Miyakogusa Predicted Gene

Lj4g3v0486340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0486340.1 tr|B5X267|B5X267_SALSA 28 kDa heat-and
acid-stable phosphoprotein OS=Salmo salar GN=HAP28 PE=2
SV=1,44.9,4e-19,seg,NULL; 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN
(PDGF-ASSOCIATED PROTEIN),NULL; PP28,Casein ki,CUFF.47484.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46020.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Casein kin...   153   4e-38

>AT5G46020.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Casein kinase
           substrate, phosphoprotein PP28 (InterPro:IPR019380); Has
           30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr5:18663075-18664629
           REVERSE LENGTH=164
          Length = 164

 Score =  153 bits (387), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 82/140 (58%), Positives = 98/140 (70%), Gaps = 3/140 (2%)

Query: 1   MGRGKFKAKPTGRRQFSTPEDMLAGTST-RPRTFKQXXXXXXXXXXXXXXXXXXXXXXXX 59
           MGRGKFK KPTG+R+FS+  D+LAGTS  RPR+FKQ                        
Sbjct: 1   MGRGKFKGKPTGQRRFSSAADILAGTSAARPRSFKQKEAEYEEDVEEESEEESEEESEDE 60

Query: 60  XXXXX--XQGVIEIENPNLVKPKSLKARDVDLEKTTELSRREREEIEKQRAHERYMRLQE 117
                   + VIE++NPN V+ K+LKA+D+D  KTTELSRREREE+EKQRAHERYMRLQE
Sbjct: 61  ADVKKKGAEAVIEVDNPNRVRQKTLKAKDLDASKTTELSRREREELEKQRAHERYMRLQE 120

Query: 118 QGKTEQSKKDLERLALIRQQ 137
           QGKTEQ++KDL+RLALIRQQ
Sbjct: 121 QGKTEQARKDLDRLALIRQQ 140