Miyakogusa Predicted Gene

Lj4g3v0510210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0510210.1 Non Chatacterized Hit- tr|B9RV94|B9RV94_RICCO
Signal recognition particle 54 kD protein, putative
OS,78.7,0,SRP54,Signal recognition particle, SRP54 subunit, GTPase
domain; SRP54,Signal recognition particle, ,CUFF.47541.1
         (482 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48900.1 | Symbols:  | Signal recognition particle, SRP54 sub...   732   0.0  
AT1G48900.2 | Symbols:  | Signal recognition particle, SRP54 sub...   671   0.0  
AT1G15310.1 | Symbols: ATHSRP54A, SRP54-1 | signal recognition p...   654   0.0  
AT5G49500.1 | Symbols:  | Signal recognition particle, SRP54 sub...   649   0.0  
AT5G03940.1 | Symbols: FFC, 54CP, CPSRP54, SRP54CP | chloroplast...   176   2e-44
AT5G66970.1 | Symbols:  | P-loop containing nucleoside triphosph...   116   4e-26
AT2G45770.1 | Symbols: CPFTSY, FRD4 | signal recognition particl...   115   9e-26
AT2G45770.2 | Symbols: CPFTSY | signal recognition particle rece...   108   1e-23
AT4G30600.1 | Symbols:  | signal recognition particle receptor a...    92   8e-19

>AT1G48900.1 | Symbols:  | Signal recognition particle, SRP54
           subunit protein | chr1:18084972-18087743 REVERSE
           LENGTH=495
          Length = 495

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/494 (72%), Positives = 408/494 (82%), Gaps = 17/494 (3%)

Query: 2   VVLQQLGESISRALQQMSNATMINEKVLNECLNEITRALLQSGVEFELVRDMQTNIKKIV 61
           +VL +LG  I+RA+QQMSN T+I+EK LNECLNEITRALLQS V F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 62  NLDDLTAGHNKRKIFCQAVIDELCKLLDSGKPSHTPKRRKASVVMIVGLQGSGKTTTCTK 121
           NL+DL AGHNKR+I  QA+  ELCK+LD GKP+  PK+ KASVVM VGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 122 YGHYHQKKGWKPALVCADTFRADAFDQLKQNATKAKIPYYGSYIESDPVKIAVEGVERFK 181
           Y +YHQKKG+KPALVCADTFRA AFDQLKQNATKAKIP+YGSY ESDPVKIAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 182 KENCDLIIVDTSGRHKQEAALFEEMRQVLEATKPDLVIFVMDSSIGXXXXXXXXXXXXSV 241
           KENCDLIIVDTSGRHKQEA+LFEEMRQV EATKPDLVIFVMDSSIG            SV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 242 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVEPFVSRLLGMEDL 301
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV+PFVSRLLGM D 
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 302 SGFMDKIQEVVPMDQRHELLQKLSKGIYTLRIMYKQFQNFLEIGPIDQVFSALPCFGSEL 361
           SGF+DK+QEVVP DQ+ ELL+KLS+G +TLRIMY QFQN L +GP+ +VFS LP   +E+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 362 MEKGREKENQAKIKRYMRMMDSMTNEELDTSNPKLMNESRMMRVAQGSGCHVREVVEMLA 421
           M KG EKE+QAKIKRYM MMDSMTN+ELD+SNPK+ NESRMMR+A+GSG  VREV+EML 
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420

Query: 422 EYKYLARMWRKQKGLKSP-NGDFSA----------------SLLNQLGGMRGLRRLMTPM 464
           EYK LA++W K KGLK P NGD SA                 +L Q+GGM GL+ LM  M
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480

Query: 465 GTGKNMMEMVGDGN 478
           G+GK+MM M G G+
Sbjct: 481 GSGKDMMGMFGGGD 494


>AT1G48900.2 | Symbols:  | Signal recognition particle, SRP54
           subunit protein | chr1:18085031-18087743 REVERSE
           LENGTH=431
          Length = 431

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/420 (76%), Positives = 365/420 (86%)

Query: 2   VVLQQLGESISRALQQMSNATMINEKVLNECLNEITRALLQSGVEFELVRDMQTNIKKIV 61
           +VL +LG  I+RA+QQMSN T+I+EK LNECLNEITRALLQS V F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 62  NLDDLTAGHNKRKIFCQAVIDELCKLLDSGKPSHTPKRRKASVVMIVGLQGSGKTTTCTK 121
           NL+DL AGHNKR+I  QA+  ELCK+LD GKP+  PK+ KASVVM VGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 122 YGHYHQKKGWKPALVCADTFRADAFDQLKQNATKAKIPYYGSYIESDPVKIAVEGVERFK 181
           Y +YHQKKG+KPALVCADTFRA AFDQLKQNATKAKIP+YGSY ESDPVKIAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 182 KENCDLIIVDTSGRHKQEAALFEEMRQVLEATKPDLVIFVMDSSIGXXXXXXXXXXXXSV 241
           KENCDLIIVDTSGRHKQEA+LFEEMRQV EATKPDLVIFVMDSSIG            SV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 242 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVEPFVSRLLGMEDL 301
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV+PFVSRLLGM D 
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 302 SGFMDKIQEVVPMDQRHELLQKLSKGIYTLRIMYKQFQNFLEIGPIDQVFSALPCFGSEL 361
           SGF+DK+QEVVP DQ+ ELL+KLS+G +TLRIMY QFQN L +GP+ +VFS LP   +E+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 362 MEKGREKENQAKIKRYMRMMDSMTNEELDTSNPKLMNESRMMRVAQGSGCHVREVVEMLA 421
           M KG EKE+QAKIKRYM MMDSMTN+ELD+SNPK+ NESRMMR+A+GSG  VREV+E+ +
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEICS 420


>AT1G15310.1 | Symbols: ATHSRP54A, SRP54-1 | signal recognition
           particle 54 kDa subunit | chr1:5269173-5271947 REVERSE
           LENGTH=479
          Length = 479

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/473 (69%), Positives = 383/473 (80%), Gaps = 9/473 (1%)

Query: 2   VVLQQLGESISRALQQMSNATMINEKVLNECLNEITRALLQSGVEFELVRDMQTNIKKIV 61
           +VL +LG  I+RA+QQM+N T+I+EKVLN+ LNEITRALLQS V F LV  MQTNIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60

Query: 62  NLDDLTAGHNKRKIFCQAVIDELCKLLDSGKPSHTPKRRKASVVMIVGLQGSGKTTTCTK 121
           NLDDL AGHNKR I  QA+  ELC++LD GKP+  PK+ K SVVM VGLQG+GKTTTCTK
Sbjct: 61  NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120

Query: 122 YGHYHQKKGWKPALVCADTFRADAFDQLKQNATKAKIPYYGSYIESDPVKIAVEGVERFK 181
           Y +YHQKKG+K ALVCADTFRA AFDQLKQNATKAKIP+YGSY ESDPVKIAVEGV+RFK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180

Query: 182 KENCDLIIVDTSGRHKQEAALFEEMRQVLEATKPDLVIFVMDSSIGXXXXXXXXXXXXSV 241
           KE CDLIIVDTSGRHKQ A+LFEEMRQV EAT+PDLVIFVMDSSIG            +V
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240

Query: 242 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVEPFVSRLLGMEDL 301
           +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV+PFVSRLLG  D 
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDW 300

Query: 302 SGFMDKIQEVVPMDQRHELLQKLSKGIYTLRIMYKQFQNFLEIGPIDQVFSALPCFGSEL 361
           SG +DK+QEVVP D ++EL++ LS+G +TLR MY QFQ  L I P++Q+FS LP   +E+
Sbjct: 301 SGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGISAEM 359

Query: 362 MEKGREKENQAKIKRYMRMMDSMTNEELDTSNPKLMNESRMMRVAQGSGCHVREVVEMLA 421
           M KG  +E++ K+KRYM MMDSMTN+ELD+ NPK+ NESR+MR+A+GSG  VREV+EML 
Sbjct: 360 MPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLE 419

Query: 422 EYKYLARMWRKQKGLKSP-NGDFS----ASLLNQLGGMRGLRRLMTPMGTGKN 469
           EYK   R+ +  KG+K P NGD S      +L Q+GGM GL+ LM  MG+ K+
Sbjct: 420 EYK---RIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKD 469


>AT5G49500.1 | Symbols:  | Signal recognition particle, SRP54
           subunit protein | chr5:20077556-20080206 REVERSE
           LENGTH=497
          Length = 497

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/493 (66%), Positives = 383/493 (77%), Gaps = 19/493 (3%)

Query: 2   VVLQQLGESISRALQQMSNATMINEKVLNECLNEITRALLQSGVEFELVRDMQTNIKKIV 61
           +VL +LG  I  A+Q+M+N T+I+EK LN+CLNEITRALLQS V F LV++MQTNIKKIV
Sbjct: 1   MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60

Query: 62  NLDDLTAGHNKRKIFCQAVIDELCKLLDSGKPSHTPKRRKASVVMIVGLQGS--GKTTTC 119
           NL+DL AGHNKR+I  QA+  ELCK+LD GK +  PK+ K SVVM VGLQG    K    
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120

Query: 120 TKYGHYHQKKGWKPALVCADTFRADAFDQLKQNATKAKIPYYGSYIESDPVKIAVEGVER 179
                  ++KG+KPALVCADTFRA AFDQLKQNATK+KIPYYGSY  SDPVKIAVEGV+R
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180

Query: 180 FKKENCDLIIVDTSGRHKQEAALFEEMRQVLEATKPDLVIFVMDSSIGXXXXXXXXXXXX 239
           FKKENCDLIIVDTSGRHKQ+A+LFEEMRQ+ EATKPDLVIFVMDSSIG            
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240

Query: 240 SVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVEPFVSRLLGME 299
           +VAVGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD +PFVSRLLG  
Sbjct: 241 TVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNG 300

Query: 300 DLSGFMDKIQEVVPMDQRHELLQKLSKGIYTLRIMYKQFQNFLEIGPIDQVFSALPCFGS 359
           D+SGF++K+QEVVP DQ+ ELL+ LS G +TLRIMY QFQN L +GP+ +VFS LP   +
Sbjct: 301 DMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRA 360

Query: 360 ELMEKGREKENQAKIKRYMRMMDSMTNEELDTSNPKLMNESRMMRVAQGSGCHVREVVEM 419
           E+M +G EKE+QAKIKRYM MMDSMTNEELD+SNPK+ NESR+MR+A+GSG  VREV+EM
Sbjct: 361 EMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVREVMEM 420

Query: 420 LAEYKYLARMWRKQKGLKS-PNGDFS----------------ASLLNQLGGMRGLRRLMT 462
           L EYK L  MW K KGLK+   G+ S                A +L Q+GGM GL+ LM 
Sbjct: 421 LEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQSLMK 480

Query: 463 PMGTGKNMMEMVG 475
            MG+GK++M M G
Sbjct: 481 QMGSGKDLMGMFG 493


>AT5G03940.1 | Symbols: FFC, 54CP, CPSRP54, SRP54CP | chloroplast
           signal recognition particle 54 kDa subunit |
           chr5:1060265-1063257 REVERSE LENGTH=564
          Length = 564

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 205/419 (48%), Gaps = 6/419 (1%)

Query: 6   QLGESISRALQQMSNATMINEKVLNECLNEITRALLQSGVEFELVRDMQTNIKKIVNLDD 65
           QL   +  A  ++    ++ +  + E + +I RALL++ V   +VR    ++        
Sbjct: 80  QLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGMG 139

Query: 66  LTAGHNKRKIFCQAVIDELCKLLDSGKPSHTPKRRKASVVMIVGLQGSGKTTTCTKYGHY 125
           +  G    +   + V DEL KL+          +   +V+++ GLQG GKTT C K   Y
Sbjct: 140 VIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACY 199

Query: 126 HQKKGWKPALVCADTFRADAFDQLKQNATKAKIPYYGSYIESDPVKIAVEGVERFKKENC 185
            +K+G    L+  D +R  A DQL     +  +P Y +  +  P  IA +G++  KK N 
Sbjct: 200 LKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNV 259

Query: 186 DLIIVDTSGRHKQEAALFEEMRQVLEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGA 245
           D++I+DT+GR + +  + +E++ V +   P  V+ V+D+  G             + +  
Sbjct: 260 DVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITG 319

Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVEPFVSRLLGMEDLSGFM 305
            I+TK+DG ++GG ALS    +  P+  +G GE M++ E F  +    R+LGM D+  F+
Sbjct: 320 AILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFV 379

Query: 306 DKIQEVVPMDQRHELLQKLSKGIYTLRIMYKQFQNFLEIGPIDQVFSALPCFGSELMEKG 365
           +K  EV+  +   +L +K+    +      KQ +   ++G + +V   +P  G     + 
Sbjct: 380 EKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQI 439

Query: 366 REKENQAKIKRYMRMMDSMTNEELDTSNPKLMNES--RMMRVAQGSGCHVREVVEMLAE 422
           RE E    +     M++ MT EE +   P+L+ ES  R  R+A+ SG   ++V  ++A+
Sbjct: 440 REAEKNLLVMEA--MIEVMTPEERE--RPELLAESPERRKRIAKDSGKTEQQVSALVAQ 494


>AT5G66970.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:26740445-26741125
           REVERSE LENGTH=175
          Length = 175

 Score =  116 bits (290), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 98/164 (59%), Gaps = 3/164 (1%)

Query: 2   VVLQQLGESISRALQQMSNATMINEKVLNECLNEITRALLQSGVEFELVRDMQTNIKKIV 61
           + L+++   I R+ ++M+  + ++   L  CLNEIT ALL + +    V +++T   +I+
Sbjct: 1   MALEEVRGRIGRSFEEMNKTSNMDCTKLKSCLNEITCALLDADIPRLAVDEIETKSLEII 60

Query: 62  NLDDLTAGHNKRKIFCQAVIDELCKLLDSGKPSHTPKRRKASVVMIVGLQGSGKTTTCTK 121
           NL    A   K  +    ++ EL   LD GK +    + + S+VM +GL+G  KT TC K
Sbjct: 61  NLPK--APKKKGALIYMMMLQELSSKLDPGKSALIRGKLEPSIVMFIGLRGVDKTKTCAK 118

Query: 122 YGHYHQKKGWKPALVCADTFRADAFDQLKQNATKAKIPYYGSYI 165
           Y  YH+KKG++PALVCADTF+ DAF +L + A K ++P Y  YI
Sbjct: 119 YARYHRKKGFRPALVCADTFKFDAFVRLNK-AAKDEVPVYARYI 161


>AT2G45770.1 | Symbols: CPFTSY, FRD4 | signal recognition particle
           receptor protein, chloroplast (FTSY) |
           chr2:18851248-18853402 FORWARD LENGTH=366
          Length = 366

 Score =  115 bits (287), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 20/293 (6%)

Query: 20  NATMINEKVL-------NECLNEITRALLQSGVEFELVRDMQTNIKKIVNLDDLTAGHNK 72
           N  +I+E +L       +  L+E+  ALL S    ++   +   +++ +    L +G   
Sbjct: 77  NLAVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEI 136

Query: 73  RKIFCQAVIDELCKLLDSGKPSHTPKRRKASVVMIVGLQGSGKTTTCTKYGHYHQKKGWK 132
           +    ++V++ L K   + K       RK +V+MIVG+ G GKTT+  K  H  + +G K
Sbjct: 137 KDALKESVLEMLAK--KNSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTK 194

Query: 133 PALVCADTFRADAFDQLKQNATKAKIPYYGSYIESDPVKIAV---EGVERFKKENCDLII 189
             +   DTFRA A DQL+  A +          E D  K A    + V+R K+E  D+++
Sbjct: 195 VLMAAGDTFRAAASDQLEIWAERTGCEIV--VAEGDKAKAATVLSKAVKRGKEEGYDVVL 252

Query: 190 VDTSGRHKQEAALFEEMRQVLEAT------KPDLVIFVMDSSIGXXXXXXXXXXXXSVAV 243
            DTSGR     +L EE+    +A        P+ ++ V+D + G             V +
Sbjct: 253 CDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGI 312

Query: 244 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVEPFVSRLL 296
             +I+TK+DG A+GG  +S V     PV FIG GE +++ + FD E FV+ + 
Sbjct: 313 TGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNAIF 365


>AT2G45770.2 | Symbols: CPFTSY | signal recognition particle
           receptor protein, chloroplast (FTSY) |
           chr2:18851248-18853402 FORWARD LENGTH=373
          Length = 373

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 27/300 (9%)

Query: 20  NATMINEKVL-------NECLNEITRALLQSGVEFELVRDMQTNIKKIVNLDDLTAGHNK 72
           N  +I+E +L       +  L+E+  ALL S    ++   +   +++ +    L +G   
Sbjct: 77  NLAVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEI 136

Query: 73  RKIFCQAVIDELCKLLDSGKPSHTPKRRKASVVMIVGLQGSGKTTTCT-------KYGHY 125
           +    ++V++ L K   + K       RK +V+MIVG+ G GKTT+         K  H 
Sbjct: 137 KDALKESVLEMLAK--KNSKTELQLGFRKPAVIMIVGVNGGGKTTSLDSGFCFSGKLAHR 194

Query: 126 HQKKGWKPALVCADTFRADAFDQLKQNATKAKIPYYGSYIESDPVKIAV---EGVERFKK 182
            + +G K  +   DTFRA A DQL+  A +          E D  K A    + V+R K+
Sbjct: 195 LKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIV--VAEGDKAKAATVLSKAVKRGKE 252

Query: 183 ENCDLIIVDTSGRHKQEAALFEEMRQVLEAT------KPDLVIFVMDSSIGXXXXXXXXX 236
           E  D+++ DTSGR     +L EE+    +A        P+ ++ V+D + G         
Sbjct: 253 EGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQARE 312

Query: 237 XXXSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVEPFVSRLL 296
               V +  +I+TK+DG A+GG  +S V     PV FIG GE +++ + FD E FV+ + 
Sbjct: 313 FNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNAIF 372


>AT4G30600.1 | Symbols:  | signal recognition particle receptor
           alpha subunit family protein | chr4:14938142-14940600
           REVERSE LENGTH=634
          Length = 634

 Score = 92.0 bits (227), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)

Query: 115 KTTTCTKYGHYHQKKGWKPALVCADTFRADAFDQLKQNATKAKIPYYGSYIESDPVKIAV 174
           K+T   K  ++ Q+      +   DTFR+ A +QL+ +A + +IP +    E DP  +A 
Sbjct: 441 KSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 500

Query: 175 EGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVLEATKPDLVIFVMDSSIGXXXXXXX 234
           E ++   +   D+++VDT+GR +    L   + +++   +PDLV+FV ++ +G       
Sbjct: 501 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNQPDLVLFVGEALVGNDAVDQL 560

Query: 235 XXXXXSVA----------VGAVIVTKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEF 283
                 ++          +  +++TK D    K G ALS V  + SPV+F+G G+   + 
Sbjct: 561 SKFNQKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDL 620

Query: 284 EVFDVEPFVSRLL 296
           +  +V+  V  LL
Sbjct: 621 KKLNVKAIVKTLL 633