Miyakogusa Predicted Gene

Lj4g3v0506920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0506920.1 Non Chatacterized Hit- tr|I1KLT6|I1KLT6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33268 PE,68.44,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; no de,CUFF.47524.1
         (274 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68810.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   121   6e-28
AT3G25710.1 | Symbols: BHLH32, ATAIG1, TMO5 | basic helix-loop-h...   104   5e-23
AT3G56770.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   102   4e-22
AT2G40200.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    98   7e-21
AT2G41130.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    97   1e-20
AT4G38070.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    68   8e-12
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |...    53   2e-07
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran...    50   2e-06
AT5G46760.1 | Symbols:  | Basic helix-loop-helix (bHLH) DNA-bind...    48   6e-06

>AT1G68810.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:25861289-25862882 FORWARD
           LENGTH=368
          Length = 368

 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 118/188 (62%), Gaps = 5/188 (2%)

Query: 72  EAKALAALKSHSEAXXXXXXXINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKAV 131
           +AKALAA KSHSEA       IN HLA LR ++P+T K DKA+LL EVI  VKELK++  
Sbjct: 168 DAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETS 227

Query: 132 EASKGLLIPTDSDEVKVELCDNGEENES-ISYMATVCSDYQSEILSDLKQTLDALQLQLV 190
             S+  L+PT+SDE+ V   +  E  +      A++C + +S++L D+ +TL A++L+ +
Sbjct: 228 VISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTL 287

Query: 191 KAELSTLGERMKNVFVFTCCKRENVNIEACQALASNVHQALGSVLEKASNALEFSFRASD 250
           KAE++T+G R+KNV   T  +     +E    + + + +AL +V+EK SN  E S  +S 
Sbjct: 288 KAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGT-IEEALKAVMEK-SNVEESS--SSG 343

Query: 251 RCKRRRLS 258
             KR+R+S
Sbjct: 344 NAKRQRMS 351


>AT3G25710.1 | Symbols: BHLH32, ATAIG1, TMO5 | basic
           helix-loop-helix 32 | chr3:9369598-9371096 FORWARD
           LENGTH=344
          Length = 344

 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 1/137 (0%)

Query: 72  EAKALAALKSHSEAXXXXXXXINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKAV 131
           +AKALAA KSHSEA       IN HLA LR ++P+T K DKA+LL EVI  +KELK++  
Sbjct: 126 DAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTS 185

Query: 132 EASKGLLIPTDSDEVKVELCDNGEENESISYMATVCSDYQSEILSDLKQTLDALQLQLVK 191
           + +    +PT+ D++ V+   N EE   +   +  C D +++++ D+   L +L+L+ +K
Sbjct: 186 QITDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQD-RTDLMHDVINALKSLRLRTLK 244

Query: 192 AELSTLGERMKNVFVFT 208
           AE++T+G R+KN+   +
Sbjct: 245 AEIATVGGRVKNILFLS 261


>AT3G56770.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr3:21029202-21030618 REVERSE
           LENGTH=230
          Length = 230

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 13/191 (6%)

Query: 72  EAKALAALKSHSEAXXXXXXXINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKAV 131
           E KALA+L++H EA       IN HL  LR L+    K DK+TLL +V+ +VKELK++ +
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTL 98

Query: 132 EASKGLLIPTDSDEVKV---ELCDNGEENESISYMATVCSDYQSEILSDLKQTLDALQLQ 188
           E +    IP+++DE+ V   E C  G++   I  ++  C D + E+L DL +TL +LQ++
Sbjct: 99  EITDE-TIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCED-RPELLKDLMETLKSLQME 156

Query: 189 LVKAELSTLGERMKNVFVFTCCKRENVNIEACQALASNVHQALGSVLEKASNAL---EFS 245
            + A+++T+G R +NV V    K E+  +++   L      AL S+LE++S ++      
Sbjct: 157 TLFADMTTVGGRTRNVLVVAADK-EHHGVQSVNFL----QNALKSLLERSSKSVMVGHGG 211

Query: 246 FRASDRCKRRR 256
               +R KRRR
Sbjct: 212 GGGEERLKRRR 222


>AT2G40200.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:16791098-16792027 FORWARD
           LENGTH=254
          Length = 254

 Score = 97.8 bits (242), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 9/169 (5%)

Query: 74  KALAALKSHSEAXXXXXXXINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKAVEA 133
           KA +  +SH  A       IN HL  LR LVP+++K+DKA LL  VI QVKELK+KA E+
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 134 SKGLLIPTDSDEVKVE---LCDNGEENESISYMATVCSDYQSEILSDLKQTLDALQLQLV 190
                +PT++DEV V+   + D      +I + A+ C + Q E +S++ + L  LQL+ +
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 191 KAELSTLGERMKNVFVF--TCCKRENVNIEACQALASNVHQALGSVLEK 237
           +AE+ ++G RM+  F+   + C  E  NI A    A  + Q+L S L +
Sbjct: 179 QAEIISVGGRMRINFILKDSNCN-ETTNIAAS---AKALKQSLCSALNR 223


>AT2G41130.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:17143360-17144686 FORWARD
           LENGTH=253
          Length = 253

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 104/174 (59%), Gaps = 7/174 (4%)

Query: 71  SEAKALAALKSHSEAXXXXXXXINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKA 130
           ++ +ALAAL++H EA       IN HL  LR ++    K DKATLL +V+ +V+ELK++ 
Sbjct: 60  AQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQT 119

Query: 131 VEASKG--LLIPTDSDEVKVELCDNGEENESISYMATVCSDYQSEILSDLKQTLDALQLQ 188
           +E S     L+P+++DE+ V    +   +  I + A++C + +S++L DL + L +L ++
Sbjct: 120 LETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMK 179

Query: 189 LVKAELSTLGERMKNVFVFTCCKRENVNIEACQALASNVHQALGSVLEKASNAL 242
            ++AE+ T+G R ++V V     +E   +E+   L      AL S+LE++S +L
Sbjct: 180 TLRAEMVTIGGRTRSVLV-VAADKEMHGVESVHFL----QNALKSLLERSSKSL 228


>AT4G38070.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
            superfamily protein | chr4:17876535-17882569 FORWARD
            LENGTH=1513
          Length = 1513

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 14/153 (9%)

Query: 56   AAATANKVG------TGKNEHSEAKALAALKSHSEAXXXXXXXINGHLATLRGLVPSTEK 109
             AAT++K+       T     +E+K +AA K HS+A       IN   ATLR ++P+  K
Sbjct: 1322 GAATSSKLFSRGFSVTKPKSKTESKEVAA-KKHSDAERRRRLRINSQFATLRTILPNLVK 1380

Query: 110  MDKATLLGEVISQVKELKKKAVEASKGLLIPTDSDEVKVELCDNGEENESISYMATVCSD 169
             DKA++LGE +    ELKK   +       P+  D ++++ C+N   N  ++ +   CSD
Sbjct: 1381 QDKASVLGETVRYFNELKKMVQDIP---TTPSLEDNLRLDHCNN---NRDLARVVFSCSD 1434

Query: 170  YQSEILSDLKQTLDALQLQLVKAELSTLGERMK 202
             +  ++S++ +++ A++ + V+AE+ T+G R K
Sbjct: 1435 REG-LMSEVAESMKAVKAKAVRAEIMTVGGRTK 1466


>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
           Basic helix-loop-helix (bHLH) DNA-binding family protein
           | chr1:11799042-11800913 REVERSE LENGTH=623
          Length = 623

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 82  HSEAXXXXXXXINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKAVEA-SKGLLIP 140
           H EA       +N     LR +VP+  KMDKA+LLG+ I+ + ELK K V+  S+ L I 
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIK 512

Query: 141 TDSDEVKVELC 151
              +EVK+EL 
Sbjct: 513 NQLEEVKLELA 523


>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
           transcription factor | chr2:19091187-19092887 REVERSE
           LENGTH=566
          Length = 566

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 15/136 (11%)

Query: 82  HSEAXXXXXXXINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKA-------VEAS 134
           H EA       +N     LR +VP+  KMDKA+LLG+ IS +KEL++K        V   
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTD 455

Query: 135 KGLLIPTDSDEVKVE---LCDNGEENESISYMATVCSDYQSEILSDLKQTLDALQLQLVK 191
           K L   ++S+ + VE     D    NE +  +  V S   S   S + Q +    + L++
Sbjct: 456 KSL---SESNTITVEESPEVDIQAMNEEV--VVRVISPLDSHPASRIIQAMRNSNVSLME 510

Query: 192 AELSTLGERMKNVFVF 207
           A+LS   + M + FV 
Sbjct: 511 AKLSLAEDTMFHTFVI 526


>AT5G46760.1 | Symbols:  | Basic helix-loop-helix (bHLH) DNA-binding
           family protein | chr5:18974231-18976009 FORWARD
           LENGTH=592
          Length = 592

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 6/69 (8%)

Query: 82  HSEAXXXXXXXINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKAVEASKGLLIPT 141
           H EA       +N    +LR +VP+  KMDKA+LLG+ IS + ELK K  +A       +
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAE------S 469

Query: 142 DSDEVKVEL 150
           D +E++ +L
Sbjct: 470 DKEEIQKKL 478