Miyakogusa Predicted Gene

Lj4g3v0496560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0496560.1 Non Chatacterized Hit- tr|I3S1J1|I3S1J1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.72,0,Nucleotide-diphospho-sugar transferases,NULL; no
description,NULL; GLYCOSYL TRANSFERASE,NULL; Glycos,CUFF.47498.1
         (235 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G20575.1 | Symbols:  | Nucleotide-diphospho-sugar transferase...   425   e-119
AT2G39630.1 | Symbols:  | Nucleotide-diphospho-sugar transferase...    65   3e-11
AT2G39630.2 | Symbols:  | Nucleotide-diphospho-sugar transferase...    58   6e-09

>AT1G20575.1 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr1:7126987-7128677 REVERSE
           LENGTH=246
          Length = 246

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/233 (86%), Positives = 221/233 (94%)

Query: 3   EQHQKDKDKYSIIVPTYNERLNIGLIVYLLFKHLRDVDFEIIVVDDGSPDGTQDVVKQLQ 62
           E   + K KYSII+PTYNERLNI +IVYL+FKHLRDVDFEIIVVDDGSPDGTQ++VKQLQ
Sbjct: 6   ETKGEKKYKYSIIIPTYNERLNIAIIVYLIFKHLRDVDFEIIVVDDGSPDGTQEIVKQLQ 65

Query: 63  KVYGEDRILLRARPRKLGLGTAYIHGMKHASGNFVVIMDADLSHHPKYLPSFIRKQKETG 122
           ++YGEDRILLRAR +KLGLGTAYIHG+KHA+G+FVVIMDADLSHHPKYLPSFI+KQ ET 
Sbjct: 66  QLYGEDRILLRARAKKLGLGTAYIHGLKHATGDFVVIMDADLSHHPKYLPSFIKKQLETN 125

Query: 123 ADIVTGTRYVKGGGVHGWTLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYRKSALEDII 182
           A IVTGTRYVKGGGVHGW LMRKLTSRGANVLAQTLLWPGVSDLTGSFRLY+KSALED+I
Sbjct: 126 ASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSALEDVI 185

Query: 183 SRCVTKGYVFQMEMIVRASRKGYHIEEVPITFVDRVYGSSKLGGSEIVQYLKG 235
           S CV+KGYVFQMEMIVRA+RKGYHIEEVPITFVDRV+G+SKLGGSEIV+YLKG
Sbjct: 186 SSCVSKGYVFQMEMIVRATRKGYHIEEVPITFVDRVFGTSKLGGSEIVEYLKG 238


>AT2G39630.1 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr2:16522008-16524561 REVERSE
           LENGTH=336
          Length = 336

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 37/250 (14%)

Query: 10  DKY-SIIVPTYNERLNIGLIVYLLFKHLRD-------VDFEIIVVDDGSPDGTQDVVKQL 61
           +KY S+IVP YNE L +   +     +L+D         FE+++VDDGS DGT+ V    
Sbjct: 65  EKYLSLIVPAYNEELRLPAALEETMDYLQDRASRDKSFSFEVVIVDDGSVDGTKRVAFDF 124

Query: 62  QKVYGEDRILLRARPRKLGLGTAYIHGMKHASGNFVVIMDADLSHHPKYLPSF------- 114
            + Y  D I +    +  G G A   GM H+ G  ++++DAD +     L          
Sbjct: 125 IRKYTIDNIRVIPLGKNQGKGEAIRKGMLHSRGQLLLMLDADGATKVTDLEKLENQINAV 184

Query: 115 ------IRKQKETGADIVTGTRYVKGGGVHGWTLMRKLTSR---------GANVLAQTLL 159
                 IR       D   G   V   G       + L +R         G +++     
Sbjct: 185 AREEYSIRNPASKDMDFKIGDVQVSAFGSRAHLEEKALATRKWYRNFLMKGFHLVVLLAA 244

Query: 160 WPGVSDLTGSFRLYRKSALEDIISRCVTKGYVFQMEMIVRASRKGYHIEEVPITFVDRVY 219
            PG+ D    F+++ ++A   + +    K + F +E++    R    + E+ + +     
Sbjct: 245 GPGIRDTQCGFKMFTRAAARRLFTNVHLKRWCFDVELVYLCKRFNIPMVEISVKW----- 299

Query: 220 GSSKLGGSEI 229
             S++ GS++
Sbjct: 300 --SEIPGSKV 307


>AT2G39630.2 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr2:16522497-16524561 REVERSE
           LENGTH=236
          Length = 236

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 8/102 (7%)

Query: 10  DKY-SIIVPTYNERLNIGLIVYLLFKHLRD-------VDFEIIVVDDGSPDGTQDVVKQL 61
           +KY S+IVP YNE L +   +     +L+D         FE+++VDDGS DGT+ V    
Sbjct: 65  EKYLSLIVPAYNEELRLPAALEETMDYLQDRASRDKSFSFEVVIVDDGSVDGTKRVAFDF 124

Query: 62  QKVYGEDRILLRARPRKLGLGTAYIHGMKHASGNFVVIMDAD 103
            + Y  D I +    +  G G A   GM H+ G  ++++DAD
Sbjct: 125 IRKYTIDNIRVIPLGKNQGKGEAIRKGMLHSRGQLLLMLDAD 166