ WC ++ G+ERIPTP+ P V + ++S+A+ + + +
Sbjct: 72 PNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT 131
Query: 127 RLRQLARDSDYNRSLIASHDVRRIVLRIFD----NRSSDELSHESLALLV-MFPLAESDC 181
++ +L ++S+ NR + + ++ FD N ++ L E++++L M P+
Sbjct: 132 KMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLEGQ 191
Query: 182 AAIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVE 241
+ + L LL + + L+E+ V H+ ++ + G+ + ++
Sbjct: 192 SKLTTT-SSFNRLVELLRNGDQNAAFLIKELLELNVTHVHA------LTKINGVQEAFMK 244
Query: 242 ILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALATV 301
+ + +L + + +++ R + + ++ L D E E+AL +
Sbjct: 245 SINRDSTCVNSL---ISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTVL 301
Query: 302 ELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQM-EAVAA 360
++C G + + L +P+LVK ILKIS++ + +C + ++ EA+
Sbjct: 302 NVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKVCKSGDGSEVEEALRL 359
Query: 361 GVLTQLLLLVQSDCTE 376
G +L++++Q C E
Sbjct: 360 GAFKKLVVMLQVGCGE 375
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 170/357 (47%), Gaps = 31/357 (8%)
Query: 14 IPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTL 73
IP ++RCPISLELM+DPV V TGQTY+RSSI+ W++ G+ TCP ++ L L PN+ L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 74 RRLIQEWCVANRAFGVERIP-------------TPKQPAEPALVRSLLNQISSASASTHH 120
+ LI WC +N G+E +P + + V SLL ++ A+ +T
Sbjct: 308 KSLIALWCESN---GIE-LPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKL--ANGTTEQ 361
Query: 121 RLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESD 180
+ + LR LA+ + NR IA +++ + + H ALL + + E +
Sbjct: 362 QRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNL-SINEGN 420
Query: 181 CAAIAADLDKIGYLSVLLSHQSLDVRVNSAA-LIEMVVAGTHSADLRSQVSSVEGIHDGV 239
AI D I + +L + S++ R N+AA L + V + + + + +
Sbjct: 421 KGAI-VDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQA-----L 474
Query: 240 VEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALA 299
+ +L R K A+F LC+ + ++ RAV G L L D + ALA
Sbjct: 475 ISLLEE--GTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALA 532
Query: 300 TVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLC-SESERLQM 355
+ +L G A A ++P+LV+II S R E AA L LC ERL +
Sbjct: 533 ILAILSTNQEGKTAIA-EAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNV 588
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 162/354 (45%), Gaps = 20/354 (5%)
Query: 11 GIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPN 70
+ IP + CPISLELM+DP V TGQTY+RS I+ W++ GN +CP T+ L FTL PN
Sbjct: 240 NLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPN 299
Query: 71 HTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISS--------ASASTHHRL 122
+ LR LI +WC + + R L +S+ +S S R
Sbjct: 300 YVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRR 359
Query: 123 NSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESDCA 182
++ +R L++ S NR LIA +++++ + E ++ ++ + E +
Sbjct: 360 TAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKE 419
Query: 183 AIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVEI 242
I + + ++L S++ R N+AA + AD + G +V++
Sbjct: 420 LIML-AGAVTSIVLVLRAGSMEARENAAA----TLFSLSLADENKIIIGASGAIMALVDL 474
Query: 243 LRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLAD--FEKCDAERALAT 300
L+ R K ALF LC+ + ++ RAV AG L+ L D E+ A+ AL
Sbjct: 475 LQ--YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERM-ADEALTI 531
Query: 301 VELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCS-ESERL 353
+ +L A +P L+ + K R E AA LL LC ++E+L
Sbjct: 532 LSVLASNQVAKTAIL-RANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKL 584
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 162/354 (45%), Gaps = 20/354 (5%)
Query: 11 GIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPN 70
+ IP + CPISLELM+DP V TGQTY+RS I+ W++ GN +CP T+ L FTL PN
Sbjct: 92 NLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPN 151
Query: 71 HTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISS--------ASASTHHRL 122
+ LR LI +WC + + R L +S+ +S S R
Sbjct: 152 YVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRR 211
Query: 123 NSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESDCA 182
++ +R L++ S NR LIA +++++ + E ++ ++ + E +
Sbjct: 212 TAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKE 271
Query: 183 AIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVEI 242
I + + ++L S++ R N+AA + AD + G +V++
Sbjct: 272 LIML-AGAVTSIVLVLRAGSMEARENAAA----TLFSLSLADENKIIIGASGAIMALVDL 326
Query: 243 LRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLAD--FEKCDAERALAT 300
L+ R K ALF LC+ + ++ RAV AG L+ L D E+ A+ AL
Sbjct: 327 LQ--YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERM-ADEALTI 383
Query: 301 VELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCS-ESERL 353
+ +L A +P L+ + K R E AA LL LC ++E+L
Sbjct: 384 LSVLASNQVAKTAIL-RANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKL 436
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 178/360 (49%), Gaps = 24/360 (6%)
Query: 10 LGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEF-TLI 68
+ +P +RCPISLE+M DPV + +G T+DR SI+ W+++GN TCP+T+ PL+E LI
Sbjct: 1 MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLI 60
Query: 69 PNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRL 128
PNH LR LI + A+ + P +Q + ++L++ + S S+S +L SL RL
Sbjct: 61 PNHALRSLILNF--AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRL 118
Query: 129 RQLA-RDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESDC-AAIAA 186
+L RDS R + S V R L D S +++ E L++ E D + A
Sbjct: 119 VRLTKRDSSIRRKVTESGAV-RAALDCVD--SCNQVLQEKSLSLLLNLSLEDDNKVGLVA 175
Query: 187 DLDKIGYLSVLLSHQSLDVRVNSAALI-EMVVAGTHSADLRSQVSSVEGIHDGVVEILRS 245
D I + +L S D + +A L+ + V + A + S ++ + V +LR
Sbjct: 176 D-GVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISAL----VSLLR- 229
Query: 246 PISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDA--ERALATVEL 303
+ R K AL+ALC +R+R V G+ +L+ E D+ ERA+ + L
Sbjct: 230 -VGNDRERKESATALYALCSFPDNRKRVVDCGSVPILV------EAADSGLERAVEVLGL 282
Query: 304 LCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQMEAVAAGVL 363
L + G E + + V +LV ++ + + +Y+ L LC S + E GV+
Sbjct: 283 LVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDEVKREGVV 342
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 184/430 (42%), Gaps = 49/430 (11%)
Query: 12 IQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLT-EFTLIPN 70
I+IP ++ CPISLE+M+DPVT +G TYDR +I W+ +CPVT+ PL + L PN
Sbjct: 22 IEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPLDSDLTPN 80
Query: 71 HTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRLRQ 130
H LRRLIQ WCV N GV RI TP+ P V + + R +L++L
Sbjct: 81 HMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQKLEV 140
Query: 131 LARDSDYNRSLIASHDVRR-IVLRIFDNRSSDELSH-------ESLALLVMFPLAESDCA 182
LA D + NR L+ V + ++L + S DE ESL LL + + +D
Sbjct: 141 LAMDGN-NRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIPSNDAK 199
Query: 183 AIAADLDKI-GYLSVLLSHQSLDVRVNSAALIEMVVAGTHS---------------ADLR 226
I + D++ L+ +L + + + L+ + T S L+
Sbjct: 200 TILMENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFKGIIGFLK 259
Query: 227 SQVSSVEGIHDGVVEILRSPISYPRALKVGVKALFALCLVKQ---------------SRQ 271
V+SV V E ++S S P K L ++KQ SR
Sbjct: 260 DVVNSVNRTSPTVRETVQSS-SRPSLGKTEPSKLDHSLVIKQAVTAALMILLETSSWSRN 318
Query: 272 RA--VAAGAPAVLIDRLADF--EKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKI 327
R+ V GA + LI+ + EK E L + LC G AE H + ++ K
Sbjct: 319 RSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVTKR 378
Query: 328 ILKISDRATEYAAGAL--LSLCSESERLQMEAVAAGVLTQLLLLVQSDCTEXXXXXXXXX 385
+L++S A + A L +S S + E V G + +L ++ DC
Sbjct: 379 LLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLKEKAKEI 438
Query: 386 XXXXXDSWPQ 395
D W +
Sbjct: 439 LKDHFDEWKK 448
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 189/402 (47%), Gaps = 68/402 (16%)
Query: 12 IQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNH 71
I +P ++CPISL++MR PV++CTG TYDR+SI+ W++ GN TCP T L +PN
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69
Query: 72 TLRRLIQEW--CVANRAFG---VERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLR 126
TL+RLI W + R G V P+ ++ V LL ++ S L +L
Sbjct: 70 TLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMS--------LENLM 121
Query: 127 RLRQLARDSDYNRSLIASH--------DVRR----------IVLRIFDNRSSDELSHESL 168
++ + +DSD NR ++ D+ R + +RI D S ++ E L
Sbjct: 122 KIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILD---SIKVDRERL 178
Query: 169 ALLVMFPLAESDCAAIAADLDKIGYLSVLLSHQ--SLDVRVNSAALIEMVVAGTHSADLR 226
+ L M DC ++LL+ Q +L+ ++ S +++ + S D +
Sbjct: 179 SNL-MLANDGGDCLT-----------AILLAIQRGNLESKIESVRVLDWI-----SFDAK 221
Query: 227 SQVSSVEGIHDGVVEILRSPISY-----PRALKVGVKALFALCLVKQSRQRAVAAGAPAV 281
S++ E DGV+ + IS P ++ + L + K+ R + +AA A
Sbjct: 222 SKLMIAE--RDGVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITK 279
Query: 282 LIDRLADFEKCD---AERALATVELLCRVPAGCAEFAG--HALTVPMLVKIILKISDRAT 336
+ D L + E++L +E L G E G + V +VK +LK+S AT
Sbjct: 280 IKDILLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTAT 339
Query: 337 EYAAGALLSLC---SESERLQMEAVAAGVLTQLLLLVQSDCT 375
E+A L LC E + ++ + +T+LL+++QS+C+
Sbjct: 340 EHAVTILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCS 381
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 188/404 (46%), Gaps = 60/404 (14%)
Query: 9 DLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLI 68
DL I +P +RCPISL++M+ PV++CTG TYDR+SI+ W++ GN TCP T L I
Sbjct: 5 DLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFI 64
Query: 69 PNHTLRRLIQEW--------CVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHH 120
PN TL+RLI+ W CV + PT + A+ ++++
Sbjct: 65 PNRTLQRLIEIWSDSVRRRTCVESAELAA---PTRDEIADA------IDRVKIEKEERDD 115
Query: 121 RLNSLRRLRQLARDSDYNRSLIASHD--VRRIVLRI----FDNRSSDE--LSHESLALLV 172
R L ++ + R+SD NR +A D V+ +V I F+ S+ + + E++ +L
Sbjct: 116 R-EVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILS 174
Query: 173 MFPLAESD-----CAAIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRS 227
SD + D++ + L +++++++ A L+E + S L +
Sbjct: 175 TIRSKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIA 234
Query: 228 QVSSVEGIHDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRL- 286
+ DG++ L IS L + +L CL+ S + V +L ++L
Sbjct: 235 E-------RDGLITELMKSISKDSDLSLIESSLS--CLIAISSPKRVKLN---LLREKLI 282
Query: 287 ADFEK-----------CDAERALATVELLCRVPAGCAEF-AGHALTVPMLVKIILKISDR 334
D K E+ L +E+L G +E G + +VK ++K+S
Sbjct: 283 GDVTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTA 342
Query: 335 ATEYAAGALLS---LCSESERLQMEAVAAGVLTQLLLLVQSDCT 375
ATE+A L S L E + L+ GV T++LLL+QS+C+
Sbjct: 343 ATEHAVTVLWSVSYLFKEDKALEAVTSVNGV-TKILLLLQSNCS 385
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 136/267 (50%), Gaps = 15/267 (5%)
Query: 14 IPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTL 73
+P+ + CPI+LE+M DPV + TGQTY++ SI+ W + G+ TCP TR L +L PN L
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFAL 349
Query: 74 RRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRLRQLAR 133
+ LI +WC N E+ +P E SLL + S+S R S++++R LAR
Sbjct: 350 KNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQR-RSVKQMRLLAR 408
Query: 134 DSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESDCAAIAADLDKIGY 193
++ NR LIA+ +++++ S + ++ L+ + E + I+ + I
Sbjct: 409 ENPENRVLIANAGAIPLLVQLLSYPDSG-IQENAVTTLLNLSIDEVNKKLISNE-GAIPN 466
Query: 194 LSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGV---VEILRSPISYP 250
+ +L + + + R NSAA + S + + G+ +G+ V++L+
Sbjct: 467 IIEILENGNREARENSAAAL-------FSLSMLDENKVTIGLSNGIPPLVDLLQH--GTL 517
Query: 251 RALKVGVKALFALCLVKQSRQRAVAAG 277
R K + ALF L L ++ RA+ AG
Sbjct: 518 RGKKDALTALFNLSLNSANKGRAIDAG 544
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 173/376 (46%), Gaps = 37/376 (9%)
Query: 12 IQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNH 71
+ P +RCP+S ELMRDPV + +GQTYD+ I+ W+++GN TCP T+ L L PN
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNL 131
Query: 72 TLRRLIQEWCVANRAFGVERIPTPKQPAEPALV----------RSLLNQI--SSASASTH 119
+R +I +WC N G+E K P LV R + N + +S++
Sbjct: 132 LIREMISKWCKKN---GLE----TKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQ 184
Query: 120 HRLNSLRRLRQLARDSDYNRSLIAS--HDVRRIVLRIFDNRSSDELSHESL--ALLVMFP 175
+ ++ + LR L R R+L ++ R+V + + DE E + LL +
Sbjct: 185 DQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISI 244
Query: 176 LAESDCAAIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGI 235
+S+ + + + I L L ++ R N+AA I + A D + GI
Sbjct: 245 HDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSA----LDSNKVLIGKSGI 300
Query: 236 HDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAE 295
++++L P A+K A+F LC+ ++R RAV GA VL ++++ D
Sbjct: 301 LKPLIDLLEE--GNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVD-- 356
Query: 296 RALATVELLCRVPAGCAEFAGHALTVPMLVKIILKIS-DRATEYAAGALLSLC----SES 350
LA + +L E G V L+KI + R E A L ++C ++
Sbjct: 357 ELLAILAMLVTHWKAVEEL-GELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKW 415
Query: 351 ERLQMEAVAAGVLTQL 366
+ ++ E A G +T+L
Sbjct: 416 KEIKEEENAHGTITKL 431
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 179/381 (46%), Gaps = 36/381 (9%)
Query: 14 IPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTL 73
+P ++CPISL++M+ PV++ TG TYDR SI+ W++ GN TCP T L +PN TL
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTL 70
Query: 74 RRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRLRQLAR 133
RLI W + + R + P R ++I++A ++ ++ + AR
Sbjct: 71 HRLIDHW-----SDSINRRADSESPESDTPTR---DEINAAIERFRIENDARSKILRFAR 122
Query: 134 DSDYNRSLIASHD--VRRIVLRIFDNRSSDE----LSHESLALLVM-----FPLAESDCA 182
+SD NR +A D V +V I D+R+ + L E++ +L M F
Sbjct: 123 ESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLSNL 182
Query: 183 AIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVEI 242
+ D + +L+ + ++++ +A++E + S + ++ EG+ V EI
Sbjct: 183 ILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLI---IAKGEGL---VTEI 236
Query: 243 LRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADF------EKCDAER 296
++ S + ++A +L + S +R A L+ +L E+
Sbjct: 237 IKLISSD--SDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEK 294
Query: 297 ALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCS--ESERLQ 354
L +E + G +E + V +V ++K+S ATE+A L S+C + ++ Q
Sbjct: 295 CLKLLEAISSCKEGRSEIC-DGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQ 353
Query: 355 MEAVAAGVLTQLLLLVQSDCT 375
+ +T++LLL+QS+C+
Sbjct: 354 DAVIRINGVTKILLLLQSNCS 374
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 31/380 (8%)
Query: 9 DLGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLI 68
D I +P + CPISL+LM DPV + TGQTYDR+SI W+ G+ TCP T L + ++
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIV 359
Query: 69 PNHTLRRLIQEWCVANR-AFGVERIPTPKQP------------AEPALVRSLLNQISSAS 115
PN L+ LI +WC A+ ++ E +P + A A V L+ ++ S
Sbjct: 360 PNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGS 419
Query: 116 ASTHHRLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHE-SLALLVMF 174
+ + R +R LA+ NR+ IA + R+ S + ++ E S+ ++
Sbjct: 420 QAAQTV--AAREIRLLAKTGKENRAYIAEAGAIPHLCRLLT--SENAIAQENSVTAMLNL 475
Query: 175 PLAESDCAAIAADLDKI-GYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVE 233
+ E + + I + D + +SVL+S +++ + N+AA + ++ H + + +++ V+
Sbjct: 476 SIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATL-FSLSAVH--EYKKRIAIVD 532
Query: 234 GIHDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCD 293
+ + +L++ PR K V AL+ L + R + G + L+ L + +
Sbjct: 533 QCVEALALLLQN--GTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKN--EGV 588
Query: 294 AERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSE---- 349
AE A + LL R G V L+ ++ + R E A ALL LC
Sbjct: 589 AEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAA 648
Query: 350 -SERLQMEAVAAGVLTQLLL 368
+E++ AG+L LL
Sbjct: 649 VAEKVLRAPAIAGLLQTLLF 668
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 11 GIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPN 70
GI IP ++RCP+S ELM DPV V +GQT+DR+SI+ W++ G CP TR LT LIPN
Sbjct: 199 GISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPN 258
Query: 71 HTLRRLIQEWCVANR 85
+T++ +I W ANR
Sbjct: 259 YTVKAMIASWLEANR 273
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 11 GIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPN 70
GI IP ++RCP+S ELM DPV V +GQT+DR+SI+ W++ G CP TR LT LIPN
Sbjct: 235 GISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPN 294
Query: 71 HTLRRLIQEWCVANR 85
+T++ +I W ANR
Sbjct: 295 YTVKAMIASWLEANR 309
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%)
Query: 13 QIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHT 72
IP +RCPI+LELMRDPV V TGQTYDR SI+ W+ +G+ TCP T L +L+PN
Sbjct: 273 NIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRA 332
Query: 73 LRRLIQEWC 81
L+ LI WC
Sbjct: 333 LKNLIVLWC 341
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 161/353 (45%), Gaps = 31/353 (8%)
Query: 20 CPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLRRLIQE 79
CPISLE+M DPV + TG TYDRSSI W +GN TCP+T LT L+ N ++R++I++
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRK 353
Query: 80 WCVANRAF--GVER--------IPTP--KQPAEPALVRSLLNQISSASASTHHRLNSLRR 127
C N G+ R +P + A + + L +++ + +R ++R
Sbjct: 354 HCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYR--AVRE 411
Query: 128 LRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAE--SDCAAIA 185
+R + S +NRS + +L++ SS ++ + A+ + L++ + + IA
Sbjct: 412 IRVQTKTSSFNRSCLVKAGAVTPLLKLL---SSVDIRIQENAMAGILNLSKHVTGKSKIA 468
Query: 186 ADLDKIGYLSVLLSHQSLDVRVNSA-ALIEMVVAGTHSADLRSQVSSVEGIHDGVVEILR 244
+ KI + +L + R+ SA AL + +S + ++ G+ + I++
Sbjct: 469 GEGLKI-LVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGL----MNIVK 523
Query: 245 SPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERA--LATVE 302
A + + A+ L + + R +AAGA +L+D L E A LAT+
Sbjct: 524 GDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLA 583
Query: 303 LLCRVPAGCAEFAGHALTVPMLVKIILKISDR---ATEYAAGALLSLCSESER 352
L P G + + VKI+ D ++ G +L+LC R
Sbjct: 584 KLAEYPDGTIGVIRRG-GLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGR 635
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 18 YRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLRRLI 77
+ CP+SLE+M DPV V +GQTY+++ I+ W++ G CP TR LT TLIPN+T++ LI
Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 293
Query: 78 QEWCVANRAFGVERIPTPKQ 97
WC N ++P P +
Sbjct: 294 ANWCETNDV----KLPDPNK 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 25/329 (7%)
Query: 53 TTCPVTRAPLTEFTLIPNHTLRRL-IQEWCVANRAFGVERIPTPKQPAEPAL------VR 105
TT TR L++F+ P RR Q W + G + P L V+
Sbjct: 487 TTSAATRRDLSDFS--PKFMDRRTRGQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVK 544
Query: 106 SLLNQISSASASTHHRLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSH 165
L+ ++ S+S T + + LR LA+ + NR +I + IVL + S+D +
Sbjct: 545 KLVEELKSSSLDTQRQATA--ELRLLAKHNMDNRIVIGNSGA--IVLLVELLYSTDSATQ 600
Query: 166 ES-LALLVMFPLAESDCAAIAADLDKIGYLSVLLSHQSLDVRVNSAA-LIEMVVAGTHSA 223
E+ + L+ + +++ AIA D I L +L + S + + NSAA L + V +
Sbjct: 601 ENAVTALLNLSINDNNKKAIA-DAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKI 659
Query: 224 DLRSQVSSVEGIHDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLI 283
+ G +V++L + PR K ALF L + ++++ V +GA LI
Sbjct: 660 KI-----GQSGAIGPLVDLLGN--GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLI 712
Query: 284 DRLADFEKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGAL 343
D L D ++A+A + L +P G G +P+LV+++ S R E AA AL
Sbjct: 713 D-LMDPAAGMVDKAVAVLANLATIPEGRNAI-GQEGGIPLLVEVVELGSARGKENAAAAL 770
Query: 344 LSLCSESERLQMEAVAAGVLTQLLLLVQS 372
L L + S R + G + L+ L QS
Sbjct: 771 LQLSTNSGRFCNMVLQEGAVPPLVALSQS 799
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 18 YRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLRRLI 77
+ CP+SLE+M DPV V +GQTY+++ I+ W++ G CP TR LT TLIPN+T++ LI
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 296
Query: 78 QEWCVANRAFGVERIPTPKQ 97
WC N ++P P +
Sbjct: 297 ANWCETNDV----KLPDPNK 312
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 25/329 (7%)
Query: 53 TTCPVTRAPLTEFTLIPNHTLRRL-IQEWCVANRAFGVERIPTPKQPAEPAL------VR 105
TT TR L++F+ P RR Q W + G + P L V+
Sbjct: 490 TTSAATRRDLSDFS--PKFMDRRTRGQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVK 547
Query: 106 SLLNQISSASASTHHRLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSSDELSH 165
L+ ++ S+S T + + LR LA+ + NR +I + IVL + S+D +
Sbjct: 548 KLVEELKSSSLDTQRQATA--ELRLLAKHNMDNRIVIGNSGA--IVLLVELLYSTDSATQ 603
Query: 166 ES-LALLVMFPLAESDCAAIAADLDKIGYLSVLLSHQSLDVRVNSAA-LIEMVVAGTHSA 223
E+ + L+ + +++ AIA D I L +L + S + + NSAA L + V +
Sbjct: 604 ENAVTALLNLSINDNNKKAIA-DAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKI 662
Query: 224 DLRSQVSSVEGIHDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLI 283
+ G +V++L + PR K ALF L + ++++ V +GA LI
Sbjct: 663 KI-----GQSGAIGPLVDLLGN--GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLI 715
Query: 284 DRLADFEKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAGAL 343
D L D ++A+A + L +P G G +P+LV+++ S R E AA AL
Sbjct: 716 D-LMDPAAGMVDKAVAVLANLATIPEGRNAI-GQEGGIPLLVEVVELGSARGKENAAAAL 773
Query: 344 LSLCSESERLQMEAVAAGVLTQLLLLVQS 372
L L + S R + G + L+ L QS
Sbjct: 774 LQLSTNSGRFCNMVLQEGAVPPLVALSQS 802
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 23/157 (14%)
Query: 12 IQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNH 71
+++P +RC +SLELM DPV V +GQT++R I+ W++ G CP TR L+ TL PN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 72 TLRRLIQEWCVANRAFGVERIPTPKQPAE--------PALVRSLLNQISSASASTHHRLN 123
+R + WC N + P P E P LV S+ +S+S + H
Sbjct: 298 IVRAFLASWCETNNVY-------PPDPLELIHSSEPFPLLVESVR---ASSSENGHSESL 347
Query: 124 SLRRLRQLARDSDYNRSLIASHDVRRIVLRIFDNRSS 160
LRQ+ ++RS A V +V + N ++
Sbjct: 348 DAEELRQV-----FSRSASAPGIVSEVVCKTKRNNNA 379
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 104 VRSLLNQISSASASTHHRLNSLRRLRQLARDSDYNRSLIAS-HDVRRIVLRIFDNRSSDE 162
V+ L++ + S+S T + R+R LAR+S NR +IA + +V ++ S+DE
Sbjct: 423 VKKLIDDLKSSSLDTQREATA--RIRILARNSTDNRIVIARCEAIPSLVSLLY---STDE 477
Query: 163 -LSHESLALLVMFPLAESDCAAIAADLDKIGYLSVLLSHQSLDVRVNSAA-LIEMVVAGT 220
+ +++ L+ + +++ + IA + + VL + + + NSAA L + V
Sbjct: 478 RIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEE 537
Query: 221 HSADLRSQVSSVEGIHDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPA 280
+ ++ G + +V++L S K ALF L + +++ + + AGA
Sbjct: 538 YKTEIGEA-----GAIEPLVDLLGS--GSLSGKKDAATALFNLSIHHENKTKVIEAGAVR 590
Query: 281 VLIDRLADFEKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAA 340
L++ L D E+A+ + L V G G +P+LV+++ S R E A
Sbjct: 591 YLVE-LMDPAFGMVEKAVVVLANLATVREGKIAI-GEEGGIPVLVEVVELGSARGKENAT 648
Query: 341 GALLSLCSESERLQMEAVAAGVLTQLLLLVQS 372
ALL LC+ S + + GV+ L+ L +S
Sbjct: 649 AALLQLCTHSPKFCNNVIREGVIPPLVALTKS 680
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P RCPISL+LM DPV + +GQTY+R IE W + G+ TCP T L+ L PN+ ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 75 RLIQEWCVANRAFGVERIPTPKQPAE 100
LI WC N GV+ P P E
Sbjct: 340 ALISSWCEQN---GVQ---VPDGPPE 359
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P RCPISL+LM DPV + +GQTY+R IE W + G+ TCP T+ L +L PN+ ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 75 RLIQEWCVAN 84
LI WC N
Sbjct: 333 GLIASWCEQN 342
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P RCPISL+LM DPV + +GQTY+R IE W + G+ TCP T+ L +L PN+ ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 75 RLIQEWCVAN 84
LI WC N
Sbjct: 333 GLIASWCEQN 342
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P RCPISL+LM DPV + +GQTY+R IE W + G+ +CP T+ L +L PN+ ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 75 RLIQEWCVAN 84
LI WC N
Sbjct: 336 GLIASWCEQN 345
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 19/275 (6%)
Query: 12 IQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNH 71
+++P + C +S +M +PV + +GQTY++ I W+ TCP T+ L+ IPNH
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK-HERTCPKTKQVLSHRLWIPNH 128
Query: 72 TLRRLIQEWCVANRAFGVERIPTPKQPAE--PALVRSLLNQISSASASTHHRLNSLRRLR 129
+ LI +WC+ N+ + ++ P+ + AE + + +LL ++SS S+S ++ + + LR
Sbjct: 129 LISDLITQWCLVNK-YDHQK-PSDELVAELFTSDIEALLQRVSS-SSSVADQIEAAKELR 185
Query: 130 QLARDSDYNRSLIAS--HD-VRRIV--LRIFDN--RSSDELSHESLALLVMFPLAESDCA 182
+ R + HD + R++ L D SS EL + L + ES+
Sbjct: 186 HQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESNKT 245
Query: 183 AIAADLDKIGYLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEGIHDGVVEI 242
IA + I L+ L + + R N+AA + + A + + +V+ + D + E
Sbjct: 246 VIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEE- 304
Query: 243 LRSPISYPRALKVGVKALFALCLVKQSRQRAVAAG 277
A K +F LC+V +++ + V+AG
Sbjct: 305 -----GDLLATKEATSTVFNLCIVLENKGKVVSAG 334
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 14 IPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTL 73
+P ++C +S +M DPV + +G T++R I+ W + GN +CP+++ L +FTL PN L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 74 RRLIQEWCVAN 84
+ I EWC N
Sbjct: 279 KSQISEWCAKN 289
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 14/126 (11%)
Query: 11 GIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPN 70
+++P ++C +S +M DPV + +GQTY++ I W+N + TCP + L L PN
Sbjct: 71 SVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCLTPN 129
Query: 71 HTLRRLIQEWCVANRAFGVERIPTPKQPAEPALV--------RSLLNQISSASASTHHRL 122
H + LI WC+AN+ +R P PK P++ V SLL +ISS S+S +
Sbjct: 130 HLINELITRWCLANK---YDR-PAPK-PSDIDYVTELFTDGIESLLQRISSPSSSVADQT 184
Query: 123 NSLRRL 128
+ + L
Sbjct: 185 EAAKEL 190
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 19 RCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLRRLIQ 78
RCPISLE+M DPV + +G TYDRSSI W +GN TCP T L L+ N +++++IQ
Sbjct: 283 RCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQ 342
Query: 79 EWCVAN 84
+ N
Sbjct: 343 SYSKQN 348
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 18 YRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLRRLI 77
++CPIS+E+MRDP G TY+ W+ +G T P T PL L+PNHTLR +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 78 QEWCVANRAF 87
++W N +
Sbjct: 297 KDWLEKNPNY 306
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 13 QIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHT 72
Q P ++ CPIS E+MR+P G TY+ S+ W++ G+ T P+T L L+PNH
Sbjct: 496 QPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHA 555
Query: 73 LRRLIQEWCVAN 84
LR IQEW N
Sbjct: 556 LRSAIQEWLQRN 567
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P ++ CPISLE+M+DP G TY+ +I +W+ G+ T P+T L L+PN LR
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 75 RLIQEWCVANRAF 87
IQEW A+ +F
Sbjct: 386 SAIQEWLHASSSF 398
>AT5G11550.1 | Symbols: | ARM repeat superfamily protein |
chr5:3708203-3709147 REVERSE LENGTH=314
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 234 GIHDGVVEILRSPISYPRALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCD 293
G+ G+V LRS A K K L ALCL + +R AV AGA +++ A E
Sbjct: 141 GLMRGLVSCLRSNNKIVTA-KYVTKILLALCLAEGNRHVAVEAGAARAVVETAAGLEISA 199
Query: 294 AERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYA 339
ERALA +EL+C G AE HA+TVP +V ++ +++ R EYA
Sbjct: 200 VERALAALELMCTTAEGAAEVRAHAMTVPAMVAVMARLAGRGREYA 245
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 37/66 (56%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P HY CPI E+M DP G TY+R +I+ W+ PVT+ L L PNHTLR
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 75 RLIQEW 80
I+EW
Sbjct: 769 SAIREW 774
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 13 QIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHT 72
Q P H+ CP+ ++M++P G TYDR +IE W+ + T PVT +PL L+PNHT
Sbjct: 748 QPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHT 806
Query: 73 LRRLIQEWCVANR 85
L I EW N+
Sbjct: 807 LYAAIVEWRNRNQ 819
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 11 GIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPN 70
++ P HY CPI E+M +P G TY+R +I +W+ N + PVTR L F L PN
Sbjct: 722 NLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKLTPN 780
Query: 71 HTLRRLIQEW 80
HTLR I++W
Sbjct: 781 HTLRSAIRDW 790
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P HY CPI E+M+DP+ G TY+ +I W+ G+ T P+T + + LIPNH L
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 785
Query: 75 RLIQEW 80
IQ+W
Sbjct: 786 LAIQDW 791
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P HY CPI E+M+DP+ G TY+ +I W+ G+ T P+T + + LIPNH L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 75 RLIQEW 80
IQ+W
Sbjct: 796 LAIQDW 801
>AT3G02840.1 | Symbols: | ARM repeat superfamily protein |
chr3:618480-619619 FORWARD LENGTH=379
Length = 379
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 23/306 (7%)
Query: 89 VERIPTPKQPAEPALVRSLLNQISSASASTHHR--LNSLRRLRQLARDSDYNRSLIASHD 146
+ERI +P+ P + ++ +A+A + L + +++ L R D N+ + +
Sbjct: 40 IERIQSPRVLLTPRDAVEISRRLQNAAAREEYAECLEIVSKIKNLGRGGDTNKKCLVQNG 99
Query: 147 VRRIVLRIFDNRSSDELSHESLALLVMF------PLAESDCAAIAADLDKIGYLSVLLSH 200
+ F+ ++ H L ++F PL S+ + L L+
Sbjct: 100 SVLALSSCFERFAAARDGHMRLLEEILFVLSSWLPLNRSEGFNKMGSTASLNCLVRFLNG 159
Query: 201 QSLDVRVNSAALIEMVVAGTHSADLRS--QVSSVEGIHDGVVEILRSPISYPRALKVGVK 258
+ R N+A I V+A D R ++ VEG +G+V+I+R +S + K +
Sbjct: 160 KDAKTRQNAAFCIREVIA----VDKRYVYALTDVEGACEGLVKIIRDSVSTS-STKASLM 214
Query: 259 ALF-ALCLVKQSRQRAVAAGAPAVLIDRLADF-EKCDAERALATVELLCRVPAGCAEFAG 316
++ A+ + ++ V G ++ + + + EK ER+L + C G +
Sbjct: 215 VIYRAISSNDKITEKFVKLGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKEDVLR 274
Query: 317 HALTVPMLVKIILKISDRATEYAAGALLSLCSES------ERLQMEAVAAGVLTQLLLLV 370
+AL VP+LVK IL++SD AT+ + L L +RL +EA+ G +LL+L+
Sbjct: 275 NALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEKLLVLL 334
Query: 371 QSDCTE 376
Q C +
Sbjct: 335 QVGCED 340
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 10 LGIQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIP 69
+ Q P H+ CP+ ++M +P G TYDR +IE W+ NT+ P+T +PL L+P
Sbjct: 762 VSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNTS-PMTDSPLHSKNLLP 820
Query: 70 NHTLRRLIQEW 80
N+TL I EW
Sbjct: 821 NYTLYTAIMEW 831
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 13 QIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHT 72
Q P + CPI+ E+M+DP G TY+ SI W++TG+ T P+T L+ TL+PN
Sbjct: 417 QPPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRA 476
Query: 73 LRRLIQE 79
LR I+E
Sbjct: 477 LRSAIEE 483
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 14 IPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTL 73
IP + CPI E+M++P G +Y+ +I+ W++ G+ T P+T L L PNHTL
Sbjct: 715 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 774
Query: 74 RRLIQEW 80
R LIQ+W
Sbjct: 775 RSLIQDW 781
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P ++ CPI E+M+DP G TY+ +I +W+++ + T P+T L+ +LI NH LR
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 75 RLIQEW 80
IQEW
Sbjct: 824 SAIQEW 829
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 12 IQIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNH 71
+++P + C +S ++M +P+ + +GQT+++S I W+ TCP T+ L +IPNH
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK-HERTCPRTKQVLYHRFMIPNH 121
Query: 72 TLRRLIQEWCVANRAFGVERIPTPKQPAE-----PALVRSLLNQISSASA 116
+ +I+EWC+ + PK E + SLL +ISS S+
Sbjct: 122 LINEVIKEWCL------IHNFDRPKTSDEVIDLFTGDLESLLQRISSPSS 165
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 41/231 (17%)
Query: 11 GIQIPYH-YRCPISLELMRDPVTVCTGQTYDRSSIESWV-----NTGNTTCPVTRAPLTE 64
GI Y + CP++ ++M +PVT+ GQT++R +IE W N +CP+T L+
Sbjct: 21 GIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSI 80
Query: 65 FTLIPNHTLRRLIQEWCVANRAFGVE---------------------------RIPTPKQ 97
L P+ LR I+EW N A ++ I +Q
Sbjct: 81 TDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQ 140
Query: 98 PA-EPALVRSLLNQISSASASTHHRLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFD 156
P LVR + + + S+S R +L+ L+ + + +++++A D R +++
Sbjct: 141 RVCNPQLVRLITDMLKSSSHEV--RCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLS 198
Query: 157 NRSSDELSHESLALLVMFPLAESD--CAAIAADLDKIGYLSVLLSHQSLDV 205
S A+ V+F L++S+ C I + I L L S +S +V
Sbjct: 199 QEPS---KGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENV 246
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 41/231 (17%)
Query: 11 GIQIPYH-YRCPISLELMRDPVTVCTGQTYDRSSIESWV-----NTGNTTCPVTRAPLTE 64
GI Y + CP++ ++M +PVT+ GQT++R +IE W N +CP+T L+
Sbjct: 21 GIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSI 80
Query: 65 FTLIPNHTLRRLIQEWCVANRAFGVE---------------------------RIPTPKQ 97
L P+ LR I+EW N A ++ I +Q
Sbjct: 81 TDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQ 140
Query: 98 PA-EPALVRSLLNQISSASASTHHRLNSLRRLRQLARDSDYNRSLIASHDVRRIVLRIFD 156
P LVR + + + S+S R +L+ L+ + + +++++A D R +++
Sbjct: 141 RVCNPQLVRLITDMLKSSSHEV--RCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLS 198
Query: 157 NRSSDELSHESLALLVMFPLAESD--CAAIAADLDKIGYLSVLLSHQSLDV 205
S A+ V+F L++S+ C I + I L L S +S +V
Sbjct: 199 QEPS---KGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENV 246
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 15 PYH-YRCPISLELMRDPVTVCTGQTYDRSSIESWVNT-GNT---TCPVTRAPLTEFTLIP 69
PY + CP++ E+M DPVT TG T +R ++ W ++ GN+ CPVT LT L
Sbjct: 246 PYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT-ELSA 304
Query: 70 NHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRLR 129
N L+ +IQEW V N A + + A AL S S +++LR L+
Sbjct: 305 NVVLKTIIQEWKVRNEAARI-------KVAHAAL---------SLGGSESMVIDALRDLQ 348
Query: 130 QLARDSDYNRSLIASHDVRRIVLRIFDNRSSD 161
+YN+ + + +++ R RS D
Sbjct: 349 MTCEGKEYNKVQVREAGIIQLLDRYLTYRSKD 380
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 15 PYH-YRCPISLELMRDPVTVCTGQTYDRSSIESWVNT-GNT---TCPVTRAPLTEFTLIP 69
PY + CP++ E+M DPVT TG T +R ++ W ++ GN+ CPVT LT L
Sbjct: 246 PYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT-ELSA 304
Query: 70 NHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRLR 129
N L+ +IQEW V N A + + A AL S S +++LR L+
Sbjct: 305 NVVLKTIIQEWKVRNEAARI-------KVAHAAL---------SLGGSESMVIDALRDLQ 348
Query: 130 QLARDSDYNRSLIASHDVRRIVLRIFDNRSSD 161
+YN+ + + +++ R RS D
Sbjct: 349 MTCEGKEYNKVQVREAGIIQLLDRYLTYRSKD 380
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 15 PYH-YRCPISLELMRDPVTVCTGQTYDRSSIESWVNT-GNT---TCPVTRAPLTEFTLIP 69
PY + CP++ E+M DPVT TG T +R ++ W ++ GN+ CPVT LT L
Sbjct: 246 PYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT-ELSA 304
Query: 70 NHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRLR 129
N L+ +IQEW V N A + + A AL S S +++LR L+
Sbjct: 305 NVVLKTIIQEWKVRNEAARI-------KVAHAAL---------SLGGSESMVIDALRDLQ 348
Query: 130 QLARDSDYNRSLIASHDVRRIVLRIFDNRSSD 161
+YN+ + + +++ R RS D
Sbjct: 349 MTCEGKEYNKVQVREAGIIQLLDRYLTYRSKD 380
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P H+ CP+ +M +P G TYDR +IE W+ +T+ PVT PL LI N+TL
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKDTS-PVTNLPLPNKNLIANYTLY 834
Query: 75 RLIQEWCVANR 85
I EW R
Sbjct: 835 SAIMEWKSNKR 845
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P H+ CP+ +M +P G TYDR +IE W+ +T+ PVT PL LI N+TL
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKDTS-PVTNLPLPNKNLIANYTLY 834
Query: 75 RLIQEWCVANR 85
I EW R
Sbjct: 835 SAIMEWKSNKR 845
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P H+ CPI+ ++M +P G TY++ +I+ W+ N P+T P +L+PNH+L
Sbjct: 724 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 782
Query: 75 RLIQEW 80
I+EW
Sbjct: 783 SAIKEW 788
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P H+ CPI+ ++M +P G TY++ +I+ W+ N P+T P +L+PNH+L
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 784
Query: 75 RLIQEW 80
I+EW
Sbjct: 785 SAIKEW 790
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 18 YRCPISLELMRDPVTVCTGQTYDRSSIESWV----NTGN-TTCPVTRAPLTEFTLIPNHT 72
+ CP++ E+M DPVT+ G+T++R +IE W ++G +CP+T LT + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 73 LRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRLRQLA 132
LR I+EW N A ++ +Q SL + +A L +L +RQ+
Sbjct: 87 LRNTIEEWRSRNDA---AKLDIARQ--------SLF--LGNAETDI---LQALMHVRQIC 130
Query: 133 RDSDYNRSLIASHDVRRIVLRIFDNRSSDELSHESLALLVMFPLAESDCAAIAADLDKIG 192
R NR + + + +++ + + +S + +++L L + + + AI A+ D +
Sbjct: 131 RTIRSNRHGVRNSQLIHMIIDMLKS-TSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVR 189
Query: 193 YLSVLLSHQSLDVRVNSAALIEMVVAGTHSADLRSQVSSVEG 234
L LSH+ R A + ++ + S L ++ S+ G
Sbjct: 190 TLVKFLSHEPSKGR---EAAVSLLFELSKSEALCEKIGSIHG 228
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 15 PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLR 74
P ++ CPI+ ++M DP G TY+ +I W G+ T P+ L +L+PN LR
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 75 RLIQEW 80
IQEW
Sbjct: 414 SAIQEW 419
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 7 PLDLGIQI--PYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTE 64
PL + I P + CPIS ++M++P G TY+ W+N G P+T L
Sbjct: 285 PLQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLEN 344
Query: 65 FTLIPNHTLRRLIQEW 80
LIPN LR I++W
Sbjct: 345 RNLIPNLVLRSAIKDW 360
>AT1G56030.1 | Symbols: | RING/U-box superfamily protein |
chr1:20957098-20958550 REVERSE LENGTH=371
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 22 ISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHTLRRLIQE 79
+ ++M++P G TY+ +I+ W+NTG+ T P+T L+ F+ PN LR I+E
Sbjct: 311 LKTDVMKNPHMAADGFTYELEAIQKWINTGHRTSPMTNLKLSHFSFFPNRALRSAIEE 368
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 13 QIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPVTRAPLTEFTLIPNHT 72
+IP + CPIS LM DP+ V +G +Y+R+ + + G T P P T+IPN
Sbjct: 57 EIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTP----PPDFSTVIPNLA 112
Query: 73 LRRLIQEWCVANRAFGVERIPTPK 96
L+ I WC R F P PK
Sbjct: 113 LKSAIHSWC-ERRCF-----PPPK 130
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 251 RALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALATVELLCRVPAG 310
RA K AL++LC K+++ RAV +G L++ +ADF +++ + LL VP
Sbjct: 202 RAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVPES 261
Query: 311 CAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQMEAVAAGVLTQLLLLV 370
VP+LV+I+ + R E A LL LC ES + G + L+ L
Sbjct: 262 KPAIVEEG-GVPVLVEIVEVGTQRQKEMAVSILLQLCEESVVYRTMVAREGAIPPLVALS 320
Query: 371 QSDCT 375
Q+ +
Sbjct: 321 QAGTS 325
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 251 RALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALATVELLCRVPAG 310
R K + L+ LC ++Q+++RAV AGA L+D +A+ AE+A+ + L + G
Sbjct: 322 RGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDG 381
Query: 311 CAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERLQMEAVAAGVLTQLLLLV 370
+ LV+ I S + E+A LL LCS+S R + V G + L+ L
Sbjct: 382 KEAIVEEG-GIAALVEAIEDGSVKGKEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLS 440
Query: 371 QS 372
QS
Sbjct: 441 QS 442
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 13 QIPYHYRCPISLELMRDPVTVCTGQTYDRSSIESWVNTGNTTCPV----TRAPLTEFTLI 68
+ P + CPI+ LM DPV V +GQT++R S++ N + P T+ L+ T+I
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNL--SFAPKLHDGTQPDLS--TVI 64
Query: 69 PNHTLRRLIQEWCVANRAFGVERIPTPKQPAEPALVRSLLNQISSASASTHHRLNSLRRL 128
PN ++ I WC N+ +E P +VR+ ++ + S HR+ L
Sbjct: 65 PNLAMKSTILSWCDRNK---MEHPRPPDYAYVEGVVRTRMDSLPPGSG---HRIAKSEIL 118
Query: 129 RQLARDSDYN 138
+A +S+ N
Sbjct: 119 PPVAENSNSN 128
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 251 RALKVGVKALFALCLVKQSRQRAVAAGAPAVLIDRLADFEKCDAERALATVELLCRVPA- 309
RA K AL++LC +++ RAV +G L++ + DFE +++ + LL P
Sbjct: 200 RAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPES 259
Query: 310 --GCAEFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSES 350
E G VP+LV+I+ + R E + LL LC ES
Sbjct: 260 KPAVVEEGG----VPVLVEIVEAGTQRQKEISVSILLQLCEES 298