Miyakogusa Predicted Gene
- Lj4g3v0486320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0486320.1 tr|A7RXA0|A7RXA0_NEMVE Predicted protein
OS=Nematostella vectensis GN=v1g163771 PE=4 SV=1,51.22,1e-18,seg,NULL;
Zinc beta-ribbon,NULL; Elf1,Transcription elongation factor 1;
SUBFAMILY NOT NAMED,NULL; U,CUFF.47482.1
(88 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46030.1 | Symbols: | unknown protein; CONTAINS InterPro DOM... 127 2e-30
>AT5G46030.1 | Symbols: | unknown protein; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF701,
zinc-binding putative (InterPro:IPR007808); Has 30201
Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink). | chr5:18670531-18671138 FORWARD
LENGTH=120
Length = 120
Score = 127 bits (319), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 66/82 (80%)
Query: 1 MGXXXXXXXXXXXXXMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTI 60
MG MDKLDT+FSCPFCNHGSSVEC IDMK+LIG+A+C IC+ESFSTTI
Sbjct: 1 MGKRKSRAKPAPTKRMDKLDTIFSCPFCNHGSSVECIIDMKHLIGKAACRICEESFSTTI 60
Query: 61 TALSEAIDIYSEWIDECERVNN 82
TAL+EAIDIYSEWIDECERVN
Sbjct: 61 TALTEAIDIYSEWIDECERVNT 82