Miyakogusa Predicted Gene

Lj4g3v0526630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0526630.1 tr|G7JNK6|G7JNK6_MEDTR Sorting nexin-16
OS=Medicago truncatula GN=MTR_4g087210 PE=4 SV=1,73.6,0,no
description,Phox homologous domain; PX domain,Phox homologous domain;
PX,Phox homologous domain; ,CUFF.47565.1
         (739 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G15900.1 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   603   e-172
AT1G15240.2 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   290   2e-78
AT1G15240.3 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   260   3e-69
AT1G15240.1 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   109   9e-24

>AT2G15900.1 | Symbols:  | Phox-associated domain;Phox-like;Sorting
           nexin, C-terminal | chr2:6927390-6932535 FORWARD
           LENGTH=994
          Length = 994

 Score =  603 bits (1554), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 345/721 (47%), Positives = 437/721 (60%), Gaps = 68/721 (9%)

Query: 37  SQGTEMVLAKKSDHGETSLQNNTLHEESLQVRPADWARVLDAATQRRTEILMPENLENMW 96
           SQ   M L K  +    ++ N+   +  +Q   ADWAR L+ ATQRRTE+L PENLENMW
Sbjct: 312 SQAKNMNLTKAIEQKSPNI-NDRHPDLHVQQHSADWARSLEVATQRRTEVLRPENLENMW 370

Query: 97  AKGKNYKRKENKIMKAGFQDLPAKSPATDSSTPHKKLAPETLVSKRGKYGIVEGKSSLPP 156
            KG+NY++KE K          AK  A        +L P+    K+ +  + E       
Sbjct: 371 TKGRNYQKKEYKKSLKKGSSTGAKENAV------AQLPPKVSTDKQSQAQMAE------- 417

Query: 157 MPALGSDPLQSAGNTNSSEYSPNPDKELSFEGEIGVDKVKGIEKDLASDGYKNPLKRSNS 216
                   L   G+               +E +        + K+  SDG KN LKRSNS
Sbjct: 418 --EFSKSSLHDGGHQ-------------IYEAD--------VRKESRSDGNKNRLKRSNS 454

Query: 217 ASALGILPKHG--------GSIISEFYNPEFERHSEGF-RGKSSSDMIIRKEGQLFPKLR 267
            S L + P+          G +I+EFY  +F +H++ +     S  +++ KEGQ   KL+
Sbjct: 455 TSDLNLRPETSLALLGVSEGPLITEFYTTDFIKHNDNYISDNKSQSIVLHKEGQHCLKLK 514

Query: 268 CRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTLHLPPK 327
           CRV+GAYFEK GS  FAVYSIAVTD +N+TWFVKRRY NFERLHR LK+IPNY L LPPK
Sbjct: 515 CRVLGAYFEKQGSKSFAVYSIAVTDVENKTWFVKRRYSNFERLHRQLKEIPNYNLQLPPK 574

Query: 328 RIFSSSTDDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFFXXXXXXXXXXXXXXXMKT 387
           RIFSSST+DAFVH+RCIQLDKYLQDLL IANVAEQHEVWDF                MKT
Sbjct: 575 RIFSSSTEDAFVHRRCIQLDKYLQDLLCIANVAEQHEVWDFLSAASKNYSFGKSSSVMKT 634

Query: 388 LXXXXXXXXXXXXRQFKGVSDGLMRKVVRSPILINEGSSTSTTWNMEWNADEIDRSIPGQ 447
           L            RQFKGVSDGLMRKVV SP+   +    + T ++ W+ +EI   +  +
Sbjct: 635 LAVNVDDAMDDIVRQFKGVSDGLMRKVVGSPL---DEHDHAPTRHLSWSVNEISTQLSRE 691

Query: 448 STTDSVIS--SDNEEGEKNINFGQENVDREVAQGDGWQSDNALISKDYQTSAINH-AEES 504
           S T+S+ S  SD E+ +K +    +   R  ++ +GW SDN L SK      +    E  
Sbjct: 692 SATESMHSSISDTEDIDK-LGENTQGEGRFDSEANGWHSDNELDSKYVPPRVVRRLGEPE 750

Query: 505 SNMDFDRNDVTATNSI-----LVHDN-----LEDPVGVPPEWAPPNVSVPLLNLVDKIFQ 554
           S+     ND  A + +       H +     +++P G+ PEW PPNVSVP+LNLVDK+FQ
Sbjct: 751 SSPSEKENDFKAKSQVRGSTDFQHADPLTALVQNPHGI-PEWMPPNVSVPILNLVDKVFQ 809

Query: 555 LKKRGWLRRQVFWISKQILQLVMEDAIDDWLLRQINWLRREDTIAHGIRWIQDVLWPGGT 614
           L +RGWLRRQVFWISKQILQLVMEDA+DD L+R+I WLR EDTIA GIRW QD+LWP G 
Sbjct: 810 LNRRGWLRRQVFWISKQILQLVMEDAVDDLLMREICWLRNEDTIAQGIRWAQDILWPNGV 869

Query: 615 FFLKIGSSQMVSSGSD--QKHSQTRSGPGGSNIMKSESGSFEQQLEAARRASDIKKLLFD 672
           FF ++  SQ  S  +D  +K  Q     GG  + K    SFEQQLEA RRAS+IKK LFD
Sbjct: 870 FFTRLNDSQEASDETDPSEKTYQMAGQLGGMKVTK--PSSFEQQLEAFRRASEIKKFLFD 927

Query: 673 GTPTTLVSLIGHKQYRRCARDIYYFSQSTICVKQLAYAILELLLVSIFPETRNVVLSVRE 732
           G PT LVSL+GH QYRRCARDI+YF+QS IC+KQL +AILELLL S+FPE ++++  +RE
Sbjct: 928 GAPTALVSLVGHNQYRRCARDIFYFTQSNICIKQLTFAILELLLRSVFPELQDLLRDIRE 987

Query: 733 S 733
           +
Sbjct: 988 N 988


>AT1G15240.2 | Symbols:  | Phox-associated domain;Phox-like;Sorting
           nexin, C-terminal | chr1:5243799-5248604 FORWARD
           LENGTH=1020
          Length = 1020

 Score =  290 bits (742), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 164/464 (35%), Positives = 237/464 (51%), Gaps = 79/464 (17%)

Query: 263 FPKLRCRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTL 322
           F KLRC V+GA   K  S  FAVYS+AVTD  N +W +KRR+R+FE LHR LK  P Y L
Sbjct: 610 FAKLRCEVLGANIVKGSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELHRRLKVFPEYKL 669

Query: 323 HLPPKRIFSSSTDDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFFXXXXXXXXXXXXX 382
           HLPPK   S+  D   + +RC+ LD+Y++ LL +  ++   EVWDF              
Sbjct: 670 HLPPKHFLSTGVDIPVIQERCVLLDEYIKKLLQLQRISGSIEVWDFLSVDSQTYAFSSSF 729

Query: 383 XXMKTLXXXXXXXXXXXXRQFKGVSDGLMRKVVRSPILINEGSSTSTTWNMEWNADEIDR 442
             ++TL                                +N+ S+ +T      N   + +
Sbjct: 730 SIIETLTVKP----------------------------VNKTSTVAT------NIASMTQ 755

Query: 443 SIPGQSTTDSVISSDNEEGEKNINFGQENVDREVAQGDGWQSDNALISKDYQTSAINHAE 502
           + PG       +SS+N    +N+                    N ++  D ++   N   
Sbjct: 756 AAPGPLPRRENLSSENGISGQNMR-------------------NNVMVDDVKSKVKNLGN 796

Query: 503 ESSNM-DFDRNDVTATNSILVHDNLEDPV---GVPPEWAPPNVSVPLLNLVDKIFQLKKR 558
           +     D D  +      + V     D V   G+P EW PP +++PLL+LVD +FQL++ 
Sbjct: 797 DHVKTPDVDVRNRKENGGLKVGTQHADDVACAGLPTEWVPPKLTLPLLDLVDVVFQLQEG 856

Query: 559 GWLRRQVFWISKQILQLVMEDAIDDWLLRQINWLRREDTIAHGIRWIQDVLWPGGTFFLK 618
           GW+RR+ FW++KQILQL M DA+DDW+L +I  LRR   +A GI+ ++ +LWP G F  K
Sbjct: 857 GWIRRKAFWVAKQILQLGMGDALDDWVLEKICLLRRGTVVASGIQRVEQILWPDGVFMTK 916

Query: 619 IGSSQMVSSGSDQKHSQTRSGPGGSNIMKSESGSFEQQLEAARRASDIKKLLFDGTPTTL 678
               Q  SS S++                      EQ+ EA RRA  + +L+ +  P T+
Sbjct: 917 HPKRQQQSSISEE----------------------EQKQEAERRAKFVHELMIEKAPATI 954

Query: 679 VSLIGHKQYRRCARDIYYFSQSTICVKQLAYAILELLLVSIFPE 722
           VSLIG K+Y +CA D+Y+F QS++C+KQLA+ ILELLL+S FPE
Sbjct: 955 VSLIGQKEYEQCAEDLYFFLQSSVCLKQLAFDILELLLLSAFPE 998



 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 29/35 (82%)

Query: 72  WARVLDAATQRRTEILMPENLENMWAKGKNYKRKE 106
           W  VLD  +QR+TE L PE+LE++WAKG+NYK+KE
Sbjct: 394 WGDVLDMMSQRKTETLAPEHLESVWAKGRNYKKKE 428


>AT1G15240.3 | Symbols:  | Phox-associated domain;Phox-like;Sorting
            nexin, C-terminal | chr1:5243799-5248498 FORWARD
            LENGTH=1012
          Length = 1012

 Score =  260 bits (664), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 228/470 (48%), Gaps = 87/470 (18%)

Query: 263  FPKLRCRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTL 322
            F KLRC V+GA   K  S  FAVYS+AVTD  N +W +KRR+R+FE LHR LK  P Y L
Sbjct: 610  FAKLRCEVLGANIVKGSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELHRRLKVFPEYKL 669

Query: 323  HLPPKRIFSSSTDDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFFXXXXXXXXXXXXX 382
            HLPPK   S+  D   + +RC+ LD+Y++ LL +  ++   EVWDF              
Sbjct: 670  HLPPKHFLSTGVDIPVIQERCVLLDEYIKKLLQLQRISGSIEVWDFLSVDSQTYAFSSSF 729

Query: 383  XXMKTLXXXXXXXXXXXXRQFKGVSDGLMRKVVRSPILINEGSSTSTTWNMEWNADEIDR 442
              ++TL                                +N+ S+ +T      N   + +
Sbjct: 730  SIIETLTVKP----------------------------VNKTSTVAT------NIASMTQ 755

Query: 443  SIPGQSTTDSVISSDNEEGEKNINFGQENVDREVAQGDGWQSDNALISKDYQTSAINHAE 502
            + PG       +SS+N    +N+                    N ++  D ++   N   
Sbjct: 756  AAPGPLPRRENLSSENGISGQNMR-------------------NNVMVDDVKSKVKNLGN 796

Query: 503  ESSNM-DFDRNDVTATNSILVHDNLEDPV---GVPPEWAPPNVSVPLLNLVDKIFQLKKR 558
            +     D D  +      + V     D V   G+P EW PP +++PLL+LVD +FQL++ 
Sbjct: 797  DHVKTPDVDVRNRKENGGLKVGTQHADDVACAGLPTEWVPPKLTLPLLDLVDVVFQLQEG 856

Query: 559  GWLRRQVFWISKQILQLVMEDAIDDWLLRQINWLRREDTIAHGIRWIQDVLWPGGTFFLK 618
            GW+RR+ FW++KQILQL M DA+DDW+L +I  LRR   +A GI+ ++ +LWP G F  K
Sbjct: 857  GWIRRKAFWVAKQILQLGMGDALDDWVLEKICLLRRGTVVASGIQRVEQILWPDGVFMTK 916

Query: 619  IGSSQMVSSGSDQKHSQTRSGPGGSNIMKSESGSFEQQLEAARRASDIKKLLFDGTPTTL 678
                Q  SS S++                      EQ+ EA RRA  + +L+ +  P T+
Sbjct: 917  HPKRQQQSSISEE----------------------EQKQEAERRAKFVHELMIEKAPATI 954

Query: 679  VSLIGHKQYRRCARDIYYFSQSTI--------CVKQLAYAILELLLVSIF 720
            VSLIG K+Y +CA D+Y+F Q  I        C+      I++++LVS+ 
Sbjct: 955  VSLIGQKEYEQCAEDLYFFLQVNIPLDFRFVRCLHAFDDFIVKIILVSVI 1004



 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 29/35 (82%)

Query: 72  WARVLDAATQRRTEILMPENLENMWAKGKNYKRKE 106
           W  VLD  +QR+TE L PE+LE++WAKG+NYK+KE
Sbjct: 394 WGDVLDMMSQRKTETLAPEHLESVWAKGRNYKKKE 428


>AT1G15240.1 | Symbols:  | Phox-associated domain;Phox-like;Sorting
           nexin, C-terminal | chr1:5243799-5246495 FORWARD
           LENGTH=706
          Length = 706

 Score =  109 bits (272), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 60/89 (67%)

Query: 263 FPKLRCRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTL 322
           F KLRC V+GA   K  S  FAVYS+AVTD  N +W +KRR+R+FE LHR LK  P Y L
Sbjct: 610 FAKLRCEVLGANIVKGSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELHRRLKVFPEYKL 669

Query: 323 HLPPKRIFSSSTDDAFVHQRCIQLDKYLQ 351
           HLPPK   S+  D   + +RC+ LD+Y++
Sbjct: 670 HLPPKHFLSTGVDIPVIQERCVLLDEYIK 698



 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 29/35 (82%)

Query: 72  WARVLDAATQRRTEILMPENLENMWAKGKNYKRKE 106
           W  VLD  +QR+TE L PE+LE++WAKG+NYK+KE
Sbjct: 394 WGDVLDMMSQRKTETLAPEHLESVWAKGRNYKKKE 428