Miyakogusa Predicted Gene

Lj4g3v0575010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0575010.1 Non Chatacterized Hit- tr|I1KDQ8|I1KDQ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,47.37,0.00007,
,CUFF.47593.1
         (55 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48720.1 | Symbols:  | unknown protein; Has 229 Blast hits to...    48   1e-06

>AT1G48720.1 | Symbols:  | unknown protein; Has 229 Blast hits to
          229 proteins in 10 species: Archae - 0; Bacteria - 0;
          Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0;
          Other Eukaryotes - 0 (source: NCBI BLink). |
          chr1:18018148-18018441 FORWARD LENGTH=97
          Length = 97

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)

Query: 1  MASNNLPGVNLPVLTDKNWDRWNSQMKVLFGFQDVLDVIENGF 43
          MASNN+P   +PVLT  N+D W+ +MK + G  DV +++E GF
Sbjct: 1  MASNNVP-FQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGF 42