Miyakogusa Predicted Gene

Lj4g3v0510110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0510110.1 Non Chatacterized Hit- tr|G7JNP6|G7JNP6_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,94.78,0,no
description,HAD-like domain; HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459
family,HAD-superfamily hyd,CUFF.47532.1
         (249 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10460.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   336   1e-92

>AT5G10460.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr5:3287822-3289844 FORWARD
           LENGTH=306
          Length = 306

 Score =  336 bits (861), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/236 (67%), Positives = 193/236 (81%)

Query: 14  TLEKVKSLGFDASLFLGAITSGELTHQYLQRRDDLWFAALGRSCIHFTWSGRGAISLEGL 73
           T+EK+K LGFD S F GAITSGELTHQ LQRRDD WFAALGR CIH TW+ RGAISLEGL
Sbjct: 71  TMEKLKGLGFDPSFFTGAITSGELTHQSLQRRDDPWFAALGRRCIHITWNDRGAISLEGL 130

Query: 74  DLQVVEKVEEAEFVLAHGTEALGDANGNARSMKLEDLERILELCAAKRIPMVVANPDYVT 133
           DL VVE VEEA+FVLAHGTEALG  +G+     +++LE+ILE  AA+ +PM+VANPDYVT
Sbjct: 131 DLNVVENVEEADFVLAHGTEALGLPSGSVSPRTIDELEKILEKSAARGLPMIVANPDYVT 190

Query: 134 VEARELRVMPGTLAAKYEKLGGEVKWMGKPDEIIYKSAMAMAGTDVSDCIAVGDSLHHDI 193
           VEA    +MPGTLA+KYE+LGGEVK MGKP ++IY+SA+A+AG + S+ IAVGDSLHHDI
Sbjct: 191 VEANVFHIMPGTLASKYEELGGEVKSMGKPHKMIYESAIAIAGVNPSESIAVGDSLHHDI 250

Query: 194 KGANAAGIKSIFITGGIHATELGLHGFGEVANSSSVESLATKYDAYPSYVLPAFTW 249
           +GAN +GI+SIFITGGIH  ELGL  F E A+  SV++L  K++A+P+YVL AF W
Sbjct: 251 RGANVSGIESIFITGGIHGNELGLTSFDETASLDSVKTLTAKHNAFPTYVLSAFKW 306