Miyakogusa Predicted Gene

Lj4g3v0619950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0619950.1 Non Chatacterized Hit- tr|I1KM07|I1KM07_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.61,0,Carboxyl_trans,Carboxyl transferase; seg,NULL;
ClpP/crotonase,NULL; ACETYL-COA CARBOXYLASE CARBOXYLT,CUFF.47647.1
         (556 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34030.1 | Symbols: MCCB | 3-methylcrotonyl-CoA carboxylase |...   888   0.0  

>AT4G34030.1 | Symbols: MCCB | 3-methylcrotonyl-CoA carboxylase |
           chr4:16301298-16303949 FORWARD LENGTH=587
          Length = 587

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/546 (78%), Positives = 485/546 (88%), Gaps = 8/546 (1%)

Query: 19  RRGFCLGILPHS--------NGGATAMEDLLSQLQSHVHKALAGGGAEAVKRNTSRNKLL 70
           ++GFC+GILP          +  + AME +LS+L+SH+ K LAGGG EAVKRN SRNKLL
Sbjct: 42  QKGFCVGILPDGVDRNSEAFSSNSIAMEGILSELRSHIKKVLAGGGEEAVKRNRSRNKLL 101

Query: 71  PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGG 130
           PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGG++TGIGP+HGR+CMF+ANDPTVKGG
Sbjct: 102 PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGIITGIGPIHGRICMFMANDPTVKGG 161

Query: 131 TYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSA 190
           TYYPIT+KKHLRAQEIA++C+LPC+YLVDSGGA+LPKQA+VFPD+ENFGR+FYN+++MS+
Sbjct: 162 TYYPITIKKHLRAQEIAARCRLPCIYLVDSGGAYLPKQAEVFPDKENFGRVFYNESVMSS 221

Query: 191 EGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGA 250
           +GIPQIA+VLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGA
Sbjct: 222 DGIPQIAIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGA 281

Query: 251 TVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNEL 310
           TVHC  SGVSDYFAQDE H LA+GRNI+KNLHMA K  +     + +  YKEPLYD+NEL
Sbjct: 282 TVHCTVSGVSDYFAQDELHGLAIGRNIVKNLHMAAKQGMEGTFGSKNLVYKEPLYDINEL 341

Query: 311 RSIAPTDLKKQFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGNNGILF 370
           RSIAP D K+QFDVRS+IARIVDGSEFDEFKK YGTTLVTGFARIYGQ VGIIGNNGILF
Sbjct: 342 RSIAPVDHKQQFDVRSIIARIVDGSEFDEFKKQYGTTLVTGFARIYGQTVGIIGNNGILF 401

Query: 371 NESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKI 430
           NESALKGAHFIE+C+QR IPLVFLQNITGFMVGSR+EANGIAK+GAKMVMAVSCAKVPKI
Sbjct: 402 NESALKGAHFIELCSQRKIPLVFLQNITGFMVGSRAEANGIAKAGAKMVMAVSCAKVPKI 461

Query: 431 TIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQW 490
           TII G SFGAGNYAMCGRAYSP+FMF+WPNARI +MGGAQAAGVL+QIE+  KK+QGI+W
Sbjct: 462 TIITGASFGAGNYAMCGRAYSPDFMFIWPNARIGIMGGAQAAGVLTQIERATKKRQGIKW 521

Query: 491 SXXXXXXXXXXXXXAYEVEGSPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIEDTK 550
           +             AYE E +PYYSTARLWDDG+IDP DTRKV+GL +SA+LNR +EDT+
Sbjct: 522 TEEEEEAFKKKTVDAYEREANPYYSTARLWDDGVIDPCDTRKVLGLCLSAALNRPLEDTR 581

Query: 551 FGVFRM 556
           FGVFRM
Sbjct: 582 FGVFRM 587