Miyakogusa Predicted Gene
- Lj4g3v0575700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0575700.1 Non Chatacterized Hit- tr|F6HQC4|F6HQC4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.07,4e-19,seg,NULL; CDI,Cyclin-dependent kinase inhibitor; no
description,NULL,CUFF.47620.1
(192 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49620.1 | Symbols: KRP7, ICN6, ICK5 | Cyclin-dependent kinas... 74 7e-14
AT5G48820.1 | Symbols: KRP3, ICK6 | inhibitor/interactor with cy... 66 1e-11
AT5G48820.2 | Symbols: ICK6 | inhibitor/interactor with cyclin-d... 66 1e-11
AT3G19150.1 | Symbols: KRP6, ICK4, ACK1 | KIP-related protein 6 ... 64 5e-11
AT3G24810.1 | Symbols: ICK3, KRP5 | Cyclin-dependent kinase inhi... 62 2e-10
AT2G32710.1 | Symbols: KRP4, ACK2, ICK7 | Cyclin-dependent kinas... 56 1e-08
AT2G32710.2 | Symbols: KRP4, ACK2, ICK7 | Cyclin-dependent kinas... 56 1e-08
AT2G23430.1 | Symbols: ICK1, KRP1 | Cyclin-dependent kinase inhi... 50 1e-06
AT3G50630.1 | Symbols: KRP2, ICK2 | KIP-related protein 2 | chr3... 47 9e-06
>AT1G49620.1 | Symbols: KRP7, ICN6, ICK5 | Cyclin-dependent kinase
inhibitor family protein | chr1:18365692-18366559
REVERSE LENGTH=195
Length = 195
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 9/76 (11%)
Query: 125 SEELVFPEKYSAAVSELRKMKK---------TPPMAEIEEFFATTERNEQKRFAEKYNFD 175
SE L + +A +E+R +K +P AE+++FF+ ER EQKRF EKYN+D
Sbjct: 118 SENLGETAEMDSATTEMRDQRKTEKKKKMEKSPTQAELDDFFSAAERYEQKRFTEKYNYD 177
Query: 176 IVRDMPLEGRYQWVRL 191
IV D PLEGRYQWV L
Sbjct: 178 IVNDTPLEGRYQWVSL 193
>AT5G48820.1 | Symbols: KRP3, ICK6 | inhibitor/interactor with
cyclin-dependent kinase | chr5:19792608-19794346 REVERSE
LENGTH=222
Length = 222
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 148 PPMAEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWVRL 191
P +E+EEFFA E+ +Q+ F EKYNFDIV D+PL GRY+WV++
Sbjct: 177 PTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQV 220
>AT5G48820.2 | Symbols: ICK6 | inhibitor/interactor with
cyclin-dependent kinase | chr5:19792608-19794346 REVERSE
LENGTH=240
Length = 240
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 148 PPMAEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWVRL 191
P +E+EEFFA E+ +Q+ F EKYNFDIV D+PL GRY+WV++
Sbjct: 195 PTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQV 238
>AT3G19150.1 | Symbols: KRP6, ICK4, ACK1 | KIP-related protein 6 |
chr3:6616628-6617655 REVERSE LENGTH=196
Length = 196
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query: 144 MKKTPPMAEIEEFFATTER--NEQKRFAEKYNFDIVRDMPLEGRYQWVRL 191
++KTP AEIE+ F+ E +++K+F EKYNFDIV D PLEGRY+W RL
Sbjct: 147 VRKTPTAAEIEDLFSELESQDDKKKQFIEKYNFDIVNDEPLEGRYKWDRL 196
>AT3G24810.1 | Symbols: ICK3, KRP5 | Cyclin-dependent kinase
inhibitor family protein | chr3:9060990-9061742 FORWARD
LENGTH=189
Length = 189
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 151 AEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWVRL 191
+EIE+FFA+ E+ +Q+ F +KYNFDIV D PL GRY+WV++
Sbjct: 147 SEIEDFFASAEQQQQRFFIQKYNFDIVSDNPLPGRYEWVKV 187
>AT2G32710.1 | Symbols: KRP4, ACK2, ICK7 | Cyclin-dependent kinase
inhibitor family protein | chr2:13873496-13875350
FORWARD LENGTH=289
Length = 289
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 142 RKMKKTPPMAEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWVRL 191
R ++ P E++EFF+ E +QK+F EKYNFD V + PL GR++W ++
Sbjct: 238 RSHRRRPTTPEMDEFFSGAEEEQQKQFIEKYNFDPVNEQPLPGRFEWTKV 287
>AT2G32710.2 | Symbols: KRP4, ACK2, ICK7 | Cyclin-dependent kinase
inhibitor family protein | chr2:13873496-13875350
FORWARD LENGTH=286
Length = 286
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 142 RKMKKTPPMAEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWVRL 191
R ++ P E++EFF+ E +QK+F EKYNFD V + PL GR++W ++
Sbjct: 235 RSHRRRPTTPEMDEFFSGAEEEQQKQFIEKYNFDPVNEQPLPGRFEWTKV 284
>AT2G23430.1 | Symbols: ICK1, KRP1 | Cyclin-dependent kinase
inhibitor family protein | chr2:9977020-9977921 REVERSE
LENGTH=191
Length = 191
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 144 MKKTPPMAEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWVRLH 192
M + P +EIE+FF E+ +++F +KYNFD ++ PLEGRY+WV+L
Sbjct: 143 MTEMPTESEIEDFFVEAEKQLKEKFKKKYNFDFEKEKPLEGRYEWVKLE 191
>AT3G50630.1 | Symbols: KRP2, ICK2 | KIP-related protein 2 |
chr3:18800508-18801366 FORWARD LENGTH=209
Length = 209
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 125 SEELVFPEKYSAAVSEL---RKMKK----TPPMAEIEEFFATTERNEQKRFAE---KYNF 174
SEE + + S AV ++ R+++K T AE+E+FF E++ + + E KYNF
Sbjct: 130 SEESMNMDSSSVAVEDVESRRRLRKSLHETVKEAELEDFFQVAEKDLRNKLLECSMKYNF 189
Query: 175 DIVRDMPL-EGRYQWVRLH 192
D +D PL GRY+WV+L+
Sbjct: 190 DFEKDEPLGGGRYEWVKLN 208