Miyakogusa Predicted Gene

Lj4g3v0575720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0575720.1 Non Chatacterized Hit- tr|B9R7F1|B9R7F1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,52.46,0.00000000004,seg,NULL; DUF829,Protein of unknown function
DUF829, TMEM53; UNCHARACTERIZED,Protein of unknown func,CUFF.47623.1
         (418 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G15695.1 | Symbols:  | Protein of unknown function DUF829, tr...   408   e-114
AT5G44250.1 | Symbols:  | Protein of unknown function DUF829, tr...   345   4e-95
AT5G44250.2 | Symbols:  | Protein of unknown function DUF829, tr...   261   9e-70

>AT2G15695.1 | Symbols:  | Protein of unknown function DUF829,
           transmembrane 53 | chr2:6834194-6836336 REVERSE
           LENGTH=420
          Length = 420

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/417 (51%), Positives = 274/417 (65%), Gaps = 23/417 (5%)

Query: 22  IYWGRKHATDFR-----------GIVVIFAWVSVPQTLLQDFVNLYSSLGWNSLVCYAHY 70
           +YWG+K   +             G+VVIF W S+ +  L +FV+LYSSLGWNSLVC A +
Sbjct: 7   VYWGKKLDKEMEDAAVVDGGGSNGVVVIFVWSSINENQLMNFVDLYSSLGWNSLVCRADF 66

Query: 71  LSAFRDESTVPLAFCVVDELIEELKTKSCPVVFAAFSAGSKACLYKVLQLIDGRCETPHC 130
           L+A   E  + LAF ++ EL+EELK++ CPV+F AFS   KAC+YKVLQ+I   CE    
Sbjct: 67  LTAVYPEMALSLAFHLLSELVEELKSRPCPVIFLAFSGAPKACMYKVLQVIMDDCEAQIH 126

Query: 131 LHNYHLLRNCVSGHIYDSGPLDVTSDFGFRFALHPSMAKVPXXXXXXXXXXXXXXXXXDA 190
             +  L+R C+SGH+YDSGPLD TSD   +FALHP++ ++                  D 
Sbjct: 127 PDDSQLVRTCLSGHVYDSGPLDFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGISSGLDG 186

Query: 191 LYLTSFESQAAEHWQALYSSVNFGAPFLILCSENDDLVRHQSVYDFAQRLRNLSADVNLV 250
           LYLT FESQ +E+WQALYSSV  GAP+LILCSEND+L   Q +  F  +L+ L  +V +V
Sbjct: 187 LYLTRFESQRSEYWQALYSSVEIGAPYLILCSENDELAPLQVISSFTHQLQELGGEVKVV 246

Query: 251 NWSNSPHVGHYKHHPIQYRAAVSQFLEKSASIYSQKVKLEQERIGTDGMHDEISELICDL 310
            W NSPH GHY H+PIQYRA +S FLEK+ S++  K++   ER  T   HDEISELICDL
Sbjct: 247 KWKNSPHAGHYAHNPIQYRAVISNFLEKAISVHLHKIRQLGERAHT---HDEISELICDL 303

Query: 311 QKVAINSNQSLRRVAVGPTDHFFLPSSA---GQYKDRESGTPQEEQKEKPVCVPSFP-SI 366
           QKVA+NSNQSLRRVA GP DHFFLPSSA       + +  + QEEQ+E+    P  P SI
Sbjct: 304 QKVAVNSNQSLRRVATGPCDHFFLPSSAPYQSNSNNSDPSSSQEEQRERSSFRPLQPTSI 363

Query: 367 SANSVLGQFLFDVCVPKNVDGWDVKFSG-----NRLCASASRHSPLRGIKRIGRSRL 418
           +A+SVLGQFLFD CVPKN++GWD++F+G         +S+ ++S L   KR  RSRL
Sbjct: 364 NAHSVLGQFLFDSCVPKNIEGWDIRFAGCLNGQPYATSSSRKNSNLGFKKRFFRSRL 420


>AT5G44250.1 | Symbols:  | Protein of unknown function DUF829,
           transmembrane 53 | chr5:17823876-17825620 REVERSE
           LENGTH=403
          Length = 403

 Score =  345 bits (884), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 179/403 (44%), Positives = 250/403 (62%), Gaps = 11/403 (2%)

Query: 21  NIYWGRKH--ATDFRGIVVIFAWVSVPQTLLQDFVNLYSSLGWNSLVCYAHYLSAFRDES 78
           N YW +K+    +   IVV+FAW+S  +  L++ V+LYSSL W+SLVC++ +L+ F  + 
Sbjct: 7   NYYWRKKNNNGGESEAIVVVFAWMSSEERNLKNHVDLYSSLLWDSLVCHSQFLNMFLPDK 66

Query: 79  TVPLAFCVVDELIEELKTKSCPVVFAAFSAGSKACLYKVLQLIDGRCETPHCLHNYHLLR 138
              LA  VV EL++ELK K  P+VFA+FS G  AC+YKVLQ+++G CET     +  L+R
Sbjct: 67  AADLASNVVSELVKELKAKPVPLVFASFSGGPNACMYKVLQILEGTCETGLNPDDCRLVR 126

Query: 139 NCVSGHIYDSGPLDVTSDFGFRFALHPSMAKVPXXXXXXXXXXXXXXXXXDALYLTSFES 198
           NC+SG IYDS P+D TSD G R A+HP+  K+                  D ++L  FES
Sbjct: 127 NCISGFIYDSCPVDFTSDLGARLAVHPTTLKMSSPPKPFVWAANGIASSLDYVFLNRFES 186

Query: 199 QAAEHWQALYSSVNFGAPFLILCSENDDLVRHQSVYDFAQRLRNLSADVNLVNWSNSPHV 258
           Q AE+WQ LYS++    P+LILCSENDDL  +Q++++FA RL+ L  +V LV W++SPH 
Sbjct: 187 QRAEYWQTLYSTIIMRVPYLILCSENDDLAPYQTIHNFATRLQELGGNVKLVKWNDSPHC 246

Query: 259 GHYKHHPIQYRAAVSQFLEKSASIYSQKVKLEQERIGTDGMHDEISELICDLQKVAINSN 318
           GHY+++ + Y+AAVS+FL K+AS+YSQK +           HDEI+E I  L +     N
Sbjct: 247 GHYRYNQVDYKAAVSEFLSKAASVYSQKTRSLDREAMKGTCHDEITEPIQSLGQSTSGLN 306

Query: 319 QSLRRVAVGPTDHFFLPSSAGQYKDRESGTPQEEQKEKPVCVPSF---PSISANSVLGQF 375
           +S     +  TDHFF+PS+ G Y  R+ G  Q+E K+  +C+ +     S+  N VLGQ 
Sbjct: 307 RSFNGTPLVTTDHFFVPSTVGYYVGRDGGYVQDEHKQDLICLSNTQTNESVKPNGVLGQI 366

Query: 376 LFDVCVPKNVDGWDVKFSGNRLCASASRHSPLRGIKRIGRSRL 418
           LFDV +PKNV+ WD+K S        SR  P  G + I RSRL
Sbjct: 367 LFDVYIPKNVEDWDIKLSE----TGRSRRRP--GKRFIRRSRL 403


>AT5G44250.2 | Symbols:  | Protein of unknown function DUF829,
           transmembrane 53 | chr5:17823876-17825153 REVERSE
           LENGTH=302
          Length = 302

 Score =  261 bits (666), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 135/308 (43%), Positives = 187/308 (60%), Gaps = 9/308 (2%)

Query: 114 LYKVLQLIDGRCETPHCLHNYHLLRNCVSGHIYDSGPLDVTSDFGFRFALHPSMAKVPXX 173
           +YKVLQ+++G CET     +  L+RNC+SG IYDS P+D TSD G R A+HP+  K+   
Sbjct: 1   MYKVLQILEGTCETGLNPDDCRLVRNCISGFIYDSCPVDFTSDLGARLAVHPTTLKMSSP 60

Query: 174 XXXXXXXXXXXXXXXDALYLTSFESQAAEHWQALYSSVNFGAPFLILCSENDDLVRHQSV 233
                          D ++L  FESQ AE+WQ LYS++    P+LILCSENDDL  +Q++
Sbjct: 61  PKPFVWAANGIASSLDYVFLNRFESQRAEYWQTLYSTIIMRVPYLILCSENDDLAPYQTI 120

Query: 234 YDFAQRLRNLSADVNLVNWSNSPHVGHYKHHPIQYRAAVSQFLEKSASIYSQKVKLEQER 293
           ++FA RL+ L  +V LV W++SPH GHY+++ + Y+AAVS+FL K+AS+YSQK +     
Sbjct: 121 HNFATRLQELGGNVKLVKWNDSPHCGHYRYNQVDYKAAVSEFLSKAASVYSQKTRSLDRE 180

Query: 294 IGTDGMHDEISELICDLQKVAINSNQSLRRVAVGPTDHFFLPSSAGQYKDRESGTPQEEQ 353
                 HDEI+E I  L +     N+S     +  TDHFF+PS+ G Y  R+ G  Q+E 
Sbjct: 181 AMKGTCHDEITEPIQSLGQSTSGLNRSFNGTPLVTTDHFFVPSTVGYYVGRDGGYVQDEH 240

Query: 354 KEKPVCVPSF---PSISANSVLGQFLFDVCVPKNVDGWDVKFSGNRLCASASRHSPLRGI 410
           K+  +C+ +     S+  N VLGQ LFDV +PKNV+ WD+K S        SR  P  G 
Sbjct: 241 KQDLICLSNTQTNESVKPNGVLGQILFDVYIPKNVEDWDIKLSE----TGRSRRRP--GK 294

Query: 411 KRIGRSRL 418
           + I RSRL
Sbjct: 295 RFIRRSRL 302